The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	0	9847	5521023		Mycobacterium_phage(33.33%)	5	NA	NA
WP_008262505.1|2070_3270_+	DNA polymerase III subunit beta	NA	G8I4E4	Mycobacterium_phage	41.5	8.3e-68
WP_008262508.1|3270_4428_+	DNA replication/repair protein RecF	NA	NA	NA	NA	NA
WP_008262510.1|4424_4988_+	DUF721 family protein	NA	NA	NA	NA	NA
WP_009954877.1|5245_7279_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	43.1	2.7e-135
WP_020821255.1|7330_9847_+	DNA gyrase subunit A	NA	A0A172JHV7	Bacillus_phage	30.2	6.4e-94
>prophage 2
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	13824	19988	5521023		Bodo_saltans_virus(25.0%)	7	NA	NA
WP_008262529.1|13824_14373_+	peptidylprolyl isomerase	NA	A0A2H4UTF4	Bodo_saltans_virus	44.6	7.5e-24
WP_081656300.1|14395_14821_-	PH domain-containing protein	NA	NA	NA	NA	NA
WP_003872098.1|14976_15258_-	cell division protein CrgA	NA	NA	NA	NA	NA
WP_020821260.1|15387_16131_+	DUF881 domain-containing protein	NA	NA	NA	NA	NA
WP_020821261.1|16175_16862_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	47.4	3.7e-44
WP_008262551.1|16839_18720_-	Stk1 family PASTA domain-containing Ser/Thr kinase	NA	L7RGQ5	Acanthamoeba_polyphaga_moumouvirus	35.1	6.1e-17
WP_036429717.1|18716_19988_-	serine/threonine protein kinase	NA	A0A2R8FF19	Brazilian_cedratvirus	28.9	3.2e-17
>prophage 3
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	37540	38359	5521023		Rhodococcus_phage(100.0%)	1	NA	NA
WP_020821272.1|37540_38359_+	C40 family peptidase	NA	A0A1W6DXV0	Rhodococcus_phage	55.4	8.9e-21
>prophage 4
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	48342	53300	5521023	tRNA	Staphylococcus_phage(50.0%)	4	NA	NA
WP_020821280.1|48342_51246_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	45.0	6.6e-212
WP_008262630.1|51251_51923_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_008262632.1|51981_52485_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_008262634.1|52550_53300_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.2	3.3e-22
>prophage 5
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	65073	66168	5521023		Stenotrophomonas_phage(100.0%)	1	NA	NA
WP_008262662.1|65073_66168_-	inositol-3-phosphate synthase	NA	A0A0H4IPK5	Stenotrophomonas_phage	42.2	4.6e-73
>prophage 6
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	73780	78695	5521023		uncultured_Caudovirales_phage(50.0%)	4	NA	NA
WP_008262692.1|73780_74299_+	single-stranded DNA-binding protein	NA	A0A2H4JEL4	uncultured_Caudovirales_phage	86.1	3.3e-53
WP_003874730.1|74335_74590_+	30S ribosomal protein S18	NA	NA	NA	NA	NA
WP_008262694.1|74620_75079_+	50S ribosomal protein L9	NA	NA	NA	NA	NA
WP_008262695.1|75608_78695_+	replicative DNA helicase	NA	G9BWB0	Planktothrix_phage	50.5	8.8e-21
>prophage 7
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	83172	83376	5521023		Lactococcus_phage(100.0%)	1	NA	NA
WP_008262707.1|83172_83376_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	50.8	2.9e-13
>prophage 8
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	89662	92098	5521023		Trichoplusia_ni_ascovirus(100.0%)	3	NA	NA
WP_008262720.1|89662_90433_-	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	29.4	1.2e-14
WP_008262722.1|90561_91248_+	nitroreductase family protein	NA	NA	NA	NA	NA
WP_008262724.1|91354_92098_+	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	25.4	1.3e-07
>prophage 9
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	102385	103819	5521023		Pandoravirus(100.0%)	1	NA	NA
WP_008262753.1|102385_103819_+	FAD-binding oxidoreductase	NA	S4VRT3	Pandoravirus	35.3	1.5e-23
>prophage 10
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	108014	108599	5521023		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_036429872.1|108014_108599_+	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	49.4	1.1e-38
>prophage 11
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	132887	133859	5521023		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_020821307.1|132887_133859_+	2-hydroxyacid dehydrogenase	NA	A0A1B1IVB5	uncultured_Mediterranean_phage	29.6	1.2e-16
>prophage 12
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	137409	138228	5521023		Lake_Baikal_phage(100.0%)	1	NA	NA
WP_008262844.1|137409_138228_-	CbbQ/NirQ/NorQ/GpvN family protein	NA	A0A2H4N7N3	Lake_Baikal_phage	28.8	6.6e-16
>prophage 13
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	141614	148049	5521023		Burkholderia_virus(33.33%)	8	NA	NA
WP_008262852.1|141614_142943_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	28.9	9.9e-46
WP_008262854.1|143232_143805_-	hemerythrin domain-containing protein	NA	NA	NA	NA	NA
WP_008262860.1|144146_145031_+	class I SAM-dependent methyltransferase	NA	A0A2K9L4K8	Tupanvirus	30.5	4.0e-27
WP_008262862.1|145114_145669_+	hypothetical protein	NA	NA	NA	NA	NA
WP_008262864.1|145739_146093_+	VOC family protein	NA	NA	NA	NA	NA
WP_008262866.1|146100_146367_-	YdeI/OmpD-associated family protein	NA	NA	NA	NA	NA
WP_008262867.1|146363_147257_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008262868.1|147329_148049_+	CoA pyrophosphatase	NA	E5DQL1	Aeromonas_phage	36.1	2.1e-05
>prophage 14
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	158043	159372	5521023		Feldmannia_species_virus(100.0%)	1	NA	NA
WP_008262884.1|158043_159372_+	HAMP domain-containing histidine kinase	NA	B5LWN0	Feldmannia_species_virus	26.1	1.1e-09
>prophage 15
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	165645	170886	5521023	protease	Mycobacterium_phage(100.0%)	3	NA	NA
WP_014381603.1|165645_167304_+|protease	type VII secretion system ESX-2 serine protease mycosin MycP2	protease	A0A0A7HDD8	Mycobacterium_phage	36.2	5.5e-70
WP_020821312.1|167300_168923_+	type VII secretion protein EccE	NA	NA	NA	NA	NA
WP_008262898.1|169011_170886_+	type VII secretion system ESX-2 AAA family ATPase EccA2	NA	V5UQM2	Mycobacterium_phage	30.1	2.3e-48
>prophage 16
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	184723	185950	5521023		uncultured_virus(100.0%)	1	NA	NA
WP_020821323.1|184723_185950_-	DNA polymerase IV	NA	A0A218MNF2	uncultured_virus	32.9	4.7e-18
>prophage 17
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	192877	193501	5521023		Bacillus_thuringiensis_phage(100.0%)	1	NA	NA
WP_007771867.1|192877_193501_-	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	44.1	2.7e-38
>prophage 18
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	201971	203231	5521023	tRNA	Orpheovirus(100.0%)	1	NA	NA
WP_020821333.1|201971_203231_+|tRNA	serine--tRNA ligase	tRNA	A0A2I2L4X3	Orpheovirus	33.3	1.0e-52
>prophage 19
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	215735	216926	5521023		Sinorhizobium_phage(100.0%)	1	NA	NA
WP_020821344.1|215735_216926_+	UDP-galactopyranose mutase	NA	A0A0F6TGN8	Sinorhizobium_phage	45.6	3.9e-86
>prophage 20
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	222674	224783	5521023		Macacine_betaherpesvirus(100.0%)	2	NA	NA
WP_008263023.1|222674_223718_+	esterase family protein	NA	A0A2I6B0H1	Macacine_betaherpesvirus	80.8	2.8e-152
WP_008263024.1|223880_224783_+	esterase family protein	NA	A0A2I6B2Q9	Macacine_betaherpesvirus	39.1	4.1e-43
>prophage 21
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	261476	262274	5521023		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
WP_008263074.1|261476_262274_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.3	5.8e-09
>prophage 22
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	271899	272967	5521023		Pacmanvirus(100.0%)	1	NA	NA
WP_036454376.1|271899_272967_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.4	1.2e-14
>prophage 23
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	277054	285794	5521023		Mycobacterium_phage(20.0%)	9	NA	NA
WP_008263106.1|277054_277210_+	hypothetical protein	NA	A0A1C9EH86	Mycobacterium_phage	52.9	7.5e-06
WP_020821359.1|277363_278068_+	two-component system response regulator TcrX	NA	W8CYM9	Bacillus_phage	36.9	1.3e-36
WP_086427168.1|278102_279560_+	HAMP domain-containing histidine kinase	NA	Q8QKV7	Ectocarpus_siliculosus_virus	28.1	7.4e-10
WP_041320739.1|279560_280052_-	lipoprotein LpqH	NA	NA	NA	NA	NA
WP_051197683.1|280178_282095_+	MBL fold metallo-hydrolase	NA	A0A2P0VMX1	Tetraselmis_virus	44.4	6.2e-142
WP_020821363.1|282102_283071_-	NADPH:quinone oxidoreductase family protein	NA	NA	NA	NA	NA
WP_020821364.1|283070_283694_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_020821365.1|283674_284958_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_020821366.1|285029_285794_-	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	30.8	5.9e-19
>prophage 24
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	290804	291899	5521023		Planktothrix_phage(100.0%)	1	NA	NA
WP_020821370.1|290804_291899_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.9	3.7e-22
>prophage 25
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	295565	296024	5521023		Pandoravirus(100.0%)	1	NA	NA
WP_020821374.1|295565_296024_+	nucleoside deaminase	NA	S4VYT2	Pandoravirus	37.9	2.6e-06
>prophage 26
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	303082	306725	5521023		Mycobacterium_phage(50.0%)	4	NA	NA
WP_020821379.1|303082_303577_-	NINE protein	NA	A0A0A7RVM3	Mycobacterium_phage	43.4	8.0e-09
WP_041320743.1|303714_304101_+	DUF2237 domain-containing protein	NA	NA	NA	NA	NA
WP_020821382.1|304201_305473_+	sulfotransferase	NA	NA	NA	NA	NA
WP_020821383.1|305486_306725_+	MBL fold metallo-hydrolase	NA	A0A1V0SGC6	Hokovirus	28.9	1.8e-25
>prophage 27
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	321293	322283	5521023		Cedratvirus(100.0%)	1	NA	NA
WP_020821391.1|321293_322283_+	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1M7XU89	Cedratvirus	32.3	1.4e-25
>prophage 28
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	330419	330785	5521023		Streptomyces_phage(100.0%)	1	NA	NA
WP_020821400.1|330419_330785_-	hypothetical protein	NA	A0A2D1GP18	Streptomyces_phage	49.5	5.0e-16
>prophage 29
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	341329	342316	5521023		Cowpox_virus(100.0%)	1	NA	NA
WP_020821409.1|341329_342316_-	SDR family NAD(P)-dependent oxidoreductase	NA	G0XSR1	Cowpox_virus	30.3	5.7e-06
>prophage 30
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	348552	351674	5521023		Bacteriophage(50.0%)	2	NA	NA
WP_008263232.1|348552_350400_+	DNA polymerase III subunits gamma/tau	NA	A0A1L2BWV7	Bacteriophage	31.6	2.3e-40
WP_008263234.1|350411_351674_-	class I SAM-dependent methyltransferase	NA	A0A2I2L5L3	Orpheovirus	32.2	1.6e-32
>prophage 31
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	357954	358947	5521023		Croceibacter_phage(100.0%)	1	NA	NA
WP_041320752.1|357954_358947_+	DEDDh family exonuclease	NA	I6R9X8	Croceibacter_phage	28.2	1.9e-09
>prophage 32
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	384705	385170	5521023		Bacillus_phage(100.0%)	1	NA	NA
WP_008263292.1|384705_385170_+	GatB/YqeY domain-containing protein	NA	A0A218KC79	Bacillus_phage	35.6	2.6e-09
>prophage 33
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	402886	406091	5521023		Tsukamurella_phage(50.0%)	5	NA	NA
WP_008263340.1|402886_403237_+	WhiB family transcriptional regulator	NA	A0A159B6S6	Tsukamurella_phage	50.0	1.3e-10
WP_020821442.1|403249_404380_-	ArsA family ATPase	NA	NA	NA	NA	NA
WP_008263344.1|404376_405396_-	ArsA family ATPase	NA	NA	NA	NA	NA
WP_008263345.1|405459_405621_+	DUF4177 domain-containing protein	NA	NA	NA	NA	NA
WP_008263347.1|405623_406091_+	RidA family protein	NA	M1I5B0	Acanthocystis_turfacea_Chlorella_virus	33.6	1.4e-15
>prophage 34
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	410611	416189	5521023	holin,protease	uncultured_Mediterranean_phage(50.0%)	5	NA	NA
WP_008263368.1|410611_411805_+|protease	acid resistance serine protease MarP	protease	A0A1B1IRH0	uncultured_Mediterranean_phage	25.0	9.9e-05
WP_020821445.1|411797_412769_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_014381700.1|412769_413288_-|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_020188338.1|413524_414223_+	peptidase	NA	NA	NA	NA	NA
WP_020821446.1|414233_416189_-	acetate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	40.0	2.8e-89
>prophage 35
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	421256	422876	5521023		Bacillus_virus(100.0%)	1	NA	NA
WP_036455418.1|421256_422876_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.1	1.6e-13
>prophage 36
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	431058	439283	5521023		uncultured_Mediterranean_phage(50.0%)	5	NA	NA
WP_008263427.1|431058_433392_-	DEAD/DEAH box helicase	NA	A0A1B1IUF6	uncultured_Mediterranean_phage	29.2	4.6e-06
WP_007772268.1|433651_433855_+	cold shock protein CspA	NA	A0A1X9IGI9	Lactococcus_phage	57.8	8.9e-15
WP_014710834.1|434017_434608_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014710835.1|434811_437625_+	type I DNA topoisomerase	NA	A0A2K9L5F8	Tupanvirus	30.5	6.2e-98
WP_085976420.1|437621_439283_-	adenylate/guanylate cyclase domain-containing protein	NA	A0A1B1IWY2	uncultured_Mediterranean_phage	32.8	1.7e-18
>prophage 37
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	442541	447567	5521023		Cafeteria_roenbergensis_virus(33.33%)	6	NA	NA
WP_014710838.1|442541_443486_+	GDP-mannose 4,6-dehydratase	NA	E3T4Y8	Cafeteria_roenbergensis_virus	31.2	1.3e-31
WP_009953616.1|443482_443824_-	DUF2304 domain-containing protein	NA	NA	NA	NA	NA
WP_009953617.1|443820_444519_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_020821464.1|444554_445805_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020821465.1|445929_447057_+	DUF475 domain-containing protein	NA	A0A172Q0Y5	Acinetobacter_phage	40.7	1.4e-56
WP_008263447.1|447078_447567_-	inorganic diphosphatase	NA	A0A2H4J8U1	uncultured_Caudovirales_phage	46.1	1.6e-30
>prophage 38
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	451123	451735	5521023		Hokovirus(100.0%)	1	NA	NA
WP_020821468.1|451123_451735_+	hypoxanthine phosphoribosyltransferase	NA	A0A1V0SEQ1	Hokovirus	25.7	3.5e-06
>prophage 39
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	460241	464141	5521023		Bathycoccus_sp._RCC1105_virus(33.33%)	3	NA	NA
WP_008263469.1|460241_462674_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	E5ESM9	Bathycoccus_sp._RCC1105_virus	41.3	4.4e-100
WP_014378981.1|462690_463293_+	GTP cyclohydrolase I FolE	NA	E7DN69	Pneumococcus_phage	54.1	1.5e-46
WP_085976422.1|463289_464141_+	dihydropteroate synthase	NA	S4VNV0	Pandoravirus	32.7	9.2e-21
>prophage 40
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	470341	475184	5521023	tRNA,protease	Tupanvirus(33.33%)	3	NA	NA
WP_020821483.1|470341_471838_+|tRNA	lysine--tRNA ligase	tRNA	A0A2K9KZX5	Tupanvirus	37.3	2.5e-74
WP_008263502.1|471965_472304_+	iron-regulated nucleoid-associated protein Lsr2	NA	A0A2D1GPL8	Mycobacterium_phage	41.5	3.5e-16
WP_020821484.1|472640_475184_+|protease	ATP-dependent protease ATP-binding subunit ClpC	protease	K4FB40	Cronobacter_phage	39.6	1.4e-128
>prophage 41
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	485312	486722	5521023	tRNA	Catovirus(100.0%)	1	NA	NA
WP_036454495.1|485312_486722_+|tRNA	cysteine--tRNA ligase	tRNA	A0A1V0SAQ2	Catovirus	27.1	7.8e-41
>prophage 42
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	493144	493966	5521023		Pithovirus(100.0%)	1	NA	NA
WP_009957017.1|493144_493966_-	metal ABC transporter ATP-binding protein	NA	W5SAS9	Pithovirus	26.8	4.9e-11
>prophage 43
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	511432	512977	5521023		Hepacivirus(100.0%)	1	NA	NA
WP_020821507.1|511432_512977_-	fatty acid--CoA ligase family protein	NA	Q75ZG1	Hepacivirus	26.4	1.8e-38
>prophage 44
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	523587	524493	5521023		Trichoplusia_ni_ascovirus(100.0%)	1	NA	NA
WP_020821514.1|523587_524493_+	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	29.2	2.0e-10
>prophage 45
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	537713	538646	5521023		Ostreococcus_lucimarinus_virus(100.0%)	1	NA	NA
WP_041320768.1|537713_538646_+	acetaldehyde dehydrogenase (acetylating)	NA	G9E526	Ostreococcus_lucimarinus_virus	32.9	9.4e-35
>prophage 46
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	554515	559374	5521023		Staphylococcus_phage(50.0%)	4	NA	NA
WP_008263720.1|554515_556168_+	acyl-CoA synthetase	NA	A0A2H4PQM9	Staphylococcus_phage	23.8	6.0e-16
WP_020821533.1|556198_556966_+	fructosamine kinase family protein	NA	NA	NA	NA	NA
WP_020821534.1|557002_557827_+	amidohydrolase	NA	NA	NA	NA	NA
WP_020821535.1|557823_559374_+	acetolactate synthase large subunit	NA	E5EQ70	Micromonas_sp._RCC1109_virus	31.8	5.6e-08
>prophage 47
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	594501	601286	5521023		Bacillus_phage(50.0%)	8	NA	NA
WP_008263800.1|594501_595221_+	two-component system response regulator PhoP	NA	W8CYM9	Bacillus_phage	36.3	2.8e-34
WP_020821555.1|595261_596704_+	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	29.5	9.2e-21
WP_008263807.1|596691_597096_-	HIT family protein	NA	NA	NA	NA	NA
WP_008263809.1|597102_597540_-	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_008263811.1|597727_598855_-	NDMA-dependent alcohol dehydrogenase	NA	E3SJ82	Synechococcus_phage	27.6	1.2e-28
WP_008263812.1|599166_599706_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008263814.1|599708_599918_-	ferredoxin	NA	NA	NA	NA	NA
WP_008263815.1|599930_601286_-	cytochrome P450	NA	M1PWN0	Moumouvirus	26.9	1.6e-11
>prophage 48
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	618405	621431	5521023		Mollivirus(50.0%)	2	NA	NA
WP_008263844.1|618405_619296_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0M4JBD3	Mollivirus	37.3	1.2e-42
WP_041320783.1|619292_621431_+	S9 family peptidase	NA	A0A1V0SHT0	Klosneuvirus	27.1	2.0e-27
>prophage 49
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	632167	633253	5521023		Synechococcus_phage(100.0%)	1	NA	NA
WP_008263879.1|632167_633253_+	NAD(P)-dependent oxidoreductase	NA	A0A0E3FNQ3	Synechococcus_phage	32.1	6.7e-08
>prophage 50
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	643245	644259	5521023		Mollivirus(100.0%)	1	NA	NA
WP_020821570.1|643245_644259_-	Dyp-type peroxidase	NA	A0A0M5KAH8	Mollivirus	32.9	2.4e-20
>prophage 51
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	647956	655386	5521023	protease	Microbacterium_phage(33.33%)	6	NA	NA
WP_089151317.1|647956_650290_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	63.0	1.5e-270
WP_014710914.1|650348_650948_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_036454602.1|650937_652152_-	MCE family protein	NA	NA	NA	NA	NA
WP_014710916.1|652171_652561_+	hypothetical protein	NA	NA	NA	NA	NA
WP_008263903.1|652698_654225_+	amidophosphoribosyltransferase	NA	A0A1B1ISH6	uncultured_Mediterranean_phage	29.9	2.3e-46
WP_008263904.1|654291_655386_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	37.9	7.9e-57
>prophage 52
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	662316	668079	5521023		Bacillus_phage(33.33%)	6	NA	NA
WP_014710924.1|662316_663105_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	32.5	9.1e-15
WP_020821576.1|663101_664031_+	mycothiol synthase	NA	NA	NA	NA	NA
WP_020821577.1|664168_665320_+	phosphate ABC transporter substrate-binding protein PstS	NA	E3SKK5	Synechococcus_phage	31.0	2.5e-21
WP_036454606.1|665335_666379_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_014710928.1|666375_667290_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_008263919.1|667302_668079_+	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.0	1.6e-16
>prophage 53
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	675549	679219	5521023	integrase	Streptococcus_phage(33.33%)	4	666928:666943	685899:685914
666928:666943	attL	CTGCGCGAGGCCAGCT	NA	NA	NA	NA
WP_020188695.1|675549_675948_-	helix-turn-helix transcriptional regulator	NA	E4ZFI8	Streptococcus_phage	30.4	6.0e-07
WP_008263929.1|675992_676493_-	nucleoside deaminase	NA	S4VYZ2	Pandoravirus	33.3	7.3e-10
WP_020821579.1|676607_677507_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_008263933.1|678061_679219_-|integrase	site-specific integrase	integrase	A0A0E3XBN7	Gordonia_phage	29.7	6.4e-33
685899:685914	attR	AGCTGGCCTCGCGCAG	NA	NA	NA	NA
>prophage 54
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	682641	684093	5521023		Mycobacterium_phage(100.0%)	1	NA	NA
WP_008263950.1|682641_684093_-	hypothetical protein	NA	A0A222ZLS3	Mycobacterium_phage	38.6	2.0e-71
>prophage 55
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	709572	711443	5521023		Synechococcus_phage(50.0%)	2	NA	NA
WP_014379137.1|709572_709911_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	A0A222YX16	Synechococcus_phage	34.3	1.1e-06
WP_014710958.1|710036_711443_+	acyl--CoA ligase	NA	Q75ZG1	Hepacivirus	27.3	7.0e-34
>prophage 56
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	722792	724409	5521023		Lactobacillus_phage(100.0%)	1	NA	NA
WP_020821599.1|722792_724409_-	FAD-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	27.8	8.1e-26
>prophage 57
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	728688	730428	5521023		Lactobacillus_phage(100.0%)	1	NA	NA
WP_036454622.1|728688_730428_+	FAD-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	24.5	2.1e-19
>prophage 58
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	733575	736818	5521023		Mycobacterium_phage(50.0%)	3	NA	NA
WP_008253616.1|733575_734397_+	alpha/beta fold hydrolase	NA	A0A249XTU1	Mycobacterium_phage	26.3	4.7e-06
WP_139315498.1|734401_736006_-	multicopper oxidase family protein	NA	NA	NA	NA	NA
WP_008253618.1|736095_736818_-	SDR family oxidoreductase	NA	A0A0G2Y8L6	Acanthamoeba_polyphaga_mimivirus	32.3	3.2e-06
>prophage 59
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	740652	741462	5521023		Trichoplusia_ni_ascovirus(100.0%)	1	NA	NA
WP_020821610.1|740652_741462_+	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	30.7	3.1e-18
>prophage 60
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	797369	798071	5521023		Escherichia_phage(100.0%)	1	NA	NA
WP_007168623.1|797369_798071_-	SDR family oxidoreductase	NA	I7B2R4	Escherichia_phage	30.8	8.7e-09
>prophage 61
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	824557	830420	5521023		Catovirus(50.0%)	6	NA	NA
WP_081656309.1|824557_825994_+	fatty acid--CoA ligase family protein	NA	A0A1V0SBX8	Catovirus	25.2	1.3e-19
WP_007168654.1|826291_827215_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007168655.1|827211_827886_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086426963.1|827896_828523_+	fatty-acid--CoA ligase	NA	NA	NA	NA	NA
WP_007168657.1|828534_828738_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_036454662.1|828734_830420_-	alpha-keto acid decarboxylase family protein	NA	E4WLQ6	Ostreococcus_tauri_virus	20.8	8.8e-07
>prophage 62
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	847940	849590	5521023		Acidianus_filamentous_virus(100.0%)	1	NA	NA
WP_014379227.1|847940_849590_-	DEAD/DEAH box helicase	NA	B2CRJ8	Acidianus_filamentous_virus	23.1	2.7e-16
>prophage 63
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	853753	857332	5521023		Macacine_betaherpesvirus(50.0%)	5	NA	NA
WP_020821671.1|853753_854548_-	transglycosylase family protein	NA	A0A2I6B0Z0	Macacine_betaherpesvirus	65.8	6.6e-05
WP_036454675.1|854977_855256_-	MoaD/ThiS family protein	NA	NA	NA	NA	NA
WP_036454677.1|855260_856355_-	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
WP_009957585.1|856351_856759_-	YccF domain-containing protein	NA	NA	NA	NA	NA
WP_008253852.1|856924_857332_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	46.0	1.3e-09
>prophage 64
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	887395	889783	5521023		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_020821687.1|887395_889783_+	cation-translocating P-type ATPase	NA	M1HN09	Paramecium_bursaria_Chlorella_virus	25.6	3.7e-27
>prophage 65
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	916153	923075	5521023	transposase,integrase	Mycobacterium_phage(33.33%)	5	NA	NA
WP_008253954.1|916153_917083_-	Ku protein	NA	A0A249XRB2	Mycobacterium_phage	50.0	2.7e-66
WP_081490066.1|917256_918420_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	34.1	7.9e-31
WP_008258299.1|918926_920129_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_008253975.1|920088_920796_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008253977.1|920807_923075_+	ATP-dependent DNA ligase	NA	A0A291AUP8	Sinorhizobium_phage	35.6	1.7e-37
>prophage 66
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	936147	942627	5521023		Bacillus_phage(33.33%)	5	NA	NA
WP_020821710.1|936147_938490_+	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	36.8	5.0e-117
WP_008254005.1|938574_938955_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014383910.1|939166_940219_-	M23 family metallopeptidase	NA	A0A2D1G842	Mycobacterium_phage	43.4	9.6e-20
WP_009957827.1|940548_941712_+	ADP-forming succinate--CoA ligase subunit beta	NA	NA	NA	NA	NA
WP_008254012.1|941724_942627_+	succinate--CoA ligase subunit alpha	NA	A0A2K9L5E9	Tupanvirus	31.8	2.6e-13
>prophage 67
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	947866	950093	5521023		Synechococcus_phage(50.0%)	2	NA	NA
WP_020821712.1|947866_948496_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.4	7.5e-20
WP_020821713.1|948509_950093_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	41.6	3.1e-54
>prophage 68
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	954339	955188	5521023		Indivirus(100.0%)	1	NA	NA
WP_020821715.1|954339_955188_+	aldo/keto reductase	NA	A0A1V0SDE7	Indivirus	30.7	3.5e-36
>prophage 69
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	964959	972614	5521023		Bacillus_phage(75.0%)	10	NA	NA
WP_008254065.1|964959_965646_+	two-component system response regulator MrpA	NA	W8CYM9	Bacillus_phage	38.7	1.3e-36
WP_008254067.1|965662_967225_+	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	28.3	2.4e-19
WP_014379290.1|967192_967384_-	hypothetical protein	NA	NA	NA	NA	NA
WP_036454724.1|967297_968752_+	trypsin-like peptidase domain-containing protein	NA	W5SAB9	Pithovirus	34.1	1.1e-05
WP_008254072.1|968811_969309_+	MogA/MoaB family molybdenum cofactor biosynthesis protein	NA	NA	NA	NA	NA
WP_020821724.1|969328_969787_-	large-conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_020821725.1|969854_970535_-	SAF domain-containing protein	NA	NA	NA	NA	NA
WP_081656314.1|970599_970938_-	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
WP_008254092.1|971026_971626_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
WP_008254094.1|971702_972614_+	UTP--glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	39.2	2.6e-45
>prophage 70
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	980172	981471	5521023		Mycobacterium_phage(100.0%)	1	NA	NA
WP_020821736.1|980172_981471_+	cytochrome P450	NA	V5UQK0	Mycobacterium_phage	23.5	4.7e-16
>prophage 71
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	985732	987354	5521023		Synechococcus_phage(50.0%)	2	NA	NA
WP_020821742.1|985732_986749_+	D-glycero-D-manno-heptose 7-phosphate kinase	NA	A0A222YW25	Synechococcus_phage	38.9	4.7e-56
WP_020821743.1|986745_987354_+	SIS domain-containing protein	NA	A0A067XQR2	Caulobacter_phage	33.3	9.5e-12
>prophage 72
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	990523	991141	5521023		Pacmanvirus(100.0%)	1	NA	NA
WP_008254125.1|990523_991141_-	alpha-ketoglutarate-dependent dioxygenase AlkB	NA	A0A1X6WG33	Pacmanvirus	30.4	2.6e-09
>prophage 73
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	994995	996252	5521023		Pandoravirus(100.0%)	1	NA	NA
WP_020821750.1|994995_996252_-	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	42.2	6.7e-36
>prophage 74
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1002433	1003228	5521023		Ostreococcus_mediterraneus_virus(100.0%)	1	NA	NA
WP_020821755.1|1002433_1003228_-	FkbM family methyltransferase	NA	A0A0P0C5Z9	Ostreococcus_mediterraneus_virus	33.3	1.7e-08
>prophage 75
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1010265	1011963	5521023		Catovirus(100.0%)	1	NA	NA
WP_020821761.1|1010265_1011963_+	GMC family oxidoreductase	NA	A0A1V0S9J5	Catovirus	45.3	2.6e-06
>prophage 76
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1034877	1038579	5521023	tRNA	Hokovirus(50.0%)	3	NA	NA
WP_020821778.1|1034877_1036422_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SEZ7	Hokovirus	38.6	2.4e-99
WP_081656315.1|1036440_1037283_+	TatD family hydrolase	NA	NA	NA	NA	NA
WP_020821780.1|1037490_1038579_+	resuscitation-promoting factor	NA	Q856D9	Mycobacterium_phage	57.1	2.6e-20
>prophage 77
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1050541	1055627	5521023	transposase	uncultured_Caudovirales_phage(33.33%)	5	NA	NA
WP_020821789.1|1050541_1050886_-	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	57.8	5.7e-30
WP_008254209.1|1050886_1051867_-	ribose-phosphate diphosphokinase	NA	A0A2H4UV84	Bodo_saltans_virus	34.7	8.1e-45
WP_020821790.1|1051958_1053440_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	NA	NA	NA	NA
WP_008254212.1|1053801_1054395_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_081490066.1|1054463_1055627_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	34.1	7.9e-31
>prophage 78
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1063007	1067585	5521023		Streptococcus_phage(50.0%)	6	NA	NA
WP_020821794.1|1063007_1064300_+	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	55.9	1.4e-132
WP_020821795.1|1064301_1065003_+	septum formation initiator family protein	NA	NA	NA	NA	NA
WP_020821796.1|1064995_1065484_+	DUF501 domain-containing protein	NA	NA	NA	NA	NA
WP_020821797.1|1065477_1066428_+	Ppx/GppA family phosphatase	NA	NA	NA	NA	NA
WP_020821798.1|1066539_1066845_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020821799.1|1066904_1067585_-	response regulator	NA	W8CYM9	Bacillus_phage	31.7	4.5e-26
>prophage 79
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1071072	1073232	5521023		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_020821802.1|1071072_1073232_-	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	24.4	5.4e-25
>prophage 80
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1076763	1077537	5521023		Bacillus_phage(100.0%)	1	NA	NA
WP_008254249.1|1076763_1077537_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.9	9.5e-33
>prophage 81
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1090360	1091992	5521023		Staphylococcus_phage(100.0%)	1	NA	NA
WP_020821813.1|1090360_1091992_+	long-chain fatty acid--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	23.1	1.6e-29
>prophage 82
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1106484	1109927	5521023		Streptococcus_phage(50.0%)	3	NA	NA
WP_020821827.1|1106484_1107891_+	cystathionine beta-synthase	NA	A0A1X9I5K7	Streptococcus_phage	41.1	1.3e-56
WP_020821828.1|1108002_1108737_+	RDD family protein	NA	NA	NA	NA	NA
WP_020821829.1|1108748_1109927_+	cystathionine gamma-synthase	NA	A0A0B5JD48	Pandoravirus	34.0	4.2e-24
>prophage 83
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1116177	1124818	5521023		Flavobacterium_phage(25.0%)	8	NA	NA
WP_008254334.1|1116177_1116966_+	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	36.7	1.2e-14
WP_020821833.1|1117114_1117540_+	hypothetical protein	NA	NA	NA	NA	NA
WP_008254336.1|1117546_1118485_-	type I pantothenate kinase	NA	NA	NA	NA	NA
WP_036454764.1|1118600_1119881_+	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	47.5	8.0e-85
WP_036455524.1|1119977_1120805_+	acyl-ACP desaturase	NA	NA	NA	NA	NA
WP_008254341.1|1121048_1122350_+	PhoH family protein	NA	A0A2L0UZX2	Agrobacterium_phage	31.2	1.0e-23
WP_020821836.1|1122438_1123314_+	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_020821837.1|1123363_1124818_+	adenylate/guanylate cyclase domain-containing protein	NA	A0A1B1IWY2	uncultured_Mediterranean_phage	28.6	3.8e-14
>prophage 84
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1131396	1138947	5521023		Tupanvirus(25.0%)	5	NA	NA
WP_020821844.1|1131396_1134678_+	non-ribosomal peptide synthetase	NA	A0A2K9KZV5	Tupanvirus	31.2	8.1e-65
WP_020821845.1|1134737_1136282_+	carboxylesterase/lipase family protein	NA	M1PNU1	Moumouvirus	33.2	1.5e-32
WP_020821846.1|1136278_1137379_-	NAD-dependent epimerase/dehydratase family protein	NA	Q76TT0	Molluscum_contagiosum_virus	32.1	2.0e-28
WP_085976478.1|1137440_1137653_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
WP_020821847.1|1137699_1138947_-	exodeoxyribonuclease VII large subunit	NA	A0A1B3AYB4	Gordonia_phage	51.5	4.4e-72
>prophage 85
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1143041	1143782	5521023		Autographa_californica_nuclear_polyhedrosis_virus(100.0%)	1	NA	NA
WP_020821850.1|1143041_1143782_+	aminoglycoside 3'-phosphotransferase	NA	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	29.3	8.6e-15
>prophage 86
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1151401	1154723	5521023		Cyanophage(66.67%)	3	NA	NA
WP_008254396.1|1151401_1152811_+	glucose-6-phosphate dehydrogenase	NA	M4SP85	Cyanophage	35.7	7.7e-65
WP_008254398.1|1152827_1153850_+	decarboxylating 6-phosphogluconate dehydrogenase	NA	M4QGJ9	Cyanophage	54.7	9.8e-94
WP_008254400.1|1153859_1154723_-	alpha/beta hydrolase	NA	A0A0M4K6M8	Mollivirus	29.8	5.3e-08
>prophage 87
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1158235	1159813	5521023		Stenotrophomonas_phage(100.0%)	1	NA	NA
WP_020821866.1|1158235_1159813_-	pyruvate, phosphate dikinase	NA	A0A2D2W2B1	Stenotrophomonas_phage	39.3	4.4e-69
>prophage 88
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1179524	1180385	5521023		Lake_Baikal_phage(100.0%)	1	NA	NA
WP_008254440.1|1179524_1180385_+	CbbQ/NirQ/NorQ/GpvN family protein	NA	A0A2H4N7N3	Lake_Baikal_phage	27.5	6.0e-12
>prophage 89
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1201230	1201944	5521023		Bacillus_phage(100.0%)	1	NA	NA
WP_008254463.1|1201230_1201944_-	NAD-dependent deacylase	NA	A0A068EPD4	Bacillus_phage	32.2	2.2e-20
>prophage 90
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1213830	1215450	5521023		Escherichia_phage(100.0%)	1	NA	NA
WP_008254502.1|1213830_1215450_+	nitrate reductase subunit beta	NA	A0A077SL61	Escherichia_phage	46.5	8.7e-20
>prophage 91
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1223184	1225776	5521023		Mamastrovirus(100.0%)	1	NA	NA
WP_162130208.1|1223184_1225776_+	bifunctional FO biosynthesis protein CofGH	NA	A9ZMK9	Mamastrovirus	35.8	4.5e-18
>prophage 92
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1241025	1242977	5521023		Moumouvirus(50.0%)	2	NA	NA
WP_020821891.1|1241025_1241721_+	adenylyl-sulfate kinase	NA	A0A2P1ELS9	Moumouvirus	40.2	5.0e-25
WP_020821892.1|1241717_1242977_+	sulfate adenylyltransferase	NA	A0A2K9L4R9	Tupanvirus	28.1	1.2e-27
>prophage 93
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1251208	1252168	5521023		Staphylococcus_phage(100.0%)	1	NA	NA
WP_036454844.1|1251208_1252168_+	proline dehydrogenase family protein	NA	A0A2H4PQT6	Staphylococcus_phage	27.3	1.5e-27
>prophage 94
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1261772	1263188	5521023		Hepacivirus(100.0%)	1	NA	NA
WP_020821907.1|1261772_1263188_+	acyl-CoA synthetase	NA	Q75ZG1	Hepacivirus	33.3	9.3e-34
>prophage 95
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1282248	1287746	5521023		Staphylococcus_phage(33.33%)	6	NA	NA
WP_014941451.1|1282248_1283214_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.5	3.0e-20
WP_009956308.1|1283203_1283842_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_009956306.1|1283914_1284583_-	O-methyltransferase	NA	NA	NA	NA	NA
WP_014384063.1|1284784_1285540_+	RNA polymerase sigma factor SigE	NA	A0A0F6TH34	Sinorhizobium_phage	29.5	2.1e-08
WP_026071532.1|1285660_1286077_+	DNA-directed RNA polymerase sigma-70 factor	NA	NA	NA	NA	NA
WP_014384064.1|1286231_1287746_+	trypsin-like peptidase domain-containing protein	NA	A0A1B1IRH0	uncultured_Mediterranean_phage	32.2	1.9e-08
>prophage 96
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1297393	1298572	5521023		Planktothrix_phage(100.0%)	1	NA	NA
WP_020821925.1|1297393_1298572_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	36.2	8.5e-25
>prophage 97
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1313646	1320671	5521023		Beihai_Nido-like_virus(33.33%)	4	NA	NA
WP_008254681.1|1313646_1317069_-	TM0106 family RecB-like putative nuclease	NA	A0A1L3KIW1	Beihai_Nido-like_virus	26.8	2.0e-10
WP_085976482.1|1317129_1317711_-	LppP/LprE family lipoprotein	NA	NA	NA	NA	NA
WP_008254685.1|1317831_1319535_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.9	2.8e-53
WP_008254687.1|1319531_1320671_+	acyltransferase	NA	A0A1R3Y5Q6	Salmonella_virus	25.2	4.9e-09
>prophage 98
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1327291	1331158	5521023		Bacillus_virus(100.0%)	1	NA	NA
WP_020821938.1|1327291_1331158_-	bifunctional diguanylate cyclase/phosphodiesterase	NA	G3MA91	Bacillus_virus	31.2	6.9e-07
>prophage 99
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1335841	1341466	5521023		Bacillus_phage(66.67%)	3	NA	NA
WP_020821944.1|1335841_1337608_-	sensor domain-containing protein	NA	M1HTZ5	Acanthocystis_turfacea_Chlorella_virus	31.2	3.7e-16
WP_020821945.1|1337786_1339703_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	31.4	1.2e-49
WP_036455552.1|1339699_1341466_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.3	6.3e-40
>prophage 100
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1350271	1352107	5521023		Planktothrix_phage(100.0%)	1	NA	NA
WP_020821954.1|1350271_1352107_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	7.8e-17
>prophage 101
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1356376	1358218	5521023		Noumeavirus(100.0%)	1	NA	NA
WP_008254752.1|1356376_1358218_+	adenylyl-sulfate kinase	NA	A0A1Q1PNX7	Noumeavirus	25.6	3.4e-28
>prophage 102
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1364993	1367535	5521023	integrase	Mycobacterium_phage(100.0%)	3	1360607:1360620	1369694:1369707
1360607:1360620	attL	GCCGCGTCGGCGGC	NA	NA	NA	NA
WP_020821966.1|1364993_1365674_-	hypothetical protein	NA	Q9ZX60	Mycobacterium_phage	44.9	7.1e-24
WP_020821967.1|1365861_1366185_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020821968.1|1366392_1367535_+|integrase	site-specific integrase	integrase	A0A249XVB5	Mycobacterium_phage	39.5	6.3e-57
1369694:1369707	attR	GCCGCCGACGCGGC	NA	NA	NA	NA
>prophage 103
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1379161	1379317	5521023		Mycobacterium_phage(100.0%)	1	NA	NA
WP_081656370.1|1379161_1379317_+	DUF2510 domain-containing protein	NA	A0A142K829	Mycobacterium_phage	65.7	6.8e-07
>prophage 104
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1392645	1393305	5521023		Pandoravirus(100.0%)	1	NA	NA
WP_008254793.1|1392645_1393305_+	threonylcarbamoyl-AMP synthase	NA	S4VW33	Pandoravirus	36.3	2.5e-18
>prophage 105
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1413978	1419990	5521023		Mycobacterium_phage(40.0%)	6	NA	NA
WP_020821995.1|1413978_1414692_-	hypothetical protein	NA	A0A222ZL07	Mycobacterium_phage	30.6	7.0e-14
WP_020821996.1|1414715_1415030_-	hypothetical protein	NA	A0A1J0MBV8	Mycobacterium_phage	49.0	1.7e-17
WP_020821997.1|1415088_1415580_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	A0A0G2Y1B6	Acanthamoeba_polyphaga_mimivirus	51.4	3.1e-21
WP_020821998.1|1415576_1417064_-	DNA-3-methyladenine glycosylase 2 family protein	NA	NA	NA	NA	NA
WP_008254855.1|1417277_1418351_+	GGDEF domain-containing protein	NA	A0A2D0W9B6	Bordetella_phage	44.7	1.2e-09
WP_020821999.1|1418364_1419990_-	adenylate/guanylate cyclase domain-containing protein	NA	A0A1B1IWY2	uncultured_Mediterranean_phage	29.9	9.4e-14
>prophage 106
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1431250	1434594	5521023		Bacillus_phage(50.0%)	2	NA	NA
WP_085976483.1|1431250_1433290_-	ATP-dependent DNA helicase	NA	A0A127AW80	Bacillus_phage	27.1	1.4e-51
WP_014711095.1|1433286_1434594_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	35.4	4.1e-44
>prophage 107
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1439872	1447017	5521023		Bacillus_phage(66.67%)	7	NA	NA
WP_020822009.1|1439872_1440484_+	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	A0A0P0A2M4	Ugandan_cassava_brown_streak_virus	32.8	3.1e-10
WP_020822010.1|1440651_1441002_-	DUF3817 domain-containing protein	NA	NA	NA	NA	NA
WP_036454916.1|1440998_1441379_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020822012.1|1441634_1441964_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020822013.1|1441971_1442397_-	DUF393 domain-containing protein	NA	NA	NA	NA	NA
WP_020822014.1|1442668_1445284_+	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	27.3	2.6e-29
WP_020822015.1|1445280_1447017_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	28.3	3.1e-23
>prophage 108
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1450792	1451542	5521023		Trichoplusia_ni_ascovirus(100.0%)	1	NA	NA
WP_008254916.1|1450792_1451542_+	3-oxoacyl-ACP reductase FabG	NA	Q06VL0	Trichoplusia_ni_ascovirus	25.5	2.4e-09
>prophage 109
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1456377	1457907	5521023		Hepacivirus(100.0%)	1	NA	NA
WP_020822020.1|1456377_1457907_-	acyl--CoA ligase	NA	Q75ZG1	Hepacivirus	23.8	3.2e-16
>prophage 110
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1487621	1488629	5521023		Aureococcus_anophage(100.0%)	1	NA	NA
WP_041320870.1|1487621_1488629_-	Rieske (2Fe-2S) protein	NA	A0A076FFT9	Aureococcus_anophage	25.9	3.1e-07
>prophage 111
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1500442	1501600	5521023		Synechococcus_phage(100.0%)	1	NA	NA
WP_008255004.1|1500442_1501600_-	Zn-dependent alcohol dehydrogenase	NA	E3SJ82	Synechococcus_phage	30.0	6.2e-36
>prophage 112
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1511533	1513042	5521023		Staphylococcus_phage(100.0%)	1	NA	NA
WP_020822061.1|1511533_1513042_-	AMP-binding protein	NA	A0A2H4PQM9	Staphylococcus_phage	30.6	7.6e-26
>prophage 113
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1525298	1526864	5521023		Staphylococcus_phage(100.0%)	1	NA	NA
WP_020822072.1|1525298_1526864_+	AMP-binding protein	NA	A0A2H4PQM9	Staphylococcus_phage	24.7	1.6e-18
>prophage 114
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1534131	1534854	5521023		Rhodococcus_phage(100.0%)	1	NA	NA
WP_009957520.1|1534131_1534854_+	DUF1906 domain-containing protein	NA	A0A2P1JXS5	Rhodococcus_phage	48.4	2.5e-51
>prophage 115
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1558483	1562194	5521023	transposase	Vibrio_phage(33.33%)	3	NA	NA
WP_008255097.1|1558483_1559131_-	oligoribonuclease	NA	M4M9I5	Vibrio_phage	42.1	2.7e-25
WP_008255099.1|1559333_1560902_+	DUF853 family protein	NA	A0A248XCZ8	Klebsiella_phage	36.1	1.0e-57
WP_081490066.1|1561030_1562194_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	34.1	7.9e-31
>prophage 116
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1568360	1569950	5521023		Pike_perch_iridovirus(100.0%)	1	NA	NA
WP_008255118.1|1568360_1569950_+	acetyl-CoA carboxylase subunit beta	NA	A0A1B2ITV7	Pike_perch_iridovirus	61.1	3.6e-18
>prophage 117
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1580564	1581812	5521023		Mycobacterium_phage(100.0%)	1	NA	NA
WP_008255134.1|1580564_1581812_+	alpha/beta hydrolase	NA	A0A068F2G2	Mycobacterium_phage	39.8	2.5e-35
>prophage 118
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1590035	1592260	5521023		Propionibacterium_phage(50.0%)	2	NA	NA
WP_008255143.1|1590035_1590506_+	single-stranded DNA-binding protein	NA	A0A1D8ETH0	Propionibacterium_phage	36.7	5.4e-15
WP_008255146.1|1590583_1592260_+	energy-dependent translational throttle protein EttA	NA	A0A2K9L3Z8	Tupanvirus	27.7	7.6e-43
>prophage 119
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1601574	1607707	5521023		Cyanophage(33.33%)	7	NA	NA
WP_036428682.1|1601574_1602225_+	HNH endonuclease	NA	H6WG01	Cyanophage	34.9	1.5e-18
WP_008255162.1|1602292_1602520_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085976436.1|1602461_1602974_+	DUF5130 domain-containing protein	NA	NA	NA	NA	NA
WP_020822092.1|1602974_1605548_-	aminopeptidase N	NA	A0A2K9L1R3	Tupanvirus	32.2	1.0e-46
WP_008255169.1|1605639_1606263_+	DsbA family protein	NA	NA	NA	NA	NA
WP_008255170.1|1606402_1606882_+	ribose-5-phosphate isomerase	NA	NA	NA	NA	NA
WP_008255172.1|1606900_1607707_+	Fpg/Nei family DNA glycosylase	NA	A0A1V0CNR6	Kaumoebavirus	24.9	1.8e-10
>prophage 120
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1611240	1615036	5521023	protease	Agrobacterium_phage(33.33%)	4	NA	NA
WP_008255177.1|1611240_1611831_+|protease	ATP-dependent CLP protease proteolytic subunit ClpP1	protease	A0A223W000	Agrobacterium_phage	47.5	4.7e-40
WP_008255179.1|1611827_1612463_+|protease	ATP-dependent CLP protease proteolytic subunit ClpP2	protease	A0A2H4JEX1	uncultured_Caudovirales_phage	31.8	3.3e-07
WP_162143690.1|1612484_1613396_-	homocysteine S-methyltransferase	NA	NA	NA	NA	NA
WP_008255183.1|1613755_1615036_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	60.2	2.4e-142
>prophage 121
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1621155	1628047	5521023	tRNA	Streptomyces_phage(33.33%)	6	NA	NA
WP_081490074.1|1621155_1621725_+	transglycosylase family protein	NA	A0A1J0GVU2	Streptomyces_phage	79.7	5.4e-25
WP_008255192.1|1621835_1623095_+	saccharopine dehydrogenase NADP-binding domain-containing protein	NA	NA	NA	NA	NA
WP_008255194.1|1623153_1625802_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	39.9	2.3e-142
WP_008255196.1|1625798_1627268_+	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_008255199.1|1627264_1627615_+	DUF4233 domain-containing protein	NA	NA	NA	NA	NA
WP_008255201.1|1627636_1628047_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	50.0	3.7e-28
>prophage 122
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1633618	1634722	5521023		Streptococcus_phage(100.0%)	1	NA	NA
WP_008255219.1|1633618_1634722_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	38.8	5.7e-55
>prophage 123
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1646108	1647392	5521023		Streptococcus_phage(100.0%)	1	NA	NA
WP_020822099.1|1646108_1647392_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	50.3	8.5e-95
>prophage 124
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1659783	1660911	5521023		Mycobacterium_phage(100.0%)	1	NA	NA
WP_020822102.1|1659783_1660911_-	PE-PPE domain-containing protein	NA	A0A222ZKN7	Mycobacterium_phage	35.5	1.4e-21
>prophage 125
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1690195	1692067	5521023		Tupanvirus(100.0%)	1	NA	NA
WP_072501241.1|1690195_1692067_+	elongation factor 4	NA	A0A2K9L6L3	Tupanvirus	40.5	3.1e-21
>prophage 126
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1698793	1699876	5521023		Bacillus_virus(100.0%)	1	NA	NA
WP_008255301.1|1698793_1699876_+	sulfate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.4	9.9e-28
>prophage 127
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1711998	1714912	5521023		Mycobacterium_phage(50.0%)	2	NA	NA
WP_020822109.1|1711998_1713003_-	alpha/beta hydrolase	NA	A0A068F2G2	Mycobacterium_phage	39.5	4.9e-05
WP_008255327.1|1713748_1714912_-	NDMA-dependent alcohol dehydrogenase	NA	E3SJ82	Synechococcus_phage	28.3	2.1e-31
>prophage 128
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1767381	1768845	5521023		Hepacivirus(100.0%)	1	NA	NA
WP_020822146.1|1767381_1768845_-	acyl--CoA ligase	NA	Q75ZG1	Hepacivirus	25.0	4.0e-24
>prophage 129
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1780835	1781915	5521023		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
WP_008255445.1|1780835_1781915_+	hydroxyacid dehydrogenase	NA	M1HUT5	Acanthocystis_turfacea_Chlorella_virus	31.1	5.1e-24
>prophage 130
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1808098	1808716	5521023		Macacine_betaherpesvirus(100.0%)	1	NA	NA
WP_051197720.1|1808098_1808716_-	hypothetical protein	NA	A0A2I6B2H4	Macacine_betaherpesvirus	44.4	1.6e-30
>prophage 131
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1811882	1812653	5521023		Niemeyer_virus(100.0%)	1	NA	NA
WP_009976204.1|1811882_1812653_-	slipin family protein	NA	A0A0U2UF06	Niemeyer_virus	28.3	1.8e-23
>prophage 132
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1831641	1838085	5521023		Escherichia_phage(33.33%)	3	NA	NA
WP_020822191.1|1831641_1832709_+	3-deoxy-7-phosphoheptulonate synthase	NA	A0A060BHG3	Escherichia_phage	47.8	3.6e-83
WP_020822192.1|1832848_1834486_-	AMP-binding protein	NA	A0A1V0SBX8	Catovirus	37.2	3.5e-08
WP_020822193.1|1834581_1838085_+	non-ribosomal peptide synthetase	NA	A0A2K9KZV5	Tupanvirus	22.6	1.3e-41
>prophage 133
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1843237	1854249	5521023		Tupanvirus(100.0%)	2	NA	NA
WP_020822197.1|1843237_1849813_+	non-ribosomal peptide synthetase	NA	A0A2K9KZV5	Tupanvirus	24.4	2.4e-124
WP_008255569.1|1849809_1854249_+	non-ribosomal peptide synthetase	NA	A0A2K9KZV5	Tupanvirus	23.3	3.2e-48
>prophage 134
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1860417	1863512	5521023		Ectocarpus_siliculosus_virus(50.0%)	3	NA	NA
WP_008255583.1|1860417_1861566_+	molecular chaperone DnaJ	NA	Q8QNB4	Ectocarpus_siliculosus_virus	30.4	5.6e-29
WP_008255584.1|1861579_1862341_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_036428749.1|1862453_1863512_+	PhoH family protein	NA	W8D063	Erwinia_phage	44.8	6.7e-45
>prophage 135
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1871639	1875333	5521023	tRNA	Flavobacterium_phage(50.0%)	5	NA	NA
WP_008255602.1|1871639_1872509_+	decaprenyl diphosphate synthase	NA	R9W0U9	Flavobacterium_phage	40.5	7.0e-16
WP_008255604.1|1872508_1872937_+	hypothetical protein	NA	NA	NA	NA	NA
WP_008255605.1|1872940_1873336_-	transcriptional repressor	NA	NA	NA	NA	NA
WP_008255606.1|1873332_1873734_-	metalloregulator ArsR/SmtB family transcription factor	NA	NA	NA	NA	NA
WP_008255621.1|1873941_1875333_+|tRNA	glycine--tRNA ligase	tRNA	A0A2I2L3K8	Orpheovirus	29.9	1.7e-48
>prophage 136
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1881769	1883722	5521023		Helicobacter_phage(100.0%)	1	NA	NA
WP_008255631.1|1881769_1883722_+	DNA primase	NA	A0A1S5REW9	Helicobacter_phage	31.4	6.8e-35
>prophage 137
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1888677	1889610	5521023		Streptococcus_phage(100.0%)	1	NA	NA
WP_008255646.1|1888677_1889610_-	cysteine synthase A	NA	A0A1X9I5K7	Streptococcus_phage	53.4	2.9e-84
>prophage 138
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1897922	1905010	5521023		Tupanvirus(33.33%)	5	NA	NA
WP_014379818.1|1897922_1899875_-	acyl-CoA dehydrogenase family protein	NA	A0A2K9L6M4	Tupanvirus	30.2	1.1e-53
WP_014941695.1|1899924_1902090_-	ATP-binding cassette domain-containing protein	NA	A0A2R8FG22	Brazilian_cedratvirus	31.0	4.9e-18
WP_014382315.1|1902096_1902372_+	hypothetical protein	NA	NA	NA	NA	NA
WP_008255657.1|1902375_1902864_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_008255658.1|1903045_1905010_+	ATP-binding cassette domain-containing protein	NA	A0A2I4R674	Erysipelothrix_phage	27.4	9.6e-05
>prophage 139
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1916237	1921323	5521023	transposase	Leptospira_phage(33.33%)	3	NA	NA
WP_036429757.1|1916237_1917425_+|transposase	IS481 family transposase	transposase	S5WIU1	Leptospira_phage	30.9	4.4e-13
WP_036429187.1|1917513_1918665_-	alpha/beta hydrolase	NA	A0A1C9LYC8	Mycobacterium_phage	41.9	5.2e-43
WP_008255677.1|1918776_1921323_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	34.2	2.0e-151
>prophage 140
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1946591	1950495	5521023	transposase	Staphylococcus_phage(50.0%)	3	NA	NA
WP_081490066.1|1946591_1947755_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	34.1	7.9e-31
WP_008255721.1|1947824_1948445_-	TIGR03085 family protein	NA	NA	NA	NA	NA
WP_008255722.1|1948560_1950495_+	molecular chaperone HtpG	NA	A0A1V0SAD6	Catovirus	34.3	1.0e-107
>prophage 141
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1984803	1985982	5521023		Escherichia_phage(100.0%)	1	NA	NA
WP_020822228.1|1984803_1985982_-	AAA family ATPase	NA	A0A077SLJ9	Escherichia_phage	36.4	5.0e-57
>prophage 142
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	1993795	1994788	5521023		Orpheovirus(100.0%)	1	NA	NA
WP_020822235.1|1993795_1994788_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	47.6	5.3e-68
>prophage 143
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2000415	2001897	5521023		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_020822240.1|2000415_2001897_+	serine/threonine protein kinase	NA	M1HUJ3	Paramecium_bursaria_Chlorella_virus	28.1	8.0e-12
>prophage 144
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2021304	2022946	5521023	transposase	uncultured_Mediterranean_phage(50.0%)	2	NA	NA
WP_020822251.1|2021304_2021505_-	helix-turn-helix domain-containing protein	NA	A0A1B1IUF9	uncultured_Mediterranean_phage	55.4	2.3e-15
WP_041320923.1|2021668_2022946_-|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	47.2	1.6e-101
>prophage 145
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2039998	2041084	5521023		Synechococcus_phage(100.0%)	1	NA	NA
WP_041320931.1|2039998_2041084_-	S-(hydroxymethyl)mycothiol dehydrogenase	NA	E3SJ82	Synechococcus_phage	29.5	5.6e-31
>prophage 146
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2070777	2073763	5521023		Agrobacterium_phage(50.0%)	4	NA	NA
WP_008255937.1|2070777_2071917_+	bifunctional RNase H/acid phosphatase	NA	A0A2L0V0T1	Agrobacterium_phage	29.9	1.1e-05
WP_014379932.1|2071905_2072310_-	VOC family protein	NA	NA	NA	NA	NA
WP_036429208.1|2072263_2073106_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_020822285.1|2073190_2073763_-	helix-turn-helix transcriptional regulator	NA	F8TVE5	EBPR_siphovirus	46.5	9.6e-06
>prophage 147
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2099826	2108553	5521023	integrase	Mycobacterium_phage(50.0%)	9	2094560:2094573	2111927:2111940
2094560:2094573	attL	GCCGTTGAAGTCGG	NA	NA	NA	NA
WP_020822298.1|2099826_2102601_-	transglycosylase family protein	NA	G8I4C9	Mycobacterium_phage	49.4	1.3e-42
WP_036428789.1|2102725_2102911_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_008256008.1|2103461_2104832_-	hypothetical protein	NA	K4HZY1	Acidithiobacillus_phage	39.2	1.6e-70
WP_008256010.1|2104828_2105830_-	bifunctional DNA primase/polymerase	NA	S5WCR8	Mycobacterium_phage	41.6	1.8e-23
WP_008256013.1|2105826_2106066_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008256014.1|2106160_2106469_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008256016.1|2106465_2106675_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_008256018.1|2106773_2107361_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_008256019.1|2107344_2108553_+|integrase	site-specific integrase	integrase	A0A1W6JRD7	Corynebacterium_phage	29.2	3.6e-26
2111927:2111940	attR	GCCGTTGAAGTCGG	NA	NA	NA	NA
>prophage 148
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2120387	2121935	5521023		Mycoplasma_phage(100.0%)	1	NA	NA
WP_008256040.1|2120387_2121935_-	leucyl aminopeptidase	NA	Q6GYZ8	Mycoplasma_phage	34.1	1.6e-31
>prophage 149
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2127601	2133144	5521023		Streptococcus_phage(50.0%)	5	NA	NA
WP_020822306.1|2127601_2128678_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	29.7	5.1e-16
WP_008256050.1|2128757_2129114_+	iron-sulfur cluster assembly accessory protein	NA	NA	NA	NA	NA
WP_036455197.1|2129193_2129880_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020822308.1|2130063_2131038_+	carbohydrate kinase family protein	NA	NA	NA	NA	NA
WP_020822309.1|2131185_2133144_-	asparagine synthase (glutamine-hydrolyzing)	NA	I3UKG6	Ostreococcus_lucimarinus_virus	28.3	1.9e-21
>prophage 150
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2142263	2149772	5521023		Clostridium_phage(33.33%)	6	NA	NA
WP_036455198.1|2142263_2144195_-	DEDD exonuclease domain-containing protein	NA	A0A0K2SUJ2	Clostridium_phage	31.4	7.5e-10
WP_069953808.1|2144335_2144557_+	hypothetical protein	NA	NA	NA	NA	NA
WP_036455199.1|2144736_2145888_+	C40 family peptidase	NA	A0A1J0GW44	Streptomyces_phage	41.4	1.1e-16
WP_020822317.1|2145946_2146762_+	DUF4157 domain-containing protein	NA	NA	NA	NA	NA
WP_008256086.1|2146817_2147957_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_008256088.1|2147969_2149772_-	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	27.2	8.1e-51
>prophage 151
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2155602	2158856	5521023		Mycobacterium_phage(50.0%)	3	NA	NA
WP_008256110.1|2155602_2156097_+	polyadenylate-specific 3'-exoribonuclease AS	NA	A0A249XQ39	Mycobacterium_phage	43.2	2.9e-27
WP_020822321.1|2156171_2157560_+	3-deoxy-7-phosphoheptulonate synthase class II	NA	NA	NA	NA	NA
WP_020822322.1|2157638_2158856_-	serine/threonine protein kinase	NA	S4W2F5	Pandoravirus	35.4	3.6e-18
>prophage 152
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2189127	2260043	5521023	holin,transposase,integrase	Mycobacterium_phage(100.0%)	53	2239343:2239356	2263384:2263397
WP_008256156.1|2189127_2189466_+|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_008256158.1|2189469_2190144_-	phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_020822343.1|2190741_2192262_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_081656329.1|2192878_2193424_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008256163.1|2193496_2193706_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014711465.1|2193858_2195337_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014711466.1|2195333_2195912_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008256168.1|2195911_2196397_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_008256169.1|2196791_2197226_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
WP_008256170.1|2197229_2197478_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_014711800.1|2198024_2198837_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_041320942.1|2198833_2200387_-|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
WP_036428816.1|2200809_2201388_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_008256175.1|2201384_2202521_-	alcohol dehydrogenase catalytic domain-containing protein	NA	NA	NA	NA	NA
WP_008256177.1|2202517_2203987_-	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
WP_073916456.1|2204181_2204745_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_008256182.1|2204798_2205236_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_008256185.1|2205235_2206147_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_020822352.1|2206239_2206818_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_036455212.1|2209096_2209876_-|transposase	IS256 family transposase	transposase	NA	NA	NA	NA
WP_020822357.1|2209827_2210436_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_036429555.1|2213774_2214860_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_014711472.1|2214887_2215763_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_079628783.1|2219062_2219869_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_074325745.1|2219902_2220808_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_074363640.1|2220989_2221289_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_020822362.1|2221788_2222088_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020822364.1|2222840_2223140_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_014711480.1|2224371_2225079_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_109539071.1|2225401_2225656_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014711469.1|2225671_2226280_-|transposase	transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	31.6	2.5e-12
WP_165645512.1|2231101_2231944_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_014711485.1|2231990_2233556_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_020822371.1|2233861_2234446_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020822372.1|2234524_2235016_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014711488.1|2235006_2236155_-|transposase	IS256 family transposase	transposase	NA	NA	NA	NA
WP_014711489.1|2236569_2237580_-	alpha/beta hydrolase fold domain-containing protein	NA	NA	NA	NA	NA
WP_131820920.1|2239131_2239533_+	hypothetical protein	NA	NA	NA	NA	NA
2239343:2239356	attL	CGGTGCTGAGCGTC	NA	NA	NA	NA
WP_014711494.1|2239529_2240324_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_036455216.1|2240326_2241196_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_036455630.1|2241202_2242423_+	MCE family protein	NA	NA	NA	NA	NA
WP_014711497.1|2242419_2243463_+	MCE family protein	NA	NA	NA	NA	NA
WP_081490094.1|2243459_2245025_+	MCE family protein	NA	NA	NA	NA	NA
WP_020822379.1|2245021_2246536_+	virulence factor Mce family protein	NA	NA	NA	NA	NA
WP_036455218.1|2246538_2247666_+	virulence factor Mce family protein	NA	NA	NA	NA	NA
WP_014711501.1|2247671_2249216_+	MCE family protein	NA	NA	NA	NA	NA
WP_014711087.1|2249299_2250769_-|transposase	IS1634 family transposase	transposase	NA	NA	NA	NA
WP_081490095.1|2251660_2252269_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_020822383.1|2252452_2252857_+	mmpS4 protein	NA	NA	NA	NA	NA
WP_020822384.1|2252853_2255751_+	MMPL family transporter	NA	NA	NA	NA	NA
WP_014711502.1|2256087_2257740_+|transposase	IS1634 family transposase	transposase	NA	NA	NA	NA
WP_050989381.1|2257959_2258586_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020822385.1|2258633_2260043_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
2263384:2263397	attR	GACGCTCAGCACCG	NA	NA	NA	NA
>prophage 153
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2273211	2274831	5521023		Staphylococcus_phage(100.0%)	1	NA	NA
WP_020822392.1|2273211_2274831_+	fatty acid--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	22.5	2.7e-21
>prophage 154
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2292600	2293836	5521023		Catovirus(100.0%)	1	NA	NA
WP_014711525.1|2292600_2293836_+	cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase	NA	A0A1V0SAQ2	Catovirus	25.1	2.1e-26
>prophage 155
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2318689	2320198	5521023		Mycobacterium_phage(100.0%)	1	NA	NA
WP_085976443.1|2318689_2320198_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	32.4	1.5e-37
>prophage 156
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2335724	2339519	5521023		Dickeya_phage(100.0%)	1	NA	NA
WP_020822415.1|2335724_2339519_+	methionine synthase	NA	A0A140XBC7	Dickeya_phage	56.5	2.6e-14
>prophage 157
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2352993	2354364	5521023		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_014711538.1|2352993_2354364_+	FAD-containing oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	34.1	1.2e-62
>prophage 158
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2357553	2359383	5521023		Tupanvirus(100.0%)	1	NA	NA
WP_008256304.1|2357553_2359383_+	proteasome ATPase	NA	A0A2K9L596	Tupanvirus	35.4	2.7e-33
>prophage 159
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2370497	2375069	5521023		Acanthocystis_turfacea_Chlorella_virus(50.0%)	3	NA	NA
WP_008256325.1|2370497_2373278_+	RNA helicase	NA	M1ILW8	Acanthocystis_turfacea_Chlorella_virus	34.9	5.4e-70
WP_008256331.1|2373343_2374105_+	DUF4333 domain-containing protein	NA	NA	NA	NA	NA
WP_008256332.1|2374112_2375069_-	5'-3' exonuclease	NA	A0A2P1JXG8	Rhodococcus_phage	35.5	4.5e-24
>prophage 160
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2389111	2389867	5521023		Planktothrix_phage(100.0%)	1	NA	NA
WP_008256363.1|2389111_2389867_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.5	2.7e-24
>prophage 161
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2403240	2417811	5521023		Sulfolobus_monocaudavirus(50.0%)	4	NA	NA
WP_014711552.1|2403240_2404035_+	polyprenol monophosphomannose synthase	NA	A0A0N7A8R9	Sulfolobus_monocaudavirus	38.7	7.5e-25
WP_007770897.1|2404044_2404380_-	RNA polymerase-binding protein RbpA	NA	NA	NA	NA	NA
WP_162143692.1|2404682_2404904_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014711554.1|2405265_2417811_+	type I polyketide synthase	NA	D0R7J2	Paenibacillus_phage	31.4	7.5e-26
>prophage 162
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2433073	2433892	5521023		Bacillus_phage(100.0%)	1	NA	NA
WP_036455750.1|2433073_2433892_+	mycofactocin-coupled SDR family oxidoreductase	NA	W8CYX9	Bacillus_phage	42.9	1.6e-09
>prophage 163
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2437432	2438950	5521023		Mollivirus(100.0%)	1	NA	NA
WP_014711567.1|2437432_2438950_+	carboxylesterase/lipase family protein	NA	A0A0M4JT58	Mollivirus	31.6	3.1e-27
>prophage 164
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2443698	2444259	5521023		Klosneuvirus(100.0%)	1	NA	NA
WP_014711572.1|2443698_2444259_+	pyrazinamidase PncA	NA	A0A1V0SL12	Klosneuvirus	23.7	1.4e-06
>prophage 165
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2449692	2451795	5521023		Planktothrix_phage(50.0%)	2	NA	NA
WP_020822448.1|2449692_2450763_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	30.3	2.3e-21
WP_020822449.1|2450829_2451795_+	patatin-like phospholipase family protein	NA	A0A0H3TN97	Faustovirus	26.7	2.4e-17
>prophage 166
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2471095	2471878	5521023		Trichoplusia_ni_ascovirus(100.0%)	1	NA	NA
WP_008256510.1|2471095_2471878_+	glucose 1-dehydrogenase	NA	Q06VL0	Trichoplusia_ni_ascovirus	29.7	4.1e-15
>prophage 167
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2482123	2485106	5521023		Streptococcus_phage(50.0%)	4	NA	NA
WP_020822473.1|2482123_2482816_-	HTH domain-containing protein	NA	A0A1B0RXM1	Streptococcus_phage	25.7	1.4e-06
WP_020822474.1|2482837_2483242_-	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_020822475.1|2484068_2484251_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020822476.1|2484278_2485106_+	DUF1906 domain-containing protein	NA	A0A1B3B0M0	Gordonia_phage	46.8	1.8e-53
>prophage 168
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2503795	2504530	5521023		Bacillus_virus(100.0%)	1	NA	NA
WP_036455761.1|2503795_2504530_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.7	1.1e-22
>prophage 169
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2513816	2514578	5521023		Trichoplusia_ni_ascovirus(100.0%)	1	NA	NA
WP_020822506.1|2513816_2514578_-	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	31.8	1.0e-15
>prophage 170
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2519757	2521257	5521023		Cyanophage(100.0%)	1	NA	NA
WP_020822512.1|2519757_2521257_-	glucose-6-phosphate dehydrogenase	NA	H6WFS4	Cyanophage	36.2	1.1e-72
>prophage 171
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2524264	2528179	5521023		Klosneuvirus(100.0%)	1	NA	NA
WP_020822515.1|2524264_2528179_-	ATP-dependent RNA helicase HrpA	NA	A0A1V0SIV3	Klosneuvirus	24.7	7.2e-36
>prophage 172
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2548006	2548804	5521023		Gordonia_phage(100.0%)	1	NA	NA
WP_020822532.1|2548006_2548804_-	DUF1906 domain-containing protein	NA	A0A2D1GEF2	Gordonia_phage	48.9	8.3e-56
>prophage 173
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2573096	2575919	5521023		Trichoplusia_ni_ascovirus(50.0%)	3	NA	NA
WP_020822552.1|2573096_2573867_+	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	32.7	8.1e-16
WP_020822553.1|2573874_2574552_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020822554.1|2574686_2575919_-	serine hydrolase	NA	A0A2K9L1U3	Tupanvirus	30.6	7.1e-30
>prophage 174
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2596012	2599087	5521023		Burkholderia_virus(33.33%)	3	NA	NA
WP_008256823.1|2596012_2597260_+	MFS transporter	NA	Q6JIH2	Burkholderia_virus	26.4	1.4e-14
WP_020822568.1|2597262_2598558_-	competence/damage-inducible protein A	NA	B5TK85	Pseudomonas_phage	42.0	1.4e-15
WP_008256826.1|2598568_2599087_+	macro domain-containing protein	NA	A0A0K1L687	Scale_drop_disease_virus	31.9	3.8e-09
>prophage 175
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2607750	2613332	5521023		Macacine_betaherpesvirus(66.67%)	6	NA	NA
WP_008256838.1|2607750_2608764_+	alcohol dehydrogenase catalytic domain-containing protein	NA	A0A0G2Y405	Acanthamoeba_polyphaga_mimivirus	36.3	4.7e-32
WP_036428884.1|2608776_2609337_+	YceI family protein	NA	NA	NA	NA	NA
WP_008256841.1|2609356_2610469_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009952996.1|2611122_2612115_+	esterase family protein	NA	A0A2I6B0H1	Macacine_betaherpesvirus	86.1	4.9e-167
WP_008256845.1|2612258_2612789_+	chorismate mutase	NA	NA	NA	NA	NA
WP_020822571.1|2612894_2613332_+	transglycosylase family protein	NA	A0A2I6B0Z0	Macacine_betaherpesvirus	66.9	1.0e-47
>prophage 176
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2618444	2619926	5521023		Bodo_saltans_virus(100.0%)	1	NA	NA
WP_036455775.1|2618444_2619926_+	serine/threonine protein kinase	NA	A0A2H4UVE2	Bodo_saltans_virus	27.7	1.6e-15
>prophage 177
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2633877	2638009	5521023		Bodo_saltans_virus(50.0%)	3	NA	NA
WP_036428894.1|2633877_2634333_-	DUF1810 domain-containing protein	NA	A0A2H4UVK5	Bodo_saltans_virus	41.0	1.9e-17
WP_020822579.1|2634334_2635594_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_020822580.1|2635675_2638009_+	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	40.5	2.8e-144
>prophage 178
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2656470	2657574	5521023		Planktothrix_phage(100.0%)	1	NA	NA
WP_008256926.1|2656470_2657574_-	sulfate/molybdate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.7	3.3e-18
>prophage 179
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2665416	2668363	5521023		Ostreococcus_lucimarinus_virus(50.0%)	2	NA	NA
WP_036455778.1|2665416_2666886_+	NADP-dependent phosphogluconate dehydrogenase	NA	M4QQM4	Ostreococcus_lucimarinus_virus	25.7	3.7e-33
WP_008256949.1|2666926_2668363_+	GuaB1 family IMP dehydrogenase-related protein	NA	A0A1V0SHK8	Klosneuvirus	29.3	2.4e-45
>prophage 180
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2682453	2685279	5521023		Prochlorococcus_phage(100.0%)	1	NA	NA
WP_020822597.1|2682453_2685279_-	aminomethyl-transferring glycine dehydrogenase	NA	M4QFZ1	Prochlorococcus_phage	51.2	7.5e-261
>prophage 181
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2695987	2697907	5521023		Bacillus_virus(100.0%)	1	NA	NA
WP_020822603.1|2695987_2697907_+	ABC transporter ATP-binding protein/permease	NA	G3M9Y6	Bacillus_virus	27.9	2.0e-07
>prophage 182
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2703106	2703823	5521023		Bacillus_virus(100.0%)	1	NA	NA
WP_008257013.1|2703106_2703823_-	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	36.7	2.5e-11
>prophage 183
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2713488	2718345	5521023	protease	Mycobacterium_phage(100.0%)	3	NA	NA
WP_008257033.1|2713488_2715318_-	type VII secretion system ESX-5 AAA family ATPase EccA5	NA	V5UQM2	Mycobacterium_phage	32.3	3.7e-67
WP_014380194.1|2715314_2716514_-	type VII secretion protein EccE	NA	NA	NA	NA	NA
WP_020822615.1|2716533_2718345_-|protease	type VII secretion-associated serine protease mycosin	protease	V5UPA7	Mycobacterium_phage	35.5	2.6e-73
>prophage 184
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2730721	2734885	5521023		Mycobacterium_phage(100.0%)	1	NA	NA
WP_020822624.1|2730721_2734885_-	type VII secretion protein EccC	NA	V5UPA0	Mycobacterium_phage	26.2	1.2e-113
>prophage 185
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2761787	2763152	5521023		Chrysochromulina_ericina_virus(100.0%)	1	NA	NA
WP_008257112.1|2761787_2763152_+	DEAD/DEAH box helicase	NA	A0A0N9Q9J4	Chrysochromulina_ericina_virus	28.7	1.7e-37
>prophage 186
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2768922	2769732	5521023		Bacillus_phage(100.0%)	1	NA	NA
WP_036428911.1|2768922_2769732_+	SigB/SigF/SigG family RNA polymerase sigma factor	NA	A0A0E3T5M9	Bacillus_phage	30.6	1.8e-18
>prophage 187
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2798751	2800365	5521023		Catovirus(100.0%)	1	NA	NA
WP_020822665.1|2798751_2800365_-	acyl--CoA ligase	NA	A0A1V0SBX8	Catovirus	28.2	1.2e-08
>prophage 188
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2814804	2817504	5521023		Cedratvirus(100.0%)	1	NA	NA
WP_157884944.1|2814804_2817504_-	ATP-binding cassette domain-containing protein	NA	A0A2R8FFL6	Cedratvirus	34.7	8.0e-26
>prophage 189
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2835247	2836171	5521023		Acanthamoeba_polyphaga_lentillevirus(100.0%)	1	NA	NA
WP_020822670.1|2835247_2836171_+	alpha/beta hydrolase	NA	J3IZC7	Acanthamoeba_polyphaga_lentillevirus	31.4	8.4e-36
>prophage 190
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2864476	2869531	5521023	transposase	Microcystis_virus(50.0%)	5	NA	NA
WP_008257291.1|2864476_2865856_+|transposase	transposase	transposase	A0A7P9	Microcystis_virus	29.8	8.7e-29
WP_008257293.1|2865895_2866393_+	flavin reductase family protein	NA	NA	NA	NA	NA
WP_008257295.1|2866395_2867121_+	pyrimidine reductase family protein	NA	NA	NA	NA	NA
WP_008257297.1|2867230_2867572_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020822696.1|2867722_2869531_+	protein kinase	NA	M1HKB5	Acanthocystis_turfacea_Chlorella_virus	32.6	4.5e-17
>prophage 191
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2872874	2874680	5521023		Tupanvirus(100.0%)	1	NA	NA
WP_041320995.1|2872874_2874680_-	N-acetylglutaminylglutamine amidotransferase	NA	A0A2K9L187	Tupanvirus	26.2	6.3e-27
>prophage 192
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2917849	2920195	5521023		Streptococcus_phage(100.0%)	1	NA	NA
WP_014711794.1|2917849_2920195_-	copper-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	34.8	1.0e-93
>prophage 193
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2934033	2940287	5521023		Streptococcus_phage(100.0%)	5	NA	NA
WP_020822720.1|2934033_2936316_+	manganese-exporting P-type ATPase CtpC	NA	E4ZFI9	Streptococcus_phage	34.4	1.0e-82
WP_033712914.1|2936321_2936924_+	isoprenylcysteine carboxylmethyltransferase family protein	NA	NA	NA	NA	NA
WP_020822721.1|2937187_2937547_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_014711808.1|2937597_2937879_+	DUF1490 family protein	NA	NA	NA	NA	NA
WP_014711809.1|2937965_2940287_+	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	35.0	3.0e-82
>prophage 194
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2947014	2949692	5521023		Streptococcus_phage(50.0%)	3	NA	NA
WP_014711813.1|2947014_2947671_+	methyltransferase domain-containing protein	NA	A0A1X9I6N4	Streptococcus_phage	29.3	2.8e-09
WP_020822727.1|2948036_2948435_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014711815.1|2948546_2949692_+	PLP-dependent cysteine synthase family protein	NA	A0A1W6JHY1	Lactococcus_phage	32.1	3.6e-36
>prophage 195
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2964563	2974170	5521023		Tupanvirus(100.0%)	2	NA	NA
WP_014711832.1|2964563_2969120_-	non-ribosomal peptide synthetase	NA	A0A2K9L3I8	Tupanvirus	23.2	1.4e-30
WP_014711833.1|2969139_2974170_-	non-ribosomal peptide synthetase	NA	A0A2K9KZV5	Tupanvirus	26.6	1.9e-97
>prophage 196
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2980885	2983141	5521023		uncultured_virus(100.0%)	1	NA	NA
WP_014711839.1|2980885_2983141_+	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	37.8	9.4e-105
>prophage 197
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2987373	2988471	5521023		Lactococcus_phage(100.0%)	1	NA	NA
WP_020822742.1|2987373_2988471_+	PLP-dependent cysteine synthase family protein	NA	A0A1W6JHY1	Lactococcus_phage	33.4	1.4e-34
>prophage 198
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	2995817	2996669	5521023		Enterobacteria_phage(100.0%)	1	NA	NA
WP_014711849.1|2995817_2996669_+	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	36.9	1.1e-37
>prophage 199
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3005089	3012032	5521023		uncultured_Mediterranean_phage(25.0%)	7	NA	NA
WP_036456146.1|3005089_3005770_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	27.0	2.7e-07
WP_014942273.1|3005994_3006813_-	segregation/condensation protein A	NA	NA	NA	NA	NA
WP_008257550.1|3006809_3007673_-	ParA family protein	NA	Q8JL10	Natrialba_phage	36.9	1.5e-23
WP_020822752.1|3007907_3008657_+	O-methyltransferase	NA	NA	NA	NA	NA
WP_014380299.1|3008726_3009668_-	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	25.2	1.5e-19
WP_020822753.1|3009664_3010288_-	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_008257563.1|3010280_3012032_-	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	45.8	6.1e-128
>prophage 200
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3020575	3024798	5521023	tRNA	Cronobacter_phage(33.33%)	4	NA	NA
WP_020822759.1|3020575_3021847_-|tRNA	tyrosine--tRNA ligase	tRNA	K4F5T3	Cronobacter_phage	37.5	1.0e-63
WP_020822760.1|3021940_3022585_-	DNA-3-methyladenine glycosylase	NA	NA	NA	NA	NA
WP_041321004.1|3022681_3023962_+	ammonium transporter	NA	H8ZJB2	Ostreococcus_tauri_virus	31.0	2.5e-38
WP_020822762.1|3024033_3024798_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.8	7.7e-19
>prophage 201
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3035659	3039394	5521023		Oenococcus_phage(50.0%)	3	NA	NA
WP_051197828.1|3035659_3036778_+	mandelate racemase	NA	Q6A202	Oenococcus_phage	24.8	9.6e-18
WP_041321008.1|3036854_3037556_+	ANTAR domain-containing protein	NA	NA	NA	NA	NA
WP_020822771.1|3037579_3039394_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2I4R674	Erysipelothrix_phage	25.1	1.6e-38
>prophage 202
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3045138	3057904	5521023		Paenibacillus_phage(100.0%)	2	NA	NA
WP_020822775.1|3045138_3051534_-	type I polyketide synthase	NA	D0R7J2	Paenibacillus_phage	29.8	9.7e-22
WP_020822776.1|3051514_3057904_-	type I polyketide synthase	NA	D0R7J2	Paenibacillus_phage	30.7	3.2e-25
>prophage 203
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3063342	3064536	5521023		Mycobacterium_phage(100.0%)	1	NA	NA
WP_020822777.1|3063342_3064536_-	acetylornithine transaminase	NA	A0A249XSK4	Mycobacterium_phage	26.7	1.6e-15
>prophage 204
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3070197	3071241	5521023	tRNA	Orpheovirus(100.0%)	1	NA	NA
WP_020822781.1|3070197_3071241_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2I2L4E3	Orpheovirus	37.1	2.5e-28
>prophage 205
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3075935	3080355	5521023	tRNA	Vibrio_phage(50.0%)	2	NA	NA
WP_072501342.1|3075935_3076541_-	translation initiation factor IF-3	NA	A0A2I7S9Q1	Vibrio_phage	34.5	1.6e-11
WP_086426989.1|3076794_3080355_+|tRNA	bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX	tRNA	A0A1V0SIS0	Klosneuvirus	34.8	7.9e-74
>prophage 206
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3086484	3087855	5521023		Pandoravirus(100.0%)	1	NA	NA
WP_008257643.1|3086484_3087855_+	cytochrome P450	NA	S4VQU1	Pandoravirus	23.0	2.2e-16
>prophage 207
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3091985	3095736	5521023		uncultured_Mediterranean_phage(50.0%)	2	NA	NA
WP_020822789.1|3091985_3094904_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	53.2	2.0e-293
WP_020188595.1|3095037_3095736_+	MBL fold metallo-hydrolase	NA	A0A221J762	Mycobacterium_phage	69.8	9.9e-13
>prophage 208
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3103118	3112590	5521023		Bodo_saltans_virus(25.0%)	8	NA	NA
WP_008257662.1|3103118_3105158_-	serine/threonine protein kinase	NA	A0A2H4UVE2	Bodo_saltans_virus	27.7	1.1e-16
WP_081614497.1|3105336_3107910_+	FHA domain-containing protein	NA	A0A2R8FG22	Brazilian_cedratvirus	32.8	3.0e-30
WP_008257664.1|3108004_3108445_+	DUF402 domain-containing protein	NA	NA	NA	NA	NA
WP_020822794.1|3108456_3109170_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
WP_020822795.1|3109276_3109918_+	chemotaxis protein CheB	NA	NA	NA	NA	NA
WP_020822796.1|3109923_3110922_+	DNA polymerase LigD ligase subunit	NA	A0A291AUP8	Sinorhizobium_phage	34.9	9.4e-41
WP_020822797.1|3110921_3111812_+	DNA ligase-like protein	NA	NA	NA	NA	NA
WP_020822798.1|3111804_3112590_+	Fpg/Nei family DNA glycosylase	NA	A0A1V0CNR6	Kaumoebavirus	26.2	1.5e-09
>prophage 209
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3118164	3123445	5521023		Listeria_phage(50.0%)	4	NA	NA
WP_162143695.1|3118164_3120825_-	DNA polymerase I	NA	A0A060AFQ3	Listeria_phage	30.9	1.1e-43
WP_020822805.1|3120989_3121430_+	Zn-ribbon domain-containing OB-fold protein	NA	NA	NA	NA	NA
WP_036456150.1|3121432_3122635_+	lipid-transfer protein	NA	NA	NA	NA	NA
WP_008257686.1|3122830_3123445_-	ANTAR domain-containing response regulator	NA	Q6XM27	Feldmannia_irregularis_virus	31.7	3.9e-05
>prophage 210
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3140977	3141796	5521023		Acinetobacter_phage(100.0%)	1	NA	NA
WP_008257758.1|3140977_3141796_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	36.9	3.6e-30
>prophage 211
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3149824	3150958	5521023		Faustovirus(100.0%)	1	NA	NA
WP_008257769.1|3149824_3150958_-	histidinol-phosphate transaminase	NA	A0A1X7QHI1	Faustovirus	29.6	6.3e-17
>prophage 212
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3171765	3176981	5521023		Klosneuvirus(33.33%)	4	NA	NA
WP_020822835.1|3171765_3173070_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	27.8	6.8e-15
WP_008257820.1|3173132_3173570_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020822836.1|3173901_3174693_+	NlpC/P60 family peptidoglycan-binding protein RipD	NA	A0A1J0GW44	Streptomyces_phage	34.9	4.1e-07
WP_020822837.1|3174794_3176981_+	acyltransferase	NA	A0A166XZF2	Gordonia_phage	29.0	3.5e-56
>prophage 213
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3192281	3199574	5521023		Catovirus(50.0%)	5	NA	NA
WP_020822848.1|3192281_3194108_-	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	24.3	4.1e-42
WP_020822849.1|3194208_3195081_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_020822850.1|3195059_3195449_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_036456155.1|3195509_3195971_+	PPOX class F420-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_020822852.1|3196040_3199574_-	DNA polymerase III subunit alpha	NA	Q8W6C3	Saccharomonospora_phage	60.4	0.0e+00
>prophage 214
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3207832	3257072	5521023	tRNA	Tupanvirus(75.0%)	7	NA	NA
WP_008257870.1|3207832_3210982_-|tRNA	isoleucine--tRNA ligase	tRNA	A0A2P1ELB8	Moumouvirus	34.4	3.1e-162
WP_008257871.1|3211188_3211434_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008257872.1|3211987_3213112_-	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_008257873.1|3213174_3213744_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_020822857.1|3213865_3238639_-	non-ribosomal peptide synthetase	NA	A0A2K9KZV5	Tupanvirus	26.0	2.3e-143
WP_020822858.1|3239142_3246801_-	non-ribosomal peptide synthetase	NA	A0A2K9KZV5	Tupanvirus	20.7	1.5e-98
WP_020822859.1|3246797_3257072_-	non-ribosomal peptide synthetase	NA	A0A2K9KZV5	Tupanvirus	25.6	8.7e-73
>prophage 215
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3264715	3271699	5521023		Anomala_cuprea_entomopoxvirus(20.0%)	8	NA	NA
WP_041321021.1|3264715_3265663_+	daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	29.7	8.7e-20
WP_041321022.1|3265659_3266400_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_081656337.1|3266399_3267191_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_041321023.1|3267252_3268050_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_041321024.1|3268144_3268876_-	FkbM family methyltransferase	NA	G8DGX3	Emiliania_huxleyi_virus	29.3	5.5e-06
WP_041321026.1|3268955_3269918_-	GDP-L-fucose synthase	NA	R9S8B8	Prochlorococcus_phage	49.7	5.4e-86
WP_041321350.1|3269925_3270948_-	GDP-mannose 4,6-dehydratase	NA	M1IBC3	Acanthocystis_turfacea_Chlorella_virus	56.0	2.3e-103
WP_157884945.1|3271126_3271699_-	hypothetical protein	NA	A0A2K9L181	Tupanvirus	30.3	2.7e-08
>prophage 216
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3276118	3282241	5521023		Burkholderia_phage(25.0%)	5	NA	NA
WP_081656338.1|3276118_3277255_-	acyltransferase	NA	A9YX16	Burkholderia_phage	28.8	5.5e-21
WP_020822873.1|3277769_3278474_-	FkbM family methyltransferase	NA	G8DGX3	Emiliania_huxleyi_virus	28.4	2.0e-05
WP_095532430.1|3278660_3279479_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_041321352.1|3279956_3281273_+	UDP-glucose/GDP-mannose dehydrogenase family protein	NA	A0A127AXI2	Bacillus_phage	37.5	4.5e-83
WP_157884954.1|3281155_3282241_+	NAD-dependent epimerase/dehydratase family protein	NA	A0A2K9KZK0	Tupanvirus	46.8	4.5e-81
>prophage 217
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3286073	3295163	5521023		Shahe_endorna-like_virus(50.0%)	8	NA	NA
WP_041321039.1|3286073_3287330_+	glycosyltransferase	NA	A0A1L3KK54	Shahe_endorna-like_virus	34.4	4.3e-06
WP_020822880.1|3287337_3288117_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_020822881.1|3288211_3289015_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_020822883.1|3289130_3289937_-	class I SAM-dependent methyltransferase	NA	A0A2R8FDY2	Brazilian_cedratvirus	53.1	7.6e-57
WP_081656339.1|3290032_3291319_-	glycosyltransferase	NA	A0A1L3KK54	Shahe_endorna-like_virus	39.0	1.2e-08
WP_020822885.1|3291732_3293001_-	glycosyltransferase	NA	A0A1L3KK54	Shahe_endorna-like_virus	38.7	4.3e-06
WP_036429273.1|3293093_3293900_-	class I SAM-dependent methyltransferase	NA	A0A2R8FDY2	Brazilian_cedratvirus	52.2	1.6e-54
WP_008257915.1|3294053_3295163_-	NAD-dependent epimerase/dehydratase family protein	NA	M1I1Z9	Acanthocystis_turfacea_Chlorella_virus	24.1	1.6e-17
>prophage 218
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3311340	3323214	5521023		Tupanvirus(50.0%)	2	NA	NA
WP_008257939.1|3311340_3321621_+	non-ribosomal peptide synthetase	NA	A0A2K9KZV5	Tupanvirus	20.9	9.9e-93
WP_020822890.1|3321729_3323214_-	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	29.8	1.5e-10
>prophage 219
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3329931	3332916	5521023	transposase	Trichoplusia_ni_ascovirus(50.0%)	3	NA	NA
WP_008257961.1|3329931_3330699_-	beta-ketoacyl-ACP reductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	25.1	3.1e-07
WP_020822893.1|3330862_3331702_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081490066.1|3331752_3332916_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	34.1	7.9e-31
>prophage 220
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3336260	3338457	5521023		Gordonia_phage(50.0%)	2	NA	NA
WP_008257972.1|3336260_3336995_-	NlpC/P60 family peptidoglycan endopeptidase RipB	NA	A0A0K0NL58	Gordonia_phage	42.7	3.1e-17
WP_051197740.1|3337020_3338457_-	NlpC/P60 family peptidoglycan endopeptidase RipA	NA	Q9T1E7	Lactobacillus_phage	33.8	1.0e-11
>prophage 221
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3343232	3346104	5521023		Tupanvirus(50.0%)	3	NA	NA
WP_020822899.1|3343232_3344870_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	24.2	8.8e-36
WP_008257990.1|3344897_3345707_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_014382817.1|3345750_3346104_-	thioredoxin	NA	A0A2H4P7M6	Pseudomonas_phage	33.7	6.5e-13
>prophage 222
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3389645	3398287	5521023		Mollivirus(20.0%)	11	NA	NA
WP_008258067.1|3389645_3390416_+	SDR family oxidoreductase	NA	A0A0M4JSW6	Mollivirus	25.5	8.1e-08
WP_008258068.1|3390450_3390945_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_036429001.1|3390941_3391490_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_008258078.1|3391560_3393267_+	cytochrome c oxidase subunit I	NA	NA	NA	NA	NA
WP_020822935.1|3393329_3394280_+	FAD-dependent oxidoreductase	NA	A0A2K9L4X0	Tupanvirus	36.9	1.8e-49
WP_036456043.1|3394294_3394756_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020822936.1|3394853_3395387_+	DUF421 domain-containing protein	NA	NA	NA	NA	NA
WP_008258091.1|3395376_3395724_-	metal-sulfur cluster assembly factor	NA	NA	NA	NA	NA
WP_020822937.1|3395698_3396199_-	SUF system NifU family Fe-S cluster assembly protein	NA	A0A0K1LSF9	Mycobacterium_phage	46.3	4.4e-23
WP_020822938.1|3396195_3397512_-	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	45.6	4.5e-99
WP_008258094.1|3397513_3398287_-	Fe-S cluster assembly ATPase SufC	NA	W8CYL7	Bacillus_phage	28.3	1.3e-08
>prophage 223
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3403485	3404445	5521023		Staphylococcus_phage(100.0%)	1	NA	NA
WP_008258099.1|3403485_3404445_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.8	3.5e-16
>prophage 224
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3412616	3418288	5521023		Synechococcus_phage(33.33%)	6	NA	NA
WP_020822945.1|3412616_3414161_+	glucose-6-phosphate dehydrogenase	NA	A0A1D8KRR5	Synechococcus_phage	35.9	1.0e-73
WP_008258116.1|3414233_3415145_+	glucose-6-phosphate dehydrogenase assembly protein OpcA	NA	NA	NA	NA	NA
WP_008258117.1|3415141_3415897_+	6-phosphogluconolactonase	NA	NA	NA	NA	NA
WP_036429006.1|3415942_3416341_+	hypothetical protein	NA	NA	NA	NA	NA
WP_008258121.1|3416354_3417284_+	histone deacetylase family protein	NA	A0A2K9KZC4	Tupanvirus	35.0	4.2e-43
WP_008258123.1|3417298_3418288_-	aldo/keto reductase	NA	A0A1V0SKP9	Klosneuvirus	25.4	1.9e-09
>prophage 225
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3428865	3431774	5521023		Staphylococcus_phage(50.0%)	2	NA	NA
WP_020822954.1|3428865_3430497_+	bile acid CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	28.7	5.1e-28
WP_014712005.1|3430496_3431774_+	alpha/beta hydrolase	NA	A0A068F2G2	Mycobacterium_phage	39.1	2.0e-35
>prophage 226
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3435870	3437855	5521023		Streptococcus_phage(50.0%)	2	NA	NA
WP_020822956.1|3435870_3436947_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	36.5	2.0e-36
WP_008258167.1|3436943_3437855_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	34.2	1.7e-09
>prophage 227
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3443738	3449937	5521023		Staphylococcus_phage(100.0%)	6	NA	NA
WP_020822961.1|3443738_3444221_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	41.4	3.1e-13
WP_020822962.1|3444535_3445813_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	45.9	2.0e-91
WP_020822963.1|3445936_3446536_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	41.0	1.2e-30
WP_020822964.1|3446654_3447362_+	LppX_LprAFG lipoprotein	NA	NA	NA	NA	NA
WP_020822965.1|3447358_3448915_+	MFS transporter	NA	NA	NA	NA	NA
WP_008258181.1|3448911_3449937_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	34.4	3.1e-39
>prophage 228
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3457603	3464427	5521023		Acanthamoeba_polyphaga_mimivirus(25.0%)	7	NA	NA
WP_020822971.1|3457603_3458569_+	alpha/beta hydrolase	NA	A0A2L2DMU8	Acanthamoeba_polyphaga_mimivirus	31.7	8.5e-23
WP_020822972.1|3458591_3460103_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_020822973.1|3460123_3460690_+	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
WP_008258192.1|3460765_3461977_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	54.7	8.6e-113
WP_020822974.1|3462071_3463334_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	33.9	2.9e-39
WP_008258195.1|3463355_3463682_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_085976452.1|3463755_3464427_-	guanylate kinase	NA	K4JYM5	Abalone_herpesvirus	34.7	3.2e-16
>prophage 229
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3470193	3474087	5521023		Halovirus(50.0%)	4	NA	NA
WP_041321055.1|3470193_3471330_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	31.5	1.1e-37
WP_020822977.1|3471326_3471842_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020822978.1|3471838_3473131_-	dihydroorotase	NA	NA	NA	NA	NA
WP_008258204.1|3473127_3474087_-	aspartate carbamoyltransferase catalytic subunit	NA	M1I6M4	Paramecium_bursaria_Chlorella_virus	36.7	1.8e-28
>prophage 230
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3479577	3480327	5521023		Bacillus_virus(100.0%)	1	NA	NA
WP_008258209.1|3479577_3480327_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.3	2.0e-27
>prophage 231
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3492480	3493686	5521023		Pandoravirus(100.0%)	1	NA	NA
WP_008258240.1|3492480_3493686_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	36.1	2.0e-45
>prophage 232
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3497991	3504488	5521023	tRNA	Klosneuvirus(50.0%)	6	NA	NA
WP_020822991.1|3497991_3500694_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	34.5	1.8e-65
WP_009955914.1|3500825_3501227_-	YjbQ family protein	NA	NA	NA	NA	NA
WP_026071321.1|3501328_3502000_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_008258260.1|3502152_3502776_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009955916.1|3502791_3503127_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041321060.1|3503123_3504488_-	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	43.9	2.1e-83
>prophage 233
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3516334	3519580	5521023		Rhodococcus_phage(50.0%)	4	NA	NA
WP_008258283.1|3516334_3517213_+	neutral zinc metallopeptidase	NA	A0A1I9SA48	Rhodococcus_phage	47.1	1.6e-52
WP_020823000.1|3517266_3518151_-	dihydrodipicolinate synthase family protein	NA	NA	NA	NA	NA
WP_020823001.1|3518186_3518984_-	aldolase	NA	NA	NA	NA	NA
WP_020823002.1|3519055_3519580_+	helix-turn-helix transcriptional regulator	NA	I3VYZ1	Thermoanaerobacterium_phage	37.8	5.7e-05
>prophage 234
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3530347	3536635	5521023	transposase	Lactococcus_phage(66.67%)	5	NA	NA
WP_036429502.1|3530347_3531493_-	PLP-dependent cysteine synthase family protein	NA	A0A1W6JHY1	Lactococcus_phage	32.4	3.6e-36
WP_046182027.1|3531602_3532046_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008260705.1|3532058_3533090_-	cation transporter	NA	NA	NA	NA	NA
WP_072501370.1|3533235_3534417_-	pyridoxal-phosphate dependent enzyme	NA	A0A1W6JIM2	Lactococcus_phage	31.7	1.1e-06
WP_085978347.1|3535365_3536635_+|transposase	IS3 family transposase	transposase	Q8W6R2	Burkholderia_virus	50.4	1.2e-53
>prophage 235
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3545860	3548835	5521023		Mycobacterium_phage(66.67%)	3	NA	NA
WP_008260734.1|3545860_3546574_-	hypothetical protein	NA	A0A2D2W392	Mycobacterium_phage	41.6	1.8e-38
WP_008260736.1|3546597_3546906_-	hypothetical protein	NA	A0A1J0MBV8	Mycobacterium_phage	50.0	5.9e-18
WP_008260744.1|3547440_3548835_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	36.3	1.3e-48
>prophage 236
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3552281	3554525	5521023		Streptococcus_phage(100.0%)	1	NA	NA
WP_014942896.1|3552281_3554525_+	manganese-exporting P-type ATPase CtpC	NA	E4ZFI9	Streptococcus_phage	32.5	5.5e-73
>prophage 237
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3561644	3562568	5521023		Indivirus(100.0%)	1	NA	NA
WP_008260765.1|3561644_3562568_-	cation transporter	NA	A0A1V0SED0	Indivirus	24.3	1.8e-17
>prophage 238
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3575689	3577129	5521023		Mycobacterium_phage(100.0%)	1	NA	NA
WP_072501373.1|3575689_3577129_-	recombinase family protein	NA	A0A2D1GQ20	Mycobacterium_phage	38.1	1.1e-63
>prophage 239
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3580325	3597920	5521023		Klosneuvirus(33.33%)	14	NA	NA
WP_026071318.1|3580325_3581252_+	peptidylprolyl isomerase	NA	A0A1V0SCU1	Indivirus	34.8	1.5e-08
WP_008258303.1|3581265_3583644_-	RelA/SpoT family protein	NA	NA	NA	NA	NA
WP_008258305.1|3583688_3584231_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	33.6	2.2e-12
WP_014712013.1|3584238_3585942_-	hypothetical protein	NA	NA	NA	NA	NA
WP_036456203.1|3585947_3587237_-	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	30.0	8.2e-21
WP_020823020.1|3587241_3589053_-	protein translocase subunit SecD	NA	NA	NA	NA	NA
WP_008258310.1|3589165_3589492_-	preprotein translocase subunit YajC	NA	NA	NA	NA	NA
WP_014382855.1|3589565_3589679_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009953660.1|3589703_3591044_+	4-aminobutyrate--2-oxoglutarate transaminase	NA	A0A1V0SKB7	Klosneuvirus	25.8	1.4e-23
WP_020823021.1|3591183_3594708_+	carboxylic acid reductase	NA	A0A1V0SBX8	Catovirus	22.5	1.0e-17
WP_008258315.1|3594771_3595464_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008258316.1|3595593_3595980_-	DUF1304 domain-containing protein	NA	NA	NA	NA	NA
WP_008258317.1|3596078_3596765_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008258318.1|3596858_3597920_-	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	23.9	1.6e-06
>prophage 240
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3601311	3602874	5521023		Heterosigma_akashiwo_virus(100.0%)	1	NA	NA
WP_008258325.1|3601311_3602874_+	polyamine aminopropyltransferase	NA	A0A1C9C533	Heterosigma_akashiwo_virus	32.2	2.5e-08
>prophage 241
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3610744	3614658	5521023	tRNA	Tupanvirus(50.0%)	2	NA	NA
WP_020823029.1|3610744_3612820_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	36.0	2.8e-103
WP_036456117.1|3612855_3614658_+	cation:proton antiporter	NA	A0A2H4J178	uncultured_Caudovirales_phage	25.8	5.0e-08
>prophage 242
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3639506	3645904	5521023	integrase	Mycobacterium_phage(75.0%)	9	3641629:3641644	3651033:3651048
WP_020823046.1|3639506_3641054_+	AMP-binding protein	NA	A0A2H4PQM9	Staphylococcus_phage	26.2	4.0e-30
WP_036456127.1|3641058_3641889_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
3641629:3641644	attL	TCCCCCGCCGCCCATG	NA	NA	NA	NA
WP_036456207.1|3641966_3642197_-	hypothetical protein	NA	NA	NA	NA	NA
WP_036456209.1|3642387_3642834_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020823050.1|3643362_3644403_+|integrase	site-specific integrase	integrase	A0A249XVB5	Mycobacterium_phage	37.6	1.4e-50
WP_036456131.1|3644583_3644778_+	helix-turn-helix domain-containing protein	NA	S5Y6D9	Mycobacterium_phage	54.5	1.2e-08
WP_065507767.1|3644884_3645103_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_020823052.1|3645099_3645324_+	hypothetical protein	NA	NA	NA	NA	NA
WP_131820916.1|3645316_3645904_+	hypothetical protein	NA	S5VNB4	Mycobacterium_phage	47.0	1.4e-36
3651033:3651048	attR	CATGGGCGGCGGGGGA	NA	NA	NA	NA
>prophage 243
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3652466	3659567	5521023	portal,capsid,head,protease	Propionibacterium_phage(20.0%)	7	NA	NA
WP_036456139.1|3652466_3653045_+	hypothetical protein	NA	A0A1D8ETD3	Propionibacterium_phage	33.1	8.7e-15
WP_036456140.1|3653044_3654526_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020823058.1|3654548_3655754_+|portal	phage portal protein	portal	Q6JIM9	Burkholderia_virus	33.6	8.7e-49
WP_020823059.1|3655740_3656304_+|head,protease	HK97 family phage prohead protease	head,protease	A0A0M4R4P2	Enterococcus_phage	42.0	3.6e-29
WP_020823060.1|3656304_3657495_+|capsid	phage major capsid protein	capsid	A0A1J0GV00	Halomonas_phage	32.0	1.8e-38
WP_157884947.1|3657906_3658908_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020823063.1|3659132_3659567_+	hypothetical protein	NA	A0A159B6I9	Gordonia_phage	59.4	3.0e-36
>prophage 244
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3687103	3687874	5521023		Mycobacterium_phage(100.0%)	1	NA	NA
WP_008258490.1|3687103_3687874_+	hypothetical protein	NA	A0A249XSS8	Mycobacterium_phage	41.2	8.4e-13
>prophage 245
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3706482	3707388	5521023		Pithovirus(100.0%)	1	NA	NA
WP_036455222.1|3706482_3707388_-	ABC transporter ATP-binding protein	NA	W5SAS9	Pithovirus	30.6	6.8e-14
>prophage 246
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3715426	3715891	5521023		Streptomyces_phage(100.0%)	1	NA	NA
WP_014385376.1|3715426_3715891_-	dUTP diphosphatase	NA	A0A2L1IVN2	Streptomyces_phage	49.7	2.0e-30
>prophage 247
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3719543	3735235	5521023		Cyanophage(33.33%)	19	NA	NA
WP_086426999.1|3719543_3721049_+	RNA polymerase sigma factor	NA	M4SMP8	Cyanophage	34.6	2.6e-42
WP_036453325.1|3721181_3721598_+	RidA family protein	NA	NA	NA	NA	NA
WP_036453327.1|3721543_3721915_-	DUF952 domain-containing protein	NA	NA	NA	NA	NA
WP_008258551.1|3722038_3722224_+	hypothetical protein	NA	NA	NA	NA	NA
WP_008258552.1|3722288_3723290_+	YihY/virulence factor BrkB family protein	NA	NA	NA	NA	NA
WP_085976455.1|3723290_3723539_-	DUF3039 domain-containing protein	NA	A0A059VGG3	Mycobacterium_phage	46.2	1.2e-13
WP_008258554.1|3723599_3724046_+	DUF3099 domain-containing protein	NA	NA	NA	NA	NA
WP_050782802.1|3724181_3725171_+	sigma-70 family RNA polymerase sigma factor SigB	NA	M4SMP8	Cyanophage	36.9	5.1e-39
WP_008258556.1|3725300_3725990_+	metal-dependent transcriptional regulator	NA	NA	NA	NA	NA
WP_041321081.1|3726012_3727074_-	DUF4192 domain-containing protein	NA	NA	NA	NA	NA
WP_020823122.1|3727187_3728603_+	Si-specific NAD(P)(+) transhydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.3	2.7e-41
WP_020823123.1|3728712_3729549_-	trypsin-like peptidase domain-containing protein	NA	NA	NA	NA	NA
WP_020823124.1|3729779_3730751_+	PAC2 family protein	NA	NA	NA	NA	NA
WP_008258562.1|3730811_3731843_+	alpha/beta hydrolase	NA	A0A2K9VI81	Mycobacterium_phage	29.6	2.6e-17
WP_020823125.1|3731890_3732577_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_036453331.1|3732601_3733087_-	FABP family protein	NA	NA	NA	NA	NA
WP_008258565.1|3733121_3733586_-	transcriptional repressor NrdR	NA	NA	NA	NA	NA
WP_008258566.1|3733738_3734233_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
WP_020823127.1|3734524_3735235_+	repressor LexA	NA	A0A1B1P7Q3	Bacillus_phage	49.2	1.0e-09
>prophage 248
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3748529	3749582	5521023		Mycobacterium_phage(100.0%)	1	NA	NA
WP_008258595.1|3748529_3749582_-	recombinase RecA	NA	A0A2D1GPX2	Mycobacterium_phage	73.7	2.7e-131
>prophage 249
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3757220	3759539	5521023		Mycobacterium_phage(100.0%)	1	NA	NA
WP_020823148.1|3757220_3759539_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	58.6	1.6e-112
>prophage 250
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3764696	3768951	5521023		Gordonia_phage(66.67%)	5	NA	NA
WP_041321368.1|3764696_3765449_-	FAD-dependent thymidylate synthase	NA	A0A166Y9A6	Gordonia_phage	53.8	9.2e-49
WP_038536891.1|3765498_3766710_-	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_020823153.1|3766762_3767497_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008258621.1|3767596_3768082_-	dihydrofolate reductase	NA	A0A1L7N103	Ralstonia_phage	39.3	1.1e-18
WP_020823154.1|3768150_3768951_-	thymidylate synthase	NA	A0A1B3AY68	Gordonia_phage	68.2	3.5e-107
>prophage 251
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3792903	3794223	5521023		Acanthamoeba_polyphaga_lentillevirus(100.0%)	1	NA	NA
WP_085976511.1|3792903_3794223_-	insulinase family protein	NA	J3IZ03	Acanthamoeba_polyphaga_lentillevirus	24.1	4.1e-28
>prophage 252
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3820402	3822010	5521023		Mycobacterium_phage(100.0%)	1	NA	NA
WP_036429088.1|3820402_3822010_-	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	33.3	1.2e-42
>prophage 253
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3830282	3831662	5521023		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_020823189.1|3830282_3831662_+	mycothione reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.4	1.7e-32
>prophage 254
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3845509	3846184	5521023		Caulobacter_phage(100.0%)	1	NA	NA
WP_020823205.1|3845509_3846184_+	SIS domain-containing protein	NA	A0A067XQR2	Caulobacter_phage	35.2	3.4e-10
>prophage 255
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3851261	3855046	5521023		Mycobacterium_phage(33.33%)	4	NA	NA
WP_008258765.1|3851261_3852221_+	PPE family protein	NA	V5UPR1	Mycobacterium_phage	31.8	3.5e-08
WP_008258766.1|3852192_3852972_-	3-oxoacyl-ACP reductase	NA	A0A0M4JSW6	Mollivirus	26.6	5.1e-10
WP_008258767.1|3852975_3854340_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_020823210.1|3854341_3855046_-	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	NA	A0A2P9FI75	Pseudomonas_phage	45.5	3.3e-08
>prophage 256
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3874471	3875311	5521023		Trichoplusia_ni_ascovirus(100.0%)	1	NA	NA
WP_008258798.1|3874471_3875311_+	SDR family oxidoreductase	NA	A0A2N9QUX2	Trichoplusia_ni_ascovirus	46.8	5.3e-61
>prophage 257
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3879271	3880249	5521023		Tupanvirus(100.0%)	1	NA	NA
WP_008258805.1|3879271_3880249_-	phosphatidylserine decarboxylase	NA	A0A2K9L169	Tupanvirus	33.7	2.3e-31
>prophage 258
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3885702	3886599	5521023		Brevibacillus_phage(100.0%)	1	NA	NA
WP_008258813.1|3885702_3886599_-	tyrosine recombinase XerC	NA	A0A0K2CP59	Brevibacillus_phage	27.3	4.1e-19
>prophage 259
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3910593	3911313	5521023		Phaeocystis_globosa_virus(100.0%)	1	NA	NA
WP_008258881.1|3910593_3911313_-	ribonuclease HII	NA	R4THQ2	Phaeocystis_globosa_virus	28.4	2.6e-08
>prophage 260
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3916693	3917581	5521023		Erythrobacter_phage(100.0%)	1	NA	NA
WP_008258904.1|3916693_3917581_+	D-alanyl-D-alanine carboxypeptidase	NA	A0A1P8VVG5	Erythrobacter_phage	35.1	5.3e-11
>prophage 261
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3923890	3925654	5521023		Saccharomonospora_phage(100.0%)	1	NA	NA
WP_008258913.1|3923890_3925654_+	DEAD/DEAH box helicase	NA	I4AZM6	Saccharomonospora_phage	38.4	1.6e-88
>prophage 262
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3930972	3932304	5521023		uncultured_phage(100.0%)	1	NA	NA
WP_008258929.1|3930972_3932304_-	signal recognition particle-docking protein FtsY	NA	D6PHS7	uncultured_phage	37.1	3.4e-14
>prophage 263
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3937723	3939284	5521023		Bacillus_phage(50.0%)	2	NA	NA
WP_008258942.1|3937723_3938572_-	DNA-formamidopyrimidine glycosylase	NA	F8WPX6	Bacillus_phage	25.6	4.7e-17
WP_008258944.1|3938576_3939284_-	ribonuclease III	NA	A0A2K9R4Y7	Dishui_lake_phycodnavirus	36.8	8.2e-23
>prophage 264
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3945727	3950868	5521023		uncultured_Mediterranean_phage(33.33%)	6	NA	NA
WP_008258960.1|3945727_3946210_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	31.2	2.0e-17
WP_008258961.1|3946490_3947045_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_008258963.1|3947055_3947688_-	vitamin K epoxide reductase family protein	NA	NA	NA	NA	NA
WP_008258965.1|3947684_3948452_-	DsbA family protein	NA	NA	NA	NA	NA
WP_008258966.1|3948547_3949666_-	alpha/beta hydrolase	NA	M1PGN2	Moumouvirus	34.4	2.2e-30
WP_161807802.1|3950022_3950868_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	42.2	1.2e-52
>prophage 265
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3963487	3964171	5521023		Pandoravirus(100.0%)	1	NA	NA
WP_008258983.1|3963487_3964171_-	uracil-DNA glycosylase	NA	S4VZ65	Pandoravirus	39.6	1.5e-34
>prophage 266
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3972389	3973037	5521023		Streptomyces_phage(100.0%)	1	NA	NA
WP_008259006.1|3972389_3973037_-	HU family DNA-binding protein	NA	A0A2P1N0A2	Streptomyces_phage	45.4	6.3e-14
>prophage 267
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3983003	3984590	5521023		Brazilian_cedratvirus(100.0%)	1	NA	NA
WP_020823245.1|3983003_3984590_-	phosphoglycerate dehydrogenase	NA	A0A2R8FDS8	Brazilian_cedratvirus	36.5	1.4e-38
>prophage 268
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3988255	3990124	5521023		Ostreococcus_lucimarinus_virus(100.0%)	1	NA	NA
WP_020823248.1|3988255_3990124_-	acetolactate synthase large subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	28.2	9.6e-55
>prophage 269
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	3995732	3996764	5521023		Micromonas_sp._RCC1109_virus(100.0%)	1	NA	NA
WP_008259042.1|3995732_3996764_-	6-phosphofructokinase	NA	E5EQL4	Micromonas_sp._RCC1109_virus	24.8	6.6e-13
>prophage 270
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4006339	4008421	5521023		Serratia_phage(100.0%)	1	NA	NA
WP_014712104.1|4006339_4008421_-	NAD-dependent DNA ligase LigA	NA	A0A289ZTZ3	Serratia_phage	40.8	4.2e-99
>prophage 271
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4012192	4013380	5521023		Faustovirus(100.0%)	1	NA	NA
WP_014712109.1|4012192_4013380_-	cysteine desulfurase	NA	A0A1X7QGF3	Faustovirus	25.8	1.6e-26
>prophage 272
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4038918	4040247	5521023		Bodo_saltans_virus(100.0%)	1	NA	NA
WP_008259125.1|4038918_4040247_+	deoxyribodipyrimidine photo-lyase	NA	A0A2H4UV63	Bodo_saltans_virus	29.8	2.1e-56
>prophage 273
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4047971	4048832	5521023		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_029385157.1|4047971_4048832_-	ABC transporter ATP-binding protein	NA	M1I4Q1	Paramecium_bursaria_Chlorella_virus	26.6	1.3e-06
>prophage 274
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4053368	4055870	5521023		Tupanvirus(50.0%)	3	NA	NA
WP_008259160.1|4053368_4054409_+	NAD(P)-dependent alcohol dehydrogenase	NA	A0A2K9L7I1	Tupanvirus	43.1	1.6e-75
WP_008259162.1|4054413_4054764_-	DUF3349 domain-containing protein	NA	NA	NA	NA	NA
WP_008259163.1|4054907_4055870_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	R4TBI6	Mycobacterium_phage	85.3	5.9e-157
>prophage 275
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4060239	4066815	5521023		Bacillus_phage(33.33%)	7	NA	NA
WP_036453596.1|4060239_4062405_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	V9VI16	Lactococcus_phage	51.7	1.5e-208
WP_008259183.1|4062374_4062827_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A142F1R4	Bacillus_phage	40.2	5.8e-14
WP_008259184.1|4062858_4063098_-	redoxin NrdH	NA	V5UN81	Mycobacterium_phage	63.2	1.3e-20
WP_036453598.1|4063626_4064181_-	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	34.4	1.2e-05
WP_020823273.1|4064272_4064887_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_036455243.1|4064895_4065939_+	DNA polymerase IV	NA	F1C5A5	Cronobacter_phage	28.8	1.1e-20
WP_036453601.1|4065873_4066815_-	SDR family oxidoreductase	NA	W8CYX9	Bacillus_phage	28.8	1.2e-05
>prophage 276
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4079710	4081237	5521023		Chrysochromulina_ericina_virus(100.0%)	1	NA	NA
WP_020823284.1|4079710_4081237_+	Hsp70 family protein	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	31.4	3.1e-19
>prophage 277
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4097315	4098143	5521023		Bacillus_phage(100.0%)	1	NA	NA
WP_020823293.1|4097315_4098143_+	mycofactocin-coupled SDR family oxidoreductase	NA	W8CYX9	Bacillus_phage	45.0	6.7e-08
>prophage 278
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4101177	4101921	5521023		Diadromus_pulchellus_ascovirus(100.0%)	1	NA	NA
WP_008259262.1|4101177_4101921_-	SDR family oxidoreductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	32.2	1.1e-17
>prophage 279
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4109356	4109734	5521023		Gordonia_phage(100.0%)	1	NA	NA
WP_008259286.1|4109356_4109734_-	Fic family protein	NA	A0A1B3AYM0	Gordonia_phage	48.4	1.2e-20
>prophage 280
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4118841	4120305	5521023		Microcystis_phage(100.0%)	1	NA	NA
WP_008259313.1|4118841_4120305_+	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	36.6	3.3e-50
>prophage 281
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4130495	4132022	5521023		Lake_Baikal_phage(100.0%)	1	NA	NA
WP_008259336.1|4130495_4132022_-	adenylate/guanylate cyclase domain-containing protein	NA	A0A2H4N7Z5	Lake_Baikal_phage	30.0	9.7e-21
>prophage 282
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4136482	4144431	5521023		Brazilian_cedratvirus(33.33%)	3	NA	NA
WP_008259344.1|4136482_4138999_+	ATP-binding cassette domain-containing protein	NA	A0A2R8FG22	Brazilian_cedratvirus	36.6	1.8e-27
WP_008259346.1|4139006_4142132_-	DUF1668 domain-containing protein	NA	M1IKX4	Paramecium_bursaria_Chlorella_virus	28.4	4.2e-10
WP_008259350.1|4142229_4144431_-	acyltransferase	NA	A0A166XZF2	Gordonia_phage	32.2	4.9e-74
>prophage 283
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4148481	4150577	5521023		Staphylococcus_phage(50.0%)	3	NA	NA
WP_009954261.1|4148481_4148991_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	47.8	2.0e-31
WP_008259364.1|4148993_4149887_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_008259365.1|4149887_4150577_-	cell division ATP-binding protein FtsE	NA	G9BWD6	Planktothrix_phage	37.3	1.0e-30
>prophage 284
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4163040	4163838	5521023		Niemeyer_virus(100.0%)	1	NA	NA
WP_008259382.1|4163040_4163838_+	slipin family protein	NA	A0A0U2UF06	Niemeyer_virus	29.7	2.9e-24
>prophage 285
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4208678	4209578	5521023		Mycobacterium_phage(100.0%)	1	NA	NA
WP_008259485.1|4208678_4209578_-	alpha/beta hydrolase	NA	A0A1C9LZ53	Mycobacterium_phage	34.2	6.8e-06
>prophage 286
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4216098	4218201	5521023		Tupanvirus(100.0%)	1	NA	NA
WP_008259503.1|4216098_4218201_+	catalase	NA	A0A2K9L572	Tupanvirus	49.6	6.6e-145
>prophage 287
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4231930	4232590	5521023		Bacillus_phage(100.0%)	1	NA	NA
WP_008259535.1|4231930_4232590_-	UdgX family uracil-DNA binding protein	NA	S5M8J1	Bacillus_phage	36.5	6.0e-12
>prophage 288
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4236439	4238233	5521023		Bacillus_phage(100.0%)	1	NA	NA
WP_020823330.1|4236439_4238233_-	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	33.6	1.1e-10
>prophage 289
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4251000	4254249	5521023		Catovirus(100.0%)	1	NA	NA
WP_020823340.1|4251000_4254249_-	thioester reductase domain-containing protein	NA	A0A1V0SBX8	Catovirus	25.5	6.2e-09
>prophage 290
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4265205	4267596	5521023		Yellowstone_lake_phycodnavirus(100.0%)	1	NA	NA
WP_051070692.1|4265205_4267596_+	DEAD/DEAH box helicase family protein	NA	A0A0P0YML3	Yellowstone_lake_phycodnavirus	29.2	4.0e-29
>prophage 291
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4279063	4287656	5521023		Propionibacterium_phage(33.33%)	6	NA	NA
WP_008259632.1|4279063_4279315_-	WhiB family transcriptional regulator	NA	A0A173G9I6	Propionibacterium_phage	50.9	2.7e-05
WP_162143681.1|4279718_4281830_-	UvrD-helicase domain-containing protein	NA	A0A2H4UW05	Bodo_saltans_virus	22.8	2.1e-10
WP_008259646.1|4281991_4282246_+	mycoredoxin Mrx1	NA	NA	NA	NA	NA
WP_008259652.1|4282257_4283190_-	NAD(+) diphosphatase	NA	NA	NA	NA	NA
WP_008259653.1|4283189_4284260_-	potassium channel family protein	NA	NA	NA	NA	NA
WP_020823348.1|4284308_4287656_-	ATP-dependent helicase	NA	A7KV33	Bacillus_phage	20.9	3.3e-05
>prophage 292
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4298523	4302361	5521023		Diachasmimorpha_longicaudata_entomopoxvirus(50.0%)	3	NA	NA
WP_020823351.1|4298523_4300053_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.3	4.2e-48
WP_009956180.1|4300068_4301295_+	hypothetical protein	NA	NA	NA	NA	NA
WP_008259690.1|4301560_4302361_-	ParA family protein	NA	Q8JL10	Natrialba_phage	32.4	1.1e-15
>prophage 293
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4306467	4309862	5521023		Mycobacterium_phage(50.0%)	5	NA	NA
WP_003874607.1|4306467_4306722_+	transcriptional regulator WhiB1	NA	A0A2P1N2X5	Mycobacterium_phage	43.9	1.5e-11
WP_008259697.1|4306782_4308282_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_008259699.1|4308333_4308549_-	biotin/lipoyl-binding carrier protein	NA	NA	NA	NA	NA
WP_008259700.1|4308888_4309203_-	mycothiol system anti-sigma-R factor	NA	NA	NA	NA	NA
WP_008259701.1|4309199_4309862_-	sigma-70 family RNA polymerase sigma factor	NA	A0A076YQ50	Rhizobium_phage	26.5	3.1e-08
>prophage 294
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4314202	4314952	5521023		Acanthamoeba_polyphaga_mimivirus(100.0%)	1	NA	NA
WP_020823355.1|4314202_4314952_-	SDR family oxidoreductase	NA	A0A0G2Y924	Acanthamoeba_polyphaga_mimivirus	35.0	1.9e-06
>prophage 295
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4343252	4346217	5521023		Bacillus_phage(50.0%)	3	NA	NA
WP_007168097.1|4343252_4343939_-	two-component system response regulator MtrA	NA	W8CYM9	Bacillus_phage	37.6	1.6e-39
WP_020823379.1|4344019_4344652_-	dTMP kinase	NA	NA	NA	NA	NA
WP_020823380.1|4344744_4346217_-	adenosylhomocysteinase	NA	S4VPF6	Pandoravirus	28.2	2.0e-39
>prophage 296
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4356715	4356988	5521023		Mycobacterium_phage(100.0%)	1	NA	NA
WP_162143698.1|4356715_4356988_-	WhiB family transcriptional regulator	NA	A0A2P1CGA4	Mycobacterium_phage	79.7	3.2e-28
>prophage 297
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4362021	4378020	5521023		Enterobacteria_phage(16.67%)	14	NA	NA
WP_020823394.1|4362021_4363098_-	NDP-sugar synthase	NA	I7I009	Enterobacteria_phage	26.5	1.3e-16
WP_041321145.1|4363099_4363990_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_041321147.1|4363982_4364870_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	35.7	4.5e-26
WP_041321149.1|4364993_4366466_+	LCP family protein	NA	NA	NA	NA	NA
WP_041321378.1|4366514_4367189_+	TIGR03089 family protein	NA	NA	NA	NA	NA
WP_008259830.1|4367288_4367570_+	DUF1490 family protein	NA	NA	NA	NA	NA
WP_020823399.1|4367578_4369795_+	manganese-exporting P-type ATPase CtpC	NA	E4ZFI9	Streptococcus_phage	32.3	3.3e-78
WP_020823400.1|4369801_4370452_-	cation transporter	NA	NA	NA	NA	NA
WP_020823401.1|4370609_4371524_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_020823402.1|4371539_4372748_+	CoA transferase	NA	NA	NA	NA	NA
WP_020823403.1|4372751_4374737_-	protein kinase	NA	A0A2R8FG94	Cedratvirus	27.5	3.8e-09
WP_041321152.1|4374752_4375859_-	phosphate ABC transporter substrate-binding protein PstS	NA	NA	NA	NA	NA
WP_008259860.1|4376043_4376850_+	ATP-binding cassette domain-containing protein	NA	A0A1V0SE00	Indivirus	26.1	2.3e-13
WP_014712274.1|4376886_4378020_+	phosphate ABC transporter substrate-binding protein PstS	NA	A0A1D7SRJ6	Cyanophage	25.4	7.2e-13
>prophage 298
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4381563	4386329	5521023		Bacillus_phage(50.0%)	4	NA	NA
WP_020823409.1|4381563_4383165_-	CHASE3 domain-containing protein	NA	W8CYF6	Bacillus_phage	25.1	6.0e-13
WP_008259898.1|4383161_4384307_-	SpoIIE family protein phosphatase	NA	NA	NA	NA	NA
WP_020823411.1|4384554_4385724_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_014712275.1|4385807_4386329_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	47.2	2.5e-21
>prophage 299
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4401434	4405341	5521023		Bacillus_phage(50.0%)	5	NA	NA
WP_008259929.1|4401434_4402223_-	RNA polymerase sigma factor SigF	NA	A0A218KDJ1	Bacillus_phage	26.5	4.5e-14
WP_008259930.1|4402219_4402657_-	anti-sigma factor	NA	NA	NA	NA	NA
WP_008259932.1|4403088_4403400_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008259934.1|4403454_4403838_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008259936.1|4403988_4405341_-	L-lysine 6-transaminase	NA	A0A1V0SKB7	Klosneuvirus	44.9	1.4e-111
>prophage 300
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4418902	4420042	5521023		Mycobacterium_phage(100.0%)	1	NA	NA
WP_020823432.1|4418902_4420042_-	PPE family protein	NA	V5UPR1	Mycobacterium_phage	28.2	2.4e-08
>prophage 301
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4431994	4433578	5521023		Streptococcus_phage(100.0%)	1	NA	NA
WP_008259974.1|4431994_4433578_+	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	33.1	2.5e-56
>prophage 302
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4442380	4443667	5521023		Geobacillus_virus(100.0%)	1	NA	NA
WP_085976863.1|4442380_4443667_-	thymidine phosphorylase	NA	A0A0H3UZD4	Geobacillus_virus	44.6	2.1e-77
>prophage 303
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4451874	4453128	5521023		Erythrobacter_phage(100.0%)	1	NA	NA
WP_008260028.1|4451874_4453128_+	D-alanyl-D-alanine carboxypeptidase	NA	A0A1P8VVG5	Erythrobacter_phage	30.7	4.1e-09
>prophage 304
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4463014	4464403	5521023		Pandoravirus(100.0%)	1	NA	NA
WP_020823454.1|4463014_4464403_+	bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase	NA	A0A0B5JD48	Pandoravirus	26.3	3.6e-14
>prophage 305
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4471594	4476653	5521023		Brazilian_cedratvirus(50.0%)	2	NA	NA
WP_041321385.1|4471594_4474255_+	ATP-binding cassette domain-containing protein	NA	A0A2R8FG22	Brazilian_cedratvirus	35.7	9.3e-27
WP_020823463.1|4474301_4476653_+	ATP-binding cassette domain-containing protein	NA	A0A2R8FFL6	Cedratvirus	35.7	1.2e-25
>prophage 306
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4483820	4488639	5521023		Streptomyces_phage(50.0%)	2	NA	NA
WP_020823472.1|4483820_4487072_-	error-prone DNA polymerase	NA	R4TPF1	Streptomyces_phage	32.2	6.2e-118
WP_041321162.1|4487145_4488639_-	SAM-dependent DNA methyltransferase	NA	A0A1V0SLK8	Klosneuvirus	27.3	7.3e-21
>prophage 307
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4500976	4501864	5521023		Tupanvirus(100.0%)	1	NA	NA
WP_041321391.1|4500976_4501864_-	class I SAM-dependent methyltransferase	NA	A0A2K9L4K8	Tupanvirus	33.0	8.4e-33
>prophage 308
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4508875	4510420	5521023		Hokovirus(100.0%)	1	NA	NA
WP_020823491.1|4508875_4510420_-	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	26.1	4.1e-11
>prophage 309
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4520155	4521751	5521023		Klosneuvirus(100.0%)	1	NA	NA
WP_014942860.1|4520155_4521751_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	38.6	1.2e-85
>prophage 310
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4524842	4525145	5521023		Mycobacterium_virus(100.0%)	1	NA	NA
WP_020823504.1|4524842_4525145_+	WhiB family transcriptional regulator	NA	I6XD27	Mycobacterium_virus	44.2	1.2e-10
>prophage 311
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4531299	4534582	5521023	tRNA	uncultured_virus(66.67%)	3	NA	NA
WP_020823515.1|4531299_4532919_-	chaperonin GroEL	NA	A0A219YK78	uncultured_virus	51.3	1.9e-136
WP_007167930.1|4533014_4533317_-	co-chaperone GroES	NA	A0A221S3C8	uncultured_virus	54.8	5.6e-21
WP_020823516.1|4533556_4534582_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A291ATS8	Pandoravirus	36.4	1.4e-34
>prophage 312
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4543301	4545167	5521023		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_020823525.1|4543301_4545167_-	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	M1H1Z3	Paramecium_bursaria_Chlorella_virus	37.1	2.6e-100
>prophage 313
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4554718	4562550	5521023	protease	Mycobacterium_phage(100.0%)	4	NA	NA
WP_020823539.1|4554718_4558396_-	type VII secretion protein EccCb	NA	V5UPA0	Mycobacterium_phage	30.3	7.9e-61
WP_020823540.1|4558489_4559899_+	type VII secretion integral membrane protein EccD	NA	NA	NA	NA	NA
WP_051197839.1|4559943_4561212_+|protease	type VII secretion-associated serine protease mycosin	protease	V5UPA7	Mycobacterium_phage	34.7	4.5e-48
WP_020823542.1|4561176_4562550_-	type VII secretion protein EccB	NA	V5UN45	Mycobacterium_phage	29.6	8.7e-29
>prophage 314
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4569095	4580795	5521023		Burkholderia_phage(50.0%)	10	NA	NA
WP_014381081.1|4569095_4570760_+	FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	29.9	1.1e-33
WP_020823546.1|4570756_4572283_+	cyclic nucleotide-binding domain-containing protein	NA	W8CYF6	Bacillus_phage	37.4	1.3e-12
WP_020823547.1|4572322_4573171_+	LLM class F420-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_020823548.1|4573191_4574058_+	LLM class F420-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014381085.1|4574085_4575081_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	46.2	2.2e-74
WP_041321399.1|4575082_4575700_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	38.8	9.6e-28
WP_020823550.1|4575940_4577065_+	acyltransferase	NA	A9YX16	Burkholderia_phage	28.9	8.2e-17
WP_020823551.1|4577209_4578346_+	acyltransferase	NA	A9YX16	Burkholderia_phage	30.4	5.2e-19
WP_020823552.1|4578441_4579608_+	acyltransferase	NA	A9YX16	Burkholderia_phage	26.4	7.7e-18
WP_009952894.1|4579706_4580795_+	acyltransferase	NA	A9YX16	Burkholderia_phage	29.9	3.5e-17
>prophage 315
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4589504	4590560	5521023		Faustovirus(100.0%)	1	NA	NA
WP_020823558.1|4589504_4590560_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	A0A1X7QHI1	Faustovirus	29.6	2.4e-10
>prophage 316
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4594044	4594740	5521023		Planktothrix_phage(100.0%)	1	NA	NA
WP_020823562.1|4594044_4594740_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.4	5.6e-32
>prophage 317
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4601975	4602521	5521023		Tupanvirus(100.0%)	1	NA	NA
WP_041321192.1|4601975_4602521_-	adenylate kinase	NA	A0A2K9L833	Tupanvirus	33.8	1.8e-14
>prophage 318
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4607104	4608085	5521023		Only_Syngen_Nebraska_virus(100.0%)	1	NA	NA
WP_041321194.1|4607104_4608085_+	3-phosphoglycerate dehydrogenase	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	26.4	1.1e-17
>prophage 319
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4623348	4624239	5521023		Microcystis_phage(100.0%)	1	NA	NA
WP_020823586.1|4623348_4624239_-	formylglycine-generating enzyme family protein	NA	A0A075BSL8	Microcystis_phage	31.4	4.3e-21
>prophage 320
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4634630	4636076	5521023		Acanthamoeba_castellanii_mimivirus(100.0%)	1	NA	NA
WP_020823593.1|4634630_4636076_-	mycofactocin system GMC family oxidoreductase MftG	NA	A0A1E1EUX1	Acanthamoeba_castellanii_mimivirus	24.7	2.0e-07
>prophage 321
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4643005	4643830	5521023		Staphylococcus_phage(100.0%)	1	NA	NA
WP_041321209.1|4643005_4643830_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	42.1	1.8e-50
>prophage 322
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4649255	4652662	5521023		Hokovirus(50.0%)	2	NA	NA
WP_008260847.1|4649255_4650446_-	elongation factor Tu	NA	A0A1V0SGC3	Hokovirus	27.4	1.4e-30
WP_008260848.1|4650556_4652662_-	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	26.5	2.7e-61
>prophage 323
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4661522	4670441	5521023		Vibrio_phage(33.33%)	3	NA	NA
WP_007167803.1|4661522_4665473_-	DNA-directed RNA polymerase subunit beta'	NA	A0A2I7QNZ7	Vibrio_phage	25.6	1.2e-51
WP_086427211.1|4665514_4669036_-	DNA-directed RNA polymerase subunit beta	NA	A0A1B1ISA9	uncultured_Mediterranean_phage	22.4	1.1e-38
WP_007167801.1|4669430_4670441_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.1	1.4e-23
>prophage 324
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4681745	4685984	5521023		Micromonas_pusilla_virus(33.33%)	4	NA	NA
WP_008260898.1|4681745_4683068_+	AarF/ABC1/UbiB kinase family protein	NA	G8DDN0	Micromonas_pusilla_virus	29.4	1.1e-31
WP_008260899.1|4683070_4683976_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_008260900.1|4684064_4684925_+	class I SAM-dependent methyltransferase	NA	A0A2K9L4K8	Tupanvirus	28.4	3.4e-23
WP_008260901.1|4685087_4685984_+	class I SAM-dependent methyltransferase	NA	A0A2I2L5L3	Orpheovirus	29.2	1.2e-23
>prophage 325
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4698732	4701540	5521023		Tupanvirus(50.0%)	4	NA	NA
WP_008260961.1|4698732_4699737_-	patatin-like phospholipase family protein	NA	A0A2K9KZN5	Tupanvirus	24.1	3.1e-07
WP_014385825.1|4699737_4700205_-	cyanase	NA	NA	NA	NA	NA
WP_008260964.1|4700226_4700976_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_008260966.1|4701024_4701540_-	nitroreductase family protein	NA	A0A1V0E011	Clostridioides_phage	27.0	7.5e-10
>prophage 326
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4705906	4710927	5521023		Cafeteria_roenbergensis_virus(50.0%)	2	NA	NA
WP_008260972.1|4705906_4709209_+	exodeoxyribonuclease V subunit beta	NA	E3T5J8	Cafeteria_roenbergensis_virus	19.6	1.0e-06
WP_020823625.1|4709205_4710927_+	exodeoxyribonuclease V subunit alpha	NA	A0A0K2FLP8	Brevibacillus_phage	24.4	1.1e-15
>prophage 327
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4728734	4729607	5521023		Mycobacterium_phage(100.0%)	1	NA	NA
WP_014385836.1|4728734_4729607_-	alpha/beta fold hydrolase	NA	G1DB77	Mycobacterium_phage	29.3	1.0e-14
>prophage 328
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4738211	4739723	5521023		Pandoravirus(100.0%)	1	NA	NA
WP_008261004.1|4738211_4739723_+	NAD(P)/FAD-dependent oxidoreductase	NA	A0A0B5J2K3	Pandoravirus	40.6	7.4e-05
>prophage 329
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4758928	4760530	5521023		Staphylococcus_phage(100.0%)	1	NA	NA
WP_008261039.1|4758928_4760530_+	AMP-binding protein	NA	A0A2H4PQM9	Staphylococcus_phage	25.7	5.6e-27
>prophage 330
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4774685	4775714	5521023		Bodo_saltans_virus(100.0%)	1	NA	NA
WP_008261075.1|4774685_4775714_-	NAD-dependent epimerase/dehydratase family protein	NA	A0A2H4UUK0	Bodo_saltans_virus	27.7	7.2e-20
>prophage 331
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4789524	4793091	5521023		Catovirus(100.0%)	1	NA	NA
WP_008261110.1|4789524_4793091_+	thioester reductase domain-containing protein	NA	A0A1V0SBX8	Catovirus	24.2	3.9e-12
>prophage 332
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4798316	4802707	5521023		Gordonia_phage(50.0%)	3	NA	NA
WP_008261120.1|4798316_4800440_+	acyltransferase	NA	A0A166XZF2	Gordonia_phage	32.4	2.1e-74
WP_008261124.1|4800631_4801270_-	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA	NA
WP_085976866.1|4801408_4802707_-	acyltransferase	NA	A0A2H4JA46	uncultured_Caudovirales_phage	26.7	1.2e-14
>prophage 333
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4815261	4818455	5521023		Tupanvirus(50.0%)	3	NA	NA
WP_008261174.1|4815261_4816188_+	class I SAM-dependent methyltransferase	NA	A0A2K9L4K8	Tupanvirus	30.1	4.3e-24
WP_081614505.1|4816257_4817322_-	acyltransferase family protein	NA	NA	NA	NA	NA
WP_008261176.1|4817327_4818455_-	SDR family oxidoreductase	NA	M1IDV7	Acanthocystis_turfacea_Chlorella_virus	28.5	2.0e-10
>prophage 334
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4824807	4826811	5521023		Bacillus_phage(100.0%)	2	NA	NA
WP_008261205.1|4824807_4825491_-	two-component sensory transduction protein RegX	NA	W8CYM9	Bacillus_phage	40.4	3.4e-42
WP_008261206.1|4825581_4826811_-	two-component sensor histidine kinase	NA	W8CYF6	Bacillus_phage	33.0	1.9e-27
>prophage 335
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4842200	4843988	5521023		Tupanvirus(100.0%)	2	NA	NA
WP_008261257.1|4842200_4843067_+	class I SAM-dependent methyltransferase	NA	A0A2K9L4K8	Tupanvirus	32.4	1.7e-30
WP_008261260.1|4843127_4843988_-	class I SAM-dependent methyltransferase	NA	A0A2K9L4K8	Tupanvirus	33.1	2.6e-31
>prophage 336
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4849926	4851324	5521023		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_008261269.1|4849926_4851324_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.4	1.6e-46
>prophage 337
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4854455	4860269	5521023		Klosneuvirus(33.33%)	6	NA	NA
WP_008261277.1|4854455_4856636_+	S9 family peptidase	NA	A0A1V0SHT0	Klosneuvirus	30.8	1.5e-30
WP_008261279.1|4856646_4856958_+	hypothetical protein	NA	NA	NA	NA	NA
WP_008261283.1|4856965_4857877_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_008261284.1|4857956_4858409_+	DUF5078 domain-containing protein	NA	NA	NA	NA	NA
WP_008261287.1|4858656_4859304_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	41.1	1.9e-34
WP_008261290.1|4859300_4860269_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A0N7CCA3	Skermania_phage	73.0	5.6e-131
>prophage 338
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4872816	4874442	5521023		uncultured_virus(100.0%)	1	NA	NA
WP_008261313.1|4872816_4874442_-	chaperonin GroEL	NA	A0A240F779	uncultured_virus	55.7	6.0e-154
>prophage 339
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4882820	4884992	5521023		Phaeocystis_globosa_virus(100.0%)	1	NA	NA
WP_036429626.1|4882820_4884992_+	AAA family ATPase	NA	R4TQL5	Phaeocystis_globosa_virus	40.1	4.0e-36
>prophage 340
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4893709	4894018	5521023		Gordonia_phage(100.0%)	1	NA	NA
WP_008261362.1|4893709_4894018_-	DUF3263 domain-containing protein	NA	A0A1B3AZ99	Gordonia_phage	44.9	4.2e-08
>prophage 341
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4897137	4901574	5521023		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_008261375.1|4897137_4901574_+	cation-translocating P-type ATPase	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	27.8	6.0e-39
>prophage 342
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4909209	4910595	5521023		Mycobacterium_phage(100.0%)	1	NA	NA
WP_008261397.1|4909209_4910595_+	serine hydrolase	NA	A0A2P1JQM9	Mycobacterium_phage	27.4	1.2e-12
>prophage 343
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4914212	4917580	5521023		Lactobacillus_phage(50.0%)	3	NA	NA
WP_008261406.1|4914212_4915433_+	peptidoglycan DD-metalloendopeptidase family protein	NA	O03937	Lactobacillus_phage	30.2	3.9e-12
WP_020823665.1|4915416_4916457_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008261409.1|4916596_4917580_-	NAD-dependent epimerase/dehydratase family protein	NA	A0A2K9L4U8	Tupanvirus	30.4	1.3e-31
>prophage 344
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4923024	4923792	5521023		Gordonia_phage(100.0%)	1	NA	NA
WP_008261430.1|4923024_4923792_-	SGNH/GDSL hydrolase family protein	NA	A0A160DD06	Gordonia_phage	31.8	6.6e-10
>prophage 345
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4929720	4932009	5521023		Myeloproliferative_sarcoma_virus(100.0%)	1	NA	NA
WP_008261442.1|4929720_4932009_+	protein kinase	NA	Q83745	Myeloproliferative_sarcoma_virus	28.2	2.6e-09
>prophage 346
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4950699	4951998	5521023		Pandoravirus(100.0%)	1	NA	NA
WP_014385923.1|4950699_4951998_-	adenylosuccinate synthase	NA	A0A291AUF9	Pandoravirus	34.4	4.9e-66
>prophage 347
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4963539	4964079	5521023		Prochlorococcus_phage(100.0%)	1	NA	NA
WP_008261506.1|4963539_4964079_-	orotate phosphoribosyltransferase	NA	Q58MW1	Prochlorococcus_phage	44.4	2.5e-16
>prophage 348
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4967260	4969807	5521023		Cronobacter_phage(100.0%)	1	NA	NA
WP_008261516.1|4967260_4969807_-	ATP-dependent chaperone ClpB	NA	K4FB40	Cronobacter_phage	35.6	7.5e-119
>prophage 349
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4973044	4976767	5521023		Yellowstone_lake_phycodnavirus(50.0%)	3	NA	NA
WP_020823695.1|4973044_4974223_-	molecular chaperone DnaJ	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	27.4	3.0e-14
WP_036454061.1|4974272_4974911_-	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_014385934.1|4974907_4976767_-	molecular chaperone DnaK	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	50.3	1.1e-143
>prophage 350
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	4991424	4998247	5521023		Escherichia_phage(33.33%)	7	NA	NA
WP_008261569.1|4991424_4992300_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	K7QKA7	Escherichia_phage	56.4	4.6e-92
WP_020823707.1|4992335_4992710_-	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_020823708.1|4992739_4993495_-	maleylpyruvate isomerase family mycothiol-dependent enzyme	NA	NA	NA	NA	NA
WP_036454068.1|4993595_4994252_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_020823710.1|4994501_4995824_+	MFS transporter	NA	Q6JIH2	Burkholderia_virus	32.7	5.4e-44
WP_036455295.1|4995842_4996787_-	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_020823712.1|4996921_4998247_-	UDP-glucose/GDP-mannose dehydrogenase family protein	NA	A0A127AXI2	Bacillus_phage	36.3	1.7e-69
>prophage 351
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	5003468	5004664	5521023		Saccharomonospora_phage(50.0%)	2	NA	NA
WP_008261591.1|5003468_5004041_-	dCTP deaminase	NA	I4AZP2	Saccharomonospora_phage	76.9	2.2e-79
WP_014381317.1|5004070_5004664_-	hypothetical protein	NA	Q9ZX60	Mycobacterium_phage	45.9	1.7e-21
>prophage 352
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	5027280	5028108	5521023		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
WP_009956078.1|5027280_5028108_-	glycoside hydrolase family 16 protein	NA	M1I0P8	Acanthocystis_turfacea_Chlorella_virus	33.3	3.5e-09
>prophage 353
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	5044194	5045604	5521023	protease	Mycobacterium_phage(100.0%)	1	NA	NA
WP_008261653.1|5044194_5045604_-|protease	type VII secretion-associated serine protease mycosin	protease	V5UPA7	Mycobacterium_phage	39.7	7.7e-73
>prophage 354
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	5050543	5057999	5521023		Mycobacterium_phage(100.0%)	3	NA	NA
WP_020823734.1|5050543_5054533_-	type VII secretion protein EccC	NA	V5UPA0	Mycobacterium_phage	26.6	6.3e-96
WP_020823735.1|5054529_5056149_-	type VII secretion protein EccB	NA	NA	NA	NA	NA
WP_003879178.1|5056145_5057999_-	type VII secretion system ESX-3 AAA family ATPase EccA3	NA	V5UQM2	Mycobacterium_phage	42.0	3.6e-102
>prophage 355
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	5075298	5076987	5521023		Staphylococcus_phage(100.0%)	1	NA	NA
WP_036455303.1|5075298_5076987_-	acyl-CoA synthetase	NA	A0A2H4PQM9	Staphylococcus_phage	28.7	1.9e-25
>prophage 356
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	5092690	5094634	5521023		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_020823764.1|5092690_5094634_+	fumarate reductase/succinate dehydrogenase flavoprotein subunit	NA	M1HTN0	Paramecium_bursaria_Chlorella_virus	27.4	7.7e-23
>prophage 357
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	5124226	5128321	5521023		Yellowstone_lake_phycodnavirus(50.0%)	3	NA	NA
WP_020823781.1|5124226_5125876_-	acetolactate synthase large subunit	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	24.8	3.7e-34
WP_036429637.1|5125956_5127375_+	NADP-dependent succinic semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_008261828.1|5127379_5128321_-	R2-like ligand-binding oxidase	NA	A0A1V0CNG9	Kaumoebavirus	27.3	8.4e-07
>prophage 358
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	5141539	5142769	5521023		Cronobacter_phage(100.0%)	1	NA	NA
WP_008261842.1|5141539_5142769_-	TerC family protein	NA	K4F9T9	Cronobacter_phage	33.8	2.1e-34
>prophage 359
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	5146623	5148141	5521023		Hepacivirus(100.0%)	1	NA	NA
WP_008261848.1|5146623_5148141_-	long-chain fatty acid--CoA ligase	NA	Q75ZG1	Hepacivirus	29.7	1.1e-32
>prophage 360
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	5151904	5153110	5521023		Mycobacterium_phage(100.0%)	1	NA	NA
WP_014385999.1|5151904_5153110_-	alpha/beta hydrolase	NA	A0A088FQA2	Mycobacterium_phage	39.0	2.1e-47
>prophage 361
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	5184307	5186296	5521023		Klosneuvirus(100.0%)	1	NA	NA
WP_020823799.1|5184307_5186296_+	M13 family metallopeptidase	NA	A0A1V0SHG2	Klosneuvirus	29.5	2.3e-86
>prophage 362
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	5195488	5196145	5521023		Mycobacterium_phage(100.0%)	1	NA	NA
WP_020823804.1|5195488_5196145_-	O-methyltransferase	NA	S5YRC3	Mycobacterium_phage	51.4	1.3e-46
>prophage 363
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	5208957	5210313	5521023	transposase	Mycobacterium_phage(100.0%)	1	NA	NA
WP_141244938.1|5208957_5210313_-|transposase	IS1380 family transposase	transposase	A0A222ZN33	Mycobacterium_phage	64.3	6.8e-159
>prophage 364
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	5224174	5228827	5521023		Staphylococcus_phage(50.0%)	4	NA	NA
WP_036455311.1|5224174_5225779_-	long-chain-fatty-acid--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	28.1	2.3e-33
WP_020823825.1|5226733_5227174_-	SRPBCC family protein	NA	NA	NA	NA	NA
WP_020823826.1|5227205_5227688_-	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_036454152.1|5227702_5228827_+	alcohol dehydrogenase catalytic domain-containing protein	NA	A0A0K0KVL7	Prochlorococcus_phage	29.3	4.9e-30
>prophage 365
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	5251211	5251964	5521023		Trichoplusia_ni_ascovirus(100.0%)	1	NA	NA
WP_008262027.1|5251211_5251964_-	glucose 1-dehydrogenase	NA	Q06VL0	Trichoplusia_ni_ascovirus	33.2	1.7e-18
>prophage 366
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	5274068	5275394	5521023		Cotesia_sesamiae_Mombasa_bracovirus(100.0%)	1	NA	NA
WP_036454164.1|5274068_5275394_-	cytochrome P450	NA	I6WI04	Cotesia_sesamiae_Mombasa_bracovirus	23.9	2.1e-19
>prophage 367
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	5292976	5295908	5521023		Anomala_cuprea_entomopoxvirus(50.0%)	3	NA	NA
WP_020823871.1|5292976_5293816_+	ATP-binding cassette domain-containing protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	30.8	6.1e-25
WP_008262137.1|5293805_5294624_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_020823872.1|5294858_5295908_+	esterase family protein	NA	A0A2I6B0H1	Macacine_betaherpesvirus	67.0	5.5e-124
>prophage 368
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	5305811	5313223	5521023		Yellowstone_lake_phycodnavirus(50.0%)	4	NA	NA
WP_036455323.1|5305811_5307548_+	oxalyl-CoA decarboxylase	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	25.6	8.7e-26
WP_014712552.1|5307531_5308461_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_020823881.1|5308790_5309546_+	L,D-transpeptidase	NA	NA	NA	NA	NA
WP_036455325.1|5309734_5313223_+	carboxylic acid reductase	NA	A0A1V0SBX8	Catovirus	24.2	1.4e-11
>prophage 369
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	5318382	5323782	5521023		Gordonia_phage(50.0%)	3	NA	NA
WP_020823888.1|5318382_5320377_-	acyltransferase family protein	NA	A0A166XZF2	Gordonia_phage	37.2	1.5e-42
WP_020823890.1|5320610_5322041_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_020823891.1|5322069_5323782_-	thiamine pyrophosphate-binding protein	NA	G9E525	Ostreococcus_lucimarinus_virus	22.7	1.2e-11
>prophage 370
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	5335016	5337691	5521023		Staphylococcus_phage(50.0%)	2	NA	NA
WP_036455333.1|5335016_5336534_+	long-chain fatty acid--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	26.4	7.6e-34
WP_020823901.1|5336548_5337691_+	NDMA-dependent alcohol dehydrogenase	NA	E3SJ82	Synechococcus_phage	27.4	1.0e-30
>prophage 371
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	5346755	5348327	5521023		Staphylococcus_phage(100.0%)	1	NA	NA
WP_020823907.1|5346755_5348327_-	AMP-binding protein	NA	A0A2H4PQM9	Staphylococcus_phage	25.3	7.1e-27
>prophage 372
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	5377759	5380030	5521023		uncultured_virus(100.0%)	1	NA	NA
WP_020823940.1|5377759_5380030_+	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	38.1	2.8e-93
>prophage 373
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	5404366	5405638	5521023		Streptococcus_phage(100.0%)	1	NA	NA
WP_020823959.1|5404366_5405638_+	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	49.6	8.2e-98
>prophage 374
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	5413755	5414604	5521023		Rhodococcus_phage(100.0%)	1	NA	NA
WP_036454218.1|5413755_5414604_-	metallophosphatase	NA	A0A2D0ZMA7	Rhodococcus_phage	44.3	8.8e-56
>prophage 375
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	5417735	5419271	5521023		Aureococcus_anophage(100.0%)	1	NA	NA
WP_036454222.1|5417735_5419271_+	DNA mismatch repair protein	NA	A0A076FGT9	Aureococcus_anophage	24.2	3.7e-12
>prophage 376
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	5423206	5429309	5521023		Pithovirus(33.33%)	5	NA	NA
WP_051197780.1|5423206_5424199_+	ATP-binding cassette domain-containing protein	NA	W5SAS9	Pithovirus	30.6	9.1e-12
WP_081656356.1|5424517_5425222_-	NUDIX domain-containing protein	NA	NA	NA	NA	NA
WP_020823977.1|5425157_5425955_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.3	2.2e-08
WP_020823978.1|5426332_5426575_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020823980.1|5427635_5429309_+	energy-dependent translational throttle protein EttA	NA	A0A2K9L0W2	Tupanvirus	24.2	6.6e-39
>prophage 377
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	5440053	5440542	5521023		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_020823986.1|5440053_5440542_-	inorganic diphosphatase	NA	A0A2H4J8U1	uncultured_Caudovirales_phage	45.3	2.3e-32
>prophage 378
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	5444848	5445547	5521023		Tupanvirus(100.0%)	1	NA	NA
WP_020823990.1|5444848_5445547_+	adenylyl-sulfate kinase	NA	A0A2K9L4R9	Tupanvirus	41.9	4.0e-30
>prophage 379
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	5469736	5470630	5521023		Prochlorococcus_phage(100.0%)	1	NA	NA
WP_020824006.1|5469736_5470630_-	fructose bisphosphate aldolase	NA	A0A0K0KVJ8	Prochlorococcus_phage	27.6	1.7e-09
>prophage 380
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	5489447	5491774	5521023		Mycobacterium_phage(50.0%)	2	NA	NA
WP_020824020.1|5489447_5490935_-	type VII secretion protein EccB	NA	V5UN45	Mycobacterium_phage	37.1	4.0e-72
WP_081656359.1|5490937_5491774_-	transglycosylase	NA	A0A1L2JY60	Aeribacillus_phage	43.6	1.8e-13
>prophage 381
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	5500604	5502047	5521023	tRNA	Mycobacterium_phage(100.0%)	1	NA	NA
WP_020824028.1|5500604_5502047_-|tRNA	CCA tRNA nucleotidyltransferase	tRNA	A0A249XS88	Mycobacterium_phage	37.1	3.7e-62
>prophage 382
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	5511261	5512622	5521023		Orpheovirus(50.0%)	2	NA	NA
WP_020824036.1|5511261_5512272_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	46.9	2.7e-67
WP_008262471.1|5512268_5512622_+	thioredoxin	NA	A0A1J0GW78	Streptomyces_phage	56.7	1.5e-25
>prophage 383
NC_021715	Mycobacterium intracellulare subsp. yongonense 05-1390, complete sequence	5521023	5516016	5516985	5521023		Natrialba_phage(100.0%)	1	NA	NA
WP_020824038.1|5516016_5516985_-	ParA family protein	NA	Q8JL10	Natrialba_phage	33.9	5.9e-24
>prophage 1
NC_020275	Mycobacterium intracellulare subsp. yongonense 05-1390 plasmid pMyong1, complete sequence	122976	4185	55252	122976	protease,transposase	Mycobacterium_phage(41.67%)	49	NA	NA
WP_015388812.1|4185_5529_-|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	34.8	1.4e-39
WP_015388815.1|6038_6371_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_015388816.1|6367_6799_+|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	34.1	1.2e-05
WP_041321582.1|7002_7557_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015388820.1|9093_9450_+	hypothetical protein	NA	NA	NA	NA	NA
WP_139803235.1|9979_10201_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015388822.1|10235_10784_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157884955.1|11598_11760_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015388824.1|11775_14841_-	MMPL family transporter	NA	NA	NA	NA	NA
WP_041321537.1|15086_15698_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_015388826.1|15821_17279_+	cytochrome P450	NA	A0A2I2L481	Orpheovirus	22.3	2.7e-20
WP_015388827.1|17422_18565_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_015388828.1|18767_20075_-|transposase	IS256-like element ISMyo1 family transposase	transposase	NA	NA	NA	NA
WP_041321584.1|20360_21056_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_041321539.1|21147_22086_+	R2-like ligand-binding oxidase	NA	NA	NA	NA	NA
WP_015388832.1|22292_22703_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041321541.1|22757_24374_+	long-chain fatty acid--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	26.2	2.3e-20
WP_015388834.1|24424_25531_+	NDMA-dependent alcohol dehydrogenase	NA	E3SJ82	Synechococcus_phage	28.8	1.2e-33
WP_051197875.1|25553_26651_+	BtrH N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_015388836.1|26647_27316_+	transglutaminase domain-containing protein	NA	NA	NA	NA	NA
WP_041321542.1|27473_28349_-	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_041321544.1|28454_29123_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_015388840.1|29145_30036_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_081656387.1|30555_31314_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_041321545.1|31358_31955_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_041321588.1|32014_32533_-	thioesterase	NA	NA	NA	NA	NA
WP_015388847.1|32665_33319_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_081656389.1|33320_34013_+|transposase	IS3 family transposase	transposase	A0A2P1JR32	Mycobacterium_phage	38.0	1.6e-18
WP_041321547.1|34192_34759_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015388850.1|34838_34988_-	hypothetical protein	NA	NA	NA	NA	NA
WP_139803277.1|34980_35397_-	type IV secretion system protein VirD4	NA	NA	NA	NA	NA
WP_139803276.1|35557_36085_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015388855.1|36991_37258_-	hypothetical protein	NA	NA	NA	NA	NA
WP_081656403.1|37372_38542_+|transposase	transposase	transposase	I4AZI9	Saccharomonospora_phage	41.2	1.9e-61
WP_015388858.1|38590_39994_-	type IV secretory system conjugative DNA transfer family protein	NA	V5UN59	Mycobacterium_phage	28.7	7.7e-49
WP_015388859.1|39996_40671_-	hypothetical protein	NA	V5UQM8	Mycobacterium_phage	26.8	4.0e-11
WP_007172323.1|40645_41080_-	hypothetical protein	NA	A0A160DCX5	Gordonia_phage	44.6	3.6e-05
WP_139808931.1|41178_41484_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015388861.1|41480_42695_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015388862.1|42711_43638_+	conjugal transfer protein	NA	NA	NA	NA	NA
WP_015388863.1|43651_43879_+	hypothetical protein	NA	NA	NA	NA	NA
WP_139808194.1|43904_44153_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007172329.1|44173_44458_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015388865.1|44531_47549_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_015388866.1|47545_49618_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015388867.1|49770_50097_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015388868.1|50104_51937_-	type VII secretion AAA-ATPase EccA	NA	V5UQM2	Mycobacterium_phage	30.4	9.1e-66
WP_081656391.1|51959_53552_-	type VII secretion protein EccE	NA	NA	NA	NA	NA
WP_081656392.1|53551_55252_-|protease	type VII secretion-associated serine protease mycosin	protease	V5UPA7	Mycobacterium_phage	35.2	2.8e-69
