The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_022593	Lactococcus lactis subsp. lactis KLDS 4.0325, complete sequence	2589250	12923	76808	2589250	tRNA,protease,integrase,bacteriocin	Bacillus_phage(16.67%)	57	NA	NA
WP_010905029.1|12923_14915_+|bacteriocin	bacteriocin-associated integral membrane family protein	bacteriocin	NA	NA	NA	NA
WP_023163553.1|14916_15552_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.0	1.1e-23
WP_010905031.1|15752_16223_+	hypothetical protein	NA	A0A097BYE2	Leuconostoc_phage	30.1	4.0e-10
WP_023163554.1|16240_16807_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_023163555.1|16807_20293_+	transcription-repair coupling factor	NA	NA	NA	NA	NA
WP_003132169.1|20451_20922_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010905034.1|20992_21310_+	RNA-binding S4 domain-containing protein	NA	NA	NA	NA	NA
WP_003132171.1|21338_21713_+	septum formation initiator family protein	NA	NA	NA	NA	NA
WP_003132172.1|21712_22036_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023163556.1|22173_23523_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010905037.1|23519_24791_+|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	NA	NA	NA	NA
WP_010905038.1|24771_25323_+	hypoxanthine phosphoribosyltransferase	NA	A0A1V0SEQ1	Hokovirus	29.7	1.8e-09
WP_023163557.1|25528_27616_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	G8DDJ2	Micromonas_pusilla_virus	49.2	5.4e-107
WP_023163558.1|28681_30505_+	PTS mannitol transferase subunit IIB	NA	NA	NA	NA	NA
WP_023163559.1|30563_32501_+	transcription antiterminator	NA	NA	NA	NA	NA
WP_003132182.1|32548_32980_+	PTS mannitol transporter subunit IIA	NA	NA	NA	NA	NA
WP_003132184.1|33117_34275_+	mannitol-1-phosphate 5-dehydrogenase	NA	NA	NA	NA	NA
WP_023163560.1|34892_35342_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010905065.1|35418_35661_+	TM2 domain-containing protein	NA	NA	NA	NA	NA
WP_023163561.1|35741_37364_-	SulP family inorganic anion transporter	NA	NA	NA	NA	NA
WP_010905072.1|37573_38095_+	N-acetyltransferase	NA	A0A1P8CWJ6	Bacillus_phage	42.9	6.0e-31
WP_023163562.1|38558_39734_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_003132217.1|39832_40588_+	DNA repair protein RecO	NA	NA	NA	NA	NA
WP_010905074.1|40945_42364_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.0	3.0e-40
WP_023163563.1|42557_44156_-	dihydrolipoamide acetyltransferase	NA	NA	NA	NA	NA
WP_010905076.1|44148_45129_-	alpha-ketoacid dehydrogenase subunit beta	NA	NA	NA	NA	NA
WP_023163564.1|45131_46256_-	thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha	NA	NA	NA	NA	NA
WP_010905078.1|46344_47346_-	lipoate--protein ligase	NA	NA	NA	NA	NA
WP_010905079.1|47544_48390_-	glycerophosphodiester phosphodiesterase	NA	A0A0S2MYI4	Enterococcus_phage	31.0	1.7e-11
WP_023163565.1|48470_49121_-	HD domain-containing protein	NA	A0A1S5XYU7	Kurlavirus	32.4	4.4e-15
WP_023163566.1|49237_50263_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010905082.1|50764_51202_+	OsmC family peroxiredoxin	NA	NA	NA	NA	NA
WP_023163567.1|51362_52676_+	APC family permease	NA	NA	NA	NA	NA
WP_010905084.1|52735_53086_+	hypothetical protein	NA	NA	NA	NA	NA
WP_017863956.1|53144_54140_-	phosphate acyltransferase PlsX	NA	NA	NA	NA	NA
WP_003132241.1|54242_55055_-	HAD family hydrolase	NA	NA	NA	NA	NA
WP_010905087.1|55180_56818_-	ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	25.9	5.3e-49
WP_010905088.1|57945_59226_-	O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase	NA	A0A2I2L687	Orpheovirus	26.9	1.4e-09
WP_023163568.1|59452_60286_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010905090.1|60686_61154_+	universal stress protein	NA	NA	NA	NA	NA
WP_010905091.1|61282_61480_+	DUF4649 domain-containing protein	NA	NA	NA	NA	NA
WP_023163569.1|61510_62131_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010905093.1|62181_63351_+	ring-cleaving dioxygenase	NA	NA	NA	NA	NA
WP_003132255.1|63361_63952_+	flavin reductase family protein	NA	NA	NA	NA	NA
WP_023163570.1|64549_66697_+|bacteriocin	bacteriocin ABC transporter ATP-binding protein/permease	bacteriocin	W8CYL7	Bacillus_phage	26.5	7.2e-38
WP_021214958.1|68226_68364_+|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
WP_023163572.1|68378_69089_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_010905102.1|69514_69967_+	transporter	NA	NA	NA	NA	NA
WP_023163573.1|71148_71328_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023163574.1|71348_71528_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023163575.1|71910_72198_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023163576.1|72430_72613_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023163577.1|72602_72869_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023163578.1|72919_74158_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_003132256.1|74377_74680_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003132257.1|74681_74849_-|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
WP_014571790.1|75542_76808_-|integrase	site-specific integrase	integrase	Q9AZK8	Lactococcus_phage	35.0	2.7e-53
>prophage 2
NC_022593	Lactococcus lactis subsp. lactis KLDS 4.0325, complete sequence	2589250	321042	330910	2589250	integrase	Lactococcus_phage(100.0%)	15	320922:320946	333252:333276
320922:320946	attL	CAACAAAATGATGTAATTTCTTATT	NA	NA	NA	NA
WP_023163713.1|321042_322239_-|integrase	site-specific integrase	integrase	Q9AZI0	Lactococcus_phage	57.4	3.5e-127
WP_023163714.1|322331_323009_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
WP_014570685.1|323166_323397_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_023163715.1|323613_324306_+	hypothetical protein	NA	Q9AZJ5	Lactococcus_phage	47.0	1.2e-18
WP_023163716.1|324381_324576_+	DUF1655 domain-containing protein	NA	Q9AZJ4	Lactococcus_phage	96.9	1.5e-27
WP_023163717.1|324579_325101_+	hypothetical protein	NA	Q9AZJ3	Lactococcus_phage	78.9	2.3e-70
WP_023163719.1|325219_325372_+	hypothetical protein	NA	Q9AZH4	Lactococcus_phage	86.0	1.7e-15
WP_023163720.1|325368_325638_+	hypothetical protein	NA	Q9AZH3	Lactococcus_phage	98.9	1.6e-40
WP_010906214.1|327030_327345_+	hypothetical protein	NA	Q9AZH1	Lactococcus_phage	100.0	3.4e-53
WP_023163722.1|327715_327898_+	hypothetical protein	NA	Q9AZH0	Lactococcus_phage	98.3	3.1e-27
WP_010906212.1|327916_328123_+	hypothetical protein	NA	Q9AZG9	Lactococcus_phage	100.0	1.6e-32
WP_023163723.1|328284_328857_+	hypothetical protein	NA	Q9AZG7	Lactococcus_phage	94.7	7.9e-93
WP_023163724.1|328871_329234_+	hypothetical protein	NA	Q9AZG6	Lactococcus_phage	65.8	9.9e-33
WP_023163726.1|329832_330063_+	hypothetical protein	NA	A0A1P8BME4	Lactococcus_phage	96.1	1.9e-37
WP_023163727.1|330238_330910_+	hypothetical protein	NA	A0A1X9IGJ1	Lactococcus_phage	31.5	3.4e-26
333252:333276	attR	CAACAAAATGATGTAATTTCTTATT	NA	NA	NA	NA
>prophage 3
NC_022593	Lactococcus lactis subsp. lactis KLDS 4.0325, complete sequence	2589250	441732	463397	2589250	integrase	Lactococcus_phage(52.38%)	32	433602:433621	471168:471187
433602:433621	attL	AAATAAAAAGTTACTGACAG	NA	NA	NA	NA
WP_003131595.1|441732_442050_+	thioredoxin	NA	A0A0K2FIM3	Achromobacter_phage	30.4	4.5e-05
WP_023163753.1|442135_442762_+	DUF4479 domain-containing protein	NA	NA	NA	NA	NA
WP_023163754.1|442924_444265_+	NADH oxidase	NA	NA	NA	NA	NA
WP_023163755.1|444354_444744_+	single-stranded DNA-binding protein	NA	A0A0K0MWE1	Streptococcus_phage	45.0	1.8e-24
WP_003131589.1|444863_445148_+	co-chaperone GroES	NA	A0A221S386	uncultured_virus	44.1	3.1e-13
WP_003131585.1|445235_446864_+	chaperonin GroEL	NA	A0A219YK78	uncultured_virus	56.8	4.9e-156
WP_003131583.1|446909_447722_-	MBL fold metallo-hydrolase	NA	A0A0C5AJ83	Bacteriophage	38.1	3.1e-34
WP_010905315.1|447892_449335_-	cell wall metabolism sensor histidine kinase WalK	NA	W8CYF6	Bacillus_phage	33.0	1.4e-32
WP_003131580.1|449327_450029_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	39.7	1.2e-42
WP_012897230.1|450206_450842_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	65.0	5.4e-74
WP_003131573.1|450974_451835_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	45.2	5.0e-67
WP_010905316.1|451886_452669_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003131570.1|452661_452988_+	DNA replication initiation control protein YabA	NA	NA	NA	NA	NA
WP_010905318.1|452987_453863_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	65.4	8.7e-99
WP_003131566.1|453939_454131_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023163756.1|455137_455470_-	hypothetical protein	NA	Q9AZE0	Lactococcus_phage	70.4	5.5e-38
WP_043994739.1|455469_455781_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023163758.1|456029_456602_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023163759.1|456615_456930_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023163761.1|457224_457965_-	hypothetical protein	NA	A0A1P8BLT1	Lactococcus_phage	41.7	2.4e-41
WP_023163762.1|457964_458729_-	replisome organizer	NA	A0A1P8BLU3	Lactococcus_phage	67.8	1.6e-77
WP_023163763.1|458739_459066_-	HTH domain-containing protein	NA	Q9AZE7	Lactococcus_phage	88.9	5.2e-49
WP_023163764.1|459052_459316_-	hypothetical protein	NA	Q9AZE9	Lactococcus_phage	73.5	1.5e-30
WP_023163765.1|459312_459558_-	hypothetical protein	NA	Q9AZJ0	Lactococcus_phage	67.1	1.7e-23
WP_023163766.1|459567_459810_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023163767.1|459848_460118_-	hypothetical protein	NA	Q9AZH3	Lactococcus_phage	59.6	1.3e-18
WP_023163768.1|460114_460633_-	hypothetical protein	NA	Q9AZJ3	Lactococcus_phage	47.0	3.1e-19
WP_023163769.1|460637_460832_-	DUF1655 domain-containing protein	NA	Q9AZJ4	Lactococcus_phage	96.9	5.1e-28
WP_023163770.1|460958_461222_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023163771.1|461259_461454_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_023163772.1|461600_462131_+	XRE family transcriptional regulator	NA	Q9AZN3	Lactococcus_phage	71.0	3.1e-19
WP_023163773.1|462197_463397_+|integrase	site-specific integrase	integrase	Q9AZI0	Lactococcus_phage	79.4	4.7e-180
471168:471187	attR	CTGTCAGTAACTTTTTATTT	NA	NA	NA	NA
>prophage 4
NC_022593	Lactococcus lactis subsp. lactis KLDS 4.0325, complete sequence	2589250	521070	542031	2589250	head,protease,integrase,transposase	Lactococcus_phage(85.71%)	33	521328:521356	539291:539319
WP_010905402.1|521070_521346_+	DNA-binding protein HU	NA	A7KV42	Bacillus_phage	67.4	1.6e-22
521328:521356	attL	GAAAGACGCAGTTAAATAATTATAGCTAT	NA	NA	NA	NA
WP_023163786.1|521455_522604_-|integrase	site-specific integrase	integrase	Q9AZF9	Lactococcus_phage	99.0	3.0e-208
WP_023163787.1|522728_523226_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023163788.1|523244_524144_-	DNA polymerase III subunit epsilon	NA	X2KQX9	Campylobacter_phage	36.9	1.4e-38
WP_023163789.1|524182_524617_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023163790.1|524626_524962_-	helix-turn-helix domain-containing protein	NA	A0A182BQC8	Lactococcus_phage	52.8	3.0e-23
WP_023163791.1|525257_525464_+	hypothetical protein	NA	A0A182BQC7	Lactococcus_phage	89.7	4.6e-27
WP_010905405.1|525478_525739_+	excisionase	NA	Q9AZF3	Lactococcus_phage	100.0	8.6e-47
WP_023163792.1|525898_526093_+	DUF1655 domain-containing protein	NA	Q9AZF2	Lactococcus_phage	90.6	2.2e-26
WP_023163793.1|526097_526523_+	hypothetical protein	NA	Q9AZF1	Lactococcus_phage	90.1	1.8e-70
WP_023163794.1|526557_526797_+	hypothetical protein	NA	Q9AZF0	Lactococcus_phage	96.2	4.4e-37
WP_023163795.1|526793_527048_+	hypothetical protein	NA	Q9AZE9	Lactococcus_phage	97.6	1.4e-41
WP_023163796.1|527044_527239_+	hypothetical protein	NA	Q9AZE8	Lactococcus_phage	96.9	6.7e-28
WP_023163797.1|527225_527552_+	hypothetical protein	NA	Q9AZE7	Lactococcus_phage	71.3	3.5e-37
WP_003331414.1|527747_528506_-	ATPase AAA	NA	A0A059NT77	Lactococcus_phage	100.0	5.3e-137
WP_003331415.1|528517_529741_-|transposase	IS21-like element IS712 family transposase	transposase	A0A059NT83	Lactococcus_phage	100.0	4.9e-233
WP_023163800.1|530300_531743_+	hypothetical protein	NA	Q9AZE5	Lactococcus_phage	96.9	5.9e-270
WP_003132931.1|532054_532456_+	hypothetical protein	NA	Q9AZI4	Lactococcus_phage	56.8	5.1e-30
WP_010905414.1|532611_532797_+	hypothetical protein	NA	Q9AZE3	Lactococcus_phage	100.0	7.0e-27
WP_023163802.1|532823_533432_+	hypothetical protein	NA	Q9AZE2	Lactococcus_phage	99.5	4.4e-102
WP_023163803.1|533440_534031_+|head,protease	HK97 family phage prohead protease	head,protease	Q9AZE1	Lactococcus_phage	98.0	1.1e-105
WP_023163804.1|534246_534576_+	hypothetical protein	NA	Q9AZE0	Lactococcus_phage	100.0	2.7e-53
WP_043994747.1|534678_534999_+	sigma-70 family RNA polymerase sigma factor	NA	Q9AZD9	Lactococcus_phage	92.5	3.3e-48
WP_010905419.1|535692_535965_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010905420.1|536081_536303_+	hypothetical protein	NA	Q9AZD7	Lactococcus_phage	100.0	3.0e-32
WP_010905421.1|536471_536960_+	DUF4065 domain-containing protein	NA	Q9AZD6	Lactococcus_phage	100.0	5.0e-88
WP_010905422.1|536925_537492_+	hypothetical protein	NA	Q9AZD5	Lactococcus_phage	100.0	4.6e-101
WP_010905423.1|537810_537993_+	hypothetical protein	NA	Q9AZD4	Lactococcus_phage	100.0	5.0e-25
WP_010905424.1|538659_538860_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	100.0	6.7e-31
WP_003131761.1|539400_539898_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
539291:539319	attR	GAAAGACGCAGTTAAATAATTATAGCTAT	NA	NA	NA	NA
WP_003131760.1|540044_540554_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	42.7	6.7e-27
WP_003131759.1|540567_541128_+	methylphosphotriester-DNA--protein-cysteine methyltransferase family protein	NA	NA	NA	NA	NA
WP_023163806.1|541221_542031_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	36.7	1.7e-19
>prophage 5
NC_022593	Lactococcus lactis subsp. lactis KLDS 4.0325, complete sequence	2589250	956393	996007	2589250	holin,head,integrase,tail,transposase,portal,terminase	Lactococcus_phage(96.08%)	61	955122:955138	1000925:1000941
955122:955138	attL	AGTAAATTTTACTGACA	NA	NA	NA	NA
WP_043994585.1|956393_957527_-|integrase	site-specific integrase	integrase	A0A059NT56	Lactococcus_phage	92.8	7.8e-193
WP_023163965.1|957849_958716_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023163966.1|958768_959065_-	hypothetical protein	NA	Q9AZF7	Lactococcus_phage	99.0	2.1e-49
WP_023163967.1|959144_959345_-	hypothetical protein	NA	A0A1P8BMQ1	Lactococcus_phage	89.4	5.8e-27
WP_023163968.1|959396_959831_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023163969.1|959840_960176_-	XRE family transcriptional regulator	NA	Q9AZF5	Lactococcus_phage	53.6	5.4e-25
WP_023163970.1|960468_960660_+	hypothetical protein	NA	Q9AZF4	Lactococcus_phage	95.2	4.7e-26
WP_023163971.1|960674_961418_+	AntA/AntB antirepressor	NA	A0A1P8BKE3	Lactococcus_phage	91.9	1.4e-129
WP_023163972.1|961430_961763_+	DUF771 domain-containing protein	NA	Q9AZQ3	Lactococcus_phage	97.2	3.8e-55
WP_023163975.1|962128_962335_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023163976.1|962337_962526_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023163977.1|962574_962838_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023163978.1|962927_963491_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023163979.1|963478_963688_+	hypothetical protein	NA	A0A1P8BLR5	Lactococcus_phage	81.6	2.0e-09
WP_023163980.1|963677_964415_+	phage recombination protein Bet	NA	A5GZ45	Lactococcus_phage	99.6	5.2e-137
WP_023163981.1|964416_965484_+	DUF1351 domain-containing protein	NA	A5GZ46	Lactococcus_phage	98.0	1.1e-169
WP_043994587.1|965746_966673_+	DnaD domain protein	NA	A5GZ47	Lactococcus_phage	88.3	2.9e-129
WP_023163984.1|966665_966908_+	hypothetical protein	NA	A5GZ49	Lactococcus_phage	96.2	2.5e-40
WP_014570810.1|966920_967331_+	hypothetical protein	NA	A5GZ50	Lactococcus_phage	100.0	1.3e-76
WP_023163985.1|967438_967591_+	hypothetical protein	NA	A0A1P8BM01	Lactococcus_phage	93.9	6.8e-20
WP_003331415.1|967781_969005_+|transposase	IS21-like element IS712 family transposase	transposase	A0A059NT83	Lactococcus_phage	100.0	4.9e-233
WP_003331414.1|969016_969775_+	ATPase AAA	NA	A0A059NT77	Lactococcus_phage	100.0	5.3e-137
WP_023163987.1|970128_970638_+	hypothetical protein	NA	Q9AZU7	Lactococcus_phage	100.0	1.3e-09
WP_023163988.1|970646_970979_+	hypothetical protein	NA	Q9G0E0	Lactococcus_phage	88.2	7.5e-11
WP_023163989.1|970959_971226_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023163990.1|971226_971433_+	DUF1125 domain-containing protein	NA	Q9MC26	Lactococcus_phage	58.8	1.3e-13
WP_109009791.1|971404_971998_+	DUF1642 domain-containing protein	NA	Q9AZU5	Lactococcus_phage	56.6	3.6e-40
WP_023163992.1|971994_972228_+	hypothetical protein	NA	A0A1P8BMH6	Lactococcus_phage	60.8	8.9e-19
WP_023163993.1|972224_972557_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023163994.1|972546_972840_+	hypothetical protein	NA	Q9MBV6	Lactococcus_phage	84.1	3.3e-26
WP_023163995.1|972836_973172_+	DUF1140 family protein	NA	A0A1B1IMW5	Lactococcus_phage	90.8	1.4e-49
WP_023163996.1|973190_973427_+	hypothetical protein	NA	A0A1P8BMS6	Lactococcus_phage	47.5	2.9e-09
WP_023163997.1|973423_973624_+	hypothetical protein	NA	A0A1P8BKA6	Lactococcus_phage	90.9	1.0e-31
WP_023163998.1|973859_974102_+	hypothetical protein	NA	Q8LTL7	Lactococcus_phage	71.2	1.4e-27
WP_023163999.1|974216_974429_+	XRE family transcriptional regulator	NA	Q9AZN3	Lactococcus_phage	91.4	1.8e-26
WP_014573151.1|974509_974932_+	DUF722 domain-containing protein	NA	Q9AYX5	Lactococcus_phage	100.0	5.5e-75
WP_023164000.1|975115_975709_+	hypothetical protein	NA	D2IYV7	Enterococcus_phage	27.6	4.9e-13
WP_023164002.1|975880_976291_+|terminase	terminase	terminase	Q9AZ67	Lactococcus_phage	98.5	1.6e-66
WP_023164003.1|976283_977666_+|terminase	terminase	terminase	Q8LTR4	Lactococcus_phage	98.5	3.4e-267
WP_023164004.1|977686_979063_+|portal	phage portal protein	portal	Q9AZ65	Lactococcus_phage	93.0	8.8e-239
WP_023164005.1|979066_980107_+	hypothetical protein	NA	A0A1P8BM04	Lactococcus_phage	97.7	4.8e-189
WP_023164006.1|980204_980552_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023164007.1|980736_981366_+	DUF4355 domain-containing protein	NA	Q9AYW7	Lactococcus_phage	82.7	1.9e-63
WP_023164008.1|981384_982248_+	hypothetical protein	NA	A0A1P8BKP7	Lactococcus_phage	97.9	4.2e-154
WP_080681443.1|982247_982514_+	Ig domain-containing protein	NA	A0A1P8BLK6	Lactococcus_phage	88.7	4.9e-21
WP_023164010.1|982535_982868_+|head,tail	phage head-tail connector protein	head,tail	A0A1P8BMC5	Lactococcus_phage	99.1	9.3e-54
WP_023164011.1|982864_983176_+	hypothetical protein	NA	A0A1P8BLP2	Lactococcus_phage	95.1	1.5e-53
WP_014570728.1|983172_983511_+	HK97 gp10 family phage protein	NA	Q77K21	Lactococcus_phage	97.3	7.3e-54
WP_023164012.1|983507_983897_+	hypothetical protein	NA	A0A1P8BKT6	Lactococcus_phage	99.2	5.6e-66
WP_023164013.1|983907_984405_+|tail	phage major tail protein, TP901-1 family	tail	A0A1P8BKV6	Lactococcus_phage	97.0	2.4e-85
WP_014570725.1|984520_984856_+	hypothetical protein	NA	Q77RZ7	Lactococcus_phage	99.1	4.2e-54
WP_043994770.1|984951_985215_+	hypothetical protein	NA	Q9AZ59	Lactococcus_phage	100.0	5.0e-42
WP_023164014.1|985229_988043_+|tail	phage tail tape measure protein	tail	Q9G097	Lactococcus_phage	96.0	3.6e-287
WP_023164015.1|988056_988818_+	hypothetical protein	NA	Q9AYV7	Lactococcus_phage	98.0	8.8e-140
WP_023164016.1|988817_991571_+	peptidase M23	NA	A0A1P8BMA1	Lactococcus_phage	96.4	0.0e+00
WP_023164017.1|991583_992402_+	DUF2479 domain-containing protein	NA	A0A1L2JXK8	Streptococcus_phage	88.6	2.0e-137
WP_023164018.1|992483_993635_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023164019.1|993762_994068_+	hypothetical protein	NA	A0A1P8BKN8	Lactococcus_phage	96.0	8.9e-51
WP_023164020.1|994054_994279_+|holin	holin	holin	A0A059NT58	Lactococcus_phage	86.5	2.7e-28
WP_043994592.1|995627_995831_+	hypothetical protein	NA	A0A059NTA2	Lactococcus_phage	84.3	4.0e-15
WP_023164022.1|995827_996007_+	hypothetical protein	NA	Q9AZG2	Lactococcus_phage	94.9	2.3e-22
1000925:1000941	attR	AGTAAATTTTACTGACA	NA	NA	NA	NA
>prophage 6
NC_022593	Lactococcus lactis subsp. lactis KLDS 4.0325, complete sequence	2589250	1037405	1051190	2589250		Enterococcus_phage(25.0%)	12	NA	NA
WP_003130964.1|1037405_1038098_+	cell division ATP-binding protein FtsE	NA	G9BWD6	Planktothrix_phage	34.4	2.7e-31
WP_010905664.1|1038090_1039026_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003130966.1|1039127_1040105_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A096XT60	Enterococcus_phage	66.2	2.4e-118
WP_023164037.1|1040454_1042623_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	61.1	3.0e-257
WP_003130968.1|1042758_1043181_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A142F1R4	Bacillus_phage	37.3	2.3e-12
WP_012897612.1|1043182_1043401_-	redoxin NrdH	NA	C3U2K9	Lactococcus_phage	47.6	7.6e-12
WP_023164038.1|1043574_1044216_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_003130974.1|1044490_1046425_+	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	43.4	5.4e-125
WP_023164039.1|1046629_1047169_+	cysteine hydrolase family protein	NA	NA	NA	NA	NA
WP_023164040.1|1047161_1047995_+	3'-5' exonuclease	NA	A0A0K2SUJ2	Clostridium_phage	39.4	3.1e-21
WP_023164041.1|1047991_1048441_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_043994596.1|1048715_1051190_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	32.2	3.2e-98
>prophage 7
NC_022593	Lactococcus lactis subsp. lactis KLDS 4.0325, complete sequence	2589250	1059850	1068119	2589250		Staphylococcus_phage(50.0%)	9	NA	NA
WP_023164046.1|1059850_1060939_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	38.8	1.1e-50
WP_023164047.1|1060938_1061589_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	43.1	6.1e-41
WP_023164048.1|1061597_1062794_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	51.3	2.7e-111
WP_003130993.1|1062821_1063286_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	53.7	1.8e-39
WP_003130994.1|1063388_1063841_+	lipoprotein signal peptidase	NA	NA	NA	NA	NA
WP_023164049.1|1063901_1064807_+	RluA family pseudouridine synthase	NA	A0A2H4UV25	Bodo_saltans_virus	27.8	7.0e-11
WP_003130996.1|1064953_1065397_+	divergent PAP2 family protein	NA	NA	NA	NA	NA
WP_032398531.1|1065537_1067160_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023164050.1|1067162_1068119_+	glycosyltransferase	NA	I1TED8	Salmonella_phage	37.5	4.0e-49
>prophage 8
NC_022593	Lactococcus lactis subsp. lactis KLDS 4.0325, complete sequence	2589250	1671512	1753505	2589250	holin,tRNA,head,tail,integrase,portal,terminase	Lactococcus_phage(85.71%)	92	1714751:1714780	1751438:1751467
WP_031560317.1|1671512_1672709_-|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	48.1	3.9e-41
WP_023164332.1|1672928_1673465_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_023164333.1|1673513_1674296_-	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA	NA
WP_015426725.1|1674396_1675242_-	DegV family protein	NA	NA	NA	NA	NA
WP_015426726.1|1675259_1675652_-	DUF1149 family protein	NA	NA	NA	NA	NA
WP_031560327.1|1675777_1676521_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_017864756.1|1676525_1677041_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_072285314.1|1677211_1678039_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_023164336.1|1678179_1679124_-	ferrochelatase	NA	NA	NA	NA	NA
WP_003130710.1|1679385_1679625_-	KH domain-containing protein	NA	NA	NA	NA	NA
WP_003130711.1|1679720_1679993_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_023164337.1|1680081_1681314_-	hydroxymethylglutaryl-CoA reductase, degradative	NA	NA	NA	NA	NA
WP_047686773.1|1681394_1682534_-	thiolase family protein	NA	NA	NA	NA	NA
WP_023164339.1|1682842_1683997_+	hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA	NA
WP_017864764.1|1684057_1684765_-	glucosamine-6-phosphate deaminase	NA	NA	NA	NA	NA
WP_023164340.1|1686173_1687211_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_043994808.1|1687287_1687584_-	XRE family transcriptional regulator	NA	A0A1S5SAD3	Streptococcus_phage	42.0	6.9e-08
WP_003130730.1|1695190_1695946_-	WxL domain-containing protein	NA	NA	NA	NA	NA
WP_023164346.1|1695983_1696742_-	WxL domain-containing protein	NA	NA	NA	NA	NA
WP_080513158.1|1696779_1697508_-	WxL domain-containing protein	NA	NA	NA	NA	NA
WP_010906042.1|1698505_1698601_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023164348.1|1699420_1700038_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012898204.1|1700051_1700222_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010906045.1|1700249_1701557_-	GTPase ObgE	NA	NA	NA	NA	NA
WP_023164349.1|1701712_1702891_-	cell division protein FtsQ/DivIB	NA	NA	NA	NA	NA
WP_023164350.1|1702891_1703965_-	undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	NA	NA	NA	NA	NA
WP_003130748.1|1704174_1705527_-	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	NA	NA	NA	NA	NA
WP_010906046.1|1706018_1706360_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_023164351.1|1706491_1707733_-	ammonium transporter	NA	NA	NA	NA	NA
WP_023164352.1|1707915_1709391_-	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	33.5	3.0e-27
WP_003130756.1|1709399_1710092_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	34.1	5.3e-35
WP_023164353.1|1710247_1710778_-	DUF177 domain-containing protein	NA	NA	NA	NA	NA
WP_003130760.1|1710908_1711154_-	type B 50S ribosomal protein L31	NA	NA	NA	NA	NA
WP_010906049.1|1711309_1711741_-	hypothetical protein	NA	A0A1P8BMT7	Lactococcus_phage	34.3	7.4e-11
WP_010906050.1|1711855_1712218_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010906051.1|1712703_1713225_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023164354.1|1713294_1714131_-	metallophosphoesterase	NA	NA	NA	NA	NA
1714751:1714780	attL	TATTTTTTGAAGTTATCCATGAGATCCATG	NA	NA	NA	NA
WP_023164022.1|1715285_1715465_-	hypothetical protein	NA	Q9AZG2	Lactococcus_phage	94.9	2.3e-22
WP_043994592.1|1715461_1715665_-	hypothetical protein	NA	A0A059NTA2	Lactococcus_phage	84.3	4.0e-15
WP_023164020.1|1717013_1717238_-|holin	holin	holin	A0A059NT58	Lactococcus_phage	86.5	2.7e-28
WP_023164019.1|1717224_1717530_-	hypothetical protein	NA	A0A1P8BKN8	Lactococcus_phage	96.0	8.9e-51
WP_023164018.1|1717657_1718809_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023164017.1|1718890_1719709_-	DUF2479 domain-containing protein	NA	A0A1L2JXK8	Streptococcus_phage	88.6	2.0e-137
WP_023164016.1|1719721_1722475_-	peptidase M23	NA	A0A1P8BMA1	Lactococcus_phage	96.4	0.0e+00
WP_023164015.1|1722474_1723236_-	hypothetical protein	NA	Q9AYV7	Lactococcus_phage	98.0	8.8e-140
WP_023164355.1|1723249_1726063_-|tail	phage tail tape measure protein	tail	Q9G097	Lactococcus_phage	95.9	3.0e-286
WP_043994770.1|1726077_1726341_-	hypothetical protein	NA	Q9AZ59	Lactococcus_phage	100.0	5.0e-42
WP_014570725.1|1726436_1726772_-	hypothetical protein	NA	Q77RZ7	Lactococcus_phage	99.1	4.2e-54
WP_023164013.1|1726887_1727385_-|tail	phage major tail protein, TP901-1 family	tail	A0A1P8BKV6	Lactococcus_phage	97.0	2.4e-85
WP_023164012.1|1727395_1727785_-	hypothetical protein	NA	A0A1P8BKT6	Lactococcus_phage	99.2	5.6e-66
WP_014570728.1|1727781_1728120_-	HK97 gp10 family phage protein	NA	Q77K21	Lactococcus_phage	97.3	7.3e-54
WP_023164011.1|1728116_1728428_-	hypothetical protein	NA	A0A1P8BLP2	Lactococcus_phage	95.1	1.5e-53
WP_023164010.1|1728424_1728757_-|head,tail	phage head-tail connector protein	head,tail	A0A1P8BMC5	Lactococcus_phage	99.1	9.3e-54
WP_080681443.1|1728778_1729045_-	Ig domain-containing protein	NA	A0A1P8BLK6	Lactococcus_phage	88.7	4.9e-21
WP_023164008.1|1729044_1729908_-	hypothetical protein	NA	A0A1P8BKP7	Lactococcus_phage	97.9	4.2e-154
WP_023164007.1|1729926_1730556_-	DUF4355 domain-containing protein	NA	Q9AYW7	Lactococcus_phage	82.7	1.9e-63
WP_023164006.1|1730740_1731088_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023164005.1|1731185_1732226_-	hypothetical protein	NA	A0A1P8BM04	Lactococcus_phage	97.7	4.8e-189
WP_023164004.1|1732229_1733606_-|portal	phage portal protein	portal	Q9AZ65	Lactococcus_phage	93.0	8.8e-239
WP_023164003.1|1733626_1735009_-|terminase	terminase	terminase	Q8LTR4	Lactococcus_phage	98.5	3.4e-267
WP_023164002.1|1735001_1735412_-|terminase	terminase	terminase	Q9AZ67	Lactococcus_phage	98.5	1.6e-66
WP_023164000.1|1735583_1736177_-	hypothetical protein	NA	D2IYV7	Enterococcus_phage	27.6	4.9e-13
WP_014573151.1|1736360_1736783_-	DUF722 domain-containing protein	NA	Q9AYX5	Lactococcus_phage	100.0	5.5e-75
WP_023164356.1|1736863_1737076_-	XRE family transcriptional regulator	NA	Q9AZN3	Lactococcus_phage	92.9	4.7e-27
WP_023163998.1|1737190_1737433_-	hypothetical protein	NA	Q8LTL7	Lactococcus_phage	71.2	1.4e-27
WP_023164358.1|1737857_1738022_-	hypothetical protein	NA	Q94M83	Lactococcus_phage	48.4	9.4e-07
WP_023164359.1|1738018_1738162_-	hypothetical protein	NA	A0A1P8BMD9	Lactococcus_phage	97.9	4.6e-18
WP_023164360.1|1738208_1738889_-	hypothetical protein	NA	A5GYP2	Lactococcus_phage	97.3	1.7e-126
WP_023164361.1|1738885_1739125_-	hypothetical protein	NA	A0A1W6JL86	Lactococcus_phage	49.3	7.5e-13
WP_109009800.1|1739114_1739303_-	hypothetical protein	NA	Q77MW5	Lactococcus_phage	92.0	7.2e-19
WP_023164363.1|1739744_1740020_-	hypothetical protein	NA	A0A1P8BLI3	Lactococcus_phage	92.0	5.5e-44
WP_023164364.1|1740022_1740442_-	dUTP diphosphatase	NA	A0A1P8BMQ4	Lactococcus_phage	97.1	4.3e-72
WP_023164365.1|1740438_1740678_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023164366.1|1740674_1740995_-	hypothetical protein	NA	V9VEU7	Lactococcus_phage	83.7	6.9e-46
WP_023164367.1|1740991_1741684_-	DUF1642 domain-containing protein	NA	Q9AZU5	Lactococcus_phage	49.8	1.2e-42
WP_043994640.1|1741699_1741948_-	hypothetical protein	NA	A0A1P8BLV4	Lactococcus_phage	59.8	2.2e-15
WP_014570535.1|1741956_1742163_-	hypothetical protein	NA	Q9MC28	Lactococcus_phage	100.0	4.8e-32
WP_023164370.1|1742495_1742660_-	hypothetical protein	NA	A0A1P8BKY2	Lactococcus_phage	98.1	5.5e-23
WP_023164371.1|1742668_1743559_-	prepilin peptidase	NA	Q38098	Lactococcus_phage	99.7	1.0e-163
WP_023164372.1|1743568_1744375_-	replication protein	NA	A0A1P8BL25	Lactococcus_phage	98.1	4.4e-57
WP_023164373.1|1744602_1745379_-	hypothetical protein	NA	Q9AZP9	Lactococcus_phage	97.7	6.0e-144
WP_023164374.1|1745378_1746185_-	hypothetical protein	NA	Q9AZQ0	Lactococcus_phage	94.8	4.3e-137
WP_023164375.1|1746284_1746527_-	hypothetical protein	NA	A0A1B1IMF7	Lactococcus_phage	93.8	7.1e-35
WP_023164376.1|1746529_1746799_-	hypothetical protein	NA	A0A059NT46	Lactococcus_phage	96.1	5.1e-34
WP_021214422.1|1746878_1747217_-	hypothetical protein	NA	A0A1B1IMQ1	Lactococcus_phage	100.0	2.6e-59
WP_023164377.1|1747230_1747968_-	AntA/AntB antirepressor	NA	A0A1P8BKE3	Lactococcus_phage	99.2	2.5e-139
WP_003129906.1|1747979_1748222_-	hypothetical protein	NA	Q77JL3	Lactococcus_phage	97.5	2.0e-37
WP_023164378.1|1748375_1748846_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043994642.1|1749306_1750143_+	helix-turn-helix domain-containing protein	NA	Q9AZQ8	Lactococcus_phage	98.9	1.9e-156
WP_023164381.1|1750192_1751332_+|integrase	site-specific integrase	integrase	A0A1B1IMP1	Lactococcus_phage	97.9	9.2e-210
WP_003129376.1|1751436_1752510_-	carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.3	1.5e-60
1751438:1751467	attR	TATTTTTTGAAGTTATCCATGAGATCCATG	NA	NA	NA	NA
WP_023164382.1|1752572_1753505_-	aspartate carbamoyltransferase catalytic subunit	NA	M1HWF9	Paramecium_bursaria_Chlorella_virus	30.2	1.8e-22
>prophage 9
NC_022593	Lactococcus lactis subsp. lactis KLDS 4.0325, complete sequence	2589250	1879310	1889088	2589250	tRNA	Prochlorococcus_phage(33.33%)	9	NA	NA
WP_003130886.1|1879310_1880072_-	phosphate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.0	1.5e-17
WP_003130885.1|1880237_1881047_-	phosphate ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.5	7.0e-10
WP_003130884.1|1881080_1881974_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_021722156.1|1881973_1882897_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_017864882.1|1883017_1883869_-	phosphate ABC transporter substrate-binding protein	NA	E3SNT9	Prochlorococcus_phage	27.3	4.2e-05
WP_003130880.1|1884215_1885112_-	phosphate ABC transporter substrate-binding protein	NA	E3SM63	Prochlorococcus_phage	32.4	7.2e-08
WP_023164435.1|1885389_1885857_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	56.6	4.7e-43
WP_023164436.1|1885888_1886383_-	esterase	NA	NA	NA	NA	NA
WP_023164437.1|1886469_1889088_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	33.3	4.2e-64
>prophage 10
NC_022593	Lactococcus lactis subsp. lactis KLDS 4.0325, complete sequence	2589250	1903851	1920058	2589250	integrase	Lactococcus_phage(88.24%)	21	1902059:1902074	1916309:1916324
1902059:1902074	attL	TTATTTTACTGACAGA	NA	NA	NA	NA
WP_023164445.1|1903851_1905264_-	hypothetical protein	NA	V9QJ85	Oenococcus_phage	23.0	1.1e-07
WP_080681476.1|1905566_1905686_-	GNAT family acetyltransferase	NA	NA	NA	NA	NA
WP_023164447.1|1905715_1906105_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023164448.1|1906663_1906900_-	hypothetical protein	NA	A0A1P8BLF8	Lactococcus_phage	70.2	1.6e-12
WP_023164449.1|1906997_1907228_-	hypothetical protein	NA	A0A1P8BME4	Lactococcus_phage	94.7	2.5e-37
WP_023164451.1|1907839_1908202_-	hypothetical protein	NA	Q9AZG6	Lactococcus_phage	61.7	3.9e-29
WP_023164452.1|1908217_1908790_-	hypothetical protein	NA	Q9AZG7	Lactococcus_phage	94.7	1.8e-92
WP_010906212.1|1908951_1909158_-	hypothetical protein	NA	Q9AZG9	Lactococcus_phage	100.0	1.6e-32
WP_003132807.1|1909176_1909359_-	hypothetical protein	NA	Q9AZH0	Lactococcus_phage	98.3	5.3e-27
WP_080554626.1|1909728_1910043_-	hypothetical protein	NA	Q9AZH1	Lactococcus_phage	94.2	4.1e-51
WP_023164454.1|1911435_1911705_-	hypothetical protein	NA	Q9AZH3	Lactococcus_phage	98.9	3.6e-40
WP_023163719.1|1911701_1911854_-	hypothetical protein	NA	Q9AZH4	Lactococcus_phage	86.0	1.7e-15
WP_011675324.1|1912035_1912206_-	DUF1655 domain-containing protein	NA	Q9AZH6	Lactococcus_phage	94.6	5.1e-24
WP_058217209.1|1912276_1912414_-	hypothetical protein	NA	Q9AZH7	Lactococcus_phage	89.7	4.0e-11
WP_023164457.1|1913071_1913263_-	XRE family transcriptional regulator	NA	R9QNG3	Lactococcus_phage	79.4	4.6e-21
WP_023164458.1|1913261_1913900_+	XRE family transcriptional regulator	NA	R9QMZ5	Lactococcus_phage	30.6	1.4e-08
WP_023164459.1|1913974_1915186_+|integrase	site-specific integrase	integrase	Q9AZI0	Lactococcus_phage	54.6	1.2e-117
WP_023164460.1|1915306_1916221_-	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	26.1	1.9e-11
WP_003132795.1|1916377_1916890_-	HD domain-containing protein	NA	NA	NA	NA	NA
1916309:1916324	attR	TTATTTTACTGACAGA	NA	NA	NA	NA
WP_010906113.1|1917222_1917456_+	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_023164461.1|1917553_1920058_-	ATP-dependent RecD-like DNA helicase	NA	A0A1W6JK95	Lactococcus_phage	25.9	1.2e-44
>prophage 11
NC_022593	Lactococcus lactis subsp. lactis KLDS 4.0325, complete sequence	2589250	2037788	2118530	2589250	holin,tRNA,capsid,head,tail,integrase,protease,portal,terminase	Lactococcus_phage(74.14%)	98	2077671:2077693	2118550:2118572
WP_010906168.1|2037788_2039135_-|tRNA	cysteine--tRNA ligase	tRNA	A0A2K9V966	Bandra_megavirus	29.5	3.1e-47
WP_012898419.1|2039147_2039741_-	DUF1211 domain-containing protein	NA	NA	NA	NA	NA
WP_003132365.1|2039754_2040354_-	serine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003132366.1|2040460_2041231_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003132367.1|2041439_2043761_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_023164495.1|2044044_2045190_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012898422.1|2045554_2046520_+	ribose-phosphate diphosphokinase	NA	A0A2K9L2G2	Tupanvirus	32.8	1.0e-36
WP_010906170.1|2046641_2047073_-	universal stress protein	NA	NA	NA	NA	NA
WP_043994672.1|2047312_2048440_+	cysteine desulfurase	NA	H7BUW1	unidentified_phage	36.4	2.9e-30
WP_003132372.1|2048463_2048808_+	cysteine desulfurase	NA	NA	NA	NA	NA
WP_003132374.1|2048898_2050086_-	elongation factor Tu	NA	A0A076FFS6	Aureococcus_anophage	29.4	2.0e-34
WP_003132378.1|2050328_2050511_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014570713.1|2050569_2050686_+	DUF4044 domain-containing protein	NA	NA	NA	NA	NA
WP_023164497.1|2050743_2053542_-|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.9	4.8e-82
WP_003132384.1|2053857_2054784_-	DivIVA domain-containing protein	NA	NA	NA	NA	NA
WP_010906173.1|2054840_2055632_-	cell division protein	NA	NA	NA	NA	NA
WP_010906174.1|2055628_2055904_-	YggT family protein	NA	NA	NA	NA	NA
WP_003132390.1|2055903_2056494_-	cell division protein SepF	NA	NA	NA	NA	NA
WP_043994675.1|2056537_2057206_-	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_003132392.1|2057209_2058463_-	cell division protein FtsZ	NA	NA	NA	NA	NA
WP_023164498.1|2058493_2059864_-	cell division protein FtsA	NA	NA	NA	NA	NA
WP_010906175.1|2060024_2060894_-	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	35.3	3.8e-14
WP_012898430.1|2061006_2061735_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	A0A2D1A6G0	Rhodococcus_phage	27.2	5.5e-06
WP_010906176.1|2061880_2062999_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_023164499.1|2063129_2063975_-	aldo/keto reductase	NA	A0A1V0SDE7	Indivirus	32.9	4.8e-30
WP_003132399.1|2063986_2065315_-	MFS transporter	NA	NA	NA	NA	NA
WP_021722576.1|2065480_2066359_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003130788.1|2066374_2066779_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010906180.1|2066860_2068171_-	aminopeptidase C	NA	R4TV59	Phaeocystis_globosa_virus	31.5	9.7e-62
WP_023164501.1|2068299_2068893_-	HD domain-containing protein	NA	NA	NA	NA	NA
WP_003130794.1|2068950_2069631_-	5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA	NA	NA	NA	NA
WP_003130796.1|2069662_2069941_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012898439.1|2069933_2070518_-	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_003130798.1|2070622_2071999_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A0G2Y8M0	Acanthamoeba_polyphaga_mimivirus	35.3	7.1e-31
WP_012898440.1|2072226_2073015_+	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	33.6	1.7e-32
WP_010906184.1|2073093_2073363_-	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_003130801.1|2073544_2075428_-	Stk1 family PASTA domain-containing Ser/Thr kinase	NA	A0A1V0SDC3	Indivirus	31.6	3.1e-21
WP_003130802.1|2075427_2076204_-	Stp1/IreP family PP2C-type Ser/Thr phosphatase	NA	NA	NA	NA	NA
WP_014570715.1|2076284_2077559_-	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA	NA
2077671:2077693	attL	AACGTAACTAAAAACGTAACTAA	NA	NA	NA	NA
WP_109009802.1|2078193_2078370_+	hypothetical protein	NA	A5GYL5	Lactococcus_phage	85.7	2.3e-19
WP_023164503.1|2078485_2078908_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023164504.1|2078907_2079210_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023164505.1|2079223_2079751_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023164506.1|2079943_2080723_-	muramidase	NA	Q38323	Lactococcus_phage	98.5	1.5e-126
WP_023164507.1|2080722_2081010_-|holin	phage holin	holin	Q9AZL0	Lactococcus_phage	98.9	1.6e-46
WP_023164508.1|2081022_2081373_-	hypothetical protein	NA	A0A1P8BKU2	Lactococcus_phage	99.1	2.0e-54
WP_023164509.1|2081385_2081616_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023164511.1|2085645_2087181_-	hypothetical protein	NA	Q9AZL3	Lactococcus_phage	43.3	1.5e-101
WP_043994676.1|2087180_2091314_-	hypothetical protein	NA	Q9AZL4	Lactococcus_phage	89.2	7.0e-199
WP_023164513.1|2091483_2091834_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023164514.1|2091893_2092499_-|tail	tail protein	tail	Q9AZL7	Lactococcus_phage	97.5	1.3e-106
WP_010905383.1|2092500_2092896_-	DUF806 family protein	NA	Q9AZL8	Lactococcus_phage	100.0	1.4e-67
WP_043994677.1|2092892_2093378_-	hypothetical protein	NA	Q9AZL9	Lactococcus_phage	99.4	2.0e-84
WP_010905381.1|2093374_2093710_-|head,tail	head-tail adaptor protein	head,tail	Q9AZM0	Lactococcus_phage	100.0	5.9e-56
WP_010905380.1|2093696_2094002_-	hypothetical protein	NA	Q9AZM1	Lactococcus_phage	100.0	4.4e-50
WP_023164516.1|2094012_2095326_-|capsid	phage major capsid protein	capsid	Q9AZM2	Lactococcus_phage	90.8	1.1e-187
WP_023164517.1|2095315_2095903_-|head,protease	HK97 family phage prohead protease	head,protease	Q9AZM3	Lactococcus_phage	98.5	2.4e-105
WP_023164518.1|2095902_2096982_-|portal	phage portal protein	portal	Q9AZM4	Lactococcus_phage	99.7	1.2e-198
WP_023164519.1|2096978_2097143_-	hypothetical protein	NA	Q9AZM5	Lactococcus_phage	96.3	5.7e-20
WP_023164520.1|2097151_2098966_-|terminase	terminase large subunit	terminase	Q9AZM6	Lactococcus_phage	99.8	0.0e+00
WP_023164521.1|2098965_2099358_-|terminase	phage terminase small subunit P27 family	terminase	Q9AZM7	Lactococcus_phage	38.9	6.8e-19
WP_014573150.1|2099554_2100058_-	HNH endonuclease	NA	Q9AZM8	Lactococcus_phage	99.4	1.2e-92
WP_015966900.1|2100341_2100764_-	DUF722 domain-containing protein	NA	Q9AZ68	Lactococcus_phage	100.0	5.0e-52
WP_023164523.1|2100844_2101057_-	XRE family transcriptional regulator	NA	Q9AZN3	Lactococcus_phage	97.1	1.1e-28
WP_023164524.1|2101028_2101349_-	DUF1359 domain-containing protein	NA	Q9AZZ2	Lactococcus_phage	91.7	5.5e-43
WP_023164172.1|2102368_2103157_+	peptide transporter	NA	Q7M293	Enterobacteria_phage	27.3	5.2e-10
WP_023164358.1|2103773_2103938_-	hypothetical protein	NA	Q94M83	Lactococcus_phage	48.4	9.4e-07
WP_023164359.1|2103934_2104078_-	hypothetical protein	NA	A0A1P8BMD9	Lactococcus_phage	97.9	4.6e-18
WP_023164360.1|2104124_2104805_-	hypothetical protein	NA	A5GYP2	Lactococcus_phage	97.3	1.7e-126
WP_023164361.1|2104801_2105041_-	hypothetical protein	NA	A0A1W6JL86	Lactococcus_phage	49.3	7.5e-13
WP_109009800.1|2105030_2105219_-	hypothetical protein	NA	Q77MW5	Lactococcus_phage	92.0	7.2e-19
WP_023164525.1|2105608_2106028_-	dUTP diphosphatase	NA	Q9AYX8	Lactococcus_phage	99.3	2.5e-72
WP_023164526.1|2106024_2106588_-	DUF1642 domain-containing protein	NA	Q9AYX9	Lactococcus_phage	74.6	7.1e-70
WP_021037750.1|2106580_2106763_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023164527.1|2106826_2107459_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011835825.1|2107473_2107671_-	DUF1125 domain-containing protein	NA	NA	NA	NA	NA
WP_043994683.1|2107667_2107874_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014570535.1|2107882_2108089_-	hypothetical protein	NA	Q9MC28	Lactococcus_phage	100.0	4.8e-32
WP_080681458.1|2108196_2108673_-	hypothetical protein	NA	A5GZ50	Lactococcus_phage	92.6	4.1e-71
WP_023164530.1|2108596_2108761_-	hypothetical protein	NA	A0A1P8BKY2	Lactococcus_phage	98.1	5.5e-23
WP_023164371.1|2108770_2109661_-	prepilin peptidase	NA	Q38098	Lactococcus_phage	99.7	1.0e-163
WP_023164531.1|2109670_2110432_-	DNA replication protein	NA	A0A1P8BKE9	Lactococcus_phage	79.1	4.0e-108
WP_023164532.1|2110556_2110982_-	single-stranded DNA-binding protein	NA	Q9MC32	Lactococcus_phage	98.6	3.6e-74
WP_023164533.1|2110974_2111733_-	recombinase	NA	Q0ILF6	Lactococcus_phage	97.6	3.4e-144
WP_010905688.1|2111741_2112260_-	hypothetical protein	NA	Q9XJE3	Lactococcus_phage	100.0	6.3e-89
WP_010905687.1|2112375_2112591_-	DUF1408 domain-containing protein	NA	Q38272	Lactococcus_phage	100.0	2.4e-34
WP_011834777.1|2112693_2112972_+	hypothetical protein	NA	A0A059NT68	Lactococcus_phage	100.0	1.1e-47
WP_023164535.1|2112926_2113160_-	hypothetical protein	NA	A0A059NT46	Lactococcus_phage	98.7	1.2e-34
WP_023164536.1|2113252_2113522_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023164537.1|2113534_2114293_-	antirepressor	NA	A0A1B1IMQ3	Lactococcus_phage	86.2	2.5e-118
WP_011835843.1|2114304_2114553_-	XRE family transcriptional regulator	NA	J7KK54	Streptococcus_phage	51.7	2.2e-07
WP_015966961.1|2114655_2114922_+	hypothetical protein	NA	Q38335	Lactococcus_phage	100.0	7.0e-44
WP_023164538.1|2114915_2115110_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023164540.1|2115465_2115699_-	hypothetical protein	NA	Q9AZQ6	Lactococcus_phage	94.8	1.8e-35
WP_023164541.1|2115994_2116492_+	helix-turn-helix domain-containing protein	NA	J7KJ52	Streptococcus_phage	50.4	1.3e-22
WP_023164542.1|2116497_2116932_+	zinc peptidase	NA	NA	NA	NA	NA
WP_014573177.1|2116945_2117281_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023164543.1|2117348_2118530_+|integrase	site-specific integrase	integrase	Q9AZK8	Lactococcus_phage	47.2	1.3e-89
2118550:2118572	attR	AACGTAACTAAAAACGTAACTAA	NA	NA	NA	NA
>prophage 12
NC_022593	Lactococcus lactis subsp. lactis KLDS 4.0325, complete sequence	2589250	2217534	2230575	2589250	integrase	Lactococcus_phage(94.12%)	21	2216834:2216851	2230662:2230679
2216834:2216851	attL	TTTTAACATAGTTCTATT	NA	NA	NA	NA
WP_023164569.1|2217534_2217855_-	sigma-70 family RNA polymerase sigma factor	NA	Q9AZD9	Lactococcus_phage	95.3	1.3e-49
WP_023164570.1|2217957_2218287_-	hypothetical protein	NA	Q9AZE0	Lactococcus_phage	94.5	7.3e-51
WP_023164571.1|2218431_2220066_-	DNA primase	NA	Q9AZI5	Lactococcus_phage	90.0	1.2e-287
WP_023164572.1|2220076_2220871_-	hypothetical protein	NA	Q9AZI6	Lactococcus_phage	91.7	1.2e-144
WP_023164573.1|2220874_2221204_-	hypothetical protein	NA	Q9AZI7	Lactococcus_phage	94.4	1.2e-53
WP_014570844.1|2221200_2221512_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023164574.1|2221508_2221763_-	hypothetical protein	NA	Q9AZE9	Lactococcus_phage	86.7	1.4e-36
WP_023164575.1|2221759_2221999_-	hypothetical protein	NA	Q9AZJ0	Lactococcus_phage	96.2	2.6e-37
WP_023164576.1|2222041_2222323_-	hypothetical protein	NA	Q9AZJ1	Lactococcus_phage	94.6	8.7e-45
WP_023164578.1|2222468_2222999_-	hypothetical protein	NA	Q9AZJ3	Lactococcus_phage	63.1	1.5e-50
WP_023164579.1|2222995_2223193_-	DUF1655 domain-containing protein	NA	Q9AZF2	Lactococcus_phage	93.4	5.4e-25
WP_023164580.1|2223207_2223429_-	hypothetical protein	NA	NA	NA	NA	NA
WP_101913874.1|2223642_2223819_-	CopG family transcriptional regulator	NA	NA	NA	NA	NA
WP_023164582.1|2224082_2224772_-	hypothetical protein	NA	R9QNB1	Lactococcus_phage	79.1	6.2e-92
WP_023164583.1|2224947_2225139_-	hypothetical protein	NA	R9QNG3	Lactococcus_phage	85.7	4.9e-23
WP_023164584.1|2225277_2225742_+	helix-turn-helix domain-containing protein	NA	R9QMZ5	Lactococcus_phage	36.4	4.4e-09
WP_023164585.1|2225807_2226002_+	hypothetical protein	NA	Q9AZK1	Lactococcus_phage	95.3	1.5e-27
WP_014734881.1|2226290_2226548_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023164587.1|2226828_2227725_+	hypothetical protein	NA	A3QSC6	Clostridium_virus	33.3	8.2e-44
WP_023164588.1|2228781_2228946_+	hypothetical protein	NA	Q9AZK6	Lactococcus_phage	90.7	2.1e-19
WP_023164589.1|2229393_2230575_+|integrase	site-specific integrase	integrase	Q9AZK8	Lactococcus_phage	45.5	7.6e-90
2230662:2230679	attR	TTTTAACATAGTTCTATT	NA	NA	NA	NA
>prophage 13
NC_022593	Lactococcus lactis subsp. lactis KLDS 4.0325, complete sequence	2589250	2339902	2382013	2589250	capsid,holin,transposase,portal	Lactococcus_phage(93.33%)	48	NA	NA
WP_023164616.1|2339902_2340682_-	muramidase	NA	Q38323	Lactococcus_phage	98.1	3.3e-126
WP_023164507.1|2340681_2340969_-|holin	phage holin	holin	Q9AZL0	Lactococcus_phage	98.9	1.6e-46
WP_023164617.1|2340994_2342557_-	DUF2479 domain-containing protein	NA	Q9AZR3	Lactococcus_phage	96.0	7.1e-245
WP_011676503.1|2342568_2342793_-|holin	holin	holin	A0A1B1IMU8	Lactococcus_phage	100.0	6.1e-33
WP_023164509.1|2342805_2343036_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023164618.1|2343047_2346080_-	hypothetical protein	NA	A0A1B1IMK1	Lactococcus_phage	57.8	4.9e-282
WP_023164619.1|2346079_2347603_-	hypothetical protein	NA	A0A1B1IM42	Lactococcus_phage	37.1	1.3e-81
WP_003331415.1|2348810_2350034_+|transposase	IS21-like element IS712 family transposase	transposase	A0A059NT83	Lactococcus_phage	100.0	4.9e-233
WP_003331414.1|2350045_2350804_+	ATPase AAA	NA	A0A059NT77	Lactococcus_phage	100.0	5.3e-137
WP_023164622.1|2352379_2353087_-	hypothetical protein	NA	A5GYM7	Lactococcus_phage	99.1	6.9e-123
WP_003131323.1|2353102_2353510_-	hypothetical protein	NA	A0A1B1IMQ4	Lactococcus_phage	100.0	1.2e-66
WP_014570559.1|2353566_2354043_-	hypothetical protein	NA	A5GYM5	Lactococcus_phage	100.0	3.0e-85
WP_023164623.1|2354053_2354488_-	hypothetical protein	NA	A5GYM4	Lactococcus_phage	99.3	7.4e-75
WP_003131320.1|2354487_2354817_-	hypothetical protein	NA	A5GYM3	Lactococcus_phage	100.0	4.4e-56
WP_014570557.1|2354813_2355158_-	hypothetical protein	NA	A5GYM2	Lactococcus_phage	100.0	3.1e-60
WP_014570556.1|2355147_2355549_-	hypothetical protein	NA	A5GYM1	Lactococcus_phage	100.0	6.8e-59
WP_014570555.1|2355622_2355859_-	Ig domain-containing protein	NA	A5GYM0	Lactococcus_phage	100.0	4.2e-32
WP_023164624.1|2355887_2356805_-|capsid	phage capsid protein	capsid	A5GYL9	Lactococcus_phage	99.0	1.4e-163
WP_023164625.1|2356820_2357870_-	DNA methyltransferase	NA	A0A1B1IMM2	Lactococcus_phage	94.0	8.4e-157
WP_023164626.1|2357885_2358716_-|capsid	phage capsid protein	capsid	A0A1B1IM23	Lactococcus_phage	98.2	7.1e-151
WP_023164627.1|2358708_2360238_-|portal	phage portal protein	portal	A5GYL6	Lactococcus_phage	99.0	3.2e-290
WP_109009804.1|2360250_2361693_-	hypothetical protein	NA	A5GYP8	Lactococcus_phage	99.0	1.5e-281
WP_023164629.1|2361682_2362492_-	HNH endonuclease	NA	A0A1X9I5J3	Streptococcus_phage	55.9	1.1e-79
WP_023164630.1|2362663_2363053_-	DUF722 domain-containing protein	NA	A5GYP6	Lactococcus_phage	97.7	6.0e-68
WP_023164631.1|2363416_2363638_-	hypothetical protein	NA	A0A1P8BL06	Lactococcus_phage	98.6	1.9e-34
WP_023164632.1|2363646_2363841_-	hypothetical protein	NA	Q9AZT9	Lactococcus_phage	96.9	2.8e-34
WP_023164633.1|2363837_2364047_-	hypothetical protein	NA	E0YIV8	Lactococcus_phage	98.6	4.4e-33
WP_023164634.1|2364047_2364263_-	hypothetical protein	NA	E0YIV7	Lactococcus_phage	93.0	1.1e-34
WP_023164635.1|2364309_2364504_-	hypothetical protein	NA	A0A1W6JL55	Lactococcus_phage	68.8	5.3e-17
WP_023164636.1|2364520_2365171_-	hypothetical protein	NA	A0A1P8BL14	Lactococcus_phage	98.6	5.4e-122
WP_043994700.1|2365157_2365487_-	hypothetical protein	NA	A0A1W6JKT3	Lactococcus_phage	64.7	3.3e-27
WP_109009806.1|2365804_2365984_-	hypothetical protein	NA	A0A0D3MT42	Lactococcus_phage	88.1	7.1e-24
WP_109009808.1|2366070_2366256_-	hypothetical protein	NA	A0A1P8BKA8	Lactococcus_phage	93.4	4.0e-22
WP_023164641.1|2366566_2367475_-	DnaD domain protein	NA	Q8LTN2	Lactococcus_phage	69.5	1.7e-41
WP_023164642.1|2367702_2368773_-	DUF1351 domain-containing protein	NA	A5GZ46	Lactococcus_phage	86.3	6.1e-139
WP_023164643.1|2368774_2369641_-	hypothetical protein	NA	A0A286QQF5	Streptococcus_phage	43.4	2.6e-39
WP_023164644.1|2369746_2369923_-	hypothetical protein	NA	A0A059NT92	Lactococcus_phage	94.8	5.3e-24
WP_023164645.1|2369919_2370168_-	hypothetical protein	NA	A5GZ43	Lactococcus_phage	93.9	1.0e-33
WP_003130605.1|2370299_2370482_-	hypothetical protein	NA	A5GZ68	Lactococcus_phage	100.0	2.4e-27
WP_080681481.1|2370497_2371148_-	hypothetical protein	NA	A0A1P8BKT1	Lactococcus_phage	94.9	1.7e-112
WP_023164648.1|2371266_2371476_-	XRE family transcriptional regulator	NA	A0A1P8BKS6	Lactococcus_phage	100.0	1.5e-33
WP_023164649.1|2371668_2372094_+	XRE family transcriptional regulator	NA	A0A1B1IMJ4	Lactococcus_phage	100.0	8.5e-76
WP_023164650.1|2372104_2372689_+	hypothetical protein	NA	A0A1B1ILZ7	Lactococcus_phage	96.9	2.5e-110
WP_023164651.1|2372744_2373284_+	hypothetical protein	NA	A5GZ63	Lactococcus_phage	99.4	2.8e-92
WP_023164652.1|2373403_2374861_+	recombinase family protein	NA	A0A1B1IM01	Lactococcus_phage	99.4	2.8e-275
WP_010906319.1|2375011_2376085_-	type II secretion system F family protein	NA	NA	NA	NA	NA
WP_031561106.1|2375978_2376917_-	type II/IV secretion system protein	NA	NA	NA	NA	NA
WP_023164655.1|2377036_2382013_-	PolC-type DNA polymerase III	NA	A0A0K2SUJ2	Clostridium_phage	37.2	1.6e-19
>prophage 14
NC_022593	Lactococcus lactis subsp. lactis KLDS 4.0325, complete sequence	2589250	2466374	2483381	2589250	head,bacteriocin,protease	Lactococcus_phage(88.89%)	26	NA	NA
WP_010905061.1|2466374_2466539_-|bacteriocin	bacteriocin	bacteriocin	Q9AZK6	Lactococcus_phage	100.0	7.9e-22
WP_023164684.1|2467962_2468403_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023164685.1|2468399_2469395_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023164686.1|2469484_2469679_-	hypothetical protein	NA	Q9AZK1	Lactococcus_phage	96.9	6.7e-28
WP_023164688.1|2470016_2470643_-	XRE family transcriptional regulator	NA	A0A1P8BMG3	Lactococcus_phage	44.8	4.3e-15
WP_023164689.1|2470925_2471132_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
WP_023164690.1|2471133_2471412_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043994704.1|2471411_2471585_+	hypothetical protein	NA	A0A1B1IMG1	Lactococcus_phage	94.7	4.4e-23
WP_023163716.1|2471767_2471962_+	DUF1655 domain-containing protein	NA	Q9AZJ4	Lactococcus_phage	96.9	1.5e-27
WP_023164692.1|2471966_2472578_+	hypothetical protein	NA	Q9AZJ3	Lactococcus_phage	61.6	5.0e-45
WP_023164693.1|2472570_2472852_+	hypothetical protein	NA	Q9AZJ1	Lactococcus_phage	93.5	5.1e-45
WP_023164694.1|2472894_2473134_+	hypothetical protein	NA	Q9AZJ0	Lactococcus_phage	92.4	4.8e-36
WP_023164695.1|2473130_2473385_+	hypothetical protein	NA	Q9AZE9	Lactococcus_phage	88.0	1.8e-36
WP_023164696.1|2473381_2473693_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023164573.1|2473689_2474019_+	hypothetical protein	NA	Q9AZI7	Lactococcus_phage	94.4	1.2e-53
WP_023164697.1|2474022_2474817_+	hypothetical protein	NA	Q9AZI6	Lactococcus_phage	91.3	2.1e-144
WP_080681483.1|2476708_2476864_+	hypothetical protein	NA	Q9AZE3	Lactococcus_phage	92.2	4.5e-19
WP_023164698.1|2476891_2477500_+	hypothetical protein	NA	Q9AZE2	Lactococcus_phage	94.6	3.1e-95
WP_023164699.1|2477508_2478099_+|head,protease	HK97 family phage prohead protease	head,protease	Q9AZE1	Lactococcus_phage	98.0	7.6e-107
WP_023164700.1|2478316_2478646_+	hypothetical protein	NA	Q9AZE0	Lactococcus_phage	94.4	7.3e-51
WP_043994857.1|2478748_2479069_+	sigma-70 family RNA polymerase sigma factor	NA	Q9AZD9	Lactococcus_phage	94.3	5.1e-49
WP_003131983.1|2479786_2479987_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003131984.1|2480045_2481386_-	type I glutamate--ammonia ligase	NA	A0A2P1EM84	Moumouvirus	23.7	1.8e-10
WP_003131985.1|2481447_2481813_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010906378.1|2481913_2482351_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA	NA
WP_023164702.1|2482763_2483381_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.2	5.9e-09
>prophage 15
NC_022593	Lactococcus lactis subsp. lactis KLDS 4.0325, complete sequence	2589250	2530162	2549705	2589250	head,bacteriocin,integrase,protease	Lactococcus_phage(89.47%)	27	2530056:2530075	2544966:2544985
2530056:2530075	attL	ATTCACTTGAACAATGAATA	NA	NA	NA	NA
WP_023164717.1|2530162_2531341_-|integrase	site-specific integrase	integrase	Q9AZK8	Lactococcus_phage	47.6	2.8e-92
WP_023164718.1|2531787_2531952_-|bacteriocin	bacteriocin	bacteriocin	Q9AZK6	Lactococcus_phage	96.3	3.0e-21
WP_011834160.1|2532920_2533247_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023164719.1|2534203_2534398_-	hypothetical protein	NA	Q9AZK1	Lactococcus_phage	95.3	1.1e-27
WP_023164720.1|2534538_2535009_-	XRE family transcriptional regulator	NA	U3PBN8	Staphylococcus_phage	40.8	1.4e-07
WP_023164721.1|2535139_2535370_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023164722.1|2535531_2536200_+	hypothetical protein	NA	R9QNB1	Lactococcus_phage	80.6	2.7e-92
WP_109009810.1|2536541_2536664_+	CopG family transcriptional regulator	NA	NA	NA	NA	NA
WP_023164580.1|2536850_2537072_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023164579.1|2537086_2537284_+	DUF1655 domain-containing protein	NA	Q9AZF2	Lactococcus_phage	93.4	5.4e-25
WP_023164723.1|2537280_2537814_+	hypothetical protein	NA	Q9AZJ3	Lactococcus_phage	63.2	2.0e-50
WP_023164724.1|2537806_2538088_+	hypothetical protein	NA	Q9AZJ1	Lactococcus_phage	95.7	2.7e-46
WP_023164575.1|2538130_2538370_+	hypothetical protein	NA	Q9AZJ0	Lactococcus_phage	96.2	2.6e-37
WP_023164574.1|2538366_2538621_+	hypothetical protein	NA	Q9AZE9	Lactococcus_phage	86.7	1.4e-36
WP_014570844.1|2538617_2538929_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023164573.1|2538925_2539255_+	hypothetical protein	NA	Q9AZI7	Lactococcus_phage	94.4	1.2e-53
WP_023164572.1|2539258_2540053_+	hypothetical protein	NA	Q9AZI6	Lactococcus_phage	91.7	1.2e-144
WP_023164725.1|2540063_2541692_+	DNA primase	NA	Q9AZI5	Lactococcus_phage	93.4	2.6e-298
WP_003131978.1|2541908_2542091_+	hypothetical protein	NA	Q9AZE3	Lactococcus_phage	93.1	7.9e-23
WP_023164726.1|2542116_2542725_+	hypothetical protein	NA	Q9AZE2	Lactococcus_phage	95.0	1.6e-96
WP_023164727.1|2542733_2543324_+|head,protease	HK97 family phage prohead protease	head,protease	Q9AZE1	Lactococcus_phage	95.9	2.3e-103
WP_023164728.1|2543536_2543866_+	hypothetical protein	NA	Q9AZE0	Lactococcus_phage	93.6	2.8e-50
WP_023164729.1|2543968_2544289_+	sigma-70 family RNA polymerase sigma factor	NA	Q9AZD9	Lactococcus_phage	96.2	3.5e-50
WP_003131244.1|2545072_2546083_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
2544966:2544985	attR	ATTCACTTGAACAATGAATA	NA	NA	NA	NA
WP_017865257.1|2546158_2546353_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003131246.1|2546362_2546884_-	DUF536 domain-containing protein	NA	NA	NA	NA	NA
WP_023164730.1|2547011_2549705_+	cation-translocating P-type ATPase	NA	M1HLC0	Paramecium_bursaria_Chlorella_virus	27.5	3.6e-71
>prophage 1
NZ_CP029293	Lactococcus lactis subsp. lactis KLDS 4.0325 plasmid unnamed6	109112	2409	89513	109112	transposase,protease	Streptococcus_phage(20.83%)	62	NA	NA
WP_080653232.1|2409_3018_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_080653231.1|3178_3769_-	DUF805 domain-containing protein	NA	NA	NA	NA	NA
WP_014011544.1|4673_5816_+	cation:proton antiporter	NA	NA	NA	NA	NA
WP_003129676.1|5832_7170_+	potassium transporter TrkH	NA	NA	NA	NA	NA
WP_003129675.1|7189_7858_+	TrkA family potassium uptake protein	NA	NA	NA	NA	NA
WP_032941466.1|7946_8447_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003129673.1|8833_9058_-	hypothetical protein	NA	NA	NA	NA	NA
WP_109009842.1|9059_9869_-	ParA family protein	NA	A0A1V0DZZ0	Clostridioides_phage	26.8	1.8e-18
WP_003129670.1|10014_11169_-	RepB family plasmid replication initiator protein	NA	A0A1V0E006	Clostridioides_phage	27.3	1.1e-05
WP_109009844.1|11487_12327_-|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_011669112.1|12604_13621_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.9	3.4e-14
WP_010906164.1|13617_14577_+	ABC transporter ATP-binding protein	NA	F2Y302	Organic_Lake_phycodnavirus	24.7	7.7e-08
WP_010906163.1|14557_15517_+	peptide ABC transporter permease	NA	NA	NA	NA	NA
WP_003140250.1|15526_16411_+	peptide ABC transporter permease	NA	NA	NA	NA	NA
WP_003132842.1|20575_20872_+	hypothetical protein	NA	A0A1S5SEW3	Streptococcus_phage	39.3	4.2e-05
WP_003132844.1|20906_21128_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003132846.1|21477_22032_-	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	50.6	3.6e-42
WP_011834667.1|22266_23463_-	amidohydrolase	NA	NA	NA	NA	NA
WP_109009846.1|23735_25262_-	chitinase	NA	Q9WAX4	Chlorella_virus	32.1	1.4e-19
WP_109009848.1|25318_27580_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_109009850.1|28265_29165_-	peptidylprolyl isomerase	NA	NA	NA	NA	NA
WP_109009852.1|29536_35425_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_109009854.1|36510_37704_-	glycosyltransferase	NA	M1HN86	Paramecium_bursaria_Chlorella_virus	31.6	4.0e-46
WP_002334574.1|37740_38928_-	nucleotide sugar dehydrogenase	NA	M1HV26	Paramecium_bursaria_Chlorella_virus	48.8	6.5e-97
WP_109009856.1|39110_39326_-	hypothetical protein	NA	NA	NA	NA	NA
WP_109009919.1|39783_40095_-	hypothetical protein	NA	NA	NA	NA	NA
WP_109009858.1|40568_41250_+|transposase	IS6 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	83.2	1.0e-107
WP_109009921.1|42230_43481_-	MFS transporter	NA	NA	NA	NA	NA
WP_025017229.1|43587_44334_-	heme-dependent peroxidase	NA	NA	NA	NA	NA
WP_109009860.1|44566_45940_-	MFS transporter	NA	NA	NA	NA	NA
WP_109009862.1|45979_47509_-	copper oxidase	NA	NA	NA	NA	NA
WP_109009864.1|47603_48284_-|transposase	IS6 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	83.2	3.6e-108
WP_003137511.1|50947_51208_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_021214655.1|51300_51882_+	recombinase family protein	NA	A0A1J1J8Z4	Escherichia_phage	45.1	8.5e-34
WP_109009866.1|52007_52109_-	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA	NA
WP_021214652.1|52379_53147_-	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA	NA
WP_003131727.1|53623_54049_+	galactose-6-phosphate isomerase subunit LacA	NA	NA	NA	NA	NA
WP_021214651.1|54065_54581_+	galactose-6-phosphate isomerase subunit LacB	NA	A0A222YX14	Synechococcus_phage	36.0	4.3e-05
WP_002290553.1|54591_55524_+	tagatose-6-phosphate kinase	NA	NA	NA	NA	NA
WP_003131732.1|55526_56507_+	tagatose-bisphosphate aldolase	NA	NA	NA	NA	NA
WP_014011534.1|56534_56852_+	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA	NA
WP_021214650.1|56855_58562_+	PTS lactose transporter subunit IIBC	NA	NA	NA	NA	NA
WP_109009868.1|58666_60073_+	6-phospho-beta-galactosidase	NA	A0A0B5JD41	Pandoravirus	29.2	2.3e-45
WP_021214647.1|60364_61264_+	aldose 1-epimerase family protein	NA	NA	NA	NA	NA
WP_025017224.1|61514_61889_+	large-conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_015081734.1|64644_65475_+	AAC(3) family N-acetyltransferase	NA	O64018	Bacillus_phage	39.8	6.2e-46
WP_081213844.1|67973_68255_+	hypothetical protein	NA	NA	NA	NA	NA
WP_050490645.1|68260_68638_+	hypothetical protein	NA	NA	NA	NA	NA
WP_109009869.1|68753_69026_-	hypothetical protein	NA	NA	NA	NA	NA
WP_109009871.1|69039_70197_-	RepB family plasmid replication initiator protein	NA	A0A1V0E006	Clostridioides_phage	26.1	4.3e-05
WP_109009873.1|71280_71640_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023349191.1|71706_72597_+|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
WP_032398646.1|72866_73505_+	hypothetical protein	NA	NA	NA	NA	NA
WP_109009875.1|73645_75112_+	Y-family DNA polymerase	NA	M1Q231	Streptococcus_phage	50.9	8.4e-131
WP_109009877.1|75108_75501_+	hypothetical protein	NA	A0A182BQ76	Lactococcus_phage	60.0	1.3e-06
WP_109009879.1|75515_76541_+	recombinase RecA	NA	A0A2D1GPX2	Mycobacterium_phage	42.7	2.4e-71
WP_109009881.1|77929_78811_+	hypothetical protein	NA	NA	NA	NA	NA
WP_109009883.1|79010_79607_-	recombinase family protein	NA	A0A1J1J8Z4	Escherichia_phage	44.0	8.7e-34
WP_109009885.1|79763_79997_+	hypothetical protein	NA	A0A1X9I6C6	Streptococcus_phage	90.0	7.8e-07
WP_003331414.1|81655_82414_-	ATPase AAA	NA	A0A059NT77	Lactococcus_phage	100.0	5.3e-137
WP_003331415.1|82425_83649_-|transposase	IS21-like element IS712 family transposase	transposase	A0A059NT83	Lactococcus_phage	100.0	4.9e-233
WP_109009887.1|86063_89513_+	type II restriction endonuclease	NA	A0A2R2ZGH5	Clostridioides_phage	24.2	3.5e-26
