bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NC_020568	Staphylococcus aureus subsp. aureus ST228, complete genome	1.1|164180|33|NC_020568|CRISPRCasFinder	NC_020568.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.94	33	2	0	1	33	801133	801101	164154-164238|403438-403539|754596-754678|795543-795621|852436-852517|1327147-1327236|1596926-1597010|2155867-2155947|2168188-2168273|2276231-2276311	9e-08	47.5	1.0	TGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	801101-801133	ATTGGAAATCCAATTTCTCTGTGTTGGGGCCCA	2
NC_020568	Staphylococcus aureus subsp. aureus ST228, complete genome	1.1|164180|33|NC_020568|CRISPRCasFinder	NC_020568.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.94	33	2	0	1	33	801192	801160	164154-164238|403438-403539|754596-754678|795543-795621|852436-852517|1327147-1327236|1596926-1597010|2155867-2155947|2168188-2168273|2276231-2276311	9e-08	47.5	1.0	TGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	801160-801192	ATTGGAAATCCAATTTCTCTGTGTTGGGGCCCA	2
NC_020568	Staphylococcus aureus subsp. aureus ST228, complete genome	1.1|164180|33|NC_020568|CRISPRCasFinder	NC_020568.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.94	33	2	0	1	33	1415476	1415444	164154-164238|403438-403539|754596-754678|795543-795621|852436-852517|1327147-1327236|1596926-1597010|2155867-2155947|2168188-2168273|2276231-2276311	9e-08	47.5	1.0	TGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	1415444-1415476	ATTGGGAATACAATTTCTCTTTGTTGGGGTCCA	2
NC_020568	Staphylococcus aureus subsp. aureus ST228, complete genome	4.1|795567|31|NC_020568|CRISPRCasFinder	NC_020568.1	Staphylococcus aureus subsp. aureus ST228, complete genome	100.00	31	0	0	1	31	287382	287352	164154-164238|403438-403539|754596-754678|795543-795621|852436-852517|1327147-1327236|1596926-1597010|2155867-2155947|2168188-2168273|2276231-2276311	9e-09	50.7	1.0	CTGTGTTGGGGCCCCGCCAACTTGCATTGCC	287352-287382	GGCAATGCAAGTTGGCGGGGCCCCAACACAG	0
NC_020568	Staphylococcus aureus subsp. aureus ST228, complete genome	4.1|795567|31|NC_020568|CRISPRCasFinder	NC_020568.1	Staphylococcus aureus subsp. aureus ST228, complete genome	96.77	31	1	0	1	31	287327	287297	164154-164238|403438-403539|754596-754678|795543-795621|852436-852517|1327147-1327236|1596926-1597010|2155867-2155947|2168188-2168273|2276231-2276311	8e-08	47.5	1.0	CTGTGTTGGGGCCCCGCCAACTTGCATTGCC	287297-287327	GGTAATGCAAGTTGGCGGGGCCCCAACACAG	1
NC_020568	Staphylococcus aureus subsp. aureus ST228, complete genome	4.1|795567|31|NC_020568|CRISPRCasFinder	NC_020568.1	Staphylococcus aureus subsp. aureus ST228, complete genome	96.77	31	1	0	1	31	1631408	1631438	164154-164238|403438-403539|754596-754678|795543-795621|852436-852517|1327147-1327236|1596926-1597010|2155867-2155947|2168188-2168273|2276231-2276311	8e-08	47.5	1.0	CTGTGTTGGGGCCCCGCCAACTTGCATTGCC	1631408-1631438	CTGTGTTGGGGCCCCGCCAACTTCCATTGCC	1
NC_020568	Staphylococcus aureus subsp. aureus ST228, complete genome	7.1|1596952|33|NC_020568|CRISPRCasFinder	NC_020568.1	Staphylococcus aureus subsp. aureus ST228, complete genome	96.97	33	1	0	1	33	801101	801133	164154-164238|403438-403539|754596-754678|795543-795621|852436-852517|1327147-1327236|1596926-1597010|2155867-2155947|2168188-2168273|2276231-2276311	1e-08	50.7	1.0	ATTGGGAATCCAATTTCTCTGTGTTGGGGCCCA	801101-801133	ATTGGAAATCCAATTTCTCTGTGTTGGGGCCCA	1
NC_020568	Staphylococcus aureus subsp. aureus ST228, complete genome	7.1|1596952|33|NC_020568|CRISPRCasFinder	NC_020568.1	Staphylococcus aureus subsp. aureus ST228, complete genome	96.97	33	1	0	1	33	801160	801192	164154-164238|403438-403539|754596-754678|795543-795621|852436-852517|1327147-1327236|1596926-1597010|2155867-2155947|2168188-2168273|2276231-2276311	1e-08	50.7	1.0	ATTGGGAATCCAATTTCTCTGTGTTGGGGCCCA	801160-801192	ATTGGAAATCCAATTTCTCTGTGTTGGGGCCCA	1
NC_020568	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276256|31|NC_020568|CRISPRCasFinder	NC_020568.1	Staphylococcus aureus subsp. aureus ST228, complete genome	96.77	31	1	0	1	31	808247	808277	164154-164238|403438-403539|754596-754678|795543-795621|852436-852517|1327147-1327236|1596926-1597010|2155867-2155947|2168188-2168273|2276231-2276311	8e-08	47.5	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	808247-808277	CACATTATTGTAAGCTGACTTTCCGTCAGCT	1
NC_020568	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276256|31|NC_020568|CRISPRCasFinder	NC_020568.1	Staphylococcus aureus subsp. aureus ST228, complete genome	96.77	31	1	0	1	31	808303	808333	164154-164238|403438-403539|754596-754678|795543-795621|852436-852517|1327147-1327236|1596926-1597010|2155867-2155947|2168188-2168273|2276231-2276311	8e-08	47.5	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	808303-808333	CACATTATTGTAAGCTGACTTTCCGTCAGCT	1
NC_020568	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276256|31|NC_020568|CRISPRCasFinder	NC_020568.1	Staphylococcus aureus subsp. aureus ST228, complete genome	96.77	31	1	0	1	31	808359	808389	164154-164238|403438-403539|754596-754678|795543-795621|852436-852517|1327147-1327236|1596926-1597010|2155867-2155947|2168188-2168273|2276231-2276311	8e-08	47.5	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	808359-808389	CACATTATTGTAAGCTGACTTTCCGTCAGCT	1
NC_020568	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276256|31|NC_020568|CRISPRCasFinder	NC_020568.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	65643	65673	164154-164238|403438-403539|754596-754678|795543-795621|852436-852517|1327147-1327236|1596926-1597010|2155867-2155947|2168188-2168273|2276231-2276311	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	65643-65673	CACATTATTGTAAGCTGACTTTCCGCCAGCT	2
NC_020568	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276256|31|NC_020568|CRISPRCasFinder	NC_020568.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	363205	363175	164154-164238|403438-403539|754596-754678|795543-795621|852436-852517|1327147-1327236|1596926-1597010|2155867-2155947|2168188-2168273|2276231-2276311	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	363175-363205	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NC_020568	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276256|31|NC_020568|CRISPRCasFinder	NC_020568.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	629387	629357	164154-164238|403438-403539|754596-754678|795543-795621|852436-852517|1327147-1327236|1596926-1597010|2155867-2155947|2168188-2168273|2276231-2276311	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	629357-629387	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NC_020568	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276256|31|NC_020568|CRISPRCasFinder	NC_020568.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	808414	808444	164154-164238|403438-403539|754596-754678|795543-795621|852436-852517|1327147-1327236|1596926-1597010|2155867-2155947|2168188-2168273|2276231-2276311	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	808414-808444	CACATTATCGTAAGCTGACTTTCCGTCAGCT	2
NC_020568	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276256|31|NC_020568|CRISPRCasFinder	NC_020568.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	852771	852801	164154-164238|403438-403539|754596-754678|795543-795621|852436-852517|1327147-1327236|1596926-1597010|2155867-2155947|2168188-2168273|2276231-2276311	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	852771-852801	CACATTATTGTAAGCTGACTTTCCGCCAGCT	2
NC_020568	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276256|31|NC_020568|CRISPRCasFinder	NC_020568.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	1121126	1121096	164154-164238|403438-403539|754596-754678|795543-795621|852436-852517|1327147-1327236|1596926-1597010|2155867-2155947|2168188-2168273|2276231-2276311	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1121096-1121126	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NC_020568	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276256|31|NC_020568|CRISPRCasFinder	NC_020568.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	1327168	1327138	164154-164238|403438-403539|754596-754678|795543-795621|852436-852517|1327147-1327236|1596926-1597010|2155867-2155947|2168188-2168273|2276231-2276311	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1327138-1327168	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NC_020568	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276256|31|NC_020568|CRISPRCasFinder	NC_020568.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	1415488	1415518	164154-164238|403438-403539|754596-754678|795543-795621|852436-852517|1327147-1327236|1596926-1597010|2155867-2155947|2168188-2168273|2276231-2276311	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1415488-1415518	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NC_020568	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276256|31|NC_020568|CRISPRCasFinder	NC_020568.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	1611620	1611590	164154-164238|403438-403539|754596-754678|795543-795621|852436-852517|1327147-1327236|1596926-1597010|2155867-2155947|2168188-2168273|2276231-2276311	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1611590-1611620	AGCTGGCGGAAAGTCAGCTTACAATAATGTG	2
NC_020568	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276256|31|NC_020568|CRISPRCasFinder	NC_020568.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	1928939	1928969	164154-164238|403438-403539|754596-754678|795543-795621|852436-852517|1327147-1327236|1596926-1597010|2155867-2155947|2168188-2168273|2276231-2276311	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1928939-1928969	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NC_020568	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276256|31|NC_020568|CRISPRCasFinder	NC_020568.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	2265455	2265485	164154-164238|403438-403539|754596-754678|795543-795621|852436-852517|1327147-1327236|1596926-1597010|2155867-2155947|2168188-2168273|2276231-2276311	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	2265455-2265485	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NC_020568	Staphylococcus aureus subsp. aureus ST228, complete genome	10.1|2276256|31|NC_020568|CRISPRCasFinder	NC_020568.1	Staphylococcus aureus subsp. aureus ST228, complete genome	93.55	31	2	0	1	31	2440772	2440802	164154-164238|403438-403539|754596-754678|795543-795621|852436-852517|1327147-1327236|1596926-1597010|2155867-2155947|2168188-2168273|2276231-2276311	7e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	2440772-2440802	CACATTATTGTAAGCTGACTTTCCGCCAGCT	2
