assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000447675.1_ASM44767v1	NC_022097	Treponema pedis str. T A4, complete sequence	1	745578-750495	1,1,1,2,3	CRISPRCasFinder,CRT,PILER-CR,PILER-CR,PILER-CR	no	WYL,cas2,cas1,cas9	WYL,cas2,cas1,cas9,DinG,DEDDh,cas3,csa3	Type II-B,,Type II-A,Type II-C	GTTGTGATTTGATTTCTTTTTAAAAAGTGATATAAT,GTTGTGATTTGATTTCTTTTTAAAAAGTGATATAAT,TTATTAGTTGTGATTTGATTTCTTTTTAAAAAGTGATATAATT,GTTGTGATTTGATTTCTTTTTAAAAAGTGATATAAT,GTTGTGATTTGATTTCTTTTTAAAAAGTGATATAAT	36,36,43,36,36	2	2	746802-746831|750035-750063	NC_022097.1_838478-838449|NC_022097.1_893717-893689	NA:NA:NA:NA:NA	74,74,61,61,61	74	TypeII-C,,TypeII-B,TypeII-A	WYL,cas2,cas1,cas9,DinG,DEDDh,cas3,csa3	NA|220aa|up_7|NC_022097.1_738144_738804_-,NA|271aa|up_1|NC_022097.1_743715_744528_+,NA|125aa|down_3|NC_022097.1_756275_756650_+,NA|66aa|down_5|NC_022097.1_757369_757567_-	NA|444aa|up_9|NC_022097.1_735480_736812_-	pfam09028, Mac-1, Mac 1	NA|391aa|up_8|NC_022097.1_736953_738126_-	cd03886, M20_Acy1, M20 Peptidase Aminoacylase 1 family	NA|220aa|up_7|NC_022097.1_738144_738804_-	NA	NA|245aa|up_6|NC_022097.1_738820_739555_-	pfam16481, DUF5058, Domain of unknown function (DUF5058)	NA|262aa|up_5|NC_022097.1_739903_740689_-	COG4587, COG4587, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|341aa|up_4|NC_022097.1_740729_741752_-	COG4586, COG4586, ABC-type uncharacterized transport system, ATPase component [General function prediction only]	NA|263aa|up_3|NC_022097.1_741732_742521_-	COG3694, COG3694, ABC-type uncharacterized transport system, permease component [General function prediction only]	WYL|312aa|up_2|NC_022097.1_742548_743484_-	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	NA|271aa|up_1|NC_022097.1_743715_744528_+	NA	NA|176aa|up_0|NC_022097.1_744592_745120_-	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	cas2|113aa|down_0|NC_022097.1_750593_750932_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|296aa|down_1|NC_022097.1_750934_751822_-	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas9|1263aa|down_2|NC_022097.1_751854_755643_-	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	NA|125aa|down_3|NC_022097.1_756275_756650_+	NA	NA|225aa|down_4|NC_022097.1_756666_757341_+	pfam10895, DUF2715, Domain of unknown function (DUF2715)	NA|66aa|down_5|NC_022097.1_757369_757567_-	NA	NA|583aa|down_6|NC_022097.1_757568_759317_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|592aa|down_7|NC_022097.1_759301_761077_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|196aa|down_8|NC_022097.1_761132_761720_-	pfam09605, Trep_Strep, Hypothetical bacterial integral membrane protein (Trep_Strep)	NA|507aa|down_9|NC_022097.1_761751_763272_-	cd03226, ABC_cobalt_CbiO_domain2, Second domain of the ATP-binding cassette component of cobalt transport system
GCF_000447675.1_ASM44767v1	NC_022097	Treponema pedis str. T A4, complete sequence	2	1380640-1380731	2	CRISPRCasFinder	no		WYL,cas2,cas1,cas9,DinG,DEDDh,cas3,csa3	Orphan	GTAAAACTGCCTGCAAGCCTTAC	23	0	0	NA	NA	NA	1	1	Orphan	WYL,cas2,cas1,cas9,DinG,DEDDh,cas3,csa3	NA|62aa|up_7|NC_022097.1_1368710_1368896_-,NA|370aa|up_5|NC_022097.1_1370910_1372020_+,NA|216aa|up_2|NC_022097.1_1373552_1374200_+,NA|100aa|down_0|NC_022097.1_1381431_1381731_-,NA|189aa|down_1|NC_022097.1_1381752_1382319_-,NA|152aa|down_2|NC_022097.1_1382957_1383413_-,NA|93aa|down_3|NC_022097.1_1383490_1383769_-,NA|197aa|down_4|NC_022097.1_1383777_1384368_-,NA|88aa|down_7|NC_022097.1_1387762_1388026_+	NA|152aa|up_9|NC_022097.1_1367085_1367541_-	pfam09406, DUF2004, Protein of unknown function (DUF2004)	NA|222aa|up_8|NC_022097.1_1367613_1368279_-	pfam14094, DUF4272, Domain of unknown function (DUF4272)	NA|62aa|up_7|NC_022097.1_1368710_1368896_-	NA	NA|494aa|up_6|NC_022097.1_1369436_1370918_+	pfam01555, N6_N4_Mtase, DNA methylase	NA|370aa|up_5|NC_022097.1_1370910_1372020_+	NA	NA|103aa|up_4|NC_022097.1_1372920_1373229_+	COG1669, COG1669, Predicted nucleotidyltransferases [General function prediction only]	NA|117aa|up_3|NC_022097.1_1373212_1373563_+	COG2361, COG2361, Uncharacterized conserved protein [Function unknown]	NA|216aa|up_2|NC_022097.1_1373552_1374200_+	NA	NA|856aa|up_1|NC_022097.1_1374940_1377508_+	cd18808, SF1_C_Upf1, C-terminal helicase domain of Upf1-like family helicases	NA|236aa|up_0|NC_022097.1_1379158_1379866_+	pfam14848, HU-DNA_bdg, DNA-binding domain	NA|100aa|down_0|NC_022097.1_1381431_1381731_-	NA	NA|189aa|down_1|NC_022097.1_1381752_1382319_-	NA	NA|152aa|down_2|NC_022097.1_1382957_1383413_-	NA	NA|93aa|down_3|NC_022097.1_1383490_1383769_-	NA	NA|197aa|down_4|NC_022097.1_1383777_1384368_-	NA	NA|400aa|down_5|NC_022097.1_1385458_1386658_+	COG0535, COG0535, Predicted Fe-S oxidoreductases [General function prediction only]	NA|330aa|down_6|NC_022097.1_1386753_1387743_+	COG0641, AslB, Arylsulfatase regulator (Fe-S oxidoreductase) [General function prediction only]	NA|88aa|down_7|NC_022097.1_1387762_1388026_+	NA	NA|449aa|down_8|NC_022097.1_1388043_1389390_+	COG0535, COG0535, Predicted Fe-S oxidoreductases [General function prediction only]	NA|363aa|down_9|NC_022097.1_1389448_1390537_+	cd06174, MFS, Major Facilitator Superfamily
