The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_021282	Mycobacteroides abscessus subsp. bolletii 50594, complete sequence	5000473	801539	817068	5000473	terminase,protease	Mycobacterium_phage(86.67%)	19	NA	NA
WP_016341847.1|801539_805232_-	hypothetical protein	NA	Q854Y3	Mycobacterium_virus	40.1	1.8e-193
WP_016341848.1|805246_805558_-	hypothetical protein	NA	A0A2P1JR40	Mycobacterium_phage	62.8	7.2e-24
WP_016341849.1|805670_806132_-	hypothetical protein	NA	A0A0A7RVK9	Mycobacterium_phage	42.1	1.8e-26
WP_016341850.1|806231_807311_-	hypothetical protein	NA	A0A2H4PED2	Mycobacterium_phage	46.1	9.5e-63
WP_016341851.1|807408_807819_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016341852.1|807818_808178_-	HK97 gp10 family phage protein	NA	NA	NA	NA	NA
WP_016341853.1|808177_808585_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016341854.1|808584_808947_-	hypothetical protein	NA	A0A218M9J6	Mycobacterium_phage	57.5	1.6e-30
WP_016341855.1|808951_809401_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016341856.1|809400_810312_-	hypothetical protein	NA	A0A2K9VEV5	Mycobacterium_phage	80.7	3.4e-138
WP_005070916.1|810328_810706_-	hypothetical protein	NA	W8EH90	Mycobacterium_phage	82.4	6.2e-46
WP_016341857.1|810709_811963_-|protease	Clp protease	protease	A0A1B3AZ47	Gordonia_phage	51.3	1.9e-86
WP_016341858.1|811956_813405_-	hypothetical protein	NA	A0A249XTF7	Mycobacterium_phage	66.0	6.3e-171
WP_041927552.1|813419_814832_-|terminase	terminase	terminase	R4TCB6	Mycobacterium_phage	56.8	1.9e-151
WP_016341860.1|814980_815382_-	hypothetical protein	NA	A0A023ZWK1	Mycobacterium_phage	34.0	1.0e-06
WP_016341861.1|815542_815995_-	AAA family ATPase	NA	A0A1D8EX78	Mycobacterium_phage	66.7	1.3e-53
WP_057138219.1|815991_816255_-	hypothetical protein	NA	A0A1D8EX45	Mycobacterium_phage	71.3	3.7e-29
WP_016341863.1|816361_816760_-	hypothetical protein	NA	A0A088F7V7	Mycobacterium_phage	53.3	3.2e-16
WP_041927847.1|816756_817068_-	hypothetical protein	NA	A0A2H4PD32	Mycobacterium_phage	62.1	1.1e-29
>prophage 2
NC_021282	Mycobacteroides abscessus subsp. bolletii 50594, complete sequence	5000473	824452	834376	5000473		Mycobacterium_phage(72.73%)	15	NA	NA
WP_041927565.1|824452_825364_-	hypothetical protein	NA	A0A1B3B1T0	Gordonia_phage	62.6	1.3e-41
WP_016341873.1|825443_825812_-	hypothetical protein	NA	G8I4T1	Mycobacterium_phage	81.0	2.0e-52
WP_051223575.1|825811_826141_-	hypothetical protein	NA	Q853R9	Mycobacterium_phage	46.6	2.3e-20
WP_016341876.1|826526_827546_-	site-specific DNA-methyltransferase	NA	A0A166YCK5	Gordonia_phage	61.5	3.6e-120
WP_016341877.1|827542_828079_-	hypothetical protein	NA	A0A142F2K5	Mycobacterium_phage	56.6	5.2e-46
WP_016341878.1|828075_828492_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016341879.1|828488_829019_-	hypothetical protein	NA	A0A1D8ERW9	Mycobacterium_phage	51.4	1.4e-38
WP_016341880.1|829046_829883_-	DUF2303 family protein	NA	G8I4S3	Mycobacterium_phage	65.8	3.5e-105
WP_005123095.1|829910_830252_-	hypothetical protein	NA	G8I4S2	Mycobacterium_phage	68.1	1.5e-35
WP_016341881.1|830254_831376_-	hypothetical protein	NA	A0A2P1CGD3	Mycobacterium_phage	69.3	7.2e-98
WP_016341882.1|831372_832266_-	recE	NA	A0A2D1G8R5	Mycobacterium_phage	50.3	1.1e-77
WP_016341883.1|832465_832753_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016341884.1|832752_833073_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016341885.1|833069_833456_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016341886.1|833560_834376_-	phage antirepressor KilAC domain-containing protein	NA	A0A159B6D6	Gordonia_phage	45.0	6.3e-51
>prophage 3
NC_021282	Mycobacteroides abscessus subsp. bolletii 50594, complete sequence	5000473	1573439	1654260	5000473	tail,transposase,portal,capsid,integrase	Mycobacterium_phage(66.67%)	91	1573263:1573307	1644763:1644807
1573263:1573307	attL	GTGCGCCGTCAGGGGCTCGAACCCCGGACCCGCTGATTAAGAGTC	NA	NA	NA	NA
WP_016342200.1|1573439_1574708_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A059VKS6	Mycobacterium_phage	53.7	4.4e-120
WP_016342201.1|1574704_1575340_-	DUF732 domain-containing protein	NA	NA	NA	NA	NA
WP_016342203.1|1575775_1576009_-	DUF3263 domain-containing protein	NA	A0A0A7RXU7	Mycobacterium_phage	60.3	3.3e-13
WP_016342204.1|1576005_1576428_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A2P1A0T3	Gordonia_phage	54.4	2.5e-35
WP_050597077.1|1576537_1577158_+	NYN domain-containing protein	NA	NA	NA	NA	NA
WP_005122201.1|1579636_1579876_+	helix-turn-helix transcriptional regulator	NA	A0A0A7RVM8	Mycobacterium_phage	71.2	2.7e-18
WP_005122202.1|1579875_1580763_+	hypothetical protein	NA	NA	NA	NA	NA
WP_032668141.1|1580908_1581631_+	hypothetical protein	NA	G8I4X5	Mycobacterium_virus	40.6	1.6e-45
WP_016342208.1|1581632_1581932_+	hypothetical protein	NA	A0A088F7N3	Mycobacterium_phage	66.0	1.9e-29
WP_005122206.1|1581928_1582114_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016342209.1|1582211_1582520_+	DUF732 domain-containing protein	NA	NA	NA	NA	NA
WP_041927615.1|1582516_1582765_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016342210.1|1583729_1584854_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016342212.1|1585137_1585449_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016342213.1|1585445_1586084_+	ERF family protein	NA	A0A1B0XTM7	Freshwater_phage	65.0	3.1e-45
WP_079276843.1|1586118_1586436_+	hypothetical protein	NA	A0A2H4JBJ1	uncultured_Caudovirales_phage	41.0	3.9e-09
WP_041927617.1|1586423_1587107_+	hypothetical protein	NA	G1D0U2	Mycobacterium_virus	33.5	1.1e-19
WP_158022851.1|1590496_1590658_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041927619.1|1590805_1591069_+	hypothetical protein	NA	A0A2D1G9M8	Mycobacterium_phage	40.0	5.5e-09
WP_158022853.1|1591065_1591239_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016342219.1|1591235_1591457_+	hypothetical protein	NA	A0A068F4K6	Mycobacterium_phage	51.3	6.5e-11
WP_158022855.1|1591725_1591941_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016342221.1|1592121_1592439_+	WhiB family transcriptional regulator	NA	A0A2P1JRB7	Mycobacterium_phage	44.2	4.2e-11
WP_016342222.1|1592438_1592726_+	WhiB family transcriptional regulator	NA	A0A2P1JRB7	Mycobacterium_phage	37.8	1.1e-10
WP_016342223.1|1592764_1593007_+	hypothetical protein	NA	G1D3X4	Mycobacterium_virus	53.1	1.8e-09
WP_158022857.1|1593003_1593294_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016342225.1|1593615_1594053_+	DUF4326 domain-containing protein	NA	A0A142KC74	Gordonia_phage	46.7	9.8e-27
WP_016342226.1|1594049_1594712_+	hypothetical protein	NA	A0A2L0HK00	Mycobacterium_phage	46.2	1.1e-48
WP_016342228.1|1594989_1595349_-	type II toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA	NA
WP_016342229.1|1595345_1595609_-	HicA family toxin-antitoxin system toxin component	NA	A0A2P1A0R7	Gordonia_phage	56.8	9.8e-06
WP_016342230.1|1595821_1596313_+	HNH endonuclease	NA	A0A0N9ESC4	Pseudomonas_phage	47.5	5.0e-19
WP_158022859.1|1596956_1598227_-|transposase	IS3 family transposase	transposase	A0A160DCU2	Gordonia_phage	40.4	1.8e-52
WP_016342235.1|1598351_1598681_+	hypothetical protein	NA	A0A088FQ47	Mycobacterium_phage	44.4	2.2e-15
WP_016342236.1|1598718_1599063_+	hypothetical protein	NA	NA	NA	NA	NA
WP_051223592.1|1599101_1599344_+	hypothetical protein	NA	A0A068F4K6	Mycobacterium_phage	40.3	2.0e-05
WP_016342238.1|1599557_1599842_+	hypothetical protein	NA	A0A059VG69	Mycobacterium_phage	68.2	3.7e-27
WP_041927897.1|1600373_1600655_-	DUF732 domain-containing protein	NA	NA	NA	NA	NA
WP_016342240.1|1600784_1602047_+	glycosyltransferase	NA	G8I6V8	Mycobacterium_virus	72.6	4.2e-70
WP_016342241.1|1602053_1602878_+	hypothetical protein	NA	S5VVU3	Mycobacterium_phage	54.3	7.4e-76
WP_016342242.1|1604238_1604934_+	hypothetical protein	NA	A0A0A1ENE4	Mycobacterium_phage	71.7	1.3e-89
WP_041927625.1|1604933_1605179_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005110295.1|1605178_1605595_+	hypothetical protein	NA	A0A068F2M6	Mycobacterium_phage	50.4	6.3e-23
WP_158022859.1|1605773_1607043_+|transposase	IS3 family transposase	transposase	A0A160DCU2	Gordonia_phage	40.4	1.8e-52
WP_079276779.1|1607030_1607978_+|portal	phage portal protein	portal	Q9ZX72	Mycobacterium_phage	68.2	1.1e-102
WP_158022859.1|1608076_1609347_-|transposase	IS3 family transposase	transposase	A0A160DCU2	Gordonia_phage	40.4	1.8e-52
WP_016342244.1|1609667_1610093_+	hypothetical protein	NA	A0A076G833	Mycobacterium_phage	68.5	1.2e-50
WP_016342245.1|1610070_1611852_+	hypothetical protein	NA	A0A076GDP6	Mycobacterium_phage	77.2	1.6e-280
WP_158022859.1|1612393_1613663_+|transposase	IS3 family transposase	transposase	A0A160DCU2	Gordonia_phage	40.4	1.8e-52
WP_041927627.1|1614205_1614520_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158022859.1|1614638_1615909_-|transposase	IS3 family transposase	transposase	A0A160DCU2	Gordonia_phage	40.4	1.8e-52
WP_041927628.1|1615973_1616504_+	DUF4355 domain-containing protein	NA	A0A2R4AQA8	Mycobacterium_phage	47.4	3.7e-28
WP_016342250.1|1616560_1617469_+|capsid	phage major capsid protein	capsid	A0A221J736	Mycobacterium_phage	76.9	4.4e-122
WP_041927629.1|1617961_1618189_+	hypothetical protein	NA	G8I4C3	Mycobacterium_phage	50.0	7.4e-10
WP_016342252.1|1618188_1618455_+	hypothetical protein	NA	A0A068F3C1	Mycobacterium_phage	51.2	6.8e-15
WP_016342253.1|1618454_1618832_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005067417.1|1618898_1619486_+	hypothetical protein	NA	A0A068F8K4	Mycobacterium_phage	67.2	1.6e-69
WP_016342254.1|1619580_1619847_+	hypothetical protein	NA	A0A068F4G7	Mycobacterium_phage	44.7	2.9e-13
WP_005067420.1|1619963_1620275_+	hypothetical protein	NA	A0A068F4G7	Mycobacterium_phage	43.7	4.0e-14
WP_016342255.1|1620285_1624284_+|tail	phage tail tape measure protein	tail	A0A068F1L4	Mycobacterium_phage	59.9	1.2e-293
WP_016342256.1|1624283_1625387_+	hypothetical protein	NA	A0A068F3C3	Mycobacterium_phage	67.9	3.5e-153
WP_016342257.1|1625389_1627186_+	hypothetical protein	NA	A0A068F4H3	Mycobacterium_phage	62.5	5.9e-235
WP_041927901.1|1627281_1627719_+	hypothetical protein	NA	A0A068F2D2	Mycobacterium_phage	51.8	7.5e-35
WP_005110315.1|1627711_1628797_+|tail	tail protein	tail	A0A068F8L3	Mycobacterium_phage	67.8	1.4e-151
WP_016342260.1|1631237_1631438_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016342261.1|1631438_1632593_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016342262.1|1632608_1632992_+	hypothetical protein	NA	A0A222ZQF4	Mycobacterium_phage	68.5	1.6e-41
WP_157929202.1|1632988_1633126_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016342264.1|1633125_1634571_+	chitinase	NA	A0A249XQG4	Mycobacterium_phage	62.1	9.1e-162
WP_016342265.1|1634573_1635014_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041927903.1|1635064_1635979_+	hypothetical protein	NA	A0A2P1CCW0	Mycobacterium_phage	43.3	1.2e-55
WP_041927904.1|1636313_1637441_+	hypothetical protein	NA	S5W0N6	Mycobacterium_phage	57.6	1.7e-118
WP_016342268.1|1637437_1638085_+	HNH endonuclease	NA	A0A076YKH2	Mycobacterium_phage	60.0	6.6e-19
WP_016342270.1|1638315_1638636_-	hypothetical protein	NA	R4TBK1	Mycobacterium_phage	41.5	6.5e-12
WP_079276780.1|1638816_1639008_+	hypothetical protein	NA	A0A222ZRJ5	Mycobacterium_phage	61.5	1.6e-05
WP_041927470.1|1639081_1640317_+|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	44.6	1.2e-82
WP_016342272.1|1640556_1640934_+	DUF2746 domain-containing protein	NA	NA	NA	NA	NA
WP_016342273.1|1640972_1641278_+	hypothetical protein	NA	A0A1D8EQ56	Mycobacterium_phage	43.4	3.8e-09
WP_016342274.1|1641316_1641643_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041927630.1|1641730_1642102_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_016342275.1|1642102_1642621_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041927906.1|1642617_1644081_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016342277.1|1644108_1644432_-	WXG100 family type VII secretion target	NA	NA	NA	NA	NA
WP_041927631.1|1644421_1644697_-	WXG100 family type VII secretion target	NA	NA	NA	NA	NA
WP_005060026.1|1644993_1646214_+	L,D-transpeptidase family protein	NA	NA	NA	NA	NA
1644763:1644807	attR	GTGCGCCGTCAGGGGCTCGAACCCCGGACCCGCTGATTAAGAGTC	NA	NA	NA	NA
WP_016342278.1|1646283_1647171_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005099075.1|1647817_1648558_-	oligoribonuclease	NA	M4M9I5	Vibrio_phage	39.0	2.3e-23
WP_005099072.1|1648571_1650098_+	DUF853 family protein	NA	A0A248XCZ8	Klebsiella_phage	37.7	3.6e-60
WP_016342279.1|1650136_1651087_-	diiron oxygenase	NA	NA	NA	NA	NA
WP_025982906.1|1651213_1651891_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005060038.1|1651869_1652673_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_041927470.1|1653024_1654260_-|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	44.6	1.2e-82
>prophage 4
NC_021282	Mycobacteroides abscessus subsp. bolletii 50594, complete sequence	5000473	2869338	2877865	5000473		Streptococcus_phage(16.67%)	7	NA	NA
WP_005057568.1|2869338_2870010_-	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	31.1	4.9e-17
WP_005057567.1|2870123_2871047_+	peptidylprolyl isomerase	NA	A0A1V0SCU1	Indivirus	31.6	1.1e-08
WP_016342804.1|2871048_2871918_+	class A beta-lactamase	NA	A0A077SL40	Escherichia_phage	38.7	5.7e-42
WP_005057565.1|2872008_2874375_-	RelA/SpoT family protein	NA	A0A291L9W9	Bordetella_phage	38.4	1.8e-13
WP_016342805.1|2874405_2874939_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	36.4	1.1e-14
WP_016342806.1|2874935_2876612_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025982461.1|2876611_2877865_-	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	28.6	1.5e-22
>prophage 5
NC_021282	Mycobacteroides abscessus subsp. bolletii 50594, complete sequence	5000473	3392845	3402188	5000473	transposase	Bacillus_phage(33.33%)	8	NA	NA
WP_162098388.1|3392845_3395014_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	V9VI16	Lactococcus_phage	51.5	1.5e-208
WP_016343037.1|3394980_3395451_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A217ER62	Bacillus_phage	30.3	1.5e-09
WP_005056596.1|3395479_3395722_-	redoxin NrdH	NA	V5UN81	Mycobacterium_phage	67.5	1.8e-22
WP_041927470.1|3397557_3398793_-|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	44.6	1.2e-82
WP_016891234.1|3399183_3399732_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_005103245.1|3399848_3400463_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005056589.1|3400485_3401307_+	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	55.2	2.9e-80
WP_016343040.1|3401303_3402188_-	SDR family oxidoreductase	NA	W8CYX9	Bacillus_phage	35.1	2.3e-06
>prophage 6
NC_021282	Mycobacteroides abscessus subsp. bolletii 50594, complete sequence	5000473	3450419	3480450	5000473	portal	Mycobacterium_phage(59.26%)	40	NA	NA
WP_016343089.1|3450419_3452093_+	bifunctional DNA primase/polymerase	NA	S5Y832	Mycobacterium_phage	44.0	5.4e-81
WP_016343090.1|3452356_3452848_+	recombination endonuclease VII	NA	A0A220NQC3	Rhodococcus_phage	55.9	7.9e-33
WP_016343091.1|3452844_3453351_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016343092.1|3453347_3453761_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005094086.1|3453762_3454440_+	hypothetical protein	NA	G9FH23	Rhodococcus_phage	38.8	5.1e-22
WP_005100616.1|3454567_3454804_+	hypothetical protein	NA	G9FH24	Rhodococcus_phage	57.1	2.3e-14
WP_016343093.1|3454800_3454941_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016343094.1|3454946_3455135_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016343095.1|3455131_3455410_+	HNH endonuclease	NA	A0A1D8EQ93	Mycobacterium_phage	58.0	2.7e-22
WP_131809300.1|3455406_3455601_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016343096.1|3455771_3456023_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016343097.1|3456030_3457878_+	hypothetical protein	NA	A0A1I9SBW6	Mycobacterium_phage	53.3	5.1e-141
WP_016343098.1|3457878_3459357_+|portal	phage portal protein	portal	A0A2P1A0M6	Gordonia_phage	51.9	1.6e-132
WP_016343099.1|3459337_3460243_+	hypothetical protein	NA	A0A088FUW7	Mycobacterium_phage	54.2	1.2e-79
WP_005100030.1|3460388_3460946_+	hypothetical protein	NA	A0A166XYP9	Gordonia_phage	38.7	1.1e-17
WP_016343100.1|3460990_3461365_+	hypothetical protein	NA	A0A2P1A0L4	Gordonia_phage	72.4	2.4e-45
WP_016343101.1|3461379_3462417_+	hypothetical protein	NA	A0A166XYQ6	Gordonia_phage	63.9	1.1e-121
WP_016343102.1|3462416_3462719_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158022870.1|3462660_3463077_+	DUF1320 family protein	NA	A0A166XYS3	Gordonia_phage	46.2	1.4e-22
WP_016343104.1|3463073_3463421_+	hypothetical protein	NA	A0A142KAW9	Gordonia_phage	38.7	3.2e-12
WP_005101360.1|3463417_3463714_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016343105.1|3463710_3464118_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016343106.1|3464176_3464854_+	hypothetical protein	NA	S5YN28	Mycobacterium_phage	45.1	2.9e-41
WP_016343107.1|3465052_3465508_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005098361.1|3465612_3465942_+	hypothetical protein	NA	S5Z5T8	Mycobacterium_phage	56.7	1.3e-15
WP_016343108.1|3465946_3469285_+	hypothetical protein	NA	A0A068F1L4	Mycobacterium_phage	44.1	3.7e-73
WP_005102507.1|3469281_3470511_+	hypothetical protein	NA	M4W8F3	Mycobacterium_phage	38.3	2.9e-68
WP_079276868.1|3470568_3472233_+	hypothetical protein	NA	S5XYP0	Mycobacterium_phage	55.8	2.2e-183
WP_005102329.1|3472232_3472718_+	hypothetical protein	NA	Q9ZX57	Mycobacterium_phage	36.8	9.6e-15
WP_005094140.1|3472714_3473824_+	hypothetical protein	NA	A0A068F8L3	Mycobacterium_phage	48.8	2.6e-92
WP_016343110.1|3473823_3475212_+	hypothetical protein	NA	I6X329	Mycobacteriophage	34.2	2.3e-13
WP_041927975.1|3475217_3475559_+	hypothetical protein	NA	A0A2K9VEW7	Mycobacterium_phage	58.9	2.4e-28
WP_016343112.1|3475555_3475936_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016343113.1|3475928_3476225_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016343114.1|3476241_3476877_+	collagen-like protein	NA	G9FHZ1	Nocardia_phage	65.5	8.1e-14
WP_005100057.1|3476910_3477219_+	hypothetical protein	NA	A0A2P1JT61	Mycobacterium_phage	63.4	4.8e-20
WP_016343115.1|3477219_3477882_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016343116.1|3477899_3478145_+	hypothetical protein	NA	G1JWF1	Mycobacterium_phage	34.4	1.2e-05
WP_041927977.1|3478669_3479443_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A1U9WRQ3	Mycobacterium_phage	71.7	3.2e-105
WP_005099947.1|3479445_3480450_+	hypothetical protein	NA	A0A2P1JR68	Mycobacterium_phage	54.6	2.4e-105
>prophage 7
NC_021282	Mycobacteroides abscessus subsp. bolletii 50594, complete sequence	5000473	4916788	4925468	5000473		Mycobacterium_phage(33.33%)	8	NA	NA
WP_041927778.1|4916788_4918261_+	serine hydrolase	NA	A0A1J0GRK9	Mycobacterium_phage	28.5	3.6e-12
WP_005082750.1|4918388_4919201_+	DUF1906 domain-containing protein	NA	A0A2D1GEF2	Gordonia_phage	49.1	3.1e-50
WP_016343748.1|4919249_4920752_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A1W6JL93	Lactococcus_phage	47.3	3.3e-05
WP_005064639.1|4921180_4922029_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A2D1GEV9	Mycobacterium_phage	56.1	2.9e-67
WP_016343749.1|4922195_4922498_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_016343750.1|4922789_4923239_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005072025.1|4923259_4924711_+	HAMP domain-containing histidine kinase	NA	Q8QKV4	Ectocarpus_siliculosus_virus	33.6	2.9e-06
WP_005064635.1|4924790_4925468_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	31.4	4.4e-26
>prophage 1
NC_021278	Mycobacteroides abscessus subsp. bolletii 50594 plasmid 1, complete sequence	172814	2318	64900	172814	transposase,integrase	Enterobacteria_phage(15.38%)	48	26206:26222	31792:31808
WP_016343783.1|2318_3521_+|integrase	tyrosine-type recombinase/integrase	integrase	A8ATM2	Listeria_phage	24.4	2.7e-10
WP_079276886.1|3540_5745_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_016343785.1|5741_6149_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158022859.1|6278_7549_-|transposase	IS3 family transposase	transposase	Q6H9S6	Enterobacteria_phage	44.4	2.5e-54
WP_016343787.1|7723_8563_-	adenine-specific DNA methyltransferase	NA	A0A076YNT4	Mesorhizobium_phage	65.4	1.2e-68
WP_158022920.1|8737_10561_+	AAA domain-containing protein	NA	K4I1H4	Acidithiobacillus_phage	31.2	1.1e-13
WP_041928115.1|10770_11922_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162145472.1|12006_12492_-	hypothetical protein	NA	NA	NA	NA	NA
WP_051223683.1|13884_14160_-	hypothetical protein	NA	G8I4U6	Mycobacterium_phage	42.4	1.3e-05
WP_016343794.1|14888_15368_-	hypothetical protein	NA	NA	NA	NA	NA
WP_036438668.1|15939_17877_-	Rieske 2Fe-2S domain-containing protein	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	25.4	1.5e-29
WP_016343796.1|17879_18893_-	DUF4331 family protein	NA	NA	NA	NA	NA
WP_016343797.1|19067_19700_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_016343798.1|19980_20697_+	flavodoxin family protein	NA	NA	NA	NA	NA
WP_016343799.1|21368_22571_+	Na+/H+ antiporter-like protein	NA	NA	NA	NA	NA
WP_016343800.1|23330_23738_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_158022925.1|23869_24043_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016343801.1|24900_25299_-	hypothetical protein	NA	NA	NA	NA	NA
WP_051223711.1|25291_26551_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
26206:26222	attL	CCGGCAGCAGTTCGCCG	NA	NA	NA	NA
WP_016343803.1|27443_29276_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041928199.1|29272_30091_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_016343806.1|32488_32698_+	hypothetical protein	NA	NA	NA	NA	NA
31792:31808	attR	CCGGCAGCAGTTCGCCG	NA	NA	NA	NA
WP_158022927.1|32966_33995_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016343807.1|34328_34877_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016343808.1|35005_35302_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016343809.1|35282_35525_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_016343810.1|35915_36569_+|transposase	TnsA-like heteromeric transposase endonuclease subunit	transposase	NA	NA	NA	NA
WP_016343813.1|38326_39451_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_079276887.1|39447_40356_+	TniQ family protein	NA	NA	NA	NA	NA
WP_162145473.1|40418_41717_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041927470.1|41654_42890_-|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	44.6	1.2e-82
WP_016343816.1|43601_44993_+|transposase	transposase	transposase	A0A7P9	Microcystis_virus	29.2	5.0e-24
WP_158022931.1|44989_45448_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016343818.1|45517_45856_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016343819.1|45855_47619_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041928124.1|47632_47899_-	DUF2694 family protein	NA	NA	NA	NA	NA
WP_016343821.1|47951_49076_-	DUF4226 domain-containing protein	NA	NA	NA	NA	NA
WP_041928216.1|49648_51592_+	hypothetical protein	NA	V5UNW4	Mycobacterium_phage	46.3	8.0e-145
WP_016343823.1|51772_52588_-	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	42.1	2.4e-50
WP_016343824.1|52587_53805_-|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
WP_158022933.1|53837_54116_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041927470.1|54362_55598_+|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	44.6	1.2e-82
WP_016343825.1|56165_56474_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016343826.1|56736_57198_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041928130.1|57274_57700_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158022935.1|58019_58997_-	AAA family ATPase	NA	H7BUL8	unidentified_phage	27.0	2.2e-10
WP_016343829.1|60997_62071_+	hypothetical protein	NA	A0A2H4JA91	uncultured_Caudovirales_phage	42.7	4.6e-09
WP_016343831.1|64105_64900_+|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 2
NC_021278	Mycobacteroides abscessus subsp. bolletii 50594 plasmid 1, complete sequence	172814	83742	135443	172814	transposase,integrase	Bacillus_phage(14.29%)	52	82788:82803	138955:138970
82788:82803	attL	ACGTCATCGCCGAACA	NA	NA	NA	NA
WP_079276894.1|83742_84996_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_099188425.1|85718_87596_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_158022940.1|87676_88018_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158022942.1|89376_89520_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016343849.1|89899_90826_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_016343850.1|91302_92079_-	haloacid dehalogenase type II	NA	NA	NA	NA	NA
WP_016343851.1|92075_93104_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_016343852.1|93090_93777_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	36.7	4.2e-32
WP_095786048.1|93892_94549_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_016343854.1|94545_95208_+	DUF2064 domain-containing protein	NA	NA	NA	NA	NA
WP_016343855.1|95209_95839_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_016343856.1|95835_96939_+	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_016343857.1|96935_97394_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016343858.1|97319_98669_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016343859.1|98714_99137_-	heavy metal-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_016343860.1|99399_99762_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016343861.1|99792_100269_-	peroxiredoxin family protein	NA	NA	NA	NA	NA
WP_016343862.1|100661_101321_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_016343863.1|101415_101982_+	redoxin domain-containing protein	NA	NA	NA	NA	NA
WP_016343864.1|102186_102432_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016343865.1|102497_103472_+	zinc-binding dehydrogenase	NA	E3SJ82	Synechococcus_phage	25.4	1.6e-05
WP_016343866.1|103510_104107_-	CGNR zinc finger domain-containing protein	NA	NA	NA	NA	NA
WP_016343867.1|104206_104776_+	TIGR03086 family protein	NA	NA	NA	NA	NA
WP_109776941.1|104875_106378_+	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_016343869.1|106374_107406_+	NAD-dependent epimerase/dehydratase family protein	NA	A0A2H4UUK0	Bodo_saltans_virus	28.8	6.5e-21
WP_162145477.1|107536_108046_+	RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_016343871.1|108042_108747_+	Rieske (2Fe-2S) protein	NA	NA	NA	NA	NA
WP_079276897.1|108996_109302_+	cupredoxin family copper-binding protein	NA	NA	NA	NA	NA
WP_016343873.1|109298_110240_+	metallophosphoesterase	NA	NA	NA	NA	NA
WP_048896566.1|110272_110632_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041928147.1|113089_113416_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041928149.1|114113_114692_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041928152.1|114670_115222_-	DUF4226 domain-containing protein	NA	NA	NA	NA	NA
WP_041928154.1|115345_116029_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041927470.1|116280_117516_-|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	44.6	1.2e-82
WP_041928156.1|117698_118655_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162145474.1|118793_118949_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041928158.1|119155_120070_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158022946.1|120119_120860_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016343880.1|121226_121487_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016343881.1|121664_122912_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016343882.1|123183_123882_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016343883.1|123946_124894_+	ImmA/IrrE family metallo-endopeptidase	NA	B6SBZ6	Clostridium_virus	26.2	9.6e-11
WP_016343884.1|125248_125443_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016343885.1|125650_126034_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016343886.1|126389_126977_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041928164.1|127100_128594_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	A0A2H4JEQ4	uncultured_Caudovirales_phage	25.1	8.6e-06
WP_016343888.1|128590_129406_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_016343889.1|129960_130695_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016343890.1|130744_131989_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
WP_016343891.1|132067_133225_+|integrase	tyrosine-type recombinase/integrase	integrase	S5MBZ0	Brevibacillus_phage	32.6	5.8e-10
WP_016343892.1|133208_135443_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
138955:138970	attR	ACGTCATCGCCGAACA	NA	NA	NA	NA
>prophage 1
NC_021279	Mycobacteroides abscessus subsp. bolletii 50594 plasmid 2, complete sequence	97240	33558	42240	97240		Mycobacterium_phage(87.5%)	13	NA	NA
WP_016341444.1|33558_33954_+	single-stranded DNA-binding protein	NA	A0A0U4IHP1	Arthrobacter_phage	50.4	2.3e-19
WP_016341445.1|34069_35812_+	ParB N-terminal domain-containing protein	NA	V5UQR1	Mycobacterium_phage	48.2	1.1e-116
WP_016341446.1|36277_37318_+	DUF945 domain-containing protein	NA	Q1A023	Mycobacterium_phage	44.2	9.1e-71
WP_041928315.1|37393_37843_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041928317.1|37839_38346_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041928319.1|38342_38621_+	hypothetical protein	NA	A0A0A7HAI7	Mycobacterium_phage	68.8	3.0e-21
WP_016341448.1|38746_39088_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041928321.1|39129_39744_+	hypothetical protein	NA	V5UP21	Mycobacterium_phage	70.8	3.6e-75
WP_162145478.1|39815_40079_+	hypothetical protein	NA	V5UPD3	Mycobacterium_phage	63.2	1.7e-26
WP_016341450.1|40557_40806_+	glutaredoxin-like protein NrdH	NA	V5UN81	Mycobacterium_phage	64.6	8.3e-23
WP_041928326.1|40802_41429_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162145479.1|41431_41599_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016341451.1|41595_42240_+	hypothetical protein	NA	V5UQP3	Mycobacterium_phage	49.1	4.6e-49
