The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP007505	Salmonella enterica subsp. enterica serovar Tennessee str. TXSC_TXSC08-19 chromosome, complete genome	4864410	1013998	1061055	4864410	plate,holin,tRNA,tail	Burkholderia_phage(36.36%)	49	NA	NA
WP_000587738.1|1013998_1014727_-	hypothetical protein	NA	A0A077SLK3	Escherichia_phage	37.3	5.6e-35
WP_000084337.1|1015464_1015920_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024133467.1|1015916_1016522_-	DUF4376 domain-containing protein	NA	NA	NA	NA	NA
WP_000368197.1|1016526_1018284_-|tail	tail fiber protein	tail	A0A0M3ULF6	Salmonella_phage	51.7	1.2e-51
WP_000359506.1|1018286_1018919_-|tail	phage tail protein I	tail	Q6QI98	Burkholderia_phage	56.4	1.1e-23
WP_000951739.1|1018911_1020027_-|plate	baseplate J/gp47 family protein	plate	Q6QI99	Burkholderia_phage	51.7	4.1e-101
WP_001093501.1|1020017_1020377_-	GPW/gp25 family protein	NA	Q6QIA0	Burkholderia_phage	64.2	2.8e-35
WP_001095010.1|1020540_1022088_-	hypothetical protein	NA	B9UDL6	Salmonella_phage	29.9	1.9e-48
WP_000703634.1|1022087_1023017_-	glycosyltransferase family 2 protein	NA	S5FKN0	Shigella_phage	83.8	6.7e-150
WP_000593184.1|1023013_1023376_-	GtrA family protein	NA	U5P0S6	Shigella_phage	70.8	9.6e-44
WP_000679395.1|1023702_1024425_-|plate	phage baseplate assembly protein V	plate	A0A067ZIM2	Vibrio_phage	42.0	3.9e-12
WP_001538099.1|1024434_1025478_-	phage late control D family protein	NA	A4JWL3	Burkholderia_virus	45.9	1.5e-76
WP_001269717.1|1025465_1025675_-|tail	tail protein X	tail	A4JWL2	Burkholderia_virus	60.3	9.8e-17
WP_000271425.1|1025674_1026628_-|tail	phage tail protein	tail	A4JWL1	Burkholderia_virus	50.8	2.3e-36
WP_001262483.1|1026627_1028982_-|tail	phage tail tape measure protein	tail	A4JWL0	Burkholderia_virus	30.9	1.8e-66
WP_001185654.1|1029078_1029207_-|tail	GpE family phage tail protein	tail	NA	NA	NA	NA
WP_001003637.1|1029166_1029484_-|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_000907495.1|1029535_1030060_-|tail	phage major tail tube protein	tail	Q6QIA9	Burkholderia_phage	69.5	2.8e-68
WP_000729844.1|1030059_1031487_-|tail	phage tail sheath family protein	tail	A4JWK5	Burkholderia_virus	71.2	1.4e-194
WP_000875314.1|1031476_1031674_-	hypothetical protein	NA	Q6QIB1	Burkholderia_phage	52.9	8.6e-07
WP_000449432.1|1031670_1032126_-	Gp37 family protein	NA	NA	NA	NA	NA
WP_000777266.1|1032285_1032600_-	membrane protein	NA	Q6QIC4	Burkholderia_phage	49.1	6.4e-20
WP_001270433.1|1032612_1033218_-	lytic transglycosylase domain-containing protein	NA	Q5ZQZ1	Pseudomonas_phage	59.4	2.7e-59
WP_001226439.1|1033220_1033508_-|holin	putative holin	holin	Q6QIC8	Burkholderia_phage	48.1	3.0e-16
WP_000615248.1|1034084_1034432_+	DNA-binding protein	NA	Q6QIE8	Burkholderia_phage	51.5	4.9e-21
WP_000136394.1|1034562_1035912_-	lysine-sensitive aspartokinase 3	NA	NA	NA	NA	NA
WP_000790025.1|1036256_1037906_+	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_001541297.1|1038349_1038592_+	outer membrane protein	NA	NA	NA	NA	NA
WP_161126850.1|1038625_1039294_+	YjbF family lipoprotein	NA	NA	NA	NA	NA
WP_000977963.1|1039290_1040028_+	capsule biosynthesis GfcC family protein	NA	NA	NA	NA	NA
WP_000750800.1|1040027_1042124_+	YjbH domain-containing protein	NA	NA	NA	NA	NA
WP_000982752.1|1042266_1042677_+	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA	NA
WP_001252081.1|1042842_1043733_-	maltose ABC transporter permease MalG	NA	NA	NA	NA	NA
WP_000382564.1|1043747_1045292_-	maltose ABC transporter permease MalF	NA	NA	NA	NA	NA
WP_000695415.1|1045423_1046614_-	maltose/maltodextrin ABC transporter substrate-binding protein MalE	NA	NA	NA	NA	NA
WP_000179176.1|1046975_1048085_+	maltose/maltodextrin ABC transporter ATP-binding protein MalK	NA	Q6GZ03	Mycoplasma_phage	47.2	6.2e-17
WP_000973681.1|1048173_1049532_+	maltoporin	NA	NA	NA	NA	NA
WP_000782497.1|1049695_1050613_+	maltose operon protein MalM	NA	NA	NA	NA	NA
WP_000019219.1|1050793_1051291_+	chorismate lyase	NA	NA	NA	NA	NA
WP_000455249.1|1051304_1052177_+	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA	NA
WP_000017360.1|1052275_1054696_-	glycerol-3-phosphate 1-O-acyltransferase PlsB	NA	NA	NA	NA	NA
WP_000002900.1|1054866_1055235_+	diacylglycerol kinase	NA	NA	NA	NA	NA
WP_000646079.1|1055343_1055952_+	repressor LexA	NA	Q9G0C2	Lactococcus_phage	38.0	1.0e-13
WP_001128115.1|1056130_1057456_+	MATE family efflux transporter DinF	NA	NA	NA	NA	NA
WP_001575282.1|1057452_1057566_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001538094.1|1057587_1057797_+	CsbD family protein	NA	NA	NA	NA	NA
WP_000416271.1|1057896_1058412_-	zinc uptake transcriptional repressor Zur	NA	NA	NA	NA	NA
WP_001039336.1|1058658_1059969_+	conjugal transfer protein TraF	NA	NA	NA	NA	NA
WP_001182232.1|1060056_1061055_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
>prophage 2
NZ_CP007505	Salmonella enterica subsp. enterica serovar Tennessee str. TXSC_TXSC08-19 chromosome, complete genome	4864410	2408834	2479023	4864410	protease,head,plate,portal,tail,holin,integrase,capsid	Cronobacter_phage(59.09%)	76	2408744:2408760	2439322:2439338
2408744:2408760	attL	GGCAACAAAAAACCCAC	NA	NA	NA	NA
WP_000290959.1|2408834_2409887_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A218M4I3	Erwinia_phage	55.8	1.7e-104
WP_000608639.1|2409982_2410663_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000348280.1|2410659_2411688_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000108288.1|2411703_2412297_-	phage repressor protein CI	NA	F1BUN8	Cronobacter_phage	35.5	1.3e-29
WP_000804006.1|2412389_2412611_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000460878.1|2412643_2413147_+	phage regulatory CII family protein	NA	F1BUN6	Cronobacter_phage	72.5	3.5e-60
WP_000643375.1|2413156_2413384_+	DUF2724 domain-containing protein	NA	NA	NA	NA	NA
WP_000996838.1|2413373_2413799_+	hypothetical protein	NA	F1BUN5	Cronobacter_phage	50.4	7.6e-24
WP_000022786.1|2413798_2414200_+	hypothetical protein	NA	F1BUN2	Cronobacter_phage	66.9	1.4e-48
WP_000057334.1|2414267_2414498_+	DUF2732 family protein	NA	NA	NA	NA	NA
WP_000279402.1|2414488_2415349_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	NA	F1BUN1	Cronobacter_phage	83.8	2.4e-133
WP_023199745.1|2415345_2417367_+	replication endonuclease	NA	F1BUM9	Cronobacter_phage	74.9	1.2e-297
WP_023199746.1|2417480_2417699_+	hypothetical protein	NA	E5G6M0	Salmonella_phage	49.1	2.8e-06
WP_001552031.1|2417672_2417996_-	ogr/Delta-like zinc finger family protein	NA	F1BUM8	Cronobacter_phage	92.3	8.0e-50
WP_000038206.1|2417992_2419054_-|portal	phage portal protein	portal	F1BUM7	Cronobacter_phage	77.1	6.7e-162
WP_023199748.1|2419050_2420826_-	hypothetical protein	NA	F1BUM5	Cronobacter_phage	83.3	2.6e-291
WP_000018798.1|2420986_2421787_+|capsid	GPO family capsid scaffolding protein	capsid	F1BUM4	Cronobacter_phage	54.8	3.2e-76
WP_000550496.1|2421848_2422871_+|capsid	phage major capsid protein, P2 family	capsid	F1BUM2	Cronobacter_phage	81.2	1.1e-158
WP_023199749.1|2422874_2423576_+	hypothetical protein	NA	F1BUM0	Cronobacter_phage	66.8	9.4e-88
WP_001680743.1|2423672_2424125_+|head	head completion/stabilization protein	head	F1BUL8	Cronobacter_phage	82.7	1.6e-64
WP_000084220.1|2424121_2424628_+|tail	phage tail protein	tail	F1BUL7	Cronobacter_phage	69.8	5.2e-64
WP_000560083.1|2424624_2425332_+	hypothetical protein	NA	F1BUL6	Cronobacter_phage	76.9	6.8e-102
WP_000220203.1|2425328_2426456_+	DUF2586 family protein	NA	F1BUL5	Cronobacter_phage	83.7	1.9e-175
WP_000166743.1|2426452_2426908_+	DUF2597 family protein	NA	F1BUL4	Cronobacter_phage	72.2	1.5e-57
WP_001154425.1|2426917_2427211_+|holin	phage holin family protein	holin	C7BGD7	Burkholderia_phage	46.2	1.3e-14
WP_000175560.1|2427207_2427549_+	M15 family metallopeptidase	NA	F1BUL3	Cronobacter_phage	91.1	2.2e-50
WP_000376370.1|2427548_2427881_+	hypothetical protein	NA	F1BUL2	Cronobacter_phage	70.9	6.7e-36
WP_000411337.1|2428027_2428285_+|tail	putative phage tail assembly chaperone	tail	A5X9I7	Aeromonas_virus	63.4	3.6e-21
WP_000811088.1|2428472_2430443_+|tail	phage tail tape measure protein	tail	F1BUK9	Cronobacter_phage	68.6	7.8e-265
WP_001002797.1|2430439_2430769_+	DUF2590 family protein	NA	F1BUK8	Cronobacter_phage	72.4	3.8e-39
WP_000136921.1|2430765_2431950_+|plate	baseplate J/gp47 family protein	plate	F1BUK6	Cronobacter_phage	78.4	6.7e-179
WP_001001822.1|2431942_2432530_+	hypothetical protein	NA	F1BUK5	Cronobacter_phage	81.5	5.4e-89
WP_000084301.1|2432539_2434645_+|tail	phage tail protein	tail	S4TP62	Salmonella_phage	75.6	7.7e-218
WP_000122995.1|2434657_2435212_+|tail	tail fiber assembly protein	tail	S4TUB9	Salmonella_phage	97.8	2.7e-98
WP_000267951.1|2435201_2435927_+	hypothetical protein	NA	F1BUK1	Cronobacter_phage	56.4	6.6e-68
WP_000200786.1|2435898_2436444_+	hypothetical protein	NA	F1BUJ9	Cronobacter_phage	71.4	9.3e-59
WP_174519544.1|2436443_2438147_+	hypothetical protein	NA	F1BUJ7	Cronobacter_phage	81.6	1.7e-223
WP_001229272.1|2438668_2439166_-	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
WP_001024853.1|2439482_2441168_-	aspartate:alanine antiporter	NA	NA	NA	NA	NA
2439322:2439338	attR	GGCAACAAAAAACCCAC	NA	NA	NA	NA
WP_000680850.1|2441438_2441816_+	inner membrane protein YbjM	NA	NA	NA	NA	NA
WP_000495513.1|2441847_2442111_-	glutaredoxin, GrxA family	NA	A0A2I7SAE2	Vibrio_phage	70.5	5.9e-27
WP_001259136.1|2442280_2442571_+	YbjC family protein	NA	NA	NA	NA	NA
WP_000075297.1|2442554_2443277_+	nitroreductase NfsA	NA	NA	NA	NA	NA
WP_000684361.1|2443334_2444237_+	30S ribosomal protein S6--L-glutamate ligase	NA	A0A1D7SR78	Cyanophage	34.0	3.5e-34
WP_000624810.1|2444333_2444810_+	YbjN domain-containing protein	NA	NA	NA	NA	NA
WP_000125769.1|2445158_2446271_+	spermidine/putrescine ABC transporter substrate-binding protein PotF	NA	NA	NA	NA	NA
WP_001000698.1|2446358_2447492_+	putrescine ABC transporter ATP-binding subunit PotG	NA	G3M9Y6	Bacillus_virus	34.9	6.5e-30
WP_000105453.1|2447501_2448455_+	putrescine ABC transporter permease PotH	NA	NA	NA	NA	NA
WP_001061629.1|2448451_2449297_+	putrescine ABC transporter permease PotI	NA	NA	NA	NA	NA
WP_000505788.1|2449370_2449844_+	YbjO family protein	NA	NA	NA	NA	NA
WP_001149769.1|2449886_2451017_+	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	NA	A0A1X9I6F4	Streptococcus_phage	26.7	2.8e-25
WP_000399323.1|2451299_2452643_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_000655399.1|2452672_2452993_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_000644023.1|2453002_2454490_+	sulfatase	NA	NA	NA	NA	NA
WP_000737538.1|2454708_2455440_-	ABC transporter substrate-binding protein ArtJ	NA	NA	NA	NA	NA
WP_000895393.1|2455676_2456345_-	arginine ABC transporter permease ArtM	NA	NA	NA	NA	NA
WP_001001677.1|2456344_2457061_-	arginine ABC transporter permease ArtQ	NA	NA	NA	NA	NA
WP_000756586.1|2457067_2457799_-	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000027186.1|2457816_2458545_-	arginine ABC transporter ATP-binding protein ArtP	NA	G9BWD6	Planktothrix_phage	35.8	5.1e-28
WP_001270724.1|2458773_2459289_-	lipoprotein	NA	NA	NA	NA	NA
WP_001160725.1|2459416_2459740_+	heavy metal-binding domain-containing protein	NA	NA	NA	NA	NA
WP_001202294.1|2459736_2460567_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A1B0UZW5	Roseobacter_phage	30.7	2.3e-08
WP_000866904.1|2460563_2461577_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_000068995.1|2461672_2463106_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_000566345.1|2463124_2464117_-	low-specificity L-threonine aldolase	NA	NA	NA	NA	NA
WP_000815326.1|2464155_2465874_-	ubiquinone-dependent pyruvate dehydrogenase	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	24.3	2.2e-29
WP_001538209.1|2466031_2467000_-	NADH oxidoreductase	NA	NA	NA	NA	NA
WP_000458792.1|2467011_2468664_-	hydroxylamine reductase	NA	NA	NA	NA	NA
WP_000491118.1|2468807_2469707_-	lysine exporter LysO family protein	NA	NA	NA	NA	NA
WP_000599765.1|2469908_2471567_+	ATP-dependent endonuclease	NA	NA	NA	NA	NA
WP_001519667.1|2471563_2472514_-	VirK/YbjX family protein	NA	NA	NA	NA	NA
WP_001201754.1|2472659_2473778_+	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	38.9	1.4e-08
WP_000125894.1|2473774_2475721_+	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	42.3	9.1e-40
WP_000447499.1|2475850_2476072_-	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.2	9.3e-18
WP_000520789.1|2476395_2476716_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	4.5e-13
WP_000934062.1|2476746_2479023_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.5	2.8e-165
>prophage 3
NZ_CP007505	Salmonella enterica subsp. enterica serovar Tennessee str. TXSC_TXSC08-19 chromosome, complete genome	4864410	3401611	3458499	4864410	lysis,tail,holin,tRNA,terminase	Salmonella_phage(68.97%)	66	NA	NA
WP_001258633.1|3401611_3403384_-|tRNA	aspartate--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000916146.1|3403708_3404275_+	hydrolase	NA	NA	NA	NA	NA
WP_000334555.1|3404597_3405269_+	SOS response-associated peptidase	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	61.7	5.3e-80
WP_000457670.1|3405261_3406530_-	Y-family DNA polymerase	NA	I6RSM4	Salmonella_phage	99.1	3.4e-245
WP_000394200.1|3406532_3406952_-	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	59.8	3.8e-36
WP_001272648.1|3407188_3408487_-	hypothetical protein	NA	I6R0Q9	Salmonella_phage	99.8	1.1e-246
WP_001113925.1|3408497_3409457_-	hypothetical protein	NA	H6WRW5	Salmonella_phage	100.0	9.6e-184
WP_000094330.1|3409465_3412645_-|tail	phage tail protein	tail	A0A1V0E5M1	Salmonella_phage	96.0	0.0e+00
WP_000904513.1|3412654_3413182_-|tail	tail assembly protein	tail	I6RSM0	Salmonella_phage	93.8	6.4e-65
WP_001156983.1|3413124_3413844_-	C40 family peptidase	NA	A0A1V0E5M9	Salmonella_phage	97.9	3.3e-144
WP_001204735.1|3413843_3414548_-|tail	phage minor tail protein L	tail	A0A1V0E5N2	Salmonella_phage	100.0	3.8e-137
WP_000439677.1|3414711_3414999_+	hypothetical protein	NA	A0A1V0E5N9	Salmonella_phage	100.0	5.6e-47
WP_001046970.1|3415003_3415264_-	DUF1327 domain-containing protein	NA	A0A1V0E5N5	Salmonella_phage	98.8	3.6e-37
WP_001115296.1|3415275_3415623_-|tail	phage tail protein	tail	A0A1V0E5N3	Salmonella_phage	97.4	2.2e-61
WP_001240563.1|3415679_3415901_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000829989.1|3415928_3419282_-	tape measure protein	NA	Q5G8W8	Enterobacteria_phage	90.7	0.0e+00
WP_000827040.1|3419344_3420082_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000262086.1|3420194_3421724_-	DUF4041 domain-containing protein	NA	Q5G8X0	Enterobacteria_phage	98.4	7.9e-164
WP_000065273.1|3422233_3422962_-	KilA-N domain-containing protein	NA	I6S1R0	Salmonella_phage	98.8	3.4e-141
WP_000644473.1|3423183_3423837_-	hypothetical protein	NA	I6R0Q2	Salmonella_phage	98.2	3.3e-119
WP_000742046.1|3423882_3424620_-	immunoglobulin domain-containing protein	NA	Q5G8X3	Enterobacteria_phage	98.4	1.0e-129
WP_000198519.1|3424635_3425022_-	hypothetical protein	NA	Q5G8X4	Enterobacteria_phage	96.9	1.1e-66
WP_001144358.1|3425018_3425456_-	hypothetical protein	NA	A0A1V0E5P5	Salmonella_phage	98.6	3.9e-76
WP_001276816.1|3425543_3425906_-	hypothetical protein	NA	A0A1V0E5P3	Salmonella_phage	92.5	1.6e-62
WP_000633372.1|3426077_3426479_-	hypothetical protein	NA	I6S619	Salmonella_phage	97.7	7.8e-71
WP_001151798.1|3426530_3426710_-	hypothetical protein	NA	I6R9A3	Salmonella_phage	100.0	6.8e-27
WP_000273927.1|3426719_3427796_-	hypothetical protein	NA	I6RSK5	Salmonella_phage	99.7	9.0e-207
WP_000092740.1|3427813_3428263_-	hypothetical protein	NA	I6S1Q2	Salmonella_phage	100.0	9.6e-78
WP_001122569.1|3428275_3429541_-	hypothetical protein	NA	Q5G8Y2	Enterobacteria_phage	97.1	2.0e-229
WP_000201916.1|3429543_3430470_-	hypothetical protein	NA	Q5G8Y3	Enterobacteria_phage	98.7	1.2e-170
WP_000130173.1|3430429_3431779_-	DUF1073 domain-containing protein	NA	Q5G8Y4	Enterobacteria_phage	98.9	7.0e-257
WP_000445799.1|3431911_3433231_-|terminase	PBSX family phage terminase large subunit	terminase	A0A1V0E5Q3	Salmonella_phage	99.5	5.4e-262
WP_000147264.1|3433214_3433646_-|terminase	terminase small subunit	terminase	A0A1V0E5Q4	Salmonella_phage	100.0	7.6e-72
WP_000877029.1|3434000_3434531_-	KilA-N domain-containing protein	NA	B8K1H1	Salmonella_phage	97.2	5.3e-91
WP_023200036.1|3434743_3435226_-|lysis	lysis protein	lysis	H6WRZ5	Salmonella_phage	82.9	2.0e-60
WP_001005894.1|3435222_3435849_-	glycoside hydrolase family 19 protein	NA	Q858F0	Salmonella_phage	80.7	7.1e-95
WP_164708967.1|3435851_3436193_-|holin	phage holin, lambda family	holin	Q8SBE1	Shigella_phage	80.4	7.4e-46
WP_000993186.1|3436393_3437083_-	antitermination protein	NA	I6PDF8	Cronobacter_phage	50.2	5.3e-59
WP_000801757.1|3437079_3437220_-	YlcG family protein	NA	A0A0M5M7B2	Salmonella_phage	78.9	7.2e-08
WP_001096543.1|3437216_3437828_-	recombination protein NinG	NA	A0A0M4RU10	Salmonella_phage	96.6	2.7e-91
WP_000929802.1|3438036_3438639_-	DUF1367 family protein	NA	S4TTI0	Salmonella_phage	99.0	2.8e-109
WP_001804676.1|3438678_3438918_-	hypothetical protein	NA	H6WRY6	Salmonella_phage	100.0	5.9e-42
WP_001217670.1|3438973_3439213_-	DinI family protein	NA	H6WRY5	Salmonella_phage	100.0	3.9e-38
WP_023199006.1|3439733_3440600_-	DUF550 domain-containing protein	NA	A0A075B8H2	Enterobacteria_phage	76.0	6.8e-112
WP_000582226.1|3440610_3441366_-	hypothetical protein	NA	A0A1R3Y5Q7	Salmonella_virus	99.2	2.4e-150
WP_024145847.1|3441365_3441701_-	hypothetical protein	NA	H6WRY0	Salmonella_phage	97.2	8.8e-52
WP_000113626.1|3441697_3442045_-	DUF977 family protein	NA	H6WRX9	Salmonella_phage	100.0	4.5e-59
WP_000800016.1|3442055_3442805_-	ATP-binding protein	NA	H6WRX8	Salmonella_phage	100.0	6.6e-140
WP_001540689.1|3442807_3443791_-	replication protein	NA	H6WRX7	Salmonella_phage	100.0	1.9e-163
WP_001538023.1|3443875_3444250_-	hypothetical protein	NA	S4TTD7	Salmonella_phage	100.0	3.0e-64
WP_000869364.1|3444215_3444452_-	helix-turn-helix domain-containing protein	NA	H6WRX5	Salmonella_phage	100.0	1.8e-38
WP_001009038.1|3444581_3444986_+	transcriptional regulator	NA	H6WRX4	Salmonella_phage	100.0	4.2e-72
WP_000917563.1|3445382_3445541_+	hypothetical protein	NA	H6WRX3	Salmonella_phage	100.0	2.4e-23
WP_023195475.1|3445562_3445913_+	hypothetical protein	NA	S4TSN6	Salmonella_phage	94.8	2.0e-59
WP_000017131.1|3446039_3448955_+	PD-(D/E)XK nuclease-like domain-containing protein	NA	H6WRX1	Salmonella_phage	97.2	0.0e+00
WP_077905240.1|3448917_3450075_+	recombinase RecT	NA	S4TTE8	Salmonella_phage	98.7	2.8e-214
WP_001237031.1|3450117_3450357_+	DUF4060 family protein	NA	S4TR31	Salmonella_phage	100.0	2.0e-37
WP_000065274.1|3450397_3450634_+	excisionase family protein	NA	Q8W657	Enterobacteria_phage	93.6	7.1e-40
WP_000357987.1|3450692_3452006_+	DUF3596 domain-containing protein	NA	Q8W658	Enterobacteria_phage	87.6	1.0e-228
WP_029412303.1|3451984_3452758_+	DUF72 domain-containing protein	NA	Q859D1	Escherichia_coli_phage	80.3	4.2e-57
WP_000252975.1|3452810_3453206_+	MAPEG family protein	NA	NA	NA	NA	NA
WP_000019612.1|3453246_3453990_+	carboxy-S-adenosyl-L-methionine synthase CmoA	NA	F5B419	Synechococcus_phage	30.9	2.4e-25
WP_000569026.1|3453986_3454958_+|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	tRNA	NA	NA	NA	NA
WP_001185768.1|3455193_3455940_-	copper homeostasis protein CutC	NA	NA	NA	NA	NA
WP_000024796.1|3455959_3456529_-	VOC family protein	NA	NA	NA	NA	NA
WP_001025363.1|3456765_3458499_+|tRNA	arginine--tRNA ligase	tRNA	A0A2K9L6Z2	Tupanvirus	33.4	2.8e-85
>prophage 4
NZ_CP007505	Salmonella enterica subsp. enterica serovar Tennessee str. TXSC_TXSC08-19 chromosome, complete genome	4864410	3527814	3535041	4864410		Morganella_phage(33.33%)	8	NA	NA
WP_001157313.1|3527814_3529245_-	DNA cytosine methyltransferase	NA	E5E3X6	Burkholderia_phage	57.4	1.0e-104
WP_000377038.1|3529318_3530014_-	phosphohydrolase	NA	A0A1D6Y7U0	Golden_Marseillevirus	28.2	2.8e-07
WP_000107439.1|3530093_3530405_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001080668.1|3531054_3532233_+	porin OmpS1	NA	Q1MVN1	Enterobacteria_phage	57.2	6.6e-110
WP_024131109.1|3532493_3532682_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000208509.1|3532692_3532905_-	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	70.0	3.9e-21
WP_000457659.1|3533350_3534619_-	Y-family DNA polymerase	NA	I6RSM4	Salmonella_phage	91.7	1.7e-225
WP_000394196.1|3534621_3535041_-	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	60.5	8.5e-36
>prophage 5
NZ_CP007505	Salmonella enterica subsp. enterica serovar Tennessee str. TXSC_TXSC08-19 chromosome, complete genome	4864410	3729020	3738191	4864410	tRNA	Enterobacteria_phage(66.67%)	9	NA	NA
WP_000195343.1|3729020_3731054_+|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	27.6	1.4e-54
WP_000703137.1|3731294_3731753_+	YehR family lipoprotein	NA	Q9EYF5	Enterobacteria_phage	72.5	8.4e-53
WP_000950413.1|3732511_3732979_-	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	90.3	3.9e-74
WP_000598637.1|3733025_3733745_-	two-component system response regulator BtsR	NA	NA	NA	NA	NA
WP_000272850.1|3733741_3735427_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	91.3	4.8e-279
WP_001240418.1|3735649_3736381_+	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	87.9	4.5e-101
WP_001261696.1|3736440_3736548_+	protein YohO	NA	NA	NA	NA	NA
WP_000824852.1|3736528_3737260_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000569166.1|3737243_3738191_-	ABC transporter ATP-binding protein	NA	F2Y1V5	Organic_Lake_phycodnavirus	27.8	3.7e-10
>prophage 6
NZ_CP007505	Salmonella enterica subsp. enterica serovar Tennessee str. TXSC_TXSC08-19 chromosome, complete genome	4864410	3951237	4018435	4864410	protease,coat,portal,holin,tRNA,integrase,terminase	Salmonella_phage(56.06%)	92	3976540:3976556	3997679:3997695
WP_000016631.1|3951237_3952050_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_001289141.1|3952049_3953063_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_023199723.1|3953130_3954267_-	4-phosphoerythronate dehydrogenase PdxB	NA	A0A2R8FDS8	Brazilian_cedratvirus	29.1	5.0e-22
WP_000553395.1|3954370_3955372_+	flagella biosynthesis regulator Flk	NA	NA	NA	NA	NA
WP_023199724.1|3955368_3956547_-	MFS transporter	NA	NA	NA	NA	NA
WP_001051267.1|3956726_3957101_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000433429.1|3957273_3957522_+	transcriptional regulator	NA	A0A0M4UV99	Ralstonia_phage	58.6	3.1e-17
WP_000118253.1|3957690_3958059_+	C40 family peptidase	NA	H6SUH4	Campylobacter_virus	37.9	3.9e-08
WP_000847544.1|3958058_3958577_+	YbjP/YqhG family protein	NA	NA	NA	NA	NA
WP_001142912.1|3958643_3959300_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_000817159.1|3959397_3960612_-	beta-ketoacyl-ACP synthase I	NA	NA	NA	NA	NA
WP_000816083.1|3960771_3962772_+|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	tRNA	NA	NA	NA	NA
WP_000559749.1|3962823_3963099_-	YfcL family protein	NA	NA	NA	NA	NA
WP_001066345.1|3963131_3963680_-	elongation factor P hydroxylase	NA	NA	NA	NA	NA
WP_000368599.1|3963679_3964489_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_000750429.1|3964488_3965313_-	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA	NA
WP_000918460.1|3965316_3966402_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	47.5	1.6e-89
WP_001537978.1|3966437_3967370_-	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_000730794.1|3967535_3968087_+	endonuclease SmrB	NA	NA	NA	NA	NA
WP_001195800.1|3968186_3968672_-	phosphohistidine phosphatase SixA	NA	NA	NA	NA	NA
WP_000214144.1|3968880_3971028_-	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA	NA
WP_001248132.1|3971027_3972338_-	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA	NA
WP_000030904.1|3972515_3972800_-	YfcZ/YiiS family protein	NA	NA	NA	NA	NA
WP_001537977.1|3973170_3974478_+	long-chain fatty acid transporter FadL	NA	NA	NA	NA	NA
WP_000776787.1|3974538_3975294_-	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA	NA
WP_000377772.1|3975582_3976524_+	formate/nitrite transporter family protein	NA	E7DYY8	Enterobacteria_phage	88.2	1.4e-147
3976540:3976556	attL	CCAGTCAGGCGGCGCTA	NA	NA	NA	NA
WP_023199727.1|3976837_3978007_+|integrase	tyrosine-type recombinase/integrase	integrase	I6R0M2	Salmonella_phage	99.5	3.5e-228
WP_000915518.1|3978142_3978505_+	GtrA family protein	NA	I1TED9	Salmonella_phage	83.3	1.2e-51
WP_000703620.1|3978501_3979419_+	glycosyltransferase family 2 protein	NA	I1TED8	Salmonella_phage	90.8	6.0e-159
WP_001060564.1|3979415_3980867_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001112911.1|3980903_3982664_-	right-handed parallel beta-helix repeat-containing protein	NA	Q9AYY6	Salmonella_phage	57.1	9.1e-55
WP_000868965.1|3982740_3984807_-	hypothetical protein	NA	B9UDL1	Salmonella_phage	81.1	1.1e-288
WP_000190208.1|3984806_3986177_-	phage DNA ejection protein	NA	A0A1R3Y5Q4	Salmonella_virus	96.9	3.4e-243
WP_000964894.1|3986186_3986876_-	hypothetical protein	NA	B9UDK9	Salmonella_phage	91.7	5.6e-93
WP_000627701.1|3986878_3987334_-	DUF2824 family protein	NA	E7C9U3	Salmonella_phage	99.3	8.8e-87
WP_000774930.1|3987333_3987972_-	hypothetical protein	NA	A0A088CPT1	Enterobacteria_phage	94.8	3.4e-84
WP_001122422.1|3987975_3989394_-	packaged DNA stabilization protein gp10	NA	I1TEJ1	Salmonella_phage	98.7	7.3e-273
WP_001166102.1|3989353_3989854_-	packaged DNA stabilization gp4 family protein	NA	I1TEJ0	Salmonella_phage	98.2	1.2e-89
WP_000538675.1|3989837_3990398_-	hypothetical protein	NA	I6S1J7	Salmonella_phage	98.4	7.0e-102
WP_001196939.1|3990438_3991731_-|coat	coat protein	coat	Q76H21	Enterobacteria_phage	99.3	1.8e-241
WP_000433852.1|3991730_3992642_-	scaffold protein	NA	A0A192Y6T4	Salmonella_phage	100.0	4.9e-161
WP_000774653.1|3992655_3994833_-|portal	portal protein	portal	A0A1R3Y5N6	Salmonella_virus	99.3	0.0e+00
WP_000417855.1|3994832_3996332_-|terminase	terminase large subunit	terminase	A0A1R3Y5N2	Salmonella_virus	100.0	2.8e-307
WP_000729924.1|3996309_3996798_-	DNA-packaging protein	NA	A8CGG1	Salmonella_phage	100.0	2.9e-88
WP_000013070.1|3996801_3997206_-	hypothetical protein	NA	C6ZR73	Salmonella_phage	98.5	1.7e-65
WP_001140559.1|3997205_3997595_-	hypothetical protein	NA	C6ZR72	Salmonella_phage	98.4	3.3e-74
WP_000807785.1|3997598_3997841_-	DUF2560 family protein	NA	A0A0M4R322	Salmonella_phage	100.0	7.5e-37
3997679:3997695	attR	TAGCGCCGCCTGACTGG	NA	NA	NA	NA
WP_049779930.1|3997988_3998198_-	DUF551 domain-containing protein	NA	A0A193GZ43	Enterobacter_phage	81.5	3.0e-26
WP_164708966.1|3998187_3998457_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000877025.1|3998706_3999237_-	KilA-N domain-containing protein	NA	B8K1H1	Salmonella_phage	96.0	9.0e-91
WP_000182933.1|3999606_3999894_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000078277.1|4000117_4000585_-	glycoside hydrolase family protein	NA	H9C148	Vibrio_phage	45.8	2.5e-28
WP_024133454.1|4000559_4000787_-|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_001235465.1|4001231_4001855_-	antitermination protein	NA	C6ZR62	Salmonella_phage	99.0	1.5e-113
WP_000219140.1|4001851_4002031_-	hypothetical protein	NA	E7C9S6	Salmonella_phage	98.3	1.2e-23
WP_000149880.1|4002011_4002215_-	phage NinH family protein	NA	A0A1V0E5I5	Salmonella_phage	100.0	5.5e-33
WP_001287665.1|4002211_4002781_-	HNH endonuclease	NA	A0A192Y683	Salmonella_phage	100.0	1.1e-107
WP_000861017.1|4002777_4003173_-	RusA family crossover junction endodeoxyribonuclease	NA	A0A1V0E5J0	Salmonella_phage	100.0	1.2e-71
WP_000002249.1|4003169_4003460_-	DUF1364 domain-containing protein	NA	A0A220NQY2	Salmonella_phage	99.0	6.5e-51
WP_001537969.1|4003452_4003755_-	hypothetical protein	NA	A0A220NQY7	Salmonella_phage	100.0	3.8e-54
WP_000950971.1|4003747_4003921_-	protein ninF	NA	A0A220NQX7	Salmonella_phage	100.0	5.6e-26
WP_001537967.1|4003913_4004351_-	DUF2591 family protein	NA	A0A088CQ65	Enterobacteria_phage	38.3	6.4e-10
WP_001254249.1|4004353_4004530_-	NinE family protein	NA	Q716C5	Shigella_phage	100.0	1.0e-27
WP_000814615.1|4004526_4004937_-	recombination protein NinB	NA	A0A0P0ZCW6	Stx2-converting_phage	99.3	7.2e-72
WP_001000121.1|4004933_4005212_-	hypothetical protein	NA	Q9ZWY1	Enterobacteria_phage	93.4	4.3e-44
WP_001064629.1|4005282_4005561_-	hypothetical protein	NA	C6ZR54	Salmonella_phage	97.8	1.9e-47
WP_023199529.1|4005561_4007442_-	toprim domain-containing protein	NA	A0A0M4R313	Salmonella_phage	99.2	0.0e+00
WP_000539344.1|4007552_4008401_-	replication protein	NA	C6ZR51	Salmonella_phage	95.7	8.5e-152
WP_000166968.1|4008387_4008549_-	hypothetical protein	NA	I6R9C7	Salmonella_phage	100.0	1.0e-21
WP_000424138.1|4008569_4008860_-	hypothetical protein	NA	I6RSP4	Salmonella_phage	100.0	2.4e-45
WP_000067726.1|4008967_4009183_-	helix-turn-helix transcriptional regulator	NA	A0A0M4RTV8	Salmonella_phage	100.0	4.1e-34
WP_000856894.1|4009301_4009964_+	LexA family transcriptional regulator	NA	A0A0M4QWY1	Salmonella_phage	99.5	1.7e-126
WP_000216176.1|4010314_4010653_+	hypothetical protein	NA	E7C9Q7	Salmonella_phage	98.2	9.2e-57
WP_129464611.1|4010662_4010869_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000213980.1|4010992_4011193_+	antirestriction Ral family protein	NA	A0A1R3Y5S4	Salmonella_virus	93.9	9.6e-30
WP_000394576.1|4011232_4011523_+	hypothetical protein	NA	K7PH98	Enterobacteria_phage	75.8	5.1e-32
WP_000776966.1|4011846_4012158_+	superinfection exclusion protein	NA	A0A0N7BTN9	Escherichia_phage	99.0	9.3e-56
WP_000972063.1|4012233_4012368_+	hypothetical protein	NA	K7PHK2	Enterobacteria_phage	100.0	3.1e-16
WP_001243355.1|4012352_4012505_+	host cell division inhibitory peptide Kil	NA	A5VWA5	Enterobacteria_phage	100.0	4.7e-21
WP_000604111.1|4012590_4012899_+	hypothetical protein	NA	K7PJM4	Enterobacteria_phage	100.0	1.1e-53
WP_000065844.1|4012895_4013798_+	recombinase RecT	NA	K7PKG9	Enterobacteria_phage	87.8	2.6e-146
WP_000041317.1|4013781_4014264_+	siphovirus Gp157 family protein	NA	K7P6T5	Enterobacteria_phage	98.8	1.4e-79
WP_000753553.1|4014275_4014590_+	hypothetical protein	NA	K7PLT4	Enterobacteria_phage	96.2	6.5e-49
WP_001214775.1|4014606_4014777_+	DUF2737 family protein	NA	I6S642	Salmonella_phage	98.2	5.1e-24
WP_000665846.1|4014773_4015151_+	hypothetical protein	NA	I6R9B7	Salmonella_phage	89.6	1.9e-55
WP_086016725.1|4015147_4015594_+	hypothetical protein	NA	H6WRY0	Salmonella_phage	98.2	5.3e-52
WP_000582226.1|4015593_4016349_+	hypothetical protein	NA	A0A1R3Y5Q7	Salmonella_virus	99.2	2.4e-150
WP_023199524.1|4016359_4017046_+	DUF551 domain-containing protein	NA	A0A220NQU1	Salmonella_phage	91.0	1.0e-62
WP_000002089.1|4017038_4017320_+	hypothetical protein	NA	A0A0F6R7P5	Escherichia_coli_O157_typing_phage	97.8	5.9e-49
WP_001538064.1|4017413_4017713_+	hypothetical protein	NA	G9L655	Escherichia_phage	98.0	1.6e-52
WP_001538065.1|4017790_4018135_+	hypothetical protein	NA	A0A0P0ZB93	Stx2-converting_phage	95.6	3.6e-56
WP_001208732.1|4018231_4018435_+	hypothetical protein	NA	C6ZR24	Salmonella_phage	97.0	2.7e-32
>prophage 7
NZ_CP007505	Salmonella enterica subsp. enterica serovar Tennessee str. TXSC_TXSC08-19 chromosome, complete genome	4864410	4606371	4624871	4864410	integrase,tRNA,tail	Morganella_phage(27.27%)	22	4597063:4597076	4622204:4622217
4597063:4597076	attL	CGCCATCCGGCATC	NA	NA	NA	NA
WP_000338659.1|4606371_4609374_-|tail	phage tail length tape measure family protein	tail	B1GS57	Salmonella_phage	49.8	7.5e-118
WP_000436982.1|4609383_4609704_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000235158.1|4609703_4609874_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000676494.1|4610028_4610502_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000245846.1|4610600_4610876_-	PerC family transcriptional regulator	NA	NA	NA	NA	NA
WP_000126707.1|4610887_4611334_-	single-stranded DNA-binding protein	NA	NA	NA	NA	NA
WP_001244101.1|4611672_4614429_-	TOPRIM and DUF927 domain-containing protein	NA	A0A1W6JPG0	Morganella_phage	57.5	7.7e-303
WP_000628971.1|4614421_4614769_-	hypothetical protein	NA	A0A1B5FPL8	Escherichia_phage	62.2	6.2e-32
WP_000064170.1|4614778_4615405_-	hypothetical protein	NA	A0A286S1S7	Klebsiella_phage	36.6	2.9e-24
WP_000064544.1|4615401_4615602_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001024423.1|4615598_4615862_-	hypothetical protein	NA	NA	NA	NA	NA
WP_122815458.1|4615858_4616605_-	host cell division inhibitor Icd-like protein	NA	NA	NA	NA	NA
WP_000151280.1|4616646_4617234_-	hypothetical protein	NA	A0A1W6JPH8	Morganella_phage	53.9	1.6e-48
WP_000412530.1|4617247_4617682_-	hypothetical protein	NA	A0A1W6JPH9	Morganella_phage	54.3	1.5e-30
WP_024133422.1|4617681_4617879_-	AlpA family transcriptional regulator	NA	A0A1V0E8E5	Vibrio_phage	43.4	6.6e-07
WP_134932720.1|4618127_4618565_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000884061.1|4618603_4618921_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001131482.1|4619057_4620284_-|integrase	tyrosine-type recombinase/integrase	integrase	Q7M297	Enterobacteria_phage	61.9	5.0e-145
WP_000244323.1|4620601_4621360_-	peptidoglycan DD-metalloendopeptidase family protein	NA	I2E8W3	Clostridium_phage	39.5	1.2e-11
WP_000133999.1|4621624_4622170_+	isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA	NA
WP_000003339.1|4622245_4623763_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	37.1	4.8e-89
4622204:4622217	attR	GATGCCGGATGGCG	NA	NA	NA	NA
WP_010989230.1|4623772_4624871_-	peptide chain release factor 2	NA	A0A0S4KWG0	Pseudomonas_phage	39.0	1.8e-05
