assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000397185.1_ASM39718v1	NC_021236	Strawberry lethal yellows phytoplasma (CPA) str. NZSb11, complete sequence	1	208912-209181	1	PILER-CR	no		RT,DEDDh,cas3	Orphan	GACGGAAAAACAATTGATTACATCACCAAATAC	33	2	5	209029-209070|209104-209148|209104-209148|209104-209148|209104-209148	NC_021236.1_842816-842857|NC_021236.1_143874-143918|NC_021236.1_488554-488510|NC_021236.1_507372-507416|NC_021236.1_847980-848024	NA	3	3	Orphan	RT,DEDDh,cas3	NA|216aa|up_0|NC_021236.1_207520_208168_+,NA|108aa|down_6|NC_021236.1_214928_215252_-	NA|433aa|up_9|NC_021236.1_193841_195140_-	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis]	NA|580aa|up_8|NC_021236.1_195866_197606_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|209aa|up_7|NC_021236.1_197762_198389_-	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase	NA|134aa|up_6|NC_021236.1_198274_198676_-	pfam06574, FAD_syn, FAD synthetase	NA|598aa|up_5|NC_021236.1_198862_200656_+	PRK00558, uvrC, excinuclease ABC subunit UvrC	NA|664aa|up_4|NC_021236.1_201817_203809_+	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|290aa|up_3|NC_021236.1_204282_205152_+	cd13600, PBP2_lipoprotein_like_1, Putative periplasmic-binding component of ABC-type methionine uptake transporter system-like; the type 2 periplasmic binding protein fold	NA|297aa|up_2|NC_021236.1_205183_206074_+	cd13526, PBP2_lipoprotein_MetQ_like, The periplasmic-binding component of ABC-type methionine uptake transporter system and its related lipoproteins; the type 2 periplasmic-binding protein fold	NA|132aa|up_1|NC_021236.1_206375_206771_+	cd06664, IscU_like, Iron-sulfur cluster scaffold-like proteins	NA|216aa|up_0|NC_021236.1_207520_208168_+	NA	NA|211aa|down_0|NC_021236.1_209321_209954_-	COG3839, MalK, ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]	NA|156aa|down_1|NC_021236.1_211639_212107_-	COG3600, GepA, Uncharacterized phage-associated protein [Function unknown]	NA|76aa|down_2|NC_021236.1_212316_212544_-	pfam11178, DUF2963, Protein of unknown function (DUF2963)	NA|218aa|down_3|NC_021236.1_212545_213199_-	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|225aa|down_4|NC_021236.1_213413_214088_-	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|47aa|down_5|NC_021236.1_214296_214437_+	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH	NA|108aa|down_6|NC_021236.1_214928_215252_-	NA	NA|114aa|down_7|NC_021236.1_215396_215738_+	cd01210, PTB_EPS8, Epidermal growth factor receptor kinase substrate (EPS8)-like Phosphotyrosine-binding (PTB) domain	NA|100aa|down_8|NC_021236.1_216139_216439_+	pfam13276, HTH_21, HTH-like domain	NA|160aa|down_9|NC_021236.1_217020_217500_-	pfam12113, SVM_signal, SVM protein signal sequence
GCF_000397185.1_ASM39718v1	NC_021236	Strawberry lethal yellows phytoplasma (CPA) str. NZSb11, complete sequence	2	303571-303739	2	PILER-CR	no	DEDDh	RT,DEDDh,cas3	Unclear	TTAATTCTTCAAGAGTATAGCC	22	0	0	NA	NA	NA	2	2	Orphan	RT,DEDDh,cas3	NA|52aa|up_9|NC_021236.1_293053_293209_+,NA|45aa|down_0|NC_021236.1_305620_305755_+	NA|52aa|up_9|NC_021236.1_293053_293209_+	NA	NA|245aa|up_8|NC_021236.1_293414_294149_+	pfam12811, BaxI_1, Bax inhibitor 1 like	NA|148aa|up_7|NC_021236.1_294902_295346_-	cd06664, IscU_like, Iron-sulfur cluster scaffold-like proteins	NA|407aa|up_6|NC_021236.1_295357_296578_-	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily	NA|416aa|up_5|NC_021236.1_296590_297838_-	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated	NA|119aa|up_4|NC_021236.1_297906_298263_-	PRK05338, rplS, 50S ribosomal protein L19; Provisional	NA|245aa|up_3|NC_021236.1_298295_299030_-	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed	NA|92aa|up_2|NC_021236.1_299065_299341_-	PRK00040, rpsP, 30S ribosomal protein S16; Reviewed	NA|371aa|up_1|NC_021236.1_299416_300529_-	PRK00578, prfB, peptide chain release factor 2; Validated	NA|833aa|up_0|NC_021236.1_300532_303031_-	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed	NA|45aa|down_0|NC_021236.1_305620_305755_+	NA	NA|348aa|down_1|NC_021236.1_306790_307834_-	TIGR02349, Chaperone_protein_DnaJ, chaperone protein DnaJ	NA|619aa|down_2|NC_021236.1_307902_309759_-	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|223aa|down_3|NC_021236.1_309745_310414_-	cd00446, GrpE, nucleotide exchange factor GrpE	NA|341aa|down_4|NC_021236.1_310443_311466_-	TIGR00331, Heat-inducible_transcription_repressor_HrcA, heat shock gene repressor HrcA	NA|119aa|down_5|NC_021236.1_312701_313058_-	PRK05591, rplQ, 50S ribosomal protein L17; Validated	NA|331aa|down_6|NC_021236.1_313075_314068_-	PRK05182, PRK05182, DNA-directed RNA polymerase subunit alpha; Provisional	NA|129aa|down_7|NC_021236.1_314096_314483_-	PRK05309, PRK05309, 30S ribosomal protein S11; Validated	NA|122aa|down_8|NC_021236.1_314498_314864_-	PRK05179, rpsM, 30S ribosomal protein S13; Validated	NA|39aa|down_9|NC_021236.1_314876_314993_-	pfam00444, Ribosomal_L36, Ribosomal protein L36
GCF_000397185.1_ASM39718v1	NC_021236	Strawberry lethal yellows phytoplasma (CPA) str. NZSb11, complete sequence	3	489632-489907	3	PILER-CR	no		RT,DEDDh,cas3	Orphan	TTTGGTTTTGTTGCCTGTTTGGGGGTTGTATTCGATGAT	39	0	0	NA	NA	NA	3	3	Orphan	RT,DEDDh,cas3	NA|126aa|up_6|NC_021236.1_478226_478604_+,NA|496aa|up_1|NC_021236.1_486594_488082_-,NA|57aa|down_9|NC_021236.1_499233_499404_+	NA|200aa|up_9|NC_021236.1_476812_477412_-	PRK04296, PRK04296, thymidine kinase; Provisional	NA|80aa|up_8|NC_021236.1_477460_477700_-	PRK00019, rpmE, 50S ribosomal protein L31; Reviewed	NA|62aa|up_7|NC_021236.1_477746_477932_-	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed	NA|126aa|up_6|NC_021236.1_478226_478604_+	NA	NA|136aa|up_5|NC_021236.1_478941_479349_-	cd06471, ACD_LpsHSP_like, Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18	NA|154aa|up_4|NC_021236.1_480656_481118_-	COG4608, AppF, ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism]	NA|321aa|up_3|NC_021236.1_481515_482478_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|183aa|up_2|NC_021236.1_484054_484603_-	pfam01555, N6_N4_Mtase, DNA methylase	NA|496aa|up_1|NC_021236.1_486594_488082_-	NA	NA|417aa|up_0|NC_021236.1_488302_489553_-	pfam11178, DUF2963, Protein of unknown function (DUF2963)	NA|278aa|down_0|NC_021236.1_490188_491022_-	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	NA|541aa|down_1|NC_021236.1_491114_492737_-	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	NA|365aa|down_2|NC_021236.1_492739_493834_-	COG0464, SpoVK, ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones]	NA|396aa|down_3|NC_021236.1_493907_495095_+	TIGR00665, DnaB, replicative DNA helicase	NA|205aa|down_4|NC_021236.1_494979_495594_-	pfam11178, DUF2963, Protein of unknown function (DUF2963)	NA|156aa|down_5|NC_021236.1_496530_496998_-	COG3600, GepA, Uncharacterized phage-associated protein [Function unknown]	NA|76aa|down_6|NC_021236.1_497209_497437_-	pfam11178, DUF2963, Protein of unknown function (DUF2963)	NA|248aa|down_7|NC_021236.1_497870_498614_+	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|156aa|down_8|NC_021236.1_498735_499203_+	pfam13274, DUF4065, Protein of unknown function (DUF4065)	NA|57aa|down_9|NC_021236.1_499233_499404_+	NA
GCF_000397185.1_ASM39718v1	NC_021236	Strawberry lethal yellows phytoplasma (CPA) str. NZSb11, complete sequence	4	530513-530770	4	PILER-CR	no		RT,DEDDh,cas3	Orphan	TTTACCTGTTTGAGGGTCGTATTC	24	0	0	NA	NA	NA	3	3	Orphan	RT,DEDDh,cas3	NA|186aa|up_8|NC_021236.1_517968_518526_+,NA|211aa|up_6|NC_021236.1_519056_519689_+,NA|90aa|up_4|NC_021236.1_522978_523248_-,NA|569aa|up_3|NC_021236.1_523967_525674_-,NA|499aa|up_2|NC_021236.1_527505_529002_-,NA|55aa|up_0|NC_021236.1_529964_530129_-,NA|177aa|down_3|NC_021236.1_535815_536346_-,NA|108aa|down_4|NC_021236.1_536447_536771_-,NA|147aa|down_6|NC_021236.1_537015_537456_-,NA|73aa|down_7|NC_021236.1_537478_537697_-,NA|57aa|down_9|NC_021236.1_538694_538865_-	NA|123aa|up_9|NC_021236.1_517095_517464_+	pfam12113, SVM_signal, SVM protein signal sequence	NA|186aa|up_8|NC_021236.1_517968_518526_+	NA	NA|153aa|up_7|NC_021236.1_518561_519020_+	COG3600, GepA, Uncharacterized phage-associated protein [Function unknown]	NA|211aa|up_6|NC_021236.1_519056_519689_+	NA	NA|318aa|up_5|NC_021236.1_521258_522212_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|90aa|up_4|NC_021236.1_522978_523248_-	NA	NA|569aa|up_3|NC_021236.1_523967_525674_-	NA	NA|499aa|up_2|NC_021236.1_527505_529002_-	NA	NA|194aa|up_1|NC_021236.1_529210_529792_-	COG3600, GepA, Uncharacterized phage-associated protein [Function unknown]	NA|55aa|up_0|NC_021236.1_529964_530129_-	NA	NA|287aa|down_0|NC_021236.1_531964_532825_-	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|548aa|down_1|NC_021236.1_532917_534561_-	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	NA|398aa|down_2|NC_021236.1_534563_535757_-	COG0464, SpoVK, ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones]	NA|177aa|down_3|NC_021236.1_535815_536346_-	NA	NA|108aa|down_4|NC_021236.1_536447_536771_-	NA	NA|78aa|down_5|NC_021236.1_536789_537023_-	pfam15176, LRR19-TM, Leucine-rich repeat family 19 TM domain	NA|147aa|down_6|NC_021236.1_537015_537456_-	NA	NA|73aa|down_7|NC_021236.1_537478_537697_-	NA	NA|210aa|down_8|NC_021236.1_537849_538479_-	pfam02384, N6_Mtase, N-6 DNA Methylase	NA|57aa|down_9|NC_021236.1_538694_538865_-	NA
GCF_000397185.1_ASM39718v1	NC_021236	Strawberry lethal yellows phytoplasma (CPA) str. NZSb11, complete sequence	5	816133-816313	5	PILER-CR	no		RT,DEDDh,cas3	Orphan	TTTGGTTTTGTTGCCTGTTTGGGGGTTGTATTCGGTGAT	39	1	4	816172-816210|816172-816210|816172-816210|816172-816210	NC_021236.1_814936-814974|NC_021236.1_540274-540312|NC_021236.1_597604-597566|NC_021236.1_829025-828987	NA	2	2	Orphan	RT,DEDDh,cas3	NA|255aa|up_9|NC_021236.1_808179_808944_-,NA|103aa|up_8|NC_021236.1_808971_809280_-,NA|44aa|up_4|NC_021236.1_812908_813040_-,NA|147aa|up_2|NC_021236.1_813395_813836_-,NA|84aa|up_1|NC_021236.1_813965_814217_-,NA	NA|255aa|up_9|NC_021236.1_808179_808944_-	NA	NA|103aa|up_8|NC_021236.1_808971_809280_-	NA	NA|750aa|up_7|NC_021236.1_809276_811526_-	pfam00004, AAA, ATPase family associated with various cellular activities (AAA)	NA|210aa|up_6|NC_021236.1_811686_812316_-	pfam02384, N6_Mtase, N-6 DNA Methylase	NA|157aa|up_5|NC_021236.1_812435_812906_-	COG3600, GepA, Uncharacterized phage-associated protein [Function unknown]	NA|44aa|up_4|NC_021236.1_812908_813040_-	NA	NA|77aa|up_3|NC_021236.1_813172_813403_-	pfam15176, LRR19-TM, Leucine-rich repeat family 19 TM domain	NA|147aa|up_2|NC_021236.1_813395_813836_-	NA	NA|84aa|up_1|NC_021236.1_813965_814217_-	NA	NA|106aa|up_0|NC_021236.1_814239_814557_-	cd00591, HU_IHF, DNA sequence specific (IHF) and non-specific (HU) domains	NA|156aa|down_0|NC_021236.1_816818_817286_-	COG3600, GepA, Uncharacterized phage-associated protein [Function unknown]	NA|128aa|down_1|NC_021236.1_817384_817768_-	pfam11178, DUF2963, Protein of unknown function (DUF2963)	NA|216aa|down_2|NC_021236.1_817786_818434_-	cd01672, TMPK, Thymidine monophosphate kinase (TMPK), also known as thymidylate kinase, catalyzes the phosphorylation of thymidine monophosphate (TMP) to thymidine diphosphate (TDP) utilizing ATP as its preferred phophoryl donor	NA|211aa|down_3|NC_021236.1_818423_819056_-	COG3839, MalK, ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]	NA|218aa|down_4|NC_021236.1_819419_820073_+	TIGR02980, SigBFG, RNA polymerase sigma-70 factor, sigma-B/F/G subfamily	NA|78aa|down_5|NC_021236.1_820074_820308_+	pfam11178, DUF2963, Protein of unknown function (DUF2963)	NA|156aa|down_6|NC_021236.1_820409_820877_+	pfam13274, DUF4065, Protein of unknown function (DUF4065)	NA|419aa|down_7|NC_021236.1_821100_822357_+	COG0270, Dcm, Site-specific DNA methylase [DNA replication, recombination, and repair]	NA|158aa|down_8|NC_021236.1_822417_822891_+	COG3600, GepA, Uncharacterized phage-associated protein [Function unknown]	NA|429aa|down_9|NC_021236.1_823305_824592_+	TIGR00665, DnaB, replicative DNA helicase
GCF_000397185.1_ASM39718v1	NC_021236	Strawberry lethal yellows phytoplasma (CPA) str. NZSb11, complete sequence	6	842892-842996	1	CRISPRCasFinder	no		RT,DEDDh,cas3	Orphan	ACCCTCAAACAGGCAACAAAACCAAAA	27	0	0	NA	NA	NA	1	1	Orphan	RT,DEDDh,cas3	NA|108aa|up_9|NC_021236.1_832520_832844_+,NA|177aa|up_8|NC_021236.1_832945_833476_+,NA|186aa|up_4|NC_021236.1_837273_837831_+,NA|200aa|up_2|NC_021236.1_838360_838960_+,NA|563aa|up_1|NC_021236.1_839266_840955_+,NA|27aa|down_3|NC_021236.1_845743_845824_+,NA|68aa|down_4|NC_021236.1_846118_846322_+	NA|108aa|up_9|NC_021236.1_832520_832844_+	NA	NA|177aa|up_8|NC_021236.1_832945_833476_+	NA	NA|382aa|up_7|NC_021236.1_833534_834680_+	COG0464, SpoVK, ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones]	NA|548aa|up_6|NC_021236.1_834682_836326_+	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	NA|277aa|up_5|NC_021236.1_836418_837249_+	TIGR02169, chromosome_segregation_protein_related_ptotein, chromosome segregation protein SMC, primarily archaeal type	NA|186aa|up_4|NC_021236.1_837273_837831_+	NA	NA|157aa|up_3|NC_021236.1_837866_838337_+	COG3600, GepA, Uncharacterized phage-associated protein [Function unknown]	NA|200aa|up_2|NC_021236.1_838360_838960_+	NA	NA|563aa|up_1|NC_021236.1_839266_840955_+	NA	NA|226aa|up_0|NC_021236.1_841830_842508_+	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|438aa|down_0|NC_021236.1_843121_844435_+	TIGR00665, DnaB, replicative DNA helicase	NA|211aa|down_1|NC_021236.1_844450_845083_+	COG3839, MalK, ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]	NA|216aa|down_2|NC_021236.1_845072_845720_+	cd01672, TMPK, Thymidine monophosphate kinase (TMPK), also known as thymidylate kinase, catalyzes the phosphorylation of thymidine monophosphate (TMP) to thymidine diphosphate (TDP) utilizing ATP as its preferred phophoryl donor	NA|27aa|down_3|NC_021236.1_845743_845824_+	NA	NA|68aa|down_4|NC_021236.1_846118_846322_+	NA	NA|271aa|down_5|NC_021236.1_846296_847109_+	TIGR00571, DNA_adenine_methylase, DNA adenine methylase (dam)	NA|172aa|down_6|NC_021236.1_847173_847689_+	pfam11178, DUF2963, Protein of unknown function (DUF2963)	NA|254aa|down_7|NC_021236.1_847721_848483_+	pfam11178, DUF2963, Protein of unknown function (DUF2963)	NA|98aa|down_8|NC_021236.1_848502_848796_+	cd13831, HU, histone-like DNA-binding protein HU	NA|210aa|down_9|NC_021236.1_848819_849449_+	pfam02384, N6_Mtase, N-6 DNA Methylase
