assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000427035.1_09mas018883	NC_021485	Streptococcus agalactiae 09mas018883, complete genome	1	940236-940997	1,1,1,2	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas9,cas1,cas2,csn2	cas3,DinG,cas9,cas1,cas2,csn2,csm6,DEDDh,csa3	Type II-B,Type II-A,Type II-C	GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC,GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC,GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC,GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	36,36,36,36	0	0	NA	NA	II-A:II-A:II-A:II-A	9,10,11,9	11	TypeII-B,TypeII-A,TypeII-C	cas3,DinG,cas9,cas1,cas2,csn2,csm6,DEDDh,csa3	NA,NA	NA|124aa|up_9|NC_021485.1_929617_929989_+	pfam08349, DUF1722, Protein of unknown function (DUF1722)	NA|127aa|up_8|NC_021485.1_930013_930394_+	TIGR02328, TIGR02328, conserved hypothetical protein	NA|377aa|up_7|NC_021485.1_930485_931616_+	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase	NA|246aa|up_6|NC_021485.1_931619_932357_+	pfam01643, Acyl-ACP_TE, Acyl-ACP thioesterase	NA|257aa|up_5|NC_021485.1_932357_933128_+	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase	NA|219aa|up_4|NC_021485.1_933117_933774_+	COG4478, COG4478, Predicted membrane protein [Function unknown]	cas9|1371aa|up_3|NC_021485.1_934161_938274_+	TIGR01865, conserved_hypothetical_protein, CRISPR subtype II/NMENI RNA-guided endonuclease Cas9/Csn1	cas1|290aa|up_2|NC_021485.1_938275_939145_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|114aa|up_1|NC_021485.1_939141_939483_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	csn2|222aa|up_0|NC_021485.1_939469_940135_+	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2	NA|139aa|down_0|NC_021485.1_941554_941971_+	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	NA|611aa|down_1|NC_021485.1_942106_943939_+	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|878aa|down_2|NC_021485.1_944185_946819_+	NF033189, internalin_A, class 1 internalin InlA	NA|220aa|down_3|NC_021485.1_946918_947578_+	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only]	NA|155aa|down_4|NC_021485.1_947586_948051_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|145aa|down_5|NC_021485.1_948050_948485_+	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|931aa|down_6|NC_021485.1_948636_951429_+	COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism]	NA|368aa|down_7|NC_021485.1_951428_952532_+	pfam11187, DUF2974, Protein of unknown function (DUF2974)	NA|194aa|down_8|NC_021485.1_952652_953234_-	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others	NA|204aa|down_9|NC_021485.1_954001_954613_+	COG0398, COG0398, Uncharacterized conserved protein [Function unknown]
GCF_000427035.1_09mas018883	NC_021485	Streptococcus agalactiae 09mas018883, complete genome	2	2005935-2006204	2	CRT	no		cas3,DinG,cas9,cas1,cas2,csn2,csm6,DEDDh,csa3	Orphan	CTGGTTTNGCNTCTGGTT	18	1	1	2006085-2006102	NC_021485.1_2005929-2005946	NA	6	6	Orphan	cas3,DinG,cas9,cas1,cas2,csn2,csm6,DEDDh,csa3	NA|203aa|up_4|NC_021485.1_1999143_1999752_+,NA	NA|108aa|up_9|NC_021485.1_1990703_1991027_-	COG4392, COG4392, Predicted membrane protein [Function unknown]	NA|231aa|up_8|NC_021485.1_1991016_1991709_-	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism]	NA|1572aa|up_7|NC_021485.1_1992031_1996747_+	cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 family domain in Streptococcal C5a peptidases	NA|229aa|up_6|NC_021485.1_1996979_1997666_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|463aa|up_5|NC_021485.1_1997662_1999051_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|203aa|up_4|NC_021485.1_1999143_1999752_+	NA	NA|834aa|up_3|NC_021485.1_1999841_2002343_-	PRK00390, leuS, leucyl-tRNA synthetase; Validated	NA|416aa|up_2|NC_021485.1_2002719_2003967_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|282aa|up_1|NC_021485.1_2004009_2004855_-	cd07208, Pat_hypo_Ecoli_yjju_like, Hypothetical patatin similar to yjju protein of Escherichia coli	NA|180aa|up_0|NC_021485.1_2004992_2005532_-	PRK05609, nusG, transcription antitermination protein NusG; Validated	NA|275aa|down_0|NC_021485.1_2007456_2008280_+	pfam13359, DDE_Tnp_4, DDE superfamily endonuclease	NA|58aa|down_1|NC_021485.1_2009170_2009344_-	COG0690, SecE, Preprotein translocase subunit SecE [Intracellular trafficking and secretion]	NA|51aa|down_2|NC_021485.1_2009379_2009532_-	PRK00504, rpmG, 50S ribosomal protein L33; Validated	NA|774aa|down_3|NC_021485.1_2009580_2011902_-	COG0744, MrcB, Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane]	NA|295aa|down_4|NC_021485.1_2011945_2012830_+	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|547aa|down_5|NC_021485.1_2012854_2014495_-	COG4640, COG4640, Predicted membrane protein [Function unknown]	NA|404aa|down_6|NC_021485.1_2014664_2015876_-	PRK05362, PRK05362, phosphopentomutase; Provisional	NA|224aa|down_7|NC_021485.1_2015942_2016614_-	PRK00507, PRK00507, deoxyribose-phosphate aldolase; Provisional	NA|401aa|down_8|NC_021485.1_2016643_2017846_-	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism]	NA|260aa|down_9|NC_021485.1_2017866_2018646_-	cd17767, UP_EcUdp-like, uridine phosphorylases similar to Escherichia coli Udp and related phosphorylases
