The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_021670	Staphylococcus aureus, complete sequence	2980548	44378	84636	2980548	transposase,integrase	Streptococcus_phage(37.5%)	37	43863:43879	85412:85428
43863:43879	attL	AATGAAATCATGCATCC	NA	NA	NA	NA
WP_000868132.1|44378_45464_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A0A8WIF9	Clostridium_phage	28.3	4.5e-12
WP_000361059.1|47358_47736_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_001072201.1|48794_49526_-	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NA	E4ZFQ0	Streptococcus_phage	47.5	1.9e-51
WP_010959190.1|49608_49668_-	erythromycin resistance leader peptide	NA	NA	NA	NA	NA
WP_001092058.1|50059_50722_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_000373151.1|51269_52142_+	HTH domain-containing protein	NA	NA	NA	NA	NA
WP_000065262.1|52198_52489_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000397419.1|52504_52993_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000717928.1|53127_53655_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000941331.1|53716_54133_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001803222.1|54421_54586_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001070883.1|54599_54821_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020444591.1|54956_55535_+	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_001824952.1|55614_57843_-	type I restriction endonuclease subunit R	NA	A0A220A398	Liberibacter_phage	26.6	1.8e-44
WP_001105999.1|57889_58564_-|transposase	IS6-like element IS257 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	99.1	2.0e-127
WP_000163428.1|58846_60193_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_000425271.1|60492_60900_+	Hg(II)-responsive transcriptional regulator MerR	NA	NA	NA	NA	NA
WP_000010351.1|61267_61948_+	cytochrome c biosynthesis protein	NA	NA	NA	NA	NA
WP_000968575.1|62082_62421_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000193219.1|62478_64122_+	mercury(II) reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	29.4	1.7e-50
WP_020444593.1|64203_64854_+	organomercurial lyase MerB	NA	NA	NA	NA	NA
WP_041205518.1|65048_65579_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001106057.1|65614_66289_-|transposase	IS6-like element IS257 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	99.1	2.6e-127
WP_000958858.1|67630_68374_+	glycerophosphoryl diester phosphodiesterase	NA	NA	NA	NA	NA
WP_000872606.1|68470_68899_+	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_078056052.1|68944_70954_-	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NA	NA	NA	NA	NA
WP_000952923.1|71050_72808_+	beta-lactam sensor/signal transducer MecR1	NA	NA	NA	NA	NA
WP_014532405.1|73263_73332_-	phenol-soluble modulin PSM-mec	NA	NA	NA	NA	NA
WP_000427807.1|73651_74800_+	ROK family transcriptional regulator	NA	NA	NA	NA	NA
WP_000438836.1|76279_77344_-	DsrE/DsrF/DrsH-like family protein	NA	NA	NA	NA	NA
WP_000220507.1|77479_77740_+	persulfide-sensing transcriptional repressor CstR	NA	NA	NA	NA	NA
WP_000350222.1|77739_78384_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_000562107.1|78651_79269_-	CadD family cadmium resistance transporter	NA	NA	NA	NA	NA
WP_000378485.1|79349_81764_-	cadmium-translocating P-type ATPase CadA	NA	E4ZFI9	Streptococcus_phage	63.4	1.3e-250
WP_000159127.1|81756_82122_-	winged helix-turn-helix transcriptional regulator	NA	E4ZFI8	Streptococcus_phage	49.6	7.7e-25
WP_000361060.1|82359_82737_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_020444597.1|82743_84636_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
85412:85428	attR	GGATGCATGATTTCATT	NA	NA	NA	NA
>prophage 2
NC_021670	Staphylococcus aureus, complete sequence	2980548	401187	413191	2980548	transposase	Streptococcus_phage(72.73%)	12	NA	NA
WP_000690628.1|401187_401781_-	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	51.1	1.1e-41
WP_000284571.1|402850_404455_+|transposase	IS1182-like element IS1182 family transposase	transposase	A0ZS58	Staphylococcus_virus	44.4	1.1e-128
WP_000802831.1|405175_405835_-	RibD family protein	NA	A0A1B0RXM8	Streptococcus_phage	100.0	3.1e-125
WP_072387101.1|405945_406353_-	WYL domain-containing protein	NA	A0A1B0RXM3	Streptococcus_phage	98.3	1.1e-59
WP_001079938.1|406325_406898_-	HTH domain-containing protein	NA	A0A1B0RXM1	Streptococcus_phage	99.5	5.5e-102
WP_001096887.1|407173_407968_-	aminoglycoside O-phosphotransferase APH(3')-IIIa	NA	E4ZFP6	Streptococcus_phage	100.0	2.3e-154
WP_000627289.1|408060_408591_-	streptothricin N-acetyltransferase Sat4	NA	A0A1B0RXL7	Streptococcus_phage	97.8	1.3e-89
WP_001255866.1|408587_409496_-	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NA	E4ZFP8	Streptococcus_phage	100.0	2.8e-177
WP_000662263.1|409528_410263_-	class I SAM-dependent methyltransferase	NA	A0A1X9I6N4	Streptococcus_phage	100.0	1.5e-141
WP_000228166.1|410243_411113_-	nucleotidyltransferase domain-containing protein	NA	A0A1X9I6C9	Streptococcus_phage	95.8	4.3e-159
WP_000567888.1|411215_411461_-	single-stranded DNA-binding protein	NA	NA	NA	NA	NA
WP_000284571.1|411586_413191_-|transposase	IS1182-like element IS1182 family transposase	transposase	A0ZS58	Staphylococcus_virus	44.4	1.1e-128
>prophage 3
NC_021670	Staphylococcus aureus, complete sequence	2980548	448896	464909	2980548	integrase	Streptococcus_phage(78.57%)	15	444804:444818	460733:460747
444804:444818	attL	GATTCATCATTTGAC	NA	NA	NA	NA
WP_000264071.1|448896_450363_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.5	5.2e-96
WP_000424966.1|450387_451929_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	32.6	1.2e-23
WP_000237797.1|451996_453190_-|integrase	site-specific integrase	integrase	A0A0S2MV79	Bacillus_phage	34.2	8.3e-44
WP_000633907.1|453216_453417_-	DUF3173 domain-containing protein	NA	NA	NA	NA	NA
WP_000845143.1|453914_454145_-	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	78.9	1.0e-27
WP_000804879.1|454141_454564_-	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	68.6	7.5e-48
WP_001227350.1|455094_455448_+	helix-turn-helix domain-containing protein	NA	A0A1S5SFA6	Streptococcus_phage	89.7	2.2e-53
WP_032506803.1|455505_455694_-	cysteine-rich KTR domain-containing protein	NA	D0R0F6	Streptococcus_phage	61.4	7.4e-16
WP_001817446.1|455791_456832_-	hypothetical protein	NA	A0A1S5SF82	Streptococcus_phage	95.7	3.6e-192
WP_001817445.1|456843_457710_-	GTP-binding protein	NA	A0A1S5SF82	Streptococcus_phage	99.0	9.6e-159
WP_000584387.1|458087_459017_-	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	56.6	1.1e-83
WP_000768373.1|459033_460056_-	bifunctional lysozyme/C40 family peptidase	NA	A0A1S5SEZ8	Streptococcus_phage	75.5	2.4e-132
WP_000192392.1|460052_462080_-	membrane protein	NA	A0A1S5SF30	Streptococcus_phage	65.5	2.3e-195
460733:460747	attR	GATTCATCATTTGAC	NA	NA	NA	NA
WP_000331168.1|462076_464530_-	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	78.8	0.0e+00
WP_000723887.1|464513_464909_-	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	72.6	5.9e-47
>prophage 4
NC_021670	Staphylococcus aureus, complete sequence	2980548	468061	476228	2980548		Streptococcus_phage(85.71%)	10	NA	NA
WP_000870467.1|468061_468556_-	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	63.4	2.8e-54
WP_000675717.1|468622_469402_-	abortive infection family protein	NA	NA	NA	NA	NA
WP_001009054.1|469443_469665_-	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	93.2	3.1e-29
WP_000055376.1|469661_469952_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020444628.1|469948_471133_-	replication initiation factor domain-containing protein	NA	A0A1S5SEX3	Streptococcus_phage	67.9	1.2e-159
WP_001130245.1|471314_472718_-	DUF87 domain-containing protein	NA	A0A1S5SFB5	Streptococcus_phage	66.7	7.5e-177
WP_000185761.1|472739_473513_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001234191.1|473522_473900_-	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	76.4	9.6e-47
WP_000421279.1|473920_474235_-	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	77.7	1.2e-42
WP_000181735.1|474434_476228_-	ATP-dependent helicase	NA	E3T5J8	Cafeteria_roenbergensis_virus	23.8	6.9e-26
>prophage 5
NC_021670	Staphylococcus aureus, complete sequence	2980548	808305	813967	2980548	transposase	Streptococcus_virus(16.67%)	6	NA	NA
WP_001062972.1|808305_809019_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_000941336.1|809022_809442_-	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_000446724.1|809443_810112_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000284571.1|810300_811905_-|transposase	IS1182-like element IS1182 family transposase	transposase	A0ZS58	Staphylococcus_virus	44.4	1.1e-128
WP_000604514.1|812238_812832_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	4.4e-38
WP_001217785.1|812815_813967_+	anthranilate synthase component I family protein	NA	A0A0B5J984	Pandoravirus	35.7	1.6e-23
>prophage 6
NC_021670	Staphylococcus aureus, complete sequence	2980548	828570	842518	2980548	transposase	uncultured_Caudovirales_phage(50.0%)	13	NA	NA
WP_000429014.1|828570_829488_-	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	3.7e-07
WP_001790641.1|829578_829680_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000284571.1|829819_831424_+|transposase	IS1182-like element IS1182 family transposase	transposase	A0ZS58	Staphylococcus_virus	44.4	1.1e-128
WP_000193751.1|831549_833055_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_000930014.1|833395_833896_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
WP_001068497.1|833915_834782_-	DMT family transporter	NA	NA	NA	NA	NA
WP_000692521.1|835582_835981_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_000855505.1|835943_838049_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000562498.1|838166_839138_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000499195.1|839651_839807_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000876318.1|839845_840817_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
WP_001245577.1|840803_841760_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
WP_000616842.1|841756_842518_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	8.5e-18
>prophage 7
NC_021670	Staphylococcus aureus, complete sequence	2980548	925027	936984	2980548	coat,integrase,terminase	Staphylococcus_phage(86.67%)	19	924866:924884	939272:939290
924866:924884	attL	AGTTATTCCTGCTAAATAA	NA	NA	NA	NA
WP_020444648.1|925027_926248_-|integrase	site-specific integrase	integrase	Q4ZE80	Staphylococcus_phage	47.5	8.4e-100
WP_001637664.1|926261_927650_-	SAP domain-containing protein	NA	NA	NA	NA	NA
WP_001186979.1|927676_928249_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000560872.1|928420_928642_+	helix-turn-helix transcriptional regulator	NA	A0A2H4JFN1	uncultured_Caudovirales_phage	43.5	2.0e-07
WP_000124597.1|928642_928915_+	helix-turn-helix domain-containing protein	NA	Q4ZE77	Staphylococcus_phage	84.4	7.7e-38
WP_000784891.1|928926_929082_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001231375.1|929066_929270_+	hypothetical protein	NA	A0A1W6JQF4	Staphylococcus_phage	100.0	1.0e-31
WP_020444649.1|929271_929655_+	hypothetical protein	NA	A0A1W6JQI7	Staphylococcus_phage	89.0	4.4e-55
WP_001103955.1|929655_929976_+	DUF1474 family protein	NA	Q4ZE75	Staphylococcus_phage	51.9	2.6e-21
WP_001002711.1|930040_930910_+	primase alpha helix C-terminal domain-containing protein	NA	Q4ZE74	Staphylococcus_phage	96.5	9.0e-165
WP_000447459.1|930923_932633_+	DUF927 domain-containing protein	NA	Q4ZE73	Staphylococcus_phage	96.1	0.0e+00
WP_000356938.1|932962_933343_+	hypothetical protein	NA	Q4ZE71	Staphylococcus_phage	97.6	2.0e-68
WP_001019777.1|933339_933981_+	hypothetical protein	NA	Q4ZE67	Staphylococcus_phage	94.4	5.3e-114
WP_001190598.1|934328_934670_+	hypothetical protein	NA	Q4ZE66	Staphylococcus_phage	98.2	3.2e-57
WP_000846290.1|934681_935260_+	hypothetical protein	NA	A0A2H4JBG0	uncultured_Caudovirales_phage	39.5	1.3e-29
WP_000448775.1|935277_935496_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000771358.1|935546_936074_+|coat	spore coat protein	coat	Q4ZE87	Staphylococcus_phage	97.7	5.8e-90
WP_025174984.1|936205_936418_+	hypothetical protein	NA	Q4ZE86	Staphylococcus_phage	97.1	3.2e-31
WP_001281786.1|936414_936984_+|terminase	terminase small subunit	terminase	A0A1W6JQF0	Staphylococcus_phage	98.4	1.2e-101
939272:939290	attR	AGTTATTCCTGCTAAATAA	NA	NA	NA	NA
>prophage 8
NC_021670	Staphylococcus aureus, complete sequence	2980548	1028993	1082767	2980548	protease,tRNA,bacteriocin	Streptococcus_phage(33.33%)	52	NA	NA
WP_000448934.1|1028993_1029983_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000258003.1|1030277_1030673_+	transcriptional regulator Spx	NA	NA	NA	NA	NA
WP_001217730.1|1031042_1031762_+	adaptor protein MecA	NA	NA	NA	NA	NA
WP_000082731.1|1032915_1034724_+	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	24.4	9.3e-47
WP_000896697.1|1035183_1035990_-|protease	protease adaptor protein YjbH	protease	NA	NA	NA	NA
WP_000214065.1|1036012_1036378_-	truncated hemoglobin	NA	NA	NA	NA	NA
WP_000224622.1|1036481_1037075_-	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_001242102.1|1037260_1037608_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001077683.1|1037624_1038260_+	GTP pyrophosphokinase family protein	NA	NA	NA	NA	NA
WP_001270834.1|1038276_1039086_+	NAD kinase	NA	NA	NA	NA	NA
WP_000669939.1|1039082_1039937_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_000062417.1|1039957_1041343_+	magnesium transporter	NA	NA	NA	NA	NA
WP_000395153.1|1041352_1043197_+	monovalent cation:proton antiporter family protein	NA	NA	NA	NA	NA
WP_000933195.1|1043474_1044245_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_000933105.1|1044439_1045525_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_000570698.1|1045866_1047435_+	alanine:cation symporter family protein	NA	NA	NA	NA	NA
WP_001288681.1|1047576_1048335_+	esterase family protein	NA	NA	NA	NA	NA
WP_000600392.1|1048528_1049038_+	2'-5' RNA ligase family protein	NA	NA	NA	NA	NA
WP_001154222.1|1049150_1050341_-	MFS transporter	NA	NA	NA	NA	NA
WP_000258650.1|1050318_1051494_-	diglucosyl diacylglycerol synthase	NA	NA	NA	NA	NA
WP_000340118.1|1051926_1053408_+	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	NA	NA	NA	NA	NA
WP_001795833.1|1053391_1053652_+	YueH family protein	NA	NA	NA	NA	NA
WP_001049959.1|1053651_1055214_+	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	28.2	4.9e-36
WP_000928413.1|1055515_1056319_+	TerC family protein	NA	S5MAL1	Bacillus_phage	40.5	1.6e-30
WP_000455278.1|1056537_1058862_+|protease	serine protease	protease	W5SAB9	Pithovirus	27.4	2.8e-11
WP_000021864.1|1058878_1060237_+	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000414177.1|1060375_1061887_+	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
WP_000287265.1|1062373_1062943_-	competence protein ComK	NA	NA	NA	NA	NA
WP_000876826.1|1063152_1063371_+	IDEAL domain-containing protein	NA	NA	NA	NA	NA
WP_000668820.1|1063451_1064438_-	lipoate--protein ligase	NA	NA	NA	NA	NA
WP_000214898.1|1064636_1064813_+	YkvS family protein	NA	NA	NA	NA	NA
WP_001033867.1|1064827_1065430_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_001790623.1|1066346_1066448_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001790097.1|1066457_1066730_+|bacteriocin	lactococcin 972 family bacteriocin	bacteriocin	NA	NA	NA	NA
WP_000870806.1|1066773_1068738_+|bacteriocin	bacteriocin-associated integral membrane family protein	bacteriocin	NA	NA	NA	NA
WP_000668623.1|1068740_1069061_+	YxeA family protein	NA	NA	NA	NA	NA
WP_000571178.1|1069057_1069699_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	2.2e-19
WP_001795544.1|1069786_1070077_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000410720.1|1070355_1070643_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000719184.1|1070648_1072130_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_000766009.1|1072218_1072575_-	DoxX family protein	NA	NA	NA	NA	NA
WP_001081351.1|1073051_1074011_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_001790177.1|1074056_1074188_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000867357.1|1074251_1074467_-	TM2 domain-containing protein	NA	A0A060AN66	Enterococcus_phage	49.1	1.5e-07
WP_000620953.1|1074631_1075183_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000070966.1|1075234_1076173_-	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA	NA
WP_000190623.1|1076354_1077716_+	isochorismate synthase MenF	NA	NA	NA	NA	NA
WP_000526687.1|1077702_1079376_+	2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase	NA	NA	NA	NA	NA
WP_000150195.1|1079362_1080166_+	2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase	NA	NA	NA	NA	NA
WP_000184947.1|1080158_1080980_+	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA	NA
WP_000284457.1|1081218_1081548_-	staphostatin B	NA	NA	NA	NA	NA
WP_001088779.1|1081585_1082767_-|protease	cysteine protease staphopain B	protease	NA	NA	NA	NA
>prophage 9
NC_021670	Staphylococcus aureus, complete sequence	2980548	1102509	1110982	2980548		Synechococcus_phage(33.33%)	9	NA	NA
WP_000861572.1|1102509_1102992_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
WP_001010412.1|1102978_1104103_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000174053.1|1104106_1104811_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
WP_000848350.1|1104810_1105074_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000666799.1|1105075_1105747_+	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_000032727.1|1105739_1107929_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.7	1.0e-140
WP_000483713.1|1107907_1109392_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	3.2e-45
WP_000030812.1|1109384_1110413_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.4	1.3e-61
WP_000238664.1|1110415_1110982_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	6.1e-29
>prophage 10
NC_021670	Staphylococcus aureus, complete sequence	2980548	1162639	1250064	2980548	protease,tail,capsid,plate,tRNA,portal,terminase,holin,head	Staphylococcus_phage(72.15%)	110	NA	NA
WP_000401377.1|1162639_1163122_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	46.2	2.6e-28
WP_000843611.1|1163183_1164323_-	nucleotidyltransferase	NA	NA	NA	NA	NA
WP_000872158.1|1164449_1165007_+	DUF177 domain-containing protein	NA	NA	NA	NA	NA
WP_000290472.1|1165086_1165260_+	50S ribosomal protein L32	NA	NA	NA	NA	NA
WP_000861313.1|1165376_1166762_-	recombinase family protein	NA	I1W625	Staphylococcus_phage	100.0	2.5e-265
WP_000392109.1|1166969_1167650_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	A0A2H4PQQ5	Staphylococcus_phage	100.0	5.1e-123
WP_000661437.1|1167681_1168407_-	PH domain-containing protein	NA	A0A0F6N4L7	Staphylococcus_phage	100.0	9.9e-125
WP_000775187.1|1168434_1169109_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A0F6N3H6	Staphylococcus_phage	100.0	4.9e-126
WP_001055143.1|1169125_1169458_-	helix-turn-helix transcriptional regulator	NA	R4IH08	Staphylococcus_phage	100.0	4.1e-57
WP_000108122.1|1169720_1169915_+	helix-turn-helix transcriptional regulator	NA	A0A0F6N3M9	Staphylococcus_phage	100.0	1.1e-25
WP_001002760.1|1169914_1170679_+	phage antirepressor Ant	NA	R4IFK0	Staphylococcus_phage	99.6	2.7e-141
WP_000390104.1|1170695_1170890_+	hypothetical protein	NA	E9LT75	Staphylococcus_phage	98.4	7.9e-29
WP_000933363.1|1171326_1171512_+	helix-turn-helix transcriptional regulator	NA	S4SUN2	Staphylococcus_phage	100.0	1.7e-25
WP_001148618.1|1171513_1172266_+	phage antirepressor KilAC domain-containing protein	NA	A0A1X9H0A0	Staphylococcus_phage	100.0	8.7e-140
WP_164799709.1|1172281_1172458_+	hypothetical protein	NA	S4SVC9	Staphylococcus_phage	96.6	8.2e-25
WP_000395457.1|1172432_1172663_-	hypothetical protein	NA	R4IG40	Staphylococcus_phage	100.0	2.3e-35
WP_000066026.1|1172842_1173004_+	DUF1270 family protein	NA	C8CGY5	Staphylococcus_phage	100.0	2.5e-20
WP_000291089.1|1173097_1173358_+	DUF1108 family protein	NA	Q4ZBM7	Staphylococcus_phage	100.0	1.2e-43
WP_001004336.1|1173370_1173907_+	host-nuclease inhibitor Gam family protein	NA	A0A0F6N4M6	Staphylococcus_phage	100.0	1.4e-80
WP_020444661.1|1173907_1174555_+	ERF family protein	NA	A0A0F6N3I5	Staphylococcus_phage	96.7	2.2e-115
WP_023180131.1|1174554_1174971_+	single-stranded DNA-binding protein	NA	G4KNN8	Staphylococcus_phage	83.7	7.1e-59
WP_020444663.1|1174984_1175659_+	hypothetical protein	NA	A0A1X9H0A9	Staphylococcus_phage	97.3	3.8e-126
WP_016028252.1|1175768_1176428_-	hypothetical protein	NA	E0Y3Q0	Staphylococcus_virus	100.0	1.4e-120
WP_000190226.1|1176473_1177244_+	conserved phage C-terminal domain-containing protein	NA	A0A2H4PQI2	Staphylococcus_phage	100.0	2.4e-116
WP_020444664.1|1177253_1178027_+	ATP-binding protein	NA	Q4ZAS1	Staphylococcus_virus	97.7	1.1e-140
WP_001123688.1|1178193_1178415_+	DUF3269 family protein	NA	Q9G021	Staphylococcus_phage	100.0	1.3e-35
WP_000451861.1|1178424_1178850_+	phage N-6-adenine-methyltransferase	NA	C8CGZ6	Staphylococcus_phage	100.0	4.7e-82
WP_000049780.1|1178846_1179251_+	DUF1064 domain-containing protein	NA	Q4ZAR7	Staphylococcus_virus	100.0	1.5e-66
WP_001187239.1|1179255_1179441_+	DUF3113 family protein	NA	Q4ZAR6	Staphylococcus_virus	100.0	2.4e-27
WP_031782732.1|1179804_1180059_+	DUF3310 domain-containing protein	NA	A0A2I6PEN5	Staphylococcus_phage	96.4	2.4e-41
WP_072466103.1|1180058_1180307_+	hypothetical protein	NA	M9NTB1	Staphylococcus_phage	98.8	8.8e-41
WP_020444668.1|1180319_1180724_+	hypothetical protein	NA	A0A0E3T8H9	Staphylococcus_phage	96.2	2.5e-69
WP_000979209.1|1180720_1181068_+	hypothetical protein	NA	D2JGL4	Staphylococcus_phage	100.0	5.9e-59
WP_001668981.1|1181064_1181373_+	hypothetical protein	NA	Q4ZBK6	Staphylococcus_phage	100.0	1.8e-51
WP_031782730.1|1181365_1181614_+	DUF1024 family protein	NA	A0A068A237	Staphylococcus_phage	97.6	2.7e-37
WP_001209219.1|1182177_1182351_+	hypothetical protein	NA	S4SVD5	Staphylococcus_phage	100.0	3.6e-25
WP_000195789.1|1182367_1182556_+	DUF1381 domain-containing protein	NA	A0A2I6PF34	Staphylococcus_phage	100.0	2.3e-25
WP_001125015.1|1182530_1182731_+	hypothetical protein	NA	A0A2I6PF22	Staphylococcus_phage	100.0	1.8e-28
WP_000237866.1|1182733_1182886_+	transcriptional activator RinB	NA	A0A2I6PF16	Staphylococcus_phage	98.0	5.8e-19
WP_000265258.1|1182953_1183154_+	DUF1514 family protein	NA	A0A2I6PF41	Staphylococcus_phage	100.0	2.9e-26
WP_020444670.1|1183205_1185653_+	virulence-associated E family protein	NA	Q4ZCG0	Staphylococcus_virus	99.3	0.0e+00
WP_011447017.1|1185755_1185860_-	hypothetical protein	NA	Q4ZCF8	Staphylococcus_virus	100.0	9.4e-13
WP_000665203.1|1185993_1186284_+	VRR-NUC domain-containing protein	NA	A0A2I6PEN7	Staphylococcus_phage	100.0	6.5e-51
WP_078066180.1|1186264_1187632_+	DEAD/DEAH box helicase	NA	Q4ZCM9	Staphylococcus_virus	99.1	1.6e-261
WP_000513704.1|1187644_1188082_+	transcriptional regulator	NA	A0A2K9VBV2	Staphylococcus_phage	100.0	6.1e-77
WP_000166257.1|1188242_1188563_+	HNH endonuclease	NA	A0A2K9VBV6	Staphylococcus_phage	86.8	4.6e-50
WP_020444673.1|1188688_1188994_+|terminase	P27 family phage terminase small subunit	terminase	U5U414	Staphylococcus_phage	99.0	8.3e-49
WP_020444674.1|1188983_1190675_+|terminase	terminase large subunit	terminase	A0A2K9VBQ1	Staphylococcus_phage	99.5	0.0e+00
WP_020444675.1|1190679_1191918_+|portal	phage portal protein	portal	A0A2I6PF26	Staphylococcus_phage	98.1	2.7e-231
WP_021187674.1|1191901_1192675_+|protease	Clp protease ClpP	protease	A0A2I6PEQ7	Staphylococcus_phage	98.4	5.1e-135
WP_001142735.1|1192686_1193850_+|capsid	phage major capsid protein	capsid	A0A2I6PE62	Staphylococcus_phage	100.0	3.6e-217
WP_000050975.1|1193918_1194197_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2I6PE36	Staphylococcus_phage	100.0	2.1e-46
WP_000395501.1|1194208_1194541_+	hypothetical protein	NA	A0A2I6PDD6	Staphylococcus_phage	100.0	6.2e-58
WP_000110020.1|1194537_1194939_+	hypothetical protein	NA	A0A2I6PDD3	Staphylococcus_phage	100.0	6.2e-68
WP_001023802.1|1194939_1195335_+	DUF3168 domain-containing protein	NA	A0A2I6PDD8	Staphylococcus_phage	100.0	2.6e-66
WP_000807540.1|1195369_1196011_+|tail	tail protein	tail	A0A2I6PE59	Staphylococcus_phage	100.0	1.0e-120
WP_020444677.1|1196102_1196558_+	Ig domain-containing protein	NA	A0A2I6PER6	Staphylococcus_phage	99.3	9.7e-78
WP_000589166.1|1196615_1196957_+	hypothetical protein	NA	A0A2I6PEQ2	Staphylococcus_phage	100.0	1.5e-54
WP_000438833.1|1197007_1197166_+	hypothetical protein	NA	A0A2I6PES8	Staphylococcus_phage	100.0	1.2e-19
WP_020444678.1|1197179_1203380_+|tail	phage tail tape measure protein	tail	Q4ZCL0	Staphylococcus_virus	99.7	0.0e+00
WP_020444679.1|1203379_1204204_+|tail	phage tail family protein	tail	A0A2I6PER3	Staphylococcus_phage	99.6	1.2e-158
WP_000384462.1|1204212_1205796_+|tail	phage tail protein	tail	Q8SDP1	Staphylococcus_virus	100.0	7.1e-309
WP_000179860.1|1205795_1206086_+	hypothetical protein	NA	A0A2I6PF46	Staphylococcus_phage	100.0	2.1e-49
WP_000429552.1|1206101_1208012_+	hypothetical protein	NA	A0A2K9VBU3	Staphylococcus_phage	100.0	0.0e+00
WP_020444680.1|1208011_1209478_+|plate	phage baseplate upper protein	plate	A0A2I6PDE3	Staphylococcus_phage	99.6	3.1e-274
WP_001166599.1|1209477_1209867_+	DUF2977 domain-containing protein	NA	A0A2I6PER1	Staphylococcus_phage	100.0	2.2e-62
WP_000916020.1|1209859_1210024_+	XkdX family protein	NA	A0A2I6PES4	Staphylococcus_phage	100.0	4.9e-24
WP_000466784.1|1210069_1210369_+	DUF2951 domain-containing protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
WP_000339141.1|1210504_1210807_+|holin	phage holin	holin	A0A2I6PF56	Staphylococcus_phage	100.0	3.1e-48
WP_020444681.1|1210817_1212272_+	N-acetylmuramoyl-L-alanine amidase	NA	B7T0L1	Staphylococcus_virus	98.8	1.0e-285
WP_000528632.1|1212996_1213554_+	hypothetical protein	NA	W5R8Q1	Staphylococcus_phage	100.0	5.7e-104
WP_000470336.1|1213829_1214015_+	hypothetical protein	NA	A0ZS61	Staphylococcus_virus	100.0	1.7e-25
WP_000476873.1|1214105_1215023_+	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_020444682.1|1215080_1216019_+	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_001033757.1|1216011_1216218_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000913219.1|1216232_1217147_+	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_001789947.1|1217345_1217465_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001186912.1|1217743_1218289_+	ECF transporter S component	NA	NA	NA	NA	NA
WP_001151997.1|1218394_1218643_-	ferredoxin	NA	A0A127AYY7	Bacillus_phage	48.0	8.3e-15
WP_001163801.1|1218750_1219704_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_000902119.1|1219693_1221073_+	ATP-dependent DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	33.6	2.9e-56
WP_000069282.1|1221225_1222686_+	elastin-binding protein EbpS	NA	NA	NA	NA	NA
WP_001789943.1|1222810_1222927_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001174260.1|1223087_1224074_+	YpdA family putative bacillithiol disulfide reductase	NA	NA	NA	NA	NA
WP_000681758.1|1224188_1225157_-	asparaginase	NA	NA	NA	NA	NA
WP_000644391.1|1225233_1225893_+	(d)CMP kinase	NA	NA	NA	NA	NA
WP_001789945.1|1225923_1226040_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001789944.1|1226156_1226348_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000133954.1|1226604_1227780_+	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_000165530.1|1228001_1229312_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_000161738.1|1229328_1230327_+	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_001043863.1|1230497_1230770_+	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	73.3	4.2e-28
WP_020444684.1|1231200_1231773_+	heptaprenyl diphosphate synthase component 1	NA	NA	NA	NA	NA
WP_000774684.1|1231775_1232501_+	demethylmenaquinone methyltransferase	NA	NA	NA	NA	NA
WP_001096471.1|1232502_1233462_+	polyprenyl synthetase family protein	NA	A0A1V0SE37	Indivirus	24.4	1.3e-10
WP_000442480.1|1233553_1234003_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.8	2.4e-28
WP_000789522.1|1234211_1234412_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001269929.1|1234797_1235964_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	32.1	7.6e-34
WP_000776323.1|1235989_1237054_+	3-dehydroquinate synthase	NA	NA	NA	NA	NA
WP_000245895.1|1237063_1238362_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_000389524.1|1238368_1239613_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000004947.1|1239626_1240202_+	YpiB family protein	NA	G3MAV7	Bacillus_virus	27.2	2.7e-08
WP_000152734.1|1240191_1240779_+	DUF1405 domain-containing protein	NA	NA	NA	NA	NA
WP_001827022.1|1240850_1241531_+	zinc metallopeptidase	NA	NA	NA	NA	NA
WP_000839926.1|1241867_1242185_+	nucleotide pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_000690027.1|1242425_1243568_+	N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA	NA	NA	NA	NA	NA
WP_000361544.1|1243572_1244775_+|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	42.5	3.2e-35
WP_000049919.1|1244761_1245733_+	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_000525078.1|1245756_1248450_+	ATP-dependent helicase DinG	NA	A0A1X9I5C8	Streptococcus_phage	34.4	8.2e-47
WP_000858789.1|1248771_1250064_+|tRNA	asparagine--tRNA ligase	tRNA	A0A2P1EMB4	Moumouvirus	30.0	1.9e-54
>prophage 11
NC_021670	Staphylococcus aureus, complete sequence	2980548	1627737	1687752	2980548	tail,capsid,tRNA,portal,terminase,integrase,holin,head,plate	Staphylococcus_phage(85.71%)	75	1633339:1633354	1683781:1683796
WP_000908982.1|1627737_1630140_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_000003559.1|1630139_1631198_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2I2L4E3	Orpheovirus	35.5	1.9e-31
WP_000435374.1|1631578_1632319_-	RNA methyltransferase	NA	NA	NA	NA	NA
WP_001788617.1|1632558_1632666_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000670950.1|1632702_1633026_-	staphylobilin-forming heme oxygenase IsdG	NA	NA	NA	NA	NA
WP_001242429.1|1633044_1633779_-	class B sortase	NA	NA	NA	NA	NA
1633339:1633354	attL	TTGCTTTAAATAATCT	NA	NA	NA	NA
WP_000594530.1|1633840_1634806_-	hemin ABC transporter permease protein IsdF	NA	NA	NA	NA	NA
WP_001220199.1|1634818_1635697_-	heme ABC transporter substrate-binding protein IsdE	NA	NA	NA	NA	NA
WP_001246698.1|1635693_1636770_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000789821.1|1636769_1637453_-	heme uptake protein IsdC	NA	NA	NA	NA	NA
WP_000160859.1|1637661_1638714_+	LPXTG-anchored heme-scavenging protein IsdA	NA	NA	NA	NA	NA
WP_001041586.1|1638916_1640854_+	heme uptake protein IsdB	NA	NA	NA	NA	NA
WP_001148135.1|1641585_1643031_-	SH3 domain-containing protein	NA	Q4ZB16	Staphylococcus_virus	100.0	4.8e-296
WP_000354128.1|1643011_1643449_-|holin	phage holin	holin	S4SVG2	Staphylococcus_phage	99.3	4.1e-73
WP_000387943.1|1643503_1643899_-	hypothetical protein	NA	A0A0H4IPB8	Staphylococcus_phage	97.7	8.8e-67
WP_020444708.1|1643903_1645142_-|plate	BppU family phage baseplate upper protein	plate	Q4ZB96	Staphylococcus_virus	97.6	8.8e-206
WP_001604150.1|1645154_1647029_-	glucosaminidase domain-containing protein	NA	A0A0H3U444	Staphylococcus_phage	100.0	0.0e+00
WP_000466769.1|1647165_1647465_-	DUF2951 domain-containing protein	NA	Q4ZBP8	Staphylococcus_phage	100.0	1.3e-46
WP_078066190.1|1647505_1647679_-	XkdX family protein	NA	Q8LTH6	Staphylococcus_phage	98.2	3.9e-27
WP_000705893.1|1647688_1648066_-	DUF2977 domain-containing protein	NA	Q8LTH7	Staphylococcus_phage	100.0	7.3e-55
WP_020444709.1|1648065_1649889_-|plate	BppU family phage baseplate upper protein	plate	B1H3M3	Staphylococcus_phage	99.3	0.0e+00
WP_015988680.1|1649888_1651787_-	hypothetical protein	NA	A9CRC4	Staphylococcus_phage	100.0	0.0e+00
WP_020444710.1|1651799_1653683_-|tail	phage tail protein	tail	A0A0H4ITY6	Staphylococcus_phage	99.8	0.0e+00
WP_000560199.1|1653693_1654629_-|tail	phage tail family protein	tail	A0A0H4J355	Staphylococcus_phage	100.0	4.8e-180
WP_020444711.1|1654643_1657613_-|tail	phage tail protein	tail	Q4ZAG7	Staphylococcus_virus	99.4	2.5e-262
WP_000204079.1|1657615_1657957_-	hypothetical protein	NA	W5R8J4	Staphylococcus_phage	100.0	3.5e-56
WP_000141084.1|1657977_1658472_-	hypothetical protein	NA	A0A0H4IPX9	Staphylococcus_phage	100.0	2.5e-87
WP_000046067.1|1658533_1659094_-	hypothetical protein	NA	A0A0H4ITY2	Staphylococcus_phage	100.0	5.9e-101
WP_000270194.1|1659080_1659518_-	DUF3168 domain-containing protein	NA	A0A0H4J350	Staphylococcus_phage	100.0	7.9e-77
WP_001151336.1|1659530_1659944_-	HK97 gp10 family phage protein	NA	A0A0H4IPA6	Staphylococcus_phage	100.0	3.4e-77
WP_000482988.1|1659930_1660266_-|head	phage head closure protein	head	A0A0H4ISR6	Staphylococcus_phage	100.0	1.0e-60
WP_000338934.1|1660258_1660573_-|head,tail	phage head-tail connector protein	head,tail	A0A0H4IPX4	Staphylococcus_phage	100.0	2.6e-53
WP_000278802.1|1660572_1660899_-	Rho termination factor N-terminal domain-containing protein	NA	A0A0H4ITX8	Staphylococcus_phage	100.0	1.2e-50
WP_001135533.1|1660915_1661740_-|capsid	N4-gp56 family major capsid protein	capsid	A0A0H4J347	Staphylococcus_phage	100.0	4.3e-148
WP_000366936.1|1661760_1662357_-	phage scaffolding protein	NA	A0A0H4IP83	Staphylococcus_phage	100.0	5.7e-102
WP_051134149.1|1662454_1663435_-|head	phage head morphogenesis protein	head	Q4ZAW9	Staphylococcus_virus	98.5	1.2e-178
WP_001159670.1|1663373_1664852_-|portal	phage portal protein	portal	Q4ZB45	Staphylococcus_virus	99.4	1.3e-283
WP_001807202.1|1664805_1666014_-|terminase	PBSX family phage terminase large subunit	terminase	A0A0H4ITX6	Staphylococcus_phage	100.0	1.0e-235
WP_000594085.1|1666006_1666501_-	hypothetical protein	NA	A0A0H4J343	Staphylococcus_phage	100.0	8.4e-83
WP_000286968.1|1666851_1667253_-	hypothetical protein	NA	A0A2H4PQK5	Staphylococcus_phage	100.0	5.6e-69
WP_015988676.1|1667253_1667427_-	transcriptional activator RinB	NA	A9CR97	Staphylococcus_phage	100.0	3.4e-23
WP_020444715.1|1667419_1667656_-	hypothetical protein	NA	A7TWB3	Staphylococcus_phage	98.7	5.6e-37
WP_020444716.1|1667680_1667917_-	DUF1381 domain-containing protein	NA	C8CH06	Staphylococcus_phage	97.4	9.0e-35
WP_031782730.1|1668480_1668729_-	DUF1024 family protein	NA	A0A068A237	Staphylococcus_phage	97.6	2.7e-37
WP_001668981.1|1668721_1669030_-	hypothetical protein	NA	Q4ZBK6	Staphylococcus_phage	100.0	1.8e-51
WP_000979209.1|1669026_1669374_-	hypothetical protein	NA	D2JGL4	Staphylococcus_phage	100.0	5.9e-59
WP_020444718.1|1669370_1669751_-	hypothetical protein	NA	A0A0E3T8H9	Staphylococcus_phage	96.0	1.6e-65
WP_072466103.1|1669786_1670035_-	hypothetical protein	NA	M9NTB1	Staphylococcus_phage	98.8	8.8e-41
WP_031782732.1|1670034_1670289_-	DUF3310 domain-containing protein	NA	A0A2I6PEN5	Staphylococcus_phage	96.4	2.4e-41
WP_031782733.1|1670288_1670690_-	phage DNA polymerase	NA	A0A2I6PF14	Staphylococcus_phage	99.2	3.6e-68
WP_001164629.1|1670689_1670875_-	DUF3113 family protein	NA	A0A2I6PEM8	Staphylococcus_phage	100.0	7.0e-27
WP_001796208.1|1670887_1672840_-	DNA polymerase	NA	A0A2I6PF18	Staphylococcus_phage	100.0	0.0e+00
WP_000645042.1|1672908_1673466_-	DUF2815 family protein	NA	A0A2I6PF05	Staphylococcus_phage	100.0	1.8e-97
WP_000762547.1|1673491_1674658_-	DUF2800 domain-containing protein	NA	A0A2D1G5B8	Staphylococcus_phage	100.0	8.3e-222
WP_000985984.1|1674654_1675017_-	hypothetical protein	NA	Q4ZCP8	Staphylococcus_virus	99.2	1.4e-55
WP_000175001.1|1675031_1675355_-	hypothetical protein	NA	A0A2I6PDL5	Staphylococcus_phage	99.1	1.7e-52
WP_001285954.1|1675433_1675595_-	DUF1270 domain-containing protein	NA	A7TWM3	Staphylococcus_phage	100.0	8.6e-21
WP_001124160.1|1675607_1675871_-	helix-turn-helix domain-containing protein	NA	A7TWG0	Staphylococcus_phage	100.0	5.7e-46
WP_001097552.1|1675895_1676111_-	hypothetical protein	NA	A0A2I6PF01	Staphylococcus_phage	100.0	1.9e-31
WP_001128433.1|1676165_1676531_+	hypothetical protein	NA	A0A2I6PF07	Staphylococcus_phage	100.0	2.4e-63
WP_001025401.1|1676499_1676745_-	DUF2829 domain-containing protein	NA	A0A2I6PF15	Staphylococcus_phage	100.0	5.1e-41
WP_000642492.1|1676800_1677010_+	hypothetical protein	NA	W5R9J5	Staphylococcus_phage	100.0	1.2e-30
WP_000939498.1|1676999_1677143_-	hypothetical protein	NA	W5R8I6	Staphylococcus_phage	100.0	2.5e-16
WP_001148544.1|1677171_1677948_-	Rha family transcriptional regulator	NA	A0A2I6PD87	Staphylococcus_phage	100.0	1.1e-140
WP_001121027.1|1677961_1678198_-	helix-turn-helix transcriptional regulator	NA	A0A2I6PD81	Staphylococcus_phage	100.0	1.5e-37
WP_000333630.1|1678349_1678664_+	helix-turn-helix transcriptional regulator	NA	A0A0N9BAW4	Staphylococcus_phage	100.0	9.8e-53
WP_000525004.1|1678676_1679138_+	hypothetical protein	NA	A0A2K9VBR7	Staphylococcus_phage	100.0	1.2e-83
WP_000825948.1|1679155_1679740_+	hypothetical protein	NA	A0A2I6PD77	Staphylococcus_phage	100.0	1.4e-68
WP_001013104.1|1679969_1680116_+	hypothetical protein	NA	A0A2I6PEK8	Staphylococcus_phage	89.6	1.1e-14
WP_000191459.1|1680112_1680727_-	hypothetical protein	NA	A7TW88	Staphylococcus_phage	100.0	7.9e-107
WP_020444721.1|1680852_1682058_+|integrase	site-specific integrase	integrase	A0A2I6PEN0	Staphylococcus_phage	99.8	1.7e-222
WP_001566047.1|1682100_1684128_-	hypothetical protein	NA	B5WZK7	Staphylococcus_phage	97.7	6.9e-115
1683781:1683796	attR	TTGCTTTAAATAATCT	NA	NA	NA	NA
WP_001548912.1|1684120_1685050_-	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_000987769.1|1685294_1687046_-	two-component system sensor histidine kinase SrrB	NA	A0A1V0SGX0	Hokovirus	33.6	1.7e-21
WP_000064078.1|1687026_1687752_-	two-component system response regulator SrrA	NA	W8CYM9	Bacillus_phage	43.0	3.5e-45
>prophage 12
NC_021670	Staphylococcus aureus, complete sequence	2980548	1742876	1751188	2980548	tRNA	Staphylococcus_phage(16.67%)	7	NA	NA
WP_001213908.1|1742876_1743662_-	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
WP_000924214.1|1743787_1744678_-	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	33.1	2.0e-26
WP_020444722.1|1744687_1746034_-	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	33.7	4.1e-55
WP_000683931.1|1746147_1747248_-	Nif3-like dinuclear metal center hexameric protein	NA	A0A1S5V250	Saudi_moumouvirus	29.6	5.2e-08
WP_000624584.1|1747250_1747928_-|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_001283055.1|1748058_1749165_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
WP_001217261.1|1749388_1751188_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.0	4.6e-54
>prophage 13
NC_021670	Staphylococcus aureus, complete sequence	2980548	1798819	1860151	2980548	protease,tRNA,transposase,integrase	uncultured_Mediterranean_phage(16.67%)	57	1812352:1812370	1860611:1860629
WP_000734064.1|1798819_1801450_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	34.4	3.2e-64
WP_001283311.1|1801792_1804270_-	ATP-dependent RecD-like DNA helicase	NA	A0A0K2FLP8	Brevibacillus_phage	29.0	1.1e-66
WP_000567028.1|1804271_1804940_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_000066097.1|1805401_1806520_-|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_000409167.1|1806520_1807663_-	cysteine desulfurase	NA	A0A1X7QGF3	Faustovirus	29.3	8.3e-33
WP_000985886.1|1807974_1808988_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_000009238.1|1809224_1809371_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000752913.1|1809410_1809593_-	CsbD family protein	NA	NA	NA	NA	NA
WP_000704122.1|1809692_1810115_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_020444725.1|1810199_1811474_+	replication-associated recombination protein A	NA	A0A127AWE7	Bacillus_phage	50.9	3.7e-106
WP_000682646.1|1811634_1812408_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
1812352:1812370	attL	TAAATCTAAACCTTGTTGT	NA	NA	NA	NA
WP_001790559.1|1812407_1812536_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000044799.1|1812868_1814635_-|tRNA	aspartate--tRNA ligase	tRNA	A0A2K9L0E9	Tupanvirus	27.3	1.3e-16
WP_000590826.1|1814650_1815913_-|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_020444726.1|1816373_1817249_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A0N9SGH1	Paenibacillus_phage	33.7	4.7e-12
WP_000869983.1|1817245_1817698_-|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
WP_041205401.1|1817709_1819899_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A2I2L310	Orpheovirus	37.7	6.9e-12
WP_000093392.1|1820337_1820823_-|transposase	IS200/IS605 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	35.4	4.9e-19
WP_000364542.1|1821068_1821587_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
WP_000594993.1|1821608_1823882_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.8	1.2e-62
WP_000749795.1|1824084_1826364_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_001160682.1|1826638_1826899_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_001112045.1|1826917_1828057_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_020444728.1|1828079_1829105_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001005767.1|1829106_1830111_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
WP_000271547.1|1830142_1830745_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_000368902.1|1830758_1831214_-	ACT domain-containing protein	NA	NA	NA	NA	NA
WP_020444729.1|1831226_1832519_-	GTPase ObgE	NA	NA	NA	NA	NA
WP_000916187.1|1832873_1833158_-	50S ribosomal protein L27	NA	NA	NA	NA	NA
WP_016187883.1|1833169_1833490_-|protease	ribosomal-processing cysteine protease Prp	protease	NA	NA	NA	NA
WP_000457385.1|1833495_1833804_-	50S ribosomal protein L21	NA	NA	NA	NA	NA
WP_020444730.1|1833970_1834501_-	rod shape-determining protein MreD	NA	NA	NA	NA	NA
WP_000911041.1|1834500_1835343_-	rod shape-determining protein MreC	NA	NA	NA	NA	NA
WP_000840602.1|1835542_1835662_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001236735.1|1835735_1836209_-	DUF4930 family protein	NA	NA	NA	NA	NA
WP_000025835.1|1836368_1836566_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000171859.1|1836682_1836967_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001092058.1|1837415_1838078_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_010959190.1|1838469_1838529_+	erythromycin resistance leader peptide	NA	NA	NA	NA	NA
WP_020444732.1|1838611_1839343_+	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NA	E4ZFQ0	Streptococcus_phage	47.5	1.9e-51
WP_000361059.1|1840401_1840779_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_078066183.1|1841523_1842678_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_000868132.1|1842674_1843760_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A0A8WIF9	Clostridium_phage	28.3	4.5e-12
WP_000261115.1|1844429_1845137_-	prepilin peptidase	NA	NA	NA	NA	NA
WP_020444733.1|1845406_1846678_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_000425353.1|1846690_1849321_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0S951	Catovirus	40.7	3.7e-153
WP_001001228.1|1849723_1850284_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_001240848.1|1850506_1851580_-	AbrB family transcriptional regulator	NA	NA	NA	NA	NA
WP_001788970.1|1851613_1851715_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001270868.1|1851775_1853062_-	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA	NA
WP_000667126.1|1853109_1854084_-	porphobilinogen synthase	NA	NA	NA	NA	NA
WP_000805950.1|1854086_1854755_-	uroporphyrinogen-III synthase	NA	NA	NA	NA	NA
WP_001230228.1|1854776_1855703_-	hydroxymethylbilane synthase	NA	NA	NA	NA	NA
WP_001157329.1|1855744_1856560_-	cytochrome c biogenesis protein CcsA	NA	NA	NA	NA	NA
WP_000545451.1|1856581_1857928_-|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
WP_000867697.1|1858144_1858735_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
WP_000472302.1|1858888_1860151_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	62.0	5.0e-140
1860611:1860629	attR	TAAATCTAAACCTTGTTGT	NA	NA	NA	NA
>prophage 14
NC_021670	Staphylococcus aureus, complete sequence	2980548	1969543	2041145	2980548	protease,tRNA,transposase	Staphylococcus_phage(96.36%)	71	NA	NA
WP_001549041.1|1969543_1971961_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.2	0.0e+00
WP_001025061.1|1972248_1973430_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	100.0	5.6e-218
WP_000764419.1|1974489_1975053_+	class I SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
WP_000757543.1|1975172_1975574_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000266096.1|1977152_1977980_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_001790712.1|1977982_1978102_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001196354.1|1978213_1979215_+	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.7	9.0e-185
WP_001008551.1|1979336_1979801_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	99.4	5.8e-70
WP_001159024.1|1979813_1980995_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	99.2	1.6e-225
WP_000493892.1|1981005_1981638_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	99.5	1.7e-112
WP_000077344.1|1981644_1982688_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	99.4	6.3e-197
WP_020444739.1|1983168_1984671_-	FAD/NAD(P)-binding protein	NA	A0A2H4PQX2	Staphylococcus_phage	100.0	2.3e-30
WP_000221179.1|1985193_1985508_+	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	100.0	2.0e-53
WP_000989121.1|1985507_1986800_+	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	99.5	5.0e-228
WP_000163235.1|1986817_1987213_+	arsenate reductase (thioredoxin)	NA	A0A2H4PQT9	Staphylococcus_phage	100.0	6.3e-73
WP_001032833.1|1987507_1988362_-	N-acetylglucosaminidase	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_000384171.1|1988637_1988862_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000671052.1|1989060_1989531_+	RNA polymerase sigma factor SigS	NA	A0A2H4PQT5	Staphylococcus_phage	99.4	1.0e-82
WP_001153742.1|1989643_1990087_+	competence protein ComK	NA	NA	NA	NA	NA
WP_001030465.1|1990073_1990517_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	85.0	3.0e-55
WP_001168904.1|1990812_1991448_+|protease	CPBP family intramembrane metalloprotease SdpA	protease	NA	NA	NA	NA
WP_001096494.1|1991887_1992601_-	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
WP_000091445.1|1992860_1993163_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001200542.1|1993418_1993784_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
WP_000623471.1|1993780_1994134_+	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	99.1	1.0e-21
WP_000453320.1|1996958_1997792_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	98.6	9.6e-156
WP_000366154.1|1998003_1998912_-	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	98.7	3.2e-136
WP_000933822.1|1999036_2000230_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.7	1.9e-218
WP_000109906.1|2000600_2002193_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	100.0	0.0e+00
WP_002868962.1|2003186_2003933_-	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.4	7.1e-142
WP_000672014.1|2003937_2004411_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.1	4.7e-83
WP_000718107.1|2004476_2004734_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000778523.1|2004730_2005732_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.6	4.8e-186
WP_000348360.1|2005736_2007215_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.0	2.0e-281
WP_011443643.1|2007373_2007829_-	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	98.6	3.0e-79
WP_020444742.1|2008131_2008782_+	excalibur calcium-binding domain-containing protein	NA	A0A2H4PQM8	Staphylococcus_phage	94.0	1.0e-51
WP_000070653.1|2008862_2009858_+	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	96.4	7.1e-73
WP_000669046.1|2009933_2010560_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	82.7	7.1e-79
WP_000627551.1|2010600_2010945_+	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	92.0	6.3e-53
WP_041205412.1|2011042_2011594_+	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	94.1	1.0e-20
WP_000494956.1|2011811_2012453_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4PQN8	Staphylococcus_phage	93.2	2.6e-76
WP_000809857.1|2012566_2012752_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000375476.1|2012753_2012930_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000070811.1|2012940_2013324_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001549059.1|2013927_2014071_-|transposase	transposase	transposase	A0A2H4PQU1	Staphylococcus_phage	100.0	6.4e-20
WP_001801861.1|2014273_2014369_+	type I toxin-antitoxin system Fst family toxin PepA1	NA	NA	NA	NA	NA
WP_001791893.1|2014491_2014593_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001037045.1|2014940_2015318_-	DUF1433 domain-containing protein	NA	NA	NA	NA	NA
WP_020444746.1|2015838_2019951_-	ATP-binding protein	NA	A0A2H4PQT3	Staphylococcus_phage	100.0	0.0e+00
WP_041205415.1|2020800_2022000_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	99.5	1.0e-227
WP_000028659.1|2021992_2023549_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	99.4	2.3e-288
WP_001791797.1|2023712_2023847_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001038688.1|2023911_2024631_-|protease	serine protease SplF	protease	A0A2H4PQP1	Staphylococcus_phage	100.0	1.1e-131
WP_001038759.1|2024781_2025498_-|protease	serine protease SplE	protease	A0A2H4PQN5	Staphylococcus_phage	100.0	1.1e-131
WP_011447030.1|2025599_2025707_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001038704.1|2025655_2026375_-|protease	serine protease SplD	protease	A0A2H4PQP9	Staphylococcus_phage	99.6	4.6e-130
WP_001038867.1|2026495_2027215_-|protease	serine protease SplC	protease	A0A2H4PQP7	Staphylococcus_phage	99.2	1.2e-130
WP_001039447.1|2027272_2027995_-|protease	serine protease SplB	protease	A0A2H4PQN0	Staphylococcus_phage	99.6	2.4e-131
WP_001039435.1|2028119_2028827_-|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	100.0	2.6e-130
WP_001092763.1|2029791_2030358_+	DUF4888 domain-containing protein	NA	A0A2H4PQH6	Staphylococcus_phage	100.0	3.3e-99
WP_000586140.1|2030831_2031530_-	hypothetical protein	NA	A0A2H4PQH0	Staphylococcus_phage	94.4	3.8e-113
WP_000581552.1|2031526_2032288_-	lantibiotic immunity ABC transporter MutE/EpiE family permease subunit	NA	A0A2H4PQH2	Staphylococcus_phage	100.0	4.4e-131
WP_001096791.1|2032284_2032977_-	lantibiotic protection ABC transporter ATP-binding subunit	NA	A0A2H4PQG7	Staphylococcus_phage	100.0	6.2e-124
WP_000691541.1|2032999_2034373_-	S8 family serine peptidase	NA	A0A2H4PQH1	Staphylococcus_phage	100.0	2.9e-258
WP_000504439.1|2034382_2034901_-	flavoprotein	NA	A0A2H4PQG9	Staphylococcus_phage	100.0	2.0e-95
WP_000566596.1|2034916_2036161_-	lanthionine synthetase C family protein	NA	A0A2H4PQH9	Staphylococcus_phage	100.0	5.1e-238
WP_001803290.1|2036153_2037896_-	lantibiotic dehydratase	NA	A0A2H4PQG8	Staphylococcus_phage	54.1	2.5e-259
WP_000416756.1|2037960_2038104_-	gallidermin/nisin family lantibiotic	NA	A0A2H4PQH4	Staphylococcus_phage	80.9	5.3e-14
WP_000416759.1|2038840_2038984_-	gallidermin/nisin family lantibiotic	NA	NA	NA	NA	NA
WP_000782464.1|2039224_2040208_-	bi-component leukocidin LukED subunit D	NA	A0A2H4PQH7	Staphylococcus_phage	99.1	2.3e-185
WP_000473596.1|2040209_2041145_-	beta-channel forming cytolysin	NA	A0A2H4PQI5	Staphylococcus_phage	100.0	1.4e-174
>prophage 15
NC_021670	Staphylococcus aureus, complete sequence	2980548	2124811	2225672	2980548	protease,tail,capsid,tRNA,portal,terminase,integrase,holin,head	Staphylococcus_phage(84.81%)	118	2187673:2187690	2211793:2211810
WP_000545370.1|2124811_2126239_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	tRNA	NA	NA	NA	NA
WP_000027928.1|2126251_2127709_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	tRNA	NA	NA	NA	NA
WP_000170162.1|2127710_2128013_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
WP_000957015.1|2128379_2129918_+	sodium/proline symporter PutP	NA	NA	NA	NA	NA
WP_000831698.1|2130006_2131206_-	CamS family sex pheromone protein	NA	NA	NA	NA	NA
WP_000774565.1|2131218_2133222_-	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	36.1	5.8e-114
WP_000992921.1|2133225_2135418_-	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	42.2	1.0e-135
WP_000272068.1|2135414_2136107_-	heptaprenylglyceryl phosphate synthase	NA	NA	NA	NA	NA
WP_001165363.1|2136278_2136581_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000572878.1|2136689_2137985_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.9	1.6e-16
WP_000827748.1|2138845_2140012_+|protease	cysteine protease staphopain A	protease	NA	NA	NA	NA
WP_000434933.1|2140042_2140369_+	staphostatin A	NA	NA	NA	NA	NA
WP_000669862.1|2140660_2140834_-	NETI motif-containing protein	NA	NA	NA	NA	NA
WP_000011542.1|2140814_2141417_-	DUF2179 domain-containing protein	NA	NA	NA	NA	NA
WP_000040873.1|2141687_2142509_-	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.7	1.8e-69
WP_000284431.1|2142501_2143971_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	45.1	4.5e-108
WP_020444756.1|2144154_2145231_+	nitric oxide synthase oxygenase	NA	NA	NA	NA	NA
WP_001177817.1|2145250_2146045_+	prephenate dehydratase	NA	NA	NA	NA	NA
WP_001802312.1|2146116_2146224_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000323161.1|2146234_2147797_-	SLC13 family permease	NA	NA	NA	NA	NA
WP_000275730.1|2148001_2149099_-	pectate lyase	NA	U5PWM6	Bacillus_phage	34.6	1.9e-47
WP_000149686.1|2149470_2150031_+	cysteine hydrolase	NA	G3MA16	Bacillus_virus	41.2	2.0e-32
WP_001140871.1|2150083_2151013_+	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA	NA
WP_001790680.1|2151207_2151381_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001021214.1|2151432_2152812_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_000181322.1|2152931_2153960_-	lactonase family protein	NA	NA	NA	NA	NA
WP_000205106.1|2154229_2154631_+	YolD-like family protein	NA	U3PG23	Staphylococcus_phage	42.9	6.0e-23
WP_000267034.1|2155203_2155377_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001188077.1|2155827_2156868_+	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_000713060.1|2156924_2157767_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_001033971.1|2157763_2158321_-	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_000966288.1|2158380_2158905_-	membrane protein	NA	NA	NA	NA	NA
WP_000182842.1|2159025_2159589_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_001221651.1|2159654_2160395_-	phenol-soluble modulin export ABC transporter permease subunit PmtD	NA	NA	NA	NA	NA
WP_000763048.1|2160394_2161267_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	NA	A0A2H4PQG7	Staphylococcus_phage	35.2	6.1e-28
WP_000645727.1|2161263_2161944_-	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA	NA
WP_000991302.1|2161944_2162841_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	1.1e-16
WP_000691584.1|2162837_2163218_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000681968.1|2163481_2163658_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000990056.1|2163900_2163999_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001068542.1|2164198_2165485_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_000669720.1|2165808_2167863_-	extracellular adherence protein Eap/Map	NA	NA	NA	NA	NA
WP_000669789.1|2168820_2169000_+	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	100.0	2.2e-25
WP_001791826.1|2169310_2169571_+	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_000702262.1|2169623_2169974_-	complement inhibitor SCIN-A	NA	A7TWS0	Staphylococcus_phage	100.0	7.5e-54
WP_000727651.1|2170655_2171105_+	chemotaxis-inhibiting protein CHIPS	NA	A0A1P8L6A8	Staphylococcus_phage	99.3	2.1e-77
WP_000919350.1|2172184_2172676_-	staphylokinase	NA	A0A1X9H028	Staphylococcus_phage	100.0	9.5e-87
WP_000861038.1|2172866_2173622_-	CHAP domain-containing protein	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
WP_000611512.1|2173633_2173888_-|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
WP_072482930.1|2174099_2174276_-|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	96.6	3.8e-22
WP_000539688.1|2174425_2174722_-	DUF2951 domain-containing protein	NA	D2JLG2	Staphylococcus_phage	100.0	2.9e-46
WP_001040261.1|2174779_2175067_-	hypothetical protein	NA	D2JLG1	Staphylococcus_phage	100.0	1.3e-43
WP_001153681.1|2175113_2175266_-	hypothetical protein	NA	D2JLG0	Staphylococcus_phage	100.0	5.2e-20
WP_000582158.1|2175255_2179041_-	hypothetical protein	NA	A0A1X9H0H3	Staphylococcus_phage	98.4	0.0e+00
WP_000567408.1|2179056_2180541_-|tail	phage tail family protein	tail	A0A2I6PDJ0	Staphylococcus_phage	100.0	1.2e-297
WP_001795393.1|2180537_2185067_-|tail	phage tail tape measure protein	tail	A0A1X9H084	Staphylococcus_phage	100.0	0.0e+00
WP_001549167.1|2185123_2185261_-	hypothetical protein	NA	A0A2I6PDX7	Staphylococcus_phage	100.0	3.4e-18
WP_001096355.1|2185311_2185662_-	hypothetical protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
WP_072050172.1|2185711_2185936_-	Ig-like domain-containing protein	NA	A0A075LYE8	Staphylococcus_phage	98.6	8.8e-32
WP_000268741.1|2185977_2186622_-|tail	phage tail protein	tail	W5R9H4	Staphylococcus_phage	100.0	6.5e-120
WP_000565498.1|2186622_2187030_-	hypothetical protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
WP_000114225.1|2187026_2187431_-	HK97 gp10 family phage protein	NA	A0A2I6PDJ6	Staphylococcus_phage	100.0	4.3e-69
WP_000755150.1|2187427_2187790_-|head,tail	head-tail adaptor protein	head,tail	G4KNQ4	Staphylococcus_phage	100.0	4.4e-65
2187673:2187690	attL	ATAATTTTTCTTCTTTTT	NA	NA	NA	NA
WP_000150936.1|2187773_2188058_-|head,tail	phage head-tail adapter protein	head,tail	A0A2I6PDJ5	Staphylococcus_phage	100.0	2.3e-45
WP_000238236.1|2188047_2188332_-	hypothetical protein	NA	A0A2I6PDJ3	Staphylococcus_phage	100.0	1.8e-45
WP_000154555.1|2188351_2189497_-|capsid	phage major capsid protein	capsid	A0A1X9H072	Staphylococcus_phage	100.0	5.6e-215
WP_000025274.1|2190241_2191429_-|portal	phage portal protein	portal	A0A2I6PDI1	Staphylococcus_phage	100.0	1.0e-219
WP_000625088.1|2191444_2193106_-|terminase	terminase large subunit	terminase	A0A2I6PDJ8	Staphylococcus_phage	100.0	0.0e+00
WP_000402904.1|2193102_2193447_-	hypothetical protein	NA	G4KNP9	Staphylococcus_phage	100.0	9.4e-57
WP_000988336.1|2193577_2193877_-	HNH endonuclease	NA	A0EWY8	Staphylococcus_phage	100.0	4.6e-52
WP_000590126.1|2194108_2194525_-	hypothetical protein	NA	A0A1X9H0U8	Staphylococcus_phage	100.0	2.9e-76
WP_000265039.1|2194552_2194753_-	DUF1514 family protein	NA	R9QT57	Staphylococcus_phage	98.5	1.4e-28
WP_000595265.1|2194752_2194902_-	transcriptional activator RinB	NA	A0A1W6JPZ2	Staphylococcus_phage	100.0	4.8e-18
WP_000195820.1|2194898_2195105_-	DUF1381 domain-containing protein	NA	A0A1X9H0C2	Staphylococcus_phage	100.0	1.3e-21
WP_001066444.1|2195141_2195678_-	dUTP diphosphatase	NA	A0A1X9H0S5	Staphylococcus_phage	100.0	1.4e-96
WP_000197967.1|2195670_2196081_-	hypothetical protein	NA	C8CH13	Staphylococcus_phage	100.0	2.3e-70
WP_031868690.1|2196077_2196611_-	hypothetical protein	NA	A0A1X9H0D4	Staphylococcus_phage	96.1	8.5e-81
WP_000979209.1|2196607_2196955_-	hypothetical protein	NA	D2JGL4	Staphylococcus_phage	100.0	5.9e-59
WP_020444759.1|2196951_2197332_-	hypothetical protein	NA	A0A0E3T8H9	Staphylococcus_phage	95.2	7.9e-65
WP_072466103.1|2197367_2197616_-	hypothetical protein	NA	M9NTB1	Staphylococcus_phage	98.8	8.8e-41
WP_000022727.1|2197615_2197870_-	DUF3310 domain-containing protein	NA	A0A2I6PEN5	Staphylococcus_phage	100.0	1.6e-42
WP_001187239.1|2198233_2198419_-	DUF3113 family protein	NA	Q4ZAR6	Staphylococcus_virus	100.0	2.4e-27
WP_020444760.1|2198423_2198828_-	DUF1064 domain-containing protein	NA	G4KNP2	Staphylococcus_phage	98.5	8.1e-68
WP_041205435.1|2198837_2199059_-	DUF3269 family protein	NA	Q9G021	Staphylococcus_phage	98.6	6.4e-35
WP_000237153.1|2199071_2199233_-	hypothetical protein	NA	D2JGK6	Staphylococcus_phage	100.0	4.5e-22
WP_020444664.1|2199226_2200000_-	ATP-binding protein	NA	Q4ZAS1	Staphylococcus_virus	97.7	1.1e-140
WP_000190226.1|2200009_2200780_-	conserved phage C-terminal domain-containing protein	NA	A0A2H4PQI2	Staphylococcus_phage	100.0	2.4e-116
WP_016028252.1|2200825_2201485_+	hypothetical protein	NA	E0Y3Q0	Staphylococcus_virus	100.0	1.4e-120
WP_020444663.1|2201594_2202269_-	hypothetical protein	NA	A0A1X9H0A9	Staphylococcus_phage	97.3	3.8e-126
WP_041205441.1|2202282_2202711_-	single-stranded DNA-binding protein	NA	A0A0E3XC62	Staphylococcus_phage	90.8	4.4e-64
WP_000139720.1|2202710_2203334_-	DUF1071 domain-containing protein	NA	A0A2H4PQQ6	Staphylococcus_phage	100.0	1.4e-114
WP_000815401.1|2203326_2203548_-	DUF2483 family protein	NA	A7TWM6	Staphylococcus_phage	100.0	3.2e-34
WP_000291489.1|2203557_2203818_-	DUF1108 family protein	NA	A0A1W6JQ03	Staphylococcus_phage	100.0	7.6e-43
WP_000066020.1|2203910_2204072_-	DUF1270 domain-containing protein	NA	A0A2I6PDF7	Staphylococcus_phage	100.0	1.9e-20
WP_001120197.1|2204068_2204389_-	DUF771 domain-containing protein	NA	A0A2I6PDH6	Staphylococcus_phage	100.0	1.5e-56
WP_000275058.1|2204447_2205080_+	hypothetical protein	NA	A7TW95	Staphylococcus_phage	100.0	1.5e-113
WP_001148861.1|2205264_2205462_-	hypothetical protein	NA	A0A1W6JPV3	Staphylococcus_phage	100.0	1.2e-24
WP_001148337.1|2205477_2206227_-	phage antirepressor KilAC domain-containing protein	NA	Q8SDM9	Staphylococcus_phage	99.6	4.4e-136
WP_000351243.1|2206283_2206823_+	hypothetical protein	NA	A7TW92	Staphylococcus_phage	100.0	1.7e-97
WP_000435341.1|2206846_2207107_-	transcriptional regulator	NA	A7TW91	Staphylococcus_phage	100.0	2.7e-40
WP_000338186.1|2207124_2207349_-	DUF739 family protein	NA	A7TW90	Staphylococcus_phage	100.0	4.5e-36
WP_001208482.1|2207507_2208278_+	helix-turn-helix domain-containing protein	NA	A0A1P8L6G7	Staphylococcus_phage	100.0	6.2e-141
WP_000705240.1|2208477_2208660_+	hypothetical protein	NA	A0A2I6PDR4	Staphylococcus_phage	100.0	5.3e-27
WP_001013104.1|2208695_2208842_+	hypothetical protein	NA	A0A2I6PEK8	Staphylococcus_phage	89.6	1.1e-14
WP_000191459.1|2208838_2209453_-	hypothetical protein	NA	A7TW88	Staphylococcus_phage	100.0	7.9e-107
WP_000857193.1|2209560_2210598_+|integrase	site-specific integrase	integrase	E9LT82	Staphylococcus_phage	93.0	1.0e-178
WP_000791407.1|2212753_2213809_-	bi-component leukocidin LukGH subunit H	NA	A0A1X9IGW5	Staphylococcus_phage	34.3	2.8e-35
2211793:2211810	attR	ATAATTTTTCTTCTTTTT	NA	NA	NA	NA
WP_000206638.1|2214243_2215467_+	ArgE/DapE family deacylase	NA	NA	NA	NA	NA
WP_001789591.1|2215891_2216683_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_000825510.1|2216744_2217656_-	iron-hydroxamate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_001045079.1|2217816_2219124_+	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000022887.1|2219975_2220419_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_078066184.1|2220564_2220960_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020444766.1|2221276_2221867_-|terminase	terminase small subunit	terminase	Q4ZE85	Staphylococcus_phage	95.2	4.2e-97
WP_000128898.1|2221863_2222076_-	hypothetical protein	NA	Q4ZE86	Staphylococcus_phage	74.3	1.1e-23
WP_000240653.1|2222777_2224394_-	chaperonin GroEL	NA	A0A240F779	uncultured_virus	54.7	1.2e-157
WP_000917289.1|2224469_2224754_-	co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
WP_020444767.1|2224928_2225672_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
