The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP019183	Salmonella enterica subsp. enterica serovar Mbandaka str. ATCC 51958 chromosome, complete genome	4905181	1194787	1263577	4905181	plate,portal,head,tRNA,terminase,capsid,transposase,tail,integrase	Salmonella_phage(88.89%)	67	1199568:1199616	1234523:1234571
WP_023219299.1|1194787_1195366_+	flagellar phase variation DNA invertase Hin	NA	A0A0A7NPV4	Enterobacteria_phage	70.1	6.8e-68
WP_023219298.1|1195724_1197230_+	flagellin FliC	NA	NA	NA	NA	NA
WP_000388874.1|1197297_1197837_+	phase 1 flagellin gene repressor FljA	NA	NA	NA	NA	NA
WP_114159100.1|1198288_1199400_-|transposase	IS3 family transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	25.6	1.7e-06
1199568:1199616	attL	TATTTGGTGGAGCTGGCGGGAGTTGAACCCGCGTCCGAAATTCCTACAT	NA	NA	NA	NA
WP_001536726.1|1199733_1200759_-|integrase	site-specific integrase	integrase	A0A1S6L016	Salmonella_phage	100.0	9.9e-203
WP_000052560.1|1200762_1201395_-	phage repressor protein	NA	A0A1S6KZZ7	Salmonella_phage	58.6	1.4e-66
WP_000102104.1|1201511_1201751_+	hypothetical protein	NA	A0A1S6KZZ6	Salmonella_phage	98.7	8.8e-38
WP_000460858.1|1201786_1202296_+	phage regulatory CII family protein	NA	A0A1S6L008	Salmonella_phage	100.0	1.6e-89
WP_000956168.1|1202303_1202504_+	DUF2724 domain-containing protein	NA	A0A1S6L005	Salmonella_phage	100.0	3.2e-33
WP_000963480.1|1202467_1202809_+	DUF5347 domain-containing protein	NA	A0A1S6L019	Salmonella_phage	100.0	2.1e-56
WP_021293768.1|1202876_1203110_+	DUF2732 family protein	NA	A0A1S6L021	Salmonella_phage	100.0	9.8e-34
WP_076031711.1|1203109_1203337_+	TraR/DksA family transcriptional regulator	NA	A0A1S6L007	Salmonella_phage	98.7	3.2e-37
WP_023171084.1|1203333_1203918_+	3'-5' exonuclease	NA	A0A1S6L012	Salmonella_phage	100.0	4.3e-110
WP_023218232.1|1203914_1204772_+	DNA adenine methylase	NA	A0A1S6L011	Salmonella_phage	99.3	2.2e-163
WP_023218233.1|1204762_1207174_+	replication endonuclease	NA	A0A1S6L028	Salmonella_phage	98.8	0.0e+00
WP_001154444.1|1207329_1207518_+	hypothetical protein	NA	A0A1S6L006	Salmonella_phage	100.0	2.7e-26
WP_001217581.1|1207529_1207763_+	DinI family protein	NA	A0A1S6L014	Salmonella_phage	94.8	4.4e-34
WP_024147339.1|1207858_1208077_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023218234.1|1208086_1209151_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023218235.1|1209147_1210212_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000080839.1|1210231_1210927_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023218236.1|1210975_1212019_-|portal	phage portal protein	portal	A0A1S6KZW5	Salmonella_phage	89.8	2.6e-182
WP_023218237.1|1212018_1213785_-|terminase	terminase ATPase subunit family protein	terminase	A0A1S6KZW3	Salmonella_phage	96.9	0.0e+00
WP_023218238.1|1213927_1214761_+|capsid	GPO family capsid scaffolding protein	capsid	E5G6M5	Salmonella_phage	97.8	1.2e-129
WP_000730757.1|1214777_1215842_+|capsid	phage major capsid protein, P2 family	capsid	A0A1S6KZZ3	Salmonella_phage	99.7	1.9e-196
WP_000059172.1|1215845_1216496_+|terminase	terminase endonuclease subunit	terminase	A0A1S6KZX1	Salmonella_phage	100.0	2.2e-115
WP_023218239.1|1216589_1217054_+|head	head completion/stabilization protein	head	A0A1S6KZW8	Salmonella_phage	97.4	1.6e-83
WP_000868184.1|1217053_1217257_+|tail	tail protein X	tail	E5G6M9	Salmonella_phage	100.0	3.8e-34
WP_000171565.1|1217260_1217476_+	hypothetical protein	NA	E5G6N0	Salmonella_phage	100.0	5.9e-33
WP_001069919.1|1217456_1217966_+	lysozyme	NA	A0A1S6KZY9	Salmonella_phage	98.8	2.2e-94
WP_000731036.1|1217970_1218348_+	hypothetical protein	NA	A0A1S6KZZ2	Salmonella_phage	100.0	8.1e-62
WP_024133383.1|1218344_1218773_+	hypothetical protein	NA	A0A1S6KZX8	Salmonella_phage	98.6	1.5e-67
WP_001039961.1|1218868_1219300_+|tail	phage tail protein	tail	A0A1S6KZY0	Salmonella_phage	99.3	1.1e-75
WP_000343946.1|1219292_1219739_+	phage virion morphogenesis protein	NA	A0A1S6L001	Salmonella_phage	89.1	5.8e-67
WP_001749772.1|1219740_1220592_-	hypothetical protein	NA	E5G6N5	Salmonella_phage	58.9	4.5e-92
WP_001556169.1|1220669_1221248_+|plate	phage baseplate assembly protein V	plate	A0A1S6KZX7	Salmonella_phage	94.8	3.8e-103
WP_000177484.1|1221244_1221604_+|plate	baseplate assembly protein	plate	A0A1S6KZZ4	Salmonella_phage	91.5	3.5e-54
WP_000268273.1|1221590_1222499_+|plate	baseplate assembly protein	plate	A0A1S6KZY6	Salmonella_phage	98.0	7.2e-157
WP_023218240.1|1222491_1223097_+|tail	phage tail protein I	tail	A0A1S6L000	Salmonella_phage	99.5	1.3e-117
WP_000972188.1|1225457_1225997_-|tail	tail fiber assembly protein	tail	A0A1S6KZZ1	Salmonella_phage	99.4	8.5e-97
WP_001165558.1|1226894_1227452_+	serine-type DNA invertase Fin	NA	A0A1S6L009	Salmonella_phage	98.4	5.5e-99
WP_000046109.1|1227554_1228727_+|tail	phage tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	99.7	5.7e-223
WP_001207652.1|1228736_1229252_+|tail	phage major tail tube protein	tail	A0A1S6L002	Salmonella_phage	98.8	7.9e-92
WP_001280962.1|1229306_1229609_+|tail	phage tail assembly protein	tail	A0A1S6KZZ9	Salmonella_phage	100.0	2.5e-45
WP_000763316.1|1229623_1229743_+|tail	GpE family phage tail protein	tail	E5G6Q0	Salmonella_phage	100.0	1.8e-15
WP_023218142.1|1229735_1232543_+|tail	phage tail tape measure protein	tail	E5G6Q1	Salmonella_phage	99.3	0.0e+00
WP_000980409.1|1232539_1233025_+|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	99.2	8.3e-67
WP_023218143.1|1233021_1234122_+	phage late control D family protein	NA	E5G6Q3	Salmonella_phage	94.8	2.6e-193
WP_000980498.1|1234190_1234409_+	hypothetical protein	NA	Q53ZE7	Salmonella_virus	100.0	2.1e-38
WP_000342601.1|1234960_1236124_-	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA	NA
1234523:1234571	attR	TATTTGGTGGAGCTGGCGGGAGTTGAACCCGCGTCCGAAATTCCTACAT	NA	NA	NA	NA
WP_000196151.1|1236131_1238312_-	type I secretion system permease/ATPase	NA	F2Y302	Organic_Lake_phycodnavirus	34.0	1.3e-18
WP_023218144.1|1238308_1239718_-	TolC family outer membrane protein	NA	NA	NA	NA	NA
WP_023218145.1|1239782_1251257_-	biofilm-associated protein BapA	NA	NA	NA	NA	NA
WP_001518569.1|1251871_1252354_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	47.4	5.2e-29
WP_000242604.1|1252503_1252980_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_023218147.1|1252969_1253260_+	RnfH family protein	NA	NA	NA	NA	NA
WP_001203445.1|1253424_1253763_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
WP_000880965.1|1253911_1255573_-	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_001059155.1|1255658_1256537_-	NAD(+) kinase	NA	NA	NA	NA	NA
WP_001518875.1|1256659_1257250_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_023136472.1|1257284_1257890_-	hypothetical protein	NA	NA	NA	NA	NA
WP_127172650.1|1258010_1259297_-	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_001537507.1|1259316_1260108_-	inner membrane protein YpjD	NA	NA	NA	NA	NA
WP_000460052.1|1260273_1261635_+	signal recognition particle protein	NA	NA	NA	NA	NA
WP_000256453.1|1261949_1262198_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_000043266.1|1262216_1262765_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_000469813.1|1262809_1263577_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
>prophage 2
NZ_CP019183	Salmonella enterica subsp. enterica serovar Mbandaka str. ATCC 51958 chromosome, complete genome	4905181	1527568	1534954	4905181	integrase	Cronobacter_phage(33.33%)	9	1526565:1526580	1528858:1528873
1526565:1526580	attL	CCAGCCAGGGAAAAGC	NA	NA	NA	NA
WP_024147353.1|1527568_1527826_+	ogr/Delta-like zinc finger family protein	NA	F1BUM8	Cronobacter_phage	59.5	3.3e-22
WP_076031722.1|1527854_1528820_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A0M4RTQ0	Salmonella_phage	59.9	1.7e-103
WP_023219113.1|1529222_1531955_-	DUF927 domain-containing protein	NA	A0A1W6JPG0	Morganella_phage	31.3	1.6e-106
1528858:1528873	attR	CCAGCCAGGGAAAAGC	NA	NA	NA	NA
WP_023219114.1|1532018_1532288_-	hypothetical protein	NA	Q7M2A0	Enterobacteria_phage	50.8	6.7e-10
WP_023219115.1|1532376_1532784_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023219116.1|1532776_1533199_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024147398.1|1533191_1533395_-	host cell division inhibitor Icd-like protein	NA	NA	NA	NA	NA
WP_024147399.1|1533587_1533779_+	DUF3950 domain-containing protein	NA	A0A0K2FIR8	Escherichia_phage	41.4	4.6e-05
WP_049828064.1|1533994_1534954_-	oxidoreductase	NA	F1BUM2	Cronobacter_phage	46.8	2.8e-66
>prophage 3
NZ_CP019183	Salmonella enterica subsp. enterica serovar Mbandaka str. ATCC 51958 chromosome, complete genome	4905181	1780463	1789634	4905181	tRNA	Enterobacteria_phage(66.67%)	10	NA	NA
WP_000569166.1|1780463_1781411_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.2	1.7e-23
WP_000824854.1|1781394_1782126_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_001261696.1|1782106_1782214_-	protein YohO	NA	NA	NA	NA	NA
WP_001240418.1|1782273_1783005_-	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	87.9	4.5e-101
WP_000272850.1|1783227_1784913_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	91.3	4.8e-279
WP_000598637.1|1784909_1785629_+	two-component system response regulator BtsR	NA	NA	NA	NA	NA
WP_000950413.1|1785675_1786143_+	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	90.3	3.9e-74
WP_023219035.1|1786199_1786730_-	YehR family lipoprotein	NA	NA	NA	NA	NA
WP_000703137.1|1786901_1787360_-	YehR family lipoprotein	NA	Q9EYF5	Enterobacteria_phage	72.5	8.4e-53
WP_000195340.1|1787600_1789634_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	26.9	6.1e-55
>prophage 4
NZ_CP019183	Salmonella enterica subsp. enterica serovar Mbandaka str. ATCC 51958 chromosome, complete genome	4905181	1952845	2012320	4905181	plate,terminase,capsid,transposase,tail,integrase	Burkholderia_virus(33.33%)	71	1952830:1952889	2012278:2013484
1952830:1952889	attL	TGTAAATAGACCCGTTTTAGTTCCATACATTTTTTGAGTTCCCGGCCAAATAATGGTGCT	NA	NA	NA	NA
WP_114159100.1|1952845_1953957_-|transposase	IS3 family transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	25.6	1.7e-06
WP_078054882.1|1954031_1954409_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_023219144.1|1954534_1956988_-	hypothetical protein	NA	NA	NA	NA	NA
WP_076031740.1|1956992_1960892_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023219141.1|1961378_1961852_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024147401.1|1961848_1962070_+	transcriptional regulator	NA	A0A2I7S995	Vibrio_phage	61.2	3.0e-16
WP_023219139.1|1962568_1962922_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000533827.1|1962926_1963229_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
WP_023219138.1|1963737_1964595_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023219137.1|1965078_1966341_-|integrase	integrase arm-type DNA-binding domain-containing protein	integrase	A0A1B0VMI6	Pseudomonas_phage	40.3	1.1e-73
WP_001736108.1|1966986_1967277_-	DUF4102 domain-containing protein	NA	B7SYF8	Stenotrophomonas_phage	49.1	3.0e-08
WP_023219388.1|1968870_1969644_-	DNA adenine methylase	NA	Q8W6S4	Burkholderia_virus	68.0	3.3e-102
WP_023219387.1|1969790_1970252_-	hypothetical protein	NA	A0A0R6PGL8	Moraxella_phage	46.2	1.9e-28
WP_149866775.1|1970239_1970716_-	DUF4376 domain-containing protein	NA	NA	NA	NA	NA
WP_023219385.1|1970940_1972416_-|tail	side tail phage protein	tail	A0A0M3ULH6	Salmonella_phage	41.5	9.2e-77
WP_076031743.1|1972415_1973135_-|tail	phage tail protein I	tail	Q6QI98	Burkholderia_phage	40.6	8.3e-23
WP_023219384.1|1973127_1974243_-|plate	phage baseplate protein	plate	A4JWL6	Burkholderia_virus	54.0	4.6e-105
WP_023219383.1|1974233_1974593_-|plate	baseplate	plate	Q6QIA0	Burkholderia_phage	59.5	1.6e-35
WP_023219382.1|1974640_1975345_-|plate	phage baseplate assembly protein V	plate	A0A067ZIM2	Vibrio_phage	38.8	2.5e-11
WP_024147420.1|1975344_1976442_-	phage late control D family protein	NA	Q6QIA2	Burkholderia_phage	49.4	2.9e-83
WP_023219380.1|1976429_1976648_-	hypothetical protein	NA	A4JWL2	Burkholderia_virus	65.2	7.5e-20
WP_076031744.1|1976647_1977541_-|tail	phage tail protein	tail	A4JWL1	Burkholderia_virus	63.1	1.6e-44
WP_023219377.1|1977540_1980228_-|tail	phage tail tape measure protein	tail	A4JWL0	Burkholderia_virus	40.8	4.0e-163
WP_023219376.1|1980270_1980552_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023219375.1|1980526_1980652_-|tail	GpE family phage tail protein	tail	NA	NA	NA	NA
WP_023219374.1|1980626_1980929_-|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_023219373.1|1981008_1981533_-|tail	phage major tail tube protein	tail	Q6QIA9	Burkholderia_phage	67.8	2.1e-68
WP_023219372.1|1981532_1982942_-|tail	phage tail sheath protein	tail	A4JWK5	Burkholderia_virus	68.7	1.6e-187
WP_023219371.1|1982931_1983162_-	hypothetical protein	NA	Q6QIB1	Burkholderia_phage	62.3	4.8e-09
WP_023219370.1|1983158_1983623_-	hypothetical protein	NA	A4JWK3	Burkholderia_virus	54.3	3.5e-38
WP_024147418.1|1983622_1984063_-	DUF1320 domain-containing protein	NA	A4JWK2	Burkholderia_virus	49.7	2.5e-30
WP_023219368.1|1984065_1984404_-	DUF2190 family protein	NA	Q6QIB4	Burkholderia_phage	57.4	4.9e-18
WP_023219367.1|1984403_1985342_-	hypothetical protein	NA	A4JWK0	Burkholderia_virus	41.1	3.8e-60
WP_023219366.1|1985353_1986439_-	hypothetical protein	NA	A4JWJ9	Burkholderia_virus	51.6	1.2e-92
WP_023219365.1|1986616_1987156_-	phage virion morphogenesis protein	NA	B7SDN8	Haemophilus_phage	40.5	4.6e-10
WP_023219364.1|1987152_1987974_-|capsid	minor capsid protein	capsid	Q6QIB9	Burkholderia_phage	58.8	1.4e-95
WP_023219363.1|1987954_1989433_-	DUF935 domain-containing protein	NA	Q6QIC0	Burkholderia_phage	60.5	1.8e-173
WP_076031745.1|1989432_1990749_-|terminase	terminase	terminase	A0A2P9JZI8	Alteromonadaceae_phage	64.2	8.6e-151
WP_023219361.1|1990745_1991297_-	DUF3486 family protein	NA	A4JWJ3	Burkholderia_virus	61.5	7.2e-51
WP_023219360.1|1991298_1991604_-	hypothetical protein	NA	A0A0S4L0A3	Pseudomonas_phage	66.3	4.1e-32
WP_023219359.1|1991600_1991915_-	hypothetical protein	NA	Q6QIC4	Burkholderia_phage	49.5	6.4e-20
WP_023219358.1|1991911_1992505_-	hypothetical protein	NA	Q5ZQY9	Pseudomonas_phage	34.7	6.7e-10
WP_024147417.1|1992494_1993187_-	transglycosylase SLT domain-containing protein	NA	Q5ZQZ1	Pseudomonas_phage	52.6	1.7e-57
WP_023219356.1|1993159_1993450_-	hypothetical protein	NA	Q6QIC8	Burkholderia_phage	56.9	1.8e-21
WP_023219355.1|1993653_1994004_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_023219354.1|1994138_1994378_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023219353.1|1994386_1994950_-	DUF2441 domain-containing protein	NA	NA	NA	NA	NA
WP_023219352.1|1994985_1995507_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023219351.1|1995544_1995955_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_023219350.1|1996036_1996261_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023219349.1|1996272_1996512_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023219348.1|1996508_1996814_+	helix-turn-helix domain-containing protein	NA	Q5ZR02	Pseudomonas_phage	58.0	3.0e-22
WP_023219347.1|1996824_1997763_+	DUF3102 domain-containing protein	NA	A4JWN3	Burkholderia_virus	58.6	1.8e-81
WP_023219346.1|1997759_1998059_+	phage protein	NA	NA	NA	NA	NA
WP_076031746.1|1998061_1999807_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	Q6QIE0	Burkholderia_phage	65.5	6.1e-213
WP_023219345.1|1999816_2000950_+	AAA family ATPase	NA	A4JWN1	Burkholderia_virus	58.7	3.0e-120
WP_023219343.1|2001151_2001685_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149866762.1|2001687_2001918_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023219341.1|2001904_2002099_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023219340.1|2002095_2002371_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023219339.1|2002357_2002669_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023219338.1|2002716_2003118_+	regulatory protein GemA	NA	A4JWM5	Burkholderia_virus	45.4	4.3e-21
WP_023219337.1|2003117_2003489_+	transcriptional regulator	NA	Q6QIE8	Burkholderia_phage	43.9	8.3e-19
WP_001084817.1|2004045_2004543_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000042271.1|2005021_2005273_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023219548.1|2005344_2006619_-|integrase	integrase arm-type DNA-binding domain-containing protein	integrase	B7SYF8	Stenotrophomonas_phage	39.9	2.0e-72
WP_023219549.1|2007058_2007952_-	dihydrodipicolinate synthase family protein	NA	NA	NA	NA	NA
WP_078054885.1|2008266_2008755_-	heme-binding protein	NA	NA	NA	NA	NA
WP_023219551.1|2009082_2010042_+	alcohol dehydrogenase catalytic domain-containing protein	NA	A0A1E1EWH3	Acanthamoeba_castellanii_mimivirus	28.0	1.1e-22
WP_024147452.1|2010074_2010980_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_114159100.1|2011209_2012320_+|transposase	IS3 family transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	25.6	1.7e-06
2012278:2013484	attR	AGCACCATTATTTGGCCGGGAACTCAAAAAATGTATGGAACTAAAACGGGTCTATTTACACATTAACCATCCGAAAAAAACGGGACCTATGATATTTCCAGCGTTGAAACCAGTAGAAACTATACCAAACATACGTCCGTGACTCCCCTTGGGACTCAATTTCGTTACGAGTATGTCTCTTGAAGGTGAAACTGCGCCAATAAACATTCCGCAAGTAATCATGAGTAAAACAAGGCCTGGCTCGCTGTTCTTCATAAGCGCGATCAGAGAGAGACACAATGTTGCACAGCAAAACATCGCGCCGACAAAATTGTCATGATTGGTTATTTTGTCTGCAAGTATTCCCCCTGCAATCACCCCGGCGACGGTTGAAAAAAGAAAGCCTGTTAGAGACATATTTGCGATTTCGAGGTTGTAACCATGTCCATTAACCAATGAGGCAACGAAAAATTTTTCAATTGCACTAATGCAGATTCCAAGAAGAAAAAAGAAGGAGAAAAGGCGAGCCAGACCATAAGCTTGCAGGCTGCCATCAGTTGAGTCTGGCTGGCGAAACTGCTGCACTTTAGGCCTTAATCCTTGTTCTGAGTGCGTAGCACCTTTGAGAGAGTATGATACGAACAAAAATATACCTACGCTCAATACTGAAACAACCAGAAAAGCAGCCTGAAGACCATATTTTTCAGCGATAAAAACGAGGACAAGAGGTGCTAAAGCCCCCCCCAGGAATCCTGAGCAAGTGTGGATAGAAAAAATACGACCTTTGTTTTCCGTACGAATATTTTGACTGAGTAAAGCATAATTGCAGGGGTGGTATGCTGCATTTGCCACACCCGCGATTATCATCGCAACATAATAAAAATGCAGGTTAAATTGGAAAGCGATCAGGGAAAAACCAGCTGAGGAGAGTAATATCGCGTAAAGAAGAAATGTTTTTGGATTGTATTTATCAACCAGAATTCCGGCATATATTTGTAAGAGGGCTGTCACAAGATTGAAAATCGCAATACCAGTACCGAGTTGAAGATAACTAACATCCGTTTTCATTGTGATAACAGGTATCATCACAGGTATTGCCAGAATACAGAAATGGCTTAGCATATGAGCTGCTGAAACAGCAGACACATTGCGGATCTGTATGCTATCTATTTCGCCCATACTATTTCCCCCTTTTAATCCTTGGACCCCTGATTTATTATTTTTGCCA	NA	NA	NA	NA
>prophage 5
NZ_CP019183	Salmonella enterica subsp. enterica serovar Mbandaka str. ATCC 51958 chromosome, complete genome	4905181	2024218	2031456	4905181		Morganella_phage(33.33%)	7	NA	NA
WP_000394197.1|2024218_2024638_+	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	60.5	8.5e-36
WP_023218550.1|2024640_2025909_+	Y-family DNA polymerase	NA	I6RSM4	Salmonella_phage	92.2	4.2e-227
WP_000208509.1|2026363_2026576_+	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	70.0	3.9e-21
WP_024131109.1|2026586_2026775_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023218551.1|2027035_2028214_-	porin OmpS1	NA	Q1MVN1	Enterobacteria_phage	56.7	2.1e-108
WP_000377042.1|2029256_2029952_+	phosphohydrolase	NA	A0A1D6Y7U0	Golden_Marseillevirus	27.1	2.8e-07
WP_023218553.1|2030025_2031456_+	DNA cytosine methyltransferase	NA	E5E3X6	Burkholderia_phage	57.4	7.8e-105
>prophage 6
NZ_CP019183	Salmonella enterica subsp. enterica serovar Mbandaka str. ATCC 51958 chromosome, complete genome	4905181	2362751	2372792	4905181	tRNA,transposase	Diachasmimorpha_longicaudata_entomopoxvirus(16.67%)	7	NA	NA
WP_076031757.1|2362751_2364125_+	ATP-dependent RNA helicase DbpA	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.3	9.6e-52
WP_001156210.1|2364168_2365104_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	97.3	9.4e-144
WP_023218222.1|2365791_2369214_+	DUF4765 family protein	NA	A0A0N7KZG3	Stx2-converting_phage	50.7	0.0e+00
WP_000159242.1|2369488_2369827_+	EamA family transporter	NA	NA	NA	NA	NA
WP_023218223.1|2369879_2370314_-	universal stress protein UspF	NA	A0A1W6JNV4	Morganella_phage	51.4	2.7e-29
WP_000502119.1|2370909_2371368_+|transposase	IS200/IS605-like element IS200F family transposase	transposase	I4AZI8	Saccharomonospora_phage	31.5	1.0e-13
WP_149866763.1|2371537_2372792_+|transposase	IS3 family transposase	transposase	Q6H9S3	Enterobacteria_phage	33.9	5.4e-17
>prophage 7
NZ_CP019183	Salmonella enterica subsp. enterica serovar Mbandaka str. ATCC 51958 chromosome, complete genome	4905181	2809174	2817380	4905181		Escherichia_phage(42.86%)	9	NA	NA
WP_000497451.1|2809174_2809414_+	virulence protein MsgA	NA	K7P6H1	Enterobacteria_phage	88.6	8.5e-33
WP_023218769.1|2809631_2809796_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023218770.1|2810293_2811103_+	cytolethal distending toxin S-CDT	NA	A5LH53	Enterobacteria_phage	50.0	9.2e-63
WP_001277616.1|2811175_2811553_+	DUF1353 domain-containing protein	NA	I1TQ41	Pseudomonas_phage	38.4	2.2e-14
WP_000158843.1|2811701_2812244_-	glycoside hydrolase family 108 protein	NA	A0A0U2S643	Escherichia_phage	67.0	6.2e-71
WP_023218771.1|2812435_2813164_-	pertussis-like toxin subunit ArtA	NA	A0A0U2KD26	Escherichia_phage	53.3	1.4e-62
WP_023218772.1|2813180_2813594_-	subtilase cytotoxin subunit B	NA	A0A0U2KD34	Escherichia_phage	37.7	1.9e-19
WP_071054869.1|2814546_2815671_-	type III secretion system effector SopF	NA	NA	NA	NA	NA
WP_000444508.1|2816129_2817380_-	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	92.6	1.1e-19
>prophage 8
NZ_CP019183	Salmonella enterica subsp. enterica serovar Mbandaka str. ATCC 51958 chromosome, complete genome	4905181	4335543	4379554	4905181	plate,integrase	Enterobacteria_phage(22.22%)	44	4330207:4330221	4361047:4361061
4330207:4330221	attL	TCAGCGGTACGCTGA	NA	NA	NA	NA
WP_023219490.1|4335543_4336581_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A0B5GXV1	Mycobacterium_phage	25.1	2.6e-09
WP_076031851.1|4336573_4337569_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_076031889.1|4337565_4338705_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_023219487.1|4338960_4339698_-	HNH endonuclease	NA	NA	NA	NA	NA
WP_078054931.1|4340115_4340736_-	DNA cytosine methyltransferase	NA	A0A1B0V7P0	Salmonella_phage	61.2	2.9e-72
WP_078054913.1|4340789_4340936_-	Com family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_023219484.1|4341023_4342169_-	autoagglutinating adhesin	NA	G0YQD8	Erwinia_phage	36.2	3.5e-07
WP_076031852.1|4342606_4344412_-	DNA topoisomerase III	NA	A0A1X9I6W8	Streptococcus_phage	33.5	3.3e-36
WP_023219481.1|4344591_4344846_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023219480.1|4345008_4345293_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_023219479.1|4345298_4345550_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_049828066.1|4345685_4347929_-	DEAD/DEAH box helicase	NA	NA	NA	NA	NA
WP_149866769.1|4348009_4348273_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023219476.1|4348361_4348664_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023219475.1|4348679_4348946_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023219474.1|4348995_4350096_-	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_023219473.1|4350168_4350789_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023219472.1|4350785_4351166_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023219471.1|4351238_4351889_-	DUF3275 family protein	NA	NA	NA	NA	NA
WP_023219470.1|4351965_4352379_-	DUF3577 domain-containing protein	NA	NA	NA	NA	NA
WP_023219469.1|4352742_4353111_-	DUF3085 domain-containing protein	NA	NA	NA	NA	NA
WP_023219468.1|4353132_4353354_-	hypothetical protein	NA	Q6UAT2	Klebsiella_phage	30.1	6.9e-05
WP_023219467.1|4353368_4353635_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023219466.1|4353918_4354926_-	phosphoadenosine phosphosulfate reductase family protein	NA	B7SYG0	Stenotrophomonas_phage	41.4	4.2e-65
WP_023219465.1|4355069_4355474_-	single-stranded DNA-binding protein	NA	A0A0A0P1Q9	Enterobacteria_phage	56.3	8.2e-36
WP_024147434.1|4355490_4355976_-	DUF3158 family protein	NA	NA	NA	NA	NA
WP_023219463.1|4355965_4356784_-	TIGR03761 family integrating conjugative element protein	NA	NA	NA	NA	NA
WP_023219462.1|4357080_4357293_-	TraR/DksA family transcriptional regulator	NA	NA	NA	NA	NA
WP_023219461.1|4357282_4357864_-	DUF2857 domain-containing protein	NA	NA	NA	NA	NA
WP_078054915.1|4357860_4359333_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023219459.1|4359371_4359557_-	AlpA family transcriptional regulator	NA	A0A2H4J8C8	uncultured_Caudovirales_phage	58.0	8.7e-09
WP_024147432.1|4360826_4361588_+	hypothetical protein	NA	NA	NA	NA	NA
4361047:4361061	attR	TCAGCGTACCGCTGA	NA	NA	NA	NA
WP_023219456.1|4361837_4362245_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001659462.1|4362244_4362724_-	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_023219455.1|4364097_4367637_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
WP_023219454.1|4367651_4369052_-	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_031618296.1|4369056_4369740_-	type VI secretion system-associated protein TagO	NA	NA	NA	NA	NA
WP_023219452.1|4369727_4372370_-	type VI secretion system ATPase TssH	NA	H6X3M6	Enterobacteria_phage	30.5	1.8e-86
WP_023219451.1|4372378_4373125_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_023219450.1|4373129_4374473_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_023219449.1|4374475_4374994_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_023219448.1|4374990_4376268_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA	NA
WP_024147429.1|4376285_4377320_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_023219446.1|4379128_4379554_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
