assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000487255.2_ASM48725v2	NZ_CP019178	Salmonella enterica subsp. enterica serovar Chester str. ATCC 11997 chromosome, complete genome	1	175056-175137	1	CRISPRCasFinder	no		cas3,PD-DExK,WYL,csa3,DEDDh,DinG	Orphan	GATGGCGCTTCGCTTATCGGGCCTAC	26	0	0	NA	NA	NA	1	1	Orphan	cas3,PD-DExK,WYL,csa3,DEDDh,DinG	NA|70aa|up_9|NZ_CP019178.1_162528_162738_+,NA	NA|70aa|up_9|NZ_CP019178.1_162528_162738_+	NA	NA|197aa|up_8|NZ_CP019178.1_162747_163338_-	PRK11001, mtlR, MltR family transcriptional regulator	NA|383aa|up_7|NZ_CP019178.1_163334_164483_-	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional	NA|639aa|up_6|NZ_CP019178.1_164703_166620_-	PRK15083, PRK15083, PTS system mannitol-specific transporter subunit IICBA; Provisional	NA|203aa|up_5|NZ_CP019178.1_167095_167704_+	PRK10357, PRK10357, putative glutathione S-transferase; Provisional	NA|464aa|up_4|NZ_CP019178.1_167802_169194_+	PRK04311, PRK04311, selenocysteine synthase; Provisional	NA|617aa|up_3|NZ_CP019178.1_169190_171041_+	PRK10512, PRK10512, selenocysteinyl-tRNA-specific translation factor; Provisional	NA|384aa|up_2|NZ_CP019178.1_171226_172378_+	PRK09860, PRK09860, putative alcohol dehydrogenase; Provisional	NA|294aa|up_1|NZ_CP019178.1_172449_173331_-	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|513aa|up_0|NZ_CP019178.1_173499_175038_+	cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like	NA|652aa|down_0|NZ_CP019178.1_175211_177167_-	COG3533, COG3533, Uncharacterized protein conserved in bacteria [Function unknown]	NA|272aa|down_1|NZ_CP019178.1_177430_178246_+	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms]	NA|232aa|down_2|NZ_CP019178.1_178394_179090_-	PRK12347, sgbE, L-ribulose-5-phosphate 4-epimerase; Reviewed	NA|287aa|down_3|NZ_CP019178.1_179083_179944_-	PRK13210, PRK13210, L-ribulose-5-phosphate 3-epimerase	NA|221aa|down_4|NZ_CP019178.1_179936_180599_-	PRK13305, sgbH, 3-keto-L-gulonate-6-phosphate decarboxylase UlaD	NA|499aa|down_5|NZ_CP019178.1_180595_182092_-	cd07802, FGGY_L-XK, L-xylulose kinases; a subfamily of the FGGY family of carbohydrate kinases	NA|329aa|down_6|NZ_CP019178.1_182095_183082_-	cd13679, PBP2_TRAP_YiaO_like, Substrate-binding domain of 2,3-diketo-L-gulonate-binding Tripartite ATP-independent  Periplasmic transport system and related proteins; the type 2 periplasmic-binding protein fold	NA|426aa|down_7|NZ_CP019178.1_183093_184371_-	PRK15060, PRK15060, 2,3-diketo-L-gulonate transporter large permease YiaN	NA|158aa|down_8|NZ_CP019178.1_184373_184847_-	PRK09877, PRK09877, 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM; Provisional	NA|311aa|down_9|NZ_CP019178.1_184985_185918_-	pfam16154, DUF4862, Domain of unknown function (DUF4862)
GCF_000487255.2_ASM48725v2	NZ_CP019178	Salmonella enterica subsp. enterica serovar Chester str. ATCC 11997 chromosome, complete genome	2	577291-577391	2	CRISPRCasFinder	no		cas3,PD-DExK,WYL,csa3,DEDDh,DinG	Orphan	GCTTCAGTGGCGAACGTCGTGAA	23	0	0	NA	NA	NA	1	1	Orphan	cas3,PD-DExK,WYL,csa3,DEDDh,DinG	NA,NA	NA|448aa|up_9|NZ_CP019178.1_563438_564782_-	PRK05370, PRK05370, argininosuccinate synthase; Validated	NA|151aa|up_8|NZ_CP019178.1_565409_565862_+	PRK00092, PRK00092, ribosome maturation protein RimP; Reviewed	NA|501aa|up_7|NZ_CP019178.1_565889_567392_+	PRK09202, nusA, transcription elongation factor NusA; Validated	NA|893aa|up_6|NZ_CP019178.1_567416_570095_+	PRK05306, infB, translation initiation factor IF-2; Validated	NA|134aa|up_5|NZ_CP019178.1_570246_570648_+	PRK00521, rbfA, 30S ribosome-binding factor RbfA	NA|315aa|up_4|NZ_CP019178.1_570647_571592_+	PRK05033, truB, tRNA pseudouridine synthase B; Provisional	NA|90aa|up_3|NZ_CP019178.1_571742_572012_+	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed	NA|712aa|up_2|NZ_CP019178.1_572253_574389_+	PRK11824, PRK11824, polynucleotide phosphorylase/polyadenylase; Provisional	NA|295aa|up_1|NZ_CP019178.1_574498_575383_+	PRK11189, PRK11189, lipoprotein NlpI; Provisional	NA|27aa|up_0|NZ_CP019178.1_575488_575569_+	NF033440, small_YrbN, protein YrbN	NA|415aa|down_0|NZ_CP019178.1_577604_578849_+	PRK10483, PRK10483, tryptophan permease; Provisional	NA|336aa|down_1|NZ_CP019178.1_578939_579947_-	PRK10508, PRK10508, luciferase-like monooxygenase	NA|299aa|down_2|NZ_CP019178.1_580123_581020_-	PRK15447, PRK15447, putative protease; Provisional	NA|332aa|down_3|NZ_CP019178.1_581010_582006_-	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]	NA|175aa|down_4|NZ_CP019178.1_582222_582747_+	COG3154, COG3154, Putative lipid carrier protein [Lipid metabolism]	NA|168aa|down_5|NZ_CP019178.1_582740_583244_+	COG3153, COG3153, Predicted acetyltransferase [General function prediction only]	NA|106aa|down_6|NZ_CP019178.1_583230_583548_-	PRK00329, PRK00329, GIY-YIG nuclease superfamily protein; Validated	NA|148aa|down_7|NZ_CP019178.1_583585_584029_+	PRK03467, PRK03467, hypothetical protein; Provisional	NA|173aa|down_8|NZ_CP019178.1_584008_584527_-	cd03134, GATase1_PfpI_like, A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus	NA|212aa|down_9|NZ_CP019178.1_584657_585293_+	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs
GCF_000487255.2_ASM48725v2	NZ_CP019178	Salmonella enterica subsp. enterica serovar Chester str. ATCC 11997 chromosome, complete genome	3	932310-932397	3	CRISPRCasFinder	no	cas3	cas3,PD-DExK,WYL,csa3,DEDDh,DinG	Unclear	GTGTTCCCCGCGCCAGCGGGGATAAAC	27	0	0	NA	NA	I-E	1	1	Unclear	cas3,PD-DExK,WYL,csa3,DEDDh,DinG	NA,NA	NA|546aa|up_9|NZ_CP019178.1_919084_920722_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_8|NZ_CP019178.1_920804_922103_+	PRK00077, eno, enolase; Provisional	NA|224aa|up_7|NZ_CP019178.1_922238_922910_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|266aa|up_6|NZ_CP019178.1_923290_924088_+	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only]	NA|121aa|up_5|NZ_CP019178.1_924175_924538_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|600aa|up_4|NZ_CP019178.1_924973_926773_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|571aa|up_3|NZ_CP019178.1_926772_928485_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_2|NZ_CP019178.1_928560_929295_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|318aa|up_1|NZ_CP019178.1_929382_930336_-	PRK15379, PRK15379, type III secretion system effector SopD	cas3|526aa|up_0|NZ_CP019178.1_930719_932297_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|349aa|down_0|NZ_CP019178.1_932413_933460_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP019178.1_933710_934619_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|480aa|down_2|NZ_CP019178.1_934628_936068_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP019178.1_936054_936660_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|119aa|down_4|NZ_CP019178.1_936677_937034_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP019178.1_937224_937536_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP019178.1_937554_938265_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP019178.1_938264_938744_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP019178.1_938740_939790_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP019178.1_939770_940532_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
