The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_021251	Mycobacterium tuberculosis CCDC5079, complete sequence	4414325	2935721	2973994	4414325	head,terminase,integrase,protease,tRNA,capsid	Mycobacterium_phage(30.0%)	47	2964523:2964550	2974147:2974174
WP_003413486.1|2935721_2937800_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	34.9	2.5e-104
WP_003413487.1|2937908_2938136_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009940032.1|2938132_2939518_-	PE family protein	NA	NA	NA	NA	NA
WP_003413569.1|2939862_2940363_+	DUF1990 family protein	NA	NA	NA	NA	NA
WP_003413574.1|2940379_2940820_-	DoxX family membrane protein	NA	NA	NA	NA	NA
WP_003901437.1|2940966_2941644_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_003413583.1|2941628_2941982_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_003413586.1|2941994_2942420_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003901438.1|2942416_2943091_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003413589.1|2943168_2943990_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_003413592.1|2944125_2945019_+	universal stress protein	NA	NA	NA	NA	NA
WP_003413594.1|2945021_2945840_-	universal stress protein	NA	NA	NA	NA	NA
WP_003899401.1|2945854_2947036_-|protease	site-2 protease family protein	protease	NA	NA	NA	NA
WP_003413598.1|2947094_2947526_-	hypoxic response protein Hrp1	NA	A0A2I6B2H4	Macacine_betaherpesvirus	100.0	1.9e-75
WP_003899402.1|2948039_2949281_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003899403.1|2949590_2949953_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003902322.1|2950299_2951424_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413614.1|2951425_2951965_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413616.1|2952104_2953403_+	RtcB family protein	NA	A2RQD0	Archaeal_BJ1_virus	43.3	3.8e-90
WP_003413619.1|2953441_2953723_-	DUF1876 domain-containing protein	NA	NA	NA	NA	NA
WP_003413625.1|2953867_2954353_-	hemerythrin domain-containing protein	NA	NA	NA	NA	NA
WP_003902325.1|2954379_2954637_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003899405.1|2957003_2957246_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003899406.1|2957246_2957924_+	membrane protein	NA	NA	NA	NA	NA
WP_003413654.1|2958119_2958776_+	DedA family protein	NA	NA	NA	NA	NA
WP_003413657.1|2958938_2959385_+	anti-sigma factor antagonist	NA	NA	NA	NA	NA
WP_003413663.1|2959559_2959892_-	YnfA family protein	NA	NA	NA	NA	NA
WP_003413665.1|2960011_2960371_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003413675.1|2960472_2960931_+	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_003899407.1|2961066_2961447_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003413686.1|2961443_2962940_+	ACR3 family arsenite efflux transporter	NA	A0A2H4PQT9	Staphylococcus_phage	39.7	5.1e-14
WP_003912823.1|2963174_2963366_+	antitoxin MazE family protein	NA	NA	NA	NA	NA
WP_077365235.1|2963438_2963612_+	hypothetical protein	NA	NA	NA	NA	NA
2964523:2964550	attL	ACTGGTTCAATCCCAGTATCGCGCACCA	NA	NA	NA	NA
WP_003899409.1|2964656_2965088_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003900538.1|2965084_2966083_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2D1G8E2	Mycobacterium_phage	47.8	7.4e-62
WP_003900539.1|2966096_2966561_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_003908028.1|2966548_2966800_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003901443.1|2966970_2968410_-|capsid	phage major capsid protein	capsid	A0A1B3AYS4	Gordonia_phage	40.6	1.4e-66
WP_003899412.1|2968417_2968951_-|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JB68	uncultured_Caudovirales_phage	32.9	3.1e-06
WP_003899413.1|2969103_2969730_-|terminase	phage terminase small subunit P27 family	terminase	V9H0V4	Actinophage	47.2	1.6e-17
WP_003899414.1|2969761_2970085_-	type II toxin-antitoxin system toxin	NA	NA	NA	NA	NA
WP_003899415.1|2970164_2970410_-	type II toxin-antitoxin system antitoxin	NA	NA	NA	NA	NA
WP_003899416.1|2970406_2971834_-	DUF3631 domain-containing protein	NA	NA	NA	NA	NA
WP_003899417.1|2971835_2972228_-	DUF2742 domain-containing protein	NA	NA	NA	NA	NA
WP_003899418.1|2972224_2972485_-	helix-turn-helix domain-containing protein	NA	A0A2P1CHK7	Mycobacterium_phage	64.6	3.0e-15
WP_003900543.1|2972501_2972864_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003899420.1|2972866_2973994_-|integrase	site-specific integrase	integrase	A0A1X9SFC1	Mycobacterium_phage	40.4	1.5e-66
2974147:2974174	attR	ACTGGTTCAATCCCAGTATCGCGCACCA	NA	NA	NA	NA
>prophage 2
NC_021251	Mycobacterium tuberculosis CCDC5079, complete sequence	4414325	3706703	3796139	4414325	tRNA,transposase	Burkholderia_virus(28.57%)	57	NA	NA
WP_148286797.1|3706703_3707965_-|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	58.7	4.8e-82
WP_009937401.1|3708258_3708420_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_003902445.1|3708441_3709971_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_003417413.1|3709903_3710842_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_003902446.1|3710850_3712218_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	25.8	9.0e-18
WP_003417415.1|3712286_3713504_+	D-alanyl-D-alanine carboxypeptidase DacB1	NA	A0A1P8VVG5	Erythrobacter_phage	27.3	8.0e-10
WP_003417416.1|3713599_3715108_+	sugar porter family MFS transporter	NA	NA	NA	NA	NA
WP_003417418.1|3715104_3716256_+	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA	NA
WP_003417421.1|3716446_3717292_-	DUF732 domain-containing protein	NA	NA	NA	NA	NA
WP_003900026.1|3717766_3718207_+	heavy metal-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003417435.1|3718240_3719110_-	inner membrane protein YhjD	NA	NA	NA	NA	NA
WP_003417440.1|3719130_3720141_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_009940431.1|3720425_3721058_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_003417452.1|3721124_3722354_-	NADP-dependent isocitrate dehydrogenase	NA	NA	NA	NA	NA
WP_003900028.1|3722636_3723986_+	bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase	NA	A0A0B5JD48	Pandoravirus	26.5	2.5e-12
WP_003417458.1|3723997_3725137_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003417461.1|3725133_3725865_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_038438875.1|3725873_3735215_-	PPE family protein	NA	NA	NA	NA	NA
WP_031654342.1|3735263_3736244_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417619.1|3741545_3741803_-	DUF3017 domain-containing protein	NA	NA	NA	NA	NA
WP_003901612.1|3742058_3751532_-	PPE family protein	NA	NA	NA	NA	NA
WP_049961743.1|3752157_3752604_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_003911006.1|3752640_3753381_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_009938650.1|3753675_3753963_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417738.1|3765692_3766487_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417739.1|3766568_3766940_-	FAD-binding oxidoreductase	NA	A0A0B5JBT9	Pandoravirus	56.4	3.3e-15
WP_157132559.1|3766837_3767056_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417741.1|3767082_3767343_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417745.1|3767457_3767847_+	DUF732 domain-containing protein	NA	NA	NA	NA	NA
WP_003417749.1|3767860_3768154_-	DUF3017 domain-containing protein	NA	NA	NA	NA	NA
WP_003417751.1|3768150_3768996_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	NA	NA	NA	NA
WP_003417757.1|3769119_3769395_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_003417760.1|3769391_3769649_+	Txe/YoeB family addiction module toxin	NA	NA	NA	NA	NA
WP_003900033.1|3769690_3770881_+	NADH:flavin oxidoreductase	NA	NA	NA	NA	NA
WP_003417765.1|3770997_3771366_+	FHA domain-containing protein	NA	NA	NA	NA	NA
WP_003417767.1|3771362_3771914_-	pentapeptide repeat protein MfpA	NA	NA	NA	NA	NA
WP_003417769.1|3771920_3772502_-	ATP/GTP-binding protein	NA	NA	NA	NA	NA
WP_003417772.1|3772482_3772851_-	DUF742 domain-containing protein	NA	NA	NA	NA	NA
WP_003417776.1|3772828_3773221_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003901616.1|3773217_3775848_-	HAMP domain-containing protein	NA	NA	NA	NA	NA
WP_003901617.1|3776083_3776548_+|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	tRNA	NA	NA	NA	NA
WP_009938654.1|3776914_3778690_+	PE family protein	NA	NA	NA	NA	NA
WP_003417881.1|3778690_3779335_-	nitroreductase family protein	NA	NA	NA	NA	NA
WP_003417882.1|3779333_3779768_+	TIGR03667 family PPOX class F420-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003908228.1|3779856_3783096_-	error-prone DNA polymerase DnaE2	NA	A0A1C9LWS4	Streptomyces_phage	32.4	1.6e-118
WP_003900036.1|3783287_3784628_+	wax ester/triacylglycerol synthase family O-acyltransferase	NA	NA	NA	NA	NA
WP_003417892.1|3784669_3785845_+	trehalose-phosphatase	NA	NA	NA	NA	NA
WP_003417895.1|3785898_3786003_+	PE family protein	NA	NA	NA	NA	NA
WP_003900037.1|3786081_3786723_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003417897.1|3786723_3786972_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_014585402.1|3786976_3788404_+	amidase	NA	NA	NA	NA	NA
WP_003417903.1|3788511_3789165_+	HAD family phosphatase	NA	NA	NA	NA	NA
WP_003417905.1|3789203_3790709_-	type B diterpene cyclase	NA	NA	NA	NA	NA
WP_016330438.1|3790713_3791604_-	diterpene synthase	NA	NA	NA	NA	NA
WP_003918607.1|3791612_3793451_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
WP_003417912.1|3793447_3794437_-	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	NA	NA	NA	NA	NA
WP_087902221.1|3794878_3796139_+|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
