The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_AP014547	Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300	4978382	1816266	1821912	4978382	integrase	Mycobacterium_phage(83.33%)	8	1812599:1812613	1820869:1820883
1812599:1812613	attL	ATCAATTCGGCATCC	NA	NA	NA	NA
WP_005137005.1|1816266_1817373_+|integrase	site-specific integrase	integrase	A0A2P1JS61	Mycobacterium_phage	55.1	7.6e-108
WP_005137006.1|1817369_1818143_-	DUF732 domain-containing protein	NA	NA	NA	NA	NA
WP_005137008.1|1818403_1818781_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005137010.1|1818819_1819842_-	acyltransferase	NA	A9YX16	Burkholderia_phage	30.0	1.1e-25
WP_024571065.1|1820077_1820809_+	hypothetical protein	NA	A0A068F4L5	Mycobacterium_phage	53.4	1.3e-60
WP_024571066.1|1820786_1821140_-	helix-turn-helix transcriptional regulator	NA	A0A1C9M0W4	Mycobacterium_phage	49.0	1.3e-21
1820869:1820883	attR	ATCAATTCGGCATCC	NA	NA	NA	NA
WP_005067362.1|1821379_1821616_+	helix-turn-helix transcriptional regulator	NA	A0A1C9M042	Mycobacterium_phage	69.3	6.0e-23
WP_005137013.1|1821612_1821912_+	hypothetical protein	NA	A0A220NS49	Mycobacterium_phage	35.8	5.9e-07
>prophage 2
NZ_AP014547	Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300	4978382	1825504	1877749	4978382	tail,portal	Mycobacterium_phage(75.51%)	66	NA	NA
WP_005067369.1|1825504_1825822_+	hypothetical protein	NA	A0A1J0MDS6	Mycobacterium_phage	37.0	9.7e-08
WP_005137029.1|1825818_1826709_+	ATP-binding protein	NA	G1BSI6	Mycobacterium_virus	81.6	1.9e-138
WP_005067371.1|1826920_1827127_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024571068.1|1827123_1827834_+	hypothetical protein	NA	G1D0U2	Mycobacterium_virus	33.3	4.4e-24
WP_078061975.1|1827974_1828592_+	site-specific DNA-methyltransferase	NA	A0A142KC68	Gordonia_phage	38.6	4.3e-28
WP_005137034.1|1828734_1829115_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005137037.1|1829111_1829399_+	hypothetical protein	NA	NA	NA	NA	NA
WP_131526252.1|1829762_1830506_+	hypothetical protein	NA	A0A097EYS9	Mycobacterium_phage	67.9	2.7e-48
WP_005067376.1|1830502_1830856_+	hypothetical protein	NA	A0A2L0HJY8	Mycobacterium_phage	56.2	1.2e-27
WP_074359886.1|1832287_1833070_+	hypothetical protein	NA	A0A2D1GG45	Gordonia_phage	47.5	2.2e-16
WP_032670028.1|1833299_1833518_+	hypothetical protein	NA	G1JX72	Mycobacterium_phage	47.4	2.1e-09
WP_005067380.1|1833514_1833844_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024571072.1|1834511_1834760_+	WhiB family transcriptional regulator	NA	A0A097EWF7	Mycobacterium_phage	50.0	4.1e-14
WP_024571073.1|1834759_1835074_+	WhiB family transcriptional regulator	NA	A0A1B0XUI6	Freshwater_phage	50.0	5.2e-14
WP_005137042.1|1835112_1835289_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005067383.1|1835285_1835480_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005067385.1|1835518_1835761_+	hypothetical protein	NA	G1D3X4	Mycobacterium_virus	51.6	8.7e-09
WP_005137043.1|1836082_1836364_+	hypothetical protein	NA	G1BSK4	Mycobacterium_virus	45.1	2.2e-16
WP_005137046.1|1836530_1837214_+	hypothetical protein	NA	A0A2L0HK00	Mycobacterium_phage	46.2	8.4e-49
WP_005067387.1|1837260_1838046_+	nucleotidyltransferase domain-containing protein	NA	A0A2P1A0V3	Gordonia_phage	54.5	2.5e-73
WP_005067388.1|1838047_1838248_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005067389.1|1838319_1838598_+	hypothetical protein	NA	A0A088FQJ6	Mycobacterium_phage	51.2	2.9e-16
WP_005067390.1|1838594_1839047_+	hypothetical protein	NA	A0A2P1JZV1	Mycobacterium_phage	47.8	4.4e-06
WP_005137049.1|1839325_1839475_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005067391.1|1839477_1839762_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024571076.1|1840156_1840501_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012296468.1|1840539_1840776_+	hypothetical protein	NA	A0A088FBL5	Mycobacterium_phage	92.3	2.6e-05
WP_005067393.1|1841295_1841667_+	hypothetical protein	NA	A0A2D1GAQ7	Mycobacterium_phage	34.6	1.5e-07
WP_005137054.1|1841957_1842239_-	DUF732 domain-containing protein	NA	NA	NA	NA	NA
WP_005067396.1|1842368_1843631_+	glycosyltransferase	NA	G8I6V8	Mycobacterium_virus	70.3	2.2e-66
WP_005067397.1|1843637_1844459_+	hypothetical protein	NA	A0A2D1GAR3	Mycobacterium_phage	56.2	1.3e-83
WP_024571077.1|1844455_1845151_+	hypothetical protein	NA	A0A0A1ENE4	Mycobacterium_phage	71.7	1.0e-89
WP_005067399.1|1845150_1845396_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005067400.1|1845395_1845812_+	hypothetical protein	NA	A0A068F2M6	Mycobacterium_phage	49.6	1.4e-22
WP_024571079.1|1846749_1847034_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024571080.1|1847017_1847365_+	HNH endonuclease	NA	G1BSJ4	Mycobacterium_virus	42.4	9.9e-06
WP_131526253.1|1847533_1848145_+	hypothetical protein	NA	A0A162E1R7	Tsukamurella_phage	32.4	4.7e-11
WP_024571082.1|1848145_1849798_+	hypothetical protein	NA	A0A0S1S0L0	Mycobacterium_phage	59.2	5.3e-198
WP_024571083.1|1849816_1851181_+|portal	phage portal protein	portal	A0A1C9LZY2	Mycobacterium_phage	67.4	2.7e-171
WP_024571084.1|1851231_1851852_+	hypothetical protein	NA	A0A088FVU5	Mycobacterium_phage	46.1	4.1e-26
WP_005067409.1|1851867_1852698_+	hypothetical protein	NA	A0A0A0RSP1	Mycobacterium_phage	58.7	4.5e-81
WP_005137062.1|1852697_1853270_+	hypothetical protein	NA	A0A1C9M013	Mycobacterium_phage	51.1	2.9e-42
WP_005110307.1|1853368_1853602_+	hypothetical protein	NA	G8I4C3	Mycobacterium_phage	40.0	8.9e-11
WP_024571085.1|1853601_1853868_+	hypothetical protein	NA	A0A068F3C1	Mycobacterium_phage	51.2	4.0e-15
WP_005067416.1|1853867_1854245_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005067417.1|1854311_1854899_+	hypothetical protein	NA	A0A068F8K4	Mycobacterium_phage	67.2	1.6e-69
WP_005137063.1|1854993_1855260_+	hypothetical protein	NA	A0A068F4G7	Mycobacterium_phage	43.5	3.8e-13
WP_005067420.1|1855376_1855688_+	hypothetical protein	NA	A0A068F4G7	Mycobacterium_phage	43.7	4.0e-14
WP_005137064.1|1855698_1859712_+|tail	phage tail tape measure protein	tail	A0A068F1L4	Mycobacterium_phage	54.5	1.5e-275
WP_024571086.1|1859715_1860825_+	hypothetical protein	NA	A0A068F3C3	Mycobacterium_phage	67.9	4.9e-155
WP_005067424.1|1860827_1862624_+	hypothetical protein	NA	A0A068F4H3	Mycobacterium_phage	63.2	3.1e-236
WP_005067425.1|1862719_1863157_+	hypothetical protein	NA	A0A068F2D2	Mycobacterium_phage	51.8	1.7e-34
WP_005067426.1|1863149_1864235_+	hypothetical protein	NA	A0A068F8L3	Mycobacterium_phage	67.8	1.4e-151
WP_005067428.1|1864234_1868350_+	serine hydrolase	NA	A0A0K1LLJ4	Mycobacterium_phage	40.3	2.3e-149
WP_005137067.1|1868360_1868759_+	hypothetical protein	NA	A0A0U1UNR7	Pseudomonas_phage	48.9	5.6e-29
WP_005137068.1|1869019_1870159_+	hypothetical protein	NA	G3MDN1	Mycobacterium_phage	46.3	4.5e-31
WP_005067432.1|1870174_1870606_+	hypothetical protein	NA	A0A2P1JR64	Mycobacterium_phage	80.4	2.1e-58
WP_005137072.1|1870862_1872308_+	M15 family metallopeptidase	NA	A0A2P1CEK6	Mycobacterium_phage	63.3	6.3e-163
WP_005067435.1|1872310_1872751_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005067437.1|1872801_1873716_+	cutinase family protein	NA	A0A2D1GJ74	Mycobacterium_phage	54.3	6.5e-89
WP_005067438.1|1874066_1875194_+	hypothetical protein	NA	S5W0N6	Mycobacterium_phage	57.8	1.7e-118
WP_005137074.1|1875219_1875519_+	hypothetical protein	NA	A0A222ZPK3	Mycobacterium_phage	41.1	5.3e-08
WP_005067440.1|1875554_1875917_+	hypothetical protein	NA	A0A222ZMV8	Mycobacterium_phage	53.8	7.1e-23
WP_131526254.1|1875955_1876240_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005067441.1|1876318_1876558_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005067442.1|1876573_1877749_-	hypothetical protein	NA	G8I4U5	Mycobacterium_phage	47.3	1.5e-34
>prophage 3
NZ_AP014547	Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300	4978382	2545792	2562528	4978382	integrase,transposase	Leptospira_phage(100.0%)	12	2550838:2550855	2559439:2559456
WP_005068399.1|2545792_2547844_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_024571248.1|2547840_2548596_-|transposase	TnsA-like heteromeric transposase endonuclease subunit	transposase	NA	NA	NA	NA
WP_005068404.1|2549189_2550311_+|integrase	tyrosine-type recombinase/integrase	integrase	S5W9T9	Leptospira_phage	21.0	2.3e-11
WP_024571249.1|2550303_2550669_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
2550838:2550855	attL	GTTCTCATTTGATCTGTC	NA	NA	NA	NA
WP_005068407.1|2552101_2552260_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005137354.1|2554718_2555492_-	TniQ family protein	NA	NA	NA	NA	NA
WP_005068412.1|2555557_2556607_-	TniB family NTP-binding protein	NA	NA	NA	NA	NA
WP_005093426.1|2556594_2558667_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_076984159.1|2558663_2559311_-|transposase	TnsA-like heteromeric transposase endonuclease subunit	transposase	NA	NA	NA	NA
WP_005068419.1|2559662_2560889_+	hypothetical protein	NA	NA	NA	NA	NA
2559439:2559456	attR	GACAGATCAAATGAGAAC	NA	NA	NA	NA
WP_005068421.1|2560965_2561190_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005068424.1|2561265_2562528_+|transposase	IS256 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_AP014547	Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300	4978382	2850204	2858742	4978382		Streptococcus_phage(16.67%)	7	NA	NA
WP_005068898.1|2850204_2850876_-	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	31.1	4.9e-17
WP_005057567.1|2850989_2851913_+	peptidylprolyl isomerase	NA	A0A1V0SCU1	Indivirus	31.6	1.1e-08
WP_005068900.1|2851914_2852784_+	class A beta-lactamase	NA	A0A1B0VBP7	Salmonella_phage	46.0	1.5e-55
WP_005068903.1|2852885_2855252_-	RelA/SpoT family protein	NA	A0A291L9W9	Bordetella_phage	38.4	1.8e-13
WP_005068905.1|2855282_2855816_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	36.4	1.1e-14
WP_005137446.1|2855812_2857489_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005068908.1|2857488_2858742_-	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	28.6	1.5e-22
>prophage 5
NZ_AP014547	Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300	4978382	3962816	3974346	4978382		Mycobacterium_phage(58.33%)	19	NA	NA
WP_005061616.1|3962816_3963647_-	NAD(P)-dependent oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	29.1	5.7e-07
WP_005061618.1|3963774_3964065_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_005070857.1|3964185_3964377_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024571015.1|3964373_3965141_+	phage antirepressor KilAC domain-containing protein	NA	A0A142K8T5	Gordonia_phage	50.8	2.0e-54
WP_005137913.1|3965243_3965630_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005070861.1|3965626_3965947_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005070862.1|3965946_3966234_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005070869.1|3966433_3967327_+	PD-(D/E)XK nuclease-like domain-containing protein	NA	A0A2D1G8R5	Mycobacterium_phage	50.3	3.3e-77
WP_005070871.1|3967323_3968445_+	hypothetical protein	NA	A0A2P1CGD3	Mycobacterium_phage	69.5	3.2e-98
WP_005070872.1|3968447_3968789_+	hypothetical protein	NA	G8I4S2	Mycobacterium_phage	69.0	5.3e-36
WP_005070873.1|3968816_3969653_+	DUF2303 family protein	NA	G8I4S3	Mycobacterium_phage	66.2	1.2e-105
WP_005070874.1|3969680_3970214_+	hypothetical protein	NA	A0A0F6WF12	Mycobacterium_phage	53.3	5.9e-42
WP_005070875.1|3970210_3970627_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005070877.1|3970623_3971148_+	hypothetical protein	NA	A0A1J0MDV9	Mycobacterium_phage	31.4	5.3e-11
WP_005070879.1|3971144_3972164_+	site-specific DNA-methyltransferase	NA	A0A166YCK5	Gordonia_phage	61.4	6.1e-120
WP_076984167.1|3972160_3972364_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005061662.1|3972491_3972941_+	hypothetical protein	NA	Q6JIG5	Burkholderia_virus	61.9	3.2e-41
WP_024571018.1|3972940_3973384_+	hypothetical protein	NA	A0A142UM78	Mycobacterium_phage	69.3	2.2e-50
WP_005070883.1|3973434_3974346_+	hypothetical protein	NA	A0A1B3B1T0	Gordonia_phage	63.5	2.9e-41
>prophage 6
NZ_AP014547	Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300	4978382	3981302	4007923	4978382	terminase,tail,protease	Mycobacterium_phage(91.3%)	29	NA	NA
WP_024571023.1|3981302_3981704_+	hypothetical protein	NA	G3M5G1	Mycobacterium_phage	59.7	3.4e-34
WP_005070902.1|3981700_3982036_+	hypothetical protein	NA	A0A088F7V7	Mycobacterium_phage	52.0	1.7e-15
WP_005137920.1|3982516_3982909_+	hypothetical protein	NA	A0A1D8EX45	Mycobacterium_phage	75.0	5.1e-51
WP_005070908.1|3982905_3983358_+	AAA family ATPase	NA	A0A1D8EX78	Mycobacterium_phage	66.7	2.2e-53
WP_024571024.1|3983518_3983920_+	hypothetical protein	NA	A0A023ZWK1	Mycobacterium_phage	33.0	1.8e-06
WP_005070911.1|3984068_3985481_+|terminase	terminase	terminase	R4TCB6	Mycobacterium_phage	57.2	3.7e-152
WP_005070913.1|3985495_3986944_+	hypothetical protein	NA	A0A249XTF7	Mycobacterium_phage	71.2	1.1e-167
WP_005137921.1|3986937_3988191_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A1B3AZ47	Gordonia_phage	51.0	3.2e-86
WP_005070916.1|3988194_3988572_+	hypothetical protein	NA	W8EH90	Mycobacterium_phage	82.4	6.2e-46
WP_005070919.1|3988588_3989500_+	hypothetical protein	NA	A0A2K9VEV5	Mycobacterium_phage	81.1	1.2e-138
WP_005070921.1|3989499_3989949_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005070923.1|3989953_3990316_+	hypothetical protein	NA	A0A218M9J6	Mycobacterium_phage	58.3	3.2e-31
WP_005070925.1|3990315_3990723_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005070927.1|3990722_3991082_+	HK97 gp10 family phage protein	NA	NA	NA	NA	NA
WP_005070930.1|3991081_3991492_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005070932.1|3991582_3992662_+	hypothetical protein	NA	G1JTF7	Mycobacterium_virus	44.1	9.2e-58
WP_005061733.1|3992761_3993208_+	hypothetical protein	NA	A0A0A7RVK9	Mycobacterium_phage	43.0	1.3e-26
WP_005070934.1|3993269_3993632_+	hypothetical protein	NA	A0A2P1JR40	Mycobacterium_phage	62.6	1.7e-29
WP_005070937.1|3993646_3997273_+|tail	phage tail tape measure protein	tail	A0A0B5H802	Mycobacterium_phage	43.3	3.7e-204
WP_005070939.1|3997269_3999000_+	hypothetical protein	NA	A0A1I9SC71	Mycobacterium_phage	59.3	8.8e-204
WP_005061742.1|3999043_4000747_+	hypothetical protein	NA	A0A097EYM8	Mycobacterium_phage	77.8	3.5e-269
WP_005070944.1|4000762_4001602_+	hypothetical protein	NA	A0A142K812	Mycobacterium_phage	53.9	1.6e-81
WP_005070948.1|4001598_4004046_+	hypothetical protein	NA	A0A2P1JZR8	Mycobacterium_phage	29.8	2.8e-46
WP_005070951.1|4004129_4005101_+	hypothetical protein	NA	A0A059VL91	Mycobacterium_phage	55.0	7.0e-25
WP_005070954.1|4005123_4005579_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005070956.1|4005598_4005961_+	hypothetical protein	NA	A0A1C9EGR9	Mycobacterium_phage	82.4	1.8e-50
WP_005070959.1|4005963_4006107_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005070960.1|4006103_4006751_+	M15 family metallopeptidase	NA	A0A0K1LIU2	Mycobacterium_phage	76.3	6.0e-97
WP_005070962.1|4006747_4007923_+	hypothetical protein	NA	A0A1X9SFG9	Mycobacterium_phage	70.3	2.8e-124
>prophage 7
NZ_AP014547	Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300	4978382	4182526	4192025	4978382		Burkholderia_phage(25.0%)	8	NA	NA
WP_005071256.1|4182526_4183651_-	acyltransferase	NA	A9YX16	Burkholderia_phage	28.7	2.7e-20
WP_005071257.1|4183647_4184916_-	glycosyltransferase	NA	A0A1L3KK54	Shahe_endorna-like_virus	40.3	3.3e-06
WP_005062157.1|4184965_4185766_-	class I SAM-dependent methyltransferase	NA	A0A2R8FDY2	Brazilian_cedratvirus	52.6	4.9e-56
WP_005071258.1|4185982_4186717_-	class I SAM-dependent methyltransferase	NA	Q98VI8	Paramecium_bursaria_Chlorella_virus	30.2	3.0e-12
WP_005138044.1|4186907_4188041_-	acyltransferase	NA	A9YX16	Burkholderia_phage	26.2	7.0e-16
WP_005062162.1|4188208_4189270_-	NAD-dependent epimerase/dehydratase family protein	NA	A0A0E3IB24	Synechococcus_phage	25.8	1.6e-17
WP_005138046.1|4189433_4190693_-	glycosyltransferase	NA	A0A1L3KK54	Shahe_endorna-like_virus	39.2	2.1e-05
WP_005062166.1|4191158_4192025_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	H9NC64	Sphingomonas_phage	57.5	2.8e-89
>prophage 8
NZ_AP014547	Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300	4978382	4884370	4892745	4978382		Mycobacterium_phage(33.33%)	7	NA	NA
WP_005072016.1|4884370_4885843_+	serine hydrolase	NA	A0A1J0GRK9	Mycobacterium_phage	28.8	4.2e-13
WP_005082750.1|4885970_4886783_+	DUF1906 domain-containing protein	NA	A0A2D1GEF2	Gordonia_phage	49.1	3.1e-50
WP_005138308.1|4886831_4888028_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A1W6JL93	Lactococcus_phage	47.3	2.6e-05
WP_005072022.1|4888457_4889276_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A2D1GEV9	Mycobacterium_phage	55.0	3.3e-68
WP_005100873.1|4890066_4890516_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005072025.1|4890536_4891988_+	HAMP domain-containing histidine kinase	NA	Q8QKV4	Ectocarpus_siliculosus_virus	33.6	2.9e-06
WP_005064635.1|4892067_4892745_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	31.4	4.4e-26
