The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_021499	Pseudomonas resinovorans NBRC 106553, complete genome	6285863	2775971	2783632	6285863	tRNA	uncultured_Caudovirales_phage(75.0%)	10	NA	NA
WP_016492449.1|2775971_2777252_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	45.4	1.7e-98
WP_016492450.1|2777373_2778768_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_016492451.1|2778752_2779766_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_016492452.1|2779851_2780835_-	glycosyl transferase family protein	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	77.6	6.9e-145
WP_016492453.1|2780831_2781167_-	TusE/DsrC/DsvC family sulfur relay protein	NA	A0A2H4J8B6	uncultured_Caudovirales_phage	72.1	9.1e-41
WP_016492454.1|2781163_2781466_-	sulfurtransferase complex subunit TusB	NA	A0A2H4JG28	uncultured_Caudovirales_phage	60.0	1.4e-24
WP_016492455.1|2781465_2781822_-	sulfurtransferase complex subunit TusC	NA	A0A2H4J8C0	uncultured_Caudovirales_phage	61.9	9.7e-33
WP_016492456.1|2781823_2782216_-	sulfurtransferase complex subunit TusD	NA	A0A2H4JA39	uncultured_Caudovirales_phage	76.7	1.5e-50
WP_016492457.1|2782330_2782999_-	Bax inhibitor-1/YccA family protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	84.8	6.8e-96
WP_016492458.1|2783422_2783632_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	63.9	1.7e-16
>prophage 2
NC_021499	Pseudomonas resinovorans NBRC 106553, complete genome	6285863	4965666	4973879	6285863	transposase	uncultured_Mediterranean_phage(33.33%)	7	NA	NA
WP_041770404.1|4965666_4968207_+	DNA mismatch repair protein MutS	NA	A0A1V0SGG8	Hokovirus	22.2	8.8e-27
WP_016494363.1|4968347_4968671_+	ferredoxin family protein	NA	NA	NA	NA	NA
WP_010466230.1|4968944_4969925_+|transposase	IS5-like element ISPre2 family transposase	transposase	A0A077K814	Ralstonia_phage	59.0	7.0e-97
WP_016494364.1|4970307_4971312_-	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	37.6	1.2e-35
WP_016494365.1|4971418_4972291_-	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A0S2SXL7	Bacillus_phage	34.3	3.9e-06
WP_016494366.1|4972452_4973130_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	53.7	2.3e-43
WP_016494367.1|4973129_4973879_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.8	1.4e-65
>prophage 1
NC_021506	Pseudomonas resinovorans NBRC 106553 plasmid pCAR1.3, complete sequence	198965	0	57034	198965	integrase,transposase	Ralstonia_phage(25.0%)	59	18966:18980	52898:52912
WP_016502302.1|77_1097_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_016502303.1|1107_2019_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_011077858.1|2083_3244_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010466230.1|3403_4384_-|transposase	IS5-like element ISPre2 family transposase	transposase	A0A077K814	Ralstonia_phage	59.0	7.0e-97
WP_011077859.1|4542_5568_-	anthranilate 1,2-dioxygenase electron transfer component AntC	NA	NA	NA	NA	NA
WP_011077860.1|5586_6078_-	anthranilate 1,2-dioxygenase small subunit	NA	NA	NA	NA	NA
WP_011077861.1|6080_7484_-	anthranilate 1,2-dioxygenase large subunit	NA	NA	NA	NA	NA
WP_011077862.1|7825_8806_-|transposase	IS5-like element ISPre1 family transposase	transposase	A0A077K814	Ralstonia_phage	58.3	1.2e-96
WP_011077863.1|9058_10315_+	OprD family porin	NA	NA	NA	NA	NA
WP_016502306.1|10713_11652_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_011077865.1|11655_12648_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_011077866.1|13116_14352_-	dienelactone hydrolase family protein	NA	S4VXZ7	Pandoravirus	33.6	4.8e-10
WP_011077867.1|14398_15208_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_016502307.1|15204_15798_-	cysteine hydrolase	NA	NA	NA	NA	NA
WP_011077868.1|15797_16331_-	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_011077869.1|16320_17652_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_011077870.1|17702_18647_-	oxidoreductase	NA	NA	NA	NA	NA
WP_011077871.1|18886_19270_+	DUF5329 domain-containing protein	NA	NA	NA	NA	NA
18966:18980	attL	AGGCCGAGGTGGCGC	NA	NA	NA	NA
WP_016502310.1|22458_23421_+	DUF4123 domain-containing protein	NA	NA	NA	NA	NA
WP_011077874.1|23435_23927_+	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
WP_011077875.1|23952_24441_+	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
WP_011077876.1|24466_24979_+	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
WP_016502311.1|24975_25257_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011077862.1|25352_26333_+|transposase	IS5-like element ISPre1 family transposase	transposase	A0A077K814	Ralstonia_phage	58.3	1.2e-96
WP_019366953.1|28468_29641_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_011077879.1|29698_29971_+	subunit of meta-cleavage enzyme	NA	NA	NA	NA	NA
WP_011077880.1|29970_30780_+	AmmeMemoRadiSam system protein B	NA	NA	NA	NA	NA
WP_011077881.1|30769_31642_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_011077882.1|31662_31986_+	non-heme iron oxygenase ferredoxin subunit	NA	NA	NA	NA	NA
WP_011077883.1|32019_32337_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011077884.1|32366_33356_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_011077885.1|33379_34162_+	2-oxopent-4-enoate hydratase	NA	NA	NA	NA	NA
WP_011077886.1|34273_34714_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011077887.1|35099_35843_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011077888.1|35796_36744_+	acetaldehyde dehydrogenase (acetylating)	NA	E5EQ71	Micromonas_sp._RCC1109_virus	35.9	2.1e-37
WP_019367563.1|36752_37763_+	4-hydroxy-2-oxovalerate aldolase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	30.8	9.2e-44
WP_016502314.1|38063_38453_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011077890.1|38433_39231_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016502315.1|39239_39650_-	helix-turn-helix domain-containing protein	NA	A4JWR8	Burkholderia_virus	36.5	1.3e-12
WP_016502316.1|39765_39972_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_011077862.1|40265_41246_+|transposase	IS5-like element ISPre1 family transposase	transposase	A0A077K814	Ralstonia_phage	58.3	1.2e-96
WP_144277083.1|41368_42394_+	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_011077892.1|42644_42914_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016502317.1|43057_43333_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_016502318.1|43332_43605_-	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA	NA
WP_016502319.1|43618_44032_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011077894.1|44038_44779_-	DUF2807 domain-containing protein	NA	NA	NA	NA	NA
WP_011077895.1|45010_45571_+	recombinase family protein	NA	A0A1B0V7I5	Salmonella_phage	94.4	1.3e-55
WP_013100941.1|46932_47682_-	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	59.8	4.5e-80
WP_011077898.1|47569_49249_-|transposase	IS21-like element IS1162 family transposase	transposase	K4I413	Acidithiobacillus_phage	56.6	1.1e-163
WP_011077899.1|49455_50703_-	three-Cys-motif partner protein TcmP	NA	NA	NA	NA	NA
WP_011077900.1|50722_51466_-	phage Gp37/Gp68 family protein	NA	A0A088F7U1	Mycobacterium_phage	44.2	4.7e-61
WP_011077901.1|51495_52467_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_011077902.1|52647_53649_+	DNA-binding protein	NA	NA	NA	NA	NA
52898:52912	attR	AGGCCGAGGTGGCGC	NA	NA	NA	NA
WP_016502320.1|53686_54073_-	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
WP_011077903.1|54162_54552_+	IS66 family insertion sequence hypothetical protein	NA	Q76S41	Shigella_phage	32.2	1.5e-05
WP_011077904.1|54548_54893_+	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZDM8	Stx2-converting_phage	67.3	1.3e-37
WP_011077905.1|54928_56437_+|transposase	IS66-like element ISPre3 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	54.2	4.7e-145
WP_011077906.1|56440_57034_+	plasmid pRiA4b ORF-3 family protein	NA	A0A2H4PDG5	Mycobacterium_phage	35.2	1.9e-20
>prophage 2
NC_021506	Pseudomonas resinovorans NBRC 106553 plasmid pCAR1.3, complete sequence	198965	65392	75494	198965		Escherichia_phage(25.0%)	9	NA	NA
WP_033050535.1|65392_66895_-	ATP-dependent helicase	NA	K7QLT2	Escherichia_phage	32.6	2.6e-50
WP_028622368.1|67042_67363_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016502326.1|67463_67805_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011077915.1|67974_68841_-	replication initiation protein	NA	A0A218MNI2	uncultured_virus	32.2	5.3e-24
WP_011077916.1|69846_70326_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011077917.1|70527_71661_+	ParA family protein	NA	Q7Y3Y6	Yersinia_phage	37.1	3.1e-08
WP_011077918.1|71820_72849_+	ParB/RepB/Spo0J family partition protein	NA	NA	NA	NA	NA
WP_011077920.1|73243_73549_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011077922.1|74504_75494_+	hypothetical protein	NA	A0A1B1IPY1	uncultured_Mediterranean_phage	37.4	2.0e-19
>prophage 3
NC_021506	Pseudomonas resinovorans NBRC 106553 plasmid pCAR1.3, complete sequence	198965	78827	84413	198965	integrase	Ralstonia_phage(20.0%)	8	77069:77082	81307:81320
77069:77082	attL	TGAAGAAGCCTTGG	NA	NA	NA	NA
WP_011077927.1|78827_80087_-|integrase	integrase arm-type DNA-binding domain-containing protein	integrase	A0A077KET4	Ralstonia_phage	42.7	1.3e-79
WP_011077928.1|80083_80491_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016502328.1|80811_81609_-	serine/threonine protein phosphatase	NA	A0A291L9W7	Bordetella_phage	44.5	2.1e-43
81307:81320	attR	CCAAGGCTTCTTCA	NA	NA	NA	NA
WP_016502329.1|81627_82305_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_011077931.1|82330_82720_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011077932.1|82867_83707_-	SAM-dependent DNA methyltransferase	NA	A0A2K9V411	Faecalibacterium_phage	34.4	2.7e-33
WP_011077933.1|83774_84125_-	hypothetical protein	NA	A0A2H4P7P5	Pseudomonas_phage	49.6	1.3e-21
WP_011077934.1|84137_84413_-	hypothetical protein	NA	A4PE68	Ralstonia_virus	63.3	1.3e-29
>prophage 4
NC_021506	Pseudomonas resinovorans NBRC 106553 plasmid pCAR1.3, complete sequence	198965	88611	98854	198965		uncultured_Caudovirales_phage(14.29%)	11	NA	NA
WP_011077943.1|88611_89355_-	hypothetical protein	NA	A0A2H4J7T1	uncultured_Caudovirales_phage	42.6	3.5e-48
WP_011077944.1|89625_90156_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011077945.1|90264_91146_-	prohibitin family protein	NA	A0A1S6UA41	Serratia_phage	58.6	8.0e-60
WP_016502335.1|91428_91665_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011077946.1|92120_93056_+	signal peptide peptidase SppA	NA	A4JX00	Burkholderia_virus	28.6	2.7e-13
WP_011077947.1|93122_94124_-	nucleoid-associated protein YejK	NA	L7TI92	Pseudomonas_virus	78.6	2.7e-152
WP_016971295.1|94149_94698_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011077949.1|94956_96447_+	DEAD/DEAH box helicase	NA	A0A0H5ARP5	Pseudomonas_phage	51.2	9.1e-141
WP_011077950.1|96542_96818_+	HU family DNA-binding protein	NA	A0A2H4PAM3	Aphanizomenon_phage	53.3	1.6e-19
WP_011077951.1|96938_97391_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011077952.1|97387_98854_+	ATP-dependent helicase	NA	A0A1Q1N983	Escherichia_phage	31.1	6.2e-49
>prophage 5
NC_021506	Pseudomonas resinovorans NBRC 106553 plasmid pCAR1.3, complete sequence	198965	101935	102904	198965		Rhizobium_phage(100.0%)	1	NA	NA
WP_011077956.1|101935_102904_+	AAA domain-containing protein	NA	L7TKP0	Rhizobium_phage	33.7	3.7e-26
>prophage 6
NC_021506	Pseudomonas resinovorans NBRC 106553 plasmid pCAR1.3, complete sequence	198965	113024	121770	198965	transposase	Acidithiobacillus_phage(33.33%)	8	NA	NA
WP_144277085.1|113024_113852_-	hypothetical protein	NA	R9TPP4	Aeromonas_phage	30.4	2.3e-24
WP_011077972.1|114342_115191_-	DsbA family protein	NA	NA	NA	NA	NA
WP_011077973.1|115197_115755_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011077974.1|116177_116690_+	single-stranded DNA-binding protein	NA	I3PGW4	Xanthomonas_phage	69.4	1.6e-44
WP_016502344.1|116757_117849_+	recombinase RecT	NA	F1C5B8	Cronobacter_phage	41.3	1.1e-39
WP_011077862.1|117931_118912_+|transposase	IS5-like element ISPre1 family transposase	transposase	A0A077K814	Ralstonia_phage	58.3	1.2e-96
WP_041771204.1|119479_120994_+|transposase	IS21-like element ISPre4 family transposase	transposase	K4I413	Acidithiobacillus_phage	53.4	2.7e-148
WP_011077977.1|121014_121770_+	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	54.4	2.3e-71
>prophage 7
NC_021506	Pseudomonas resinovorans NBRC 106553 plasmid pCAR1.3, complete sequence	198965	140554	143426	198965	transposase	Stx2-converting_phage(50.0%)	4	NA	NA
WP_011077903.1|140554_140944_+	IS66 family insertion sequence hypothetical protein	NA	Q76S41	Shigella_phage	32.2	1.5e-05
WP_011077904.1|140940_141285_+	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZDM8	Stx2-converting_phage	67.3	1.3e-37
WP_011077905.1|141320_142829_+|transposase	IS66-like element ISPre3 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	54.2	4.7e-145
WP_011077906.1|142832_143426_+	plasmid pRiA4b ORF-3 family protein	NA	A0A2H4PDG5	Mycobacterium_phage	35.2	1.9e-20
>prophage 8
NC_021506	Pseudomonas resinovorans NBRC 106553 plasmid pCAR1.3, complete sequence	198965	151568	155708	198965		Clostridioides_phage(50.0%)	5	NA	NA
WP_126588711.1|151568_152288_+	NERD domain-containing protein	NA	A0A2R2ZH57	Clostridioides_phage	37.0	7.8e-13
WP_011078000.1|152520_153207_-	DUF1845 domain-containing protein	NA	NA	NA	NA	NA
WP_011078001.1|153616_153925_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011078002.1|153921_154545_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011078003.1|154592_155708_+	DNA primase	NA	A0A0H5AWB1	Pseudomonas_phage	31.6	5.1e-27
>prophage 9
NC_021506	Pseudomonas resinovorans NBRC 106553 plasmid pCAR1.3, complete sequence	198965	167782	171077	198965		Pseudomonas_phage(33.33%)	4	NA	NA
WP_041771214.1|167782_168460_+	DUF2786 domain-containing protein	NA	Q5ZR11	Pseudomonas_phage	36.2	2.6e-26
WP_011078017.1|168780_169410_+	hypothetical protein	NA	A0A2H4JFQ3	uncultured_Caudovirales_phage	31.6	1.2e-28
WP_011078018.1|169483_169696_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011078019.1|169598_171077_+	exodeoxyribonuclease VII large subunit	NA	M1NLU2	Moumouvirus	31.6	5.9e-15
>prophage 10
NC_021506	Pseudomonas resinovorans NBRC 106553 plasmid pCAR1.3, complete sequence	198965	179488	188822	198965	transposase	Salmonella_phage(40.0%)	7	NA	NA
WP_011078028.1|179488_180061_-	recombinase family protein	NA	A0A1B0V7I5	Salmonella_phage	100.0	1.2e-59
WP_011078029.1|180286_181945_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	36.4	5.6e-22
WP_011078030.1|182112_183363_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	46.5	2.2e-47
WP_011078031.1|183705_184149_+	hypothetical protein	NA	A0A1Y0SX42	Pseudomonas_phage	55.4	1.1e-12
WP_011078033.1|184571_185021_+	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
WP_011078034.1|185017_185455_+	RES family NAD+ phosphorylase	NA	NA	NA	NA	NA
WP_011078035.1|185807_188822_+|transposase	Tn3 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	24.9	2.6e-70
>prophage 11
NC_021506	Pseudomonas resinovorans NBRC 106553 plasmid pCAR1.3, complete sequence	198965	193350	194340	198965		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_016502360.1|193350_194340_+	aerotaxis receptor	NA	A0A2H4J162	uncultured_Caudovirales_phage	35.2	9.7e-22
>prophage 12
NC_021506	Pseudomonas resinovorans NBRC 106553 plasmid pCAR1.3, complete sequence	198965	197617	198304	198965		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
WP_011078047.1|197617_198304_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.6	3.6e-07
