bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NC_020559	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	1.2|334218|17|NC_020559|PILER-CR	NC_020559.1	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	94.12	17	1	0	1	17	840558	840542	334145-334256|366833-367531|692990-693066|962068-962319|1090695-1090856|1094365-1094525|1625752-1625836|1625920-1626022|1626133-1626474|2052494-2053060|2079108-2079362|2159909-2160128|3105878-3106794|3108130-3109998|3723832-3724373|3829797-3829886|4091415-4091503	0.41	25.4	1.0	CGCTGGCGCCGCCGTCA	840542-840558	TGACGGCGGCGCCGGCG	1
NC_020559	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	1.2|334218|17|NC_020559|PILER-CR	NC_020559.1	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	94.12	17	1	0	1	17	1188645	1188661	334145-334256|366833-367531|692990-693066|962068-962319|1090695-1090856|1094365-1094525|1625752-1625836|1625920-1626022|1626133-1626474|2052494-2053060|2079108-2079362|2159909-2160128|3105878-3106794|3108130-3109998|3723832-3724373|3829797-3829886|4091415-4091503	0.41	25.4	1.0	CGCTGGCGCCGCCGTCA	1188645-1188661	CGCCGGCGCCGCCGTCA	1
NC_020559	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	1.2|334218|17|NC_020559|PILER-CR	NC_020559.1	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	94.12	17	1	0	1	17	1211982	1211966	334145-334256|366833-367531|692990-693066|962068-962319|1090695-1090856|1094365-1094525|1625752-1625836|1625920-1626022|1626133-1626474|2052494-2053060|2079108-2079362|2159909-2160128|3105878-3106794|3108130-3109998|3723832-3724373|3829797-3829886|4091415-4091503	0.41	25.4	1.0	CGCTGGCGCCGCCGTCA	1211966-1211982	TGGCGGCGGCGCCAGCG	1
NC_020559	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	1.2|334218|17|NC_020559|PILER-CR	NC_020559.1	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	94.12	17	1	0	1	17	2416485	2416501	334145-334256|366833-367531|692990-693066|962068-962319|1090695-1090856|1094365-1094525|1625752-1625836|1625920-1626022|1626133-1626474|2052494-2053060|2079108-2079362|2159909-2160128|3105878-3106794|3108130-3109998|3723832-3724373|3829797-3829886|4091415-4091503	0.41	25.4	1.0	CGCTGGCGCCGCCGTCA	2416485-2416501	CGCCGGCGCCGCCGTCA	1
NC_020559	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	1.2|334218|17|NC_020559|PILER-CR	NC_020559.1	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	94.12	17	1	0	1	17	2792776	2792792	334145-334256|366833-367531|692990-693066|962068-962319|1090695-1090856|1094365-1094525|1625752-1625836|1625920-1626022|1626133-1626474|2052494-2053060|2079108-2079362|2159909-2160128|3105878-3106794|3108130-3109998|3723832-3724373|3829797-3829886|4091415-4091503	0.41	25.4	1.0	CGCTGGCGCCGCCGTCA	2792776-2792792	CGCCGGCGCCGCCGTCA	1
NC_020559	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	1.2|334218|17|NC_020559|PILER-CR	NC_020559.1	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	94.12	17	1	0	1	17	4018008	4018024	334145-334256|366833-367531|692990-693066|962068-962319|1090695-1090856|1094365-1094525|1625752-1625836|1625920-1626022|1626133-1626474|2052494-2053060|2079108-2079362|2159909-2160128|3105878-3106794|3108130-3109998|3723832-3724373|3829797-3829886|4091415-4091503	0.41	25.4	1.0	CGCTGGCGCCGCCGTCA	4018008-4018024	CGCCGGCGCCGCCGTCA	1
NC_020559	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	2.5|367121|42|NC_020559|CRISPRCasFinder	NC_020559.1	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	95.24	42	2	0	1	42	375152	375193	334145-334256|366833-367531|692990-693066|962068-962319|1090695-1090856|1094365-1094525|1625752-1625836|1625920-1626022|1626133-1626474|2052494-2053060|2079108-2079362|2159909-2160128|3105878-3106794|3108130-3109998|3723832-3724373|3829797-3829886|4091415-4091503	2e-11	61.8	1.0	CCGGTGCCCGAGTTGAAGAACCCGATGTTTCCGCTGCCGGAG	375152-375193	CCGGTGCCCGAGTTGAACAACCCGACGTTTCCGCTGCCGGAG	2
NC_020559	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	2.6|367196|33|NC_020559|CRISPRCasFinder	NC_020559.1	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	93.94	33	2	0	1	33	373967	373999	334145-334256|366833-367531|692990-693066|962068-962319|1090695-1090856|1094365-1094525|1625752-1625836|1625920-1626022|1626133-1626474|2052494-2053060|2079108-2079362|2159909-2160128|3105878-3106794|3108130-3109998|3723832-3724373|3829797-3829886|4091415-4091503	1e-07	47.5	1.0	AGGCTGCCGATCCCGATCTGGCCGTTGCCGGTG	373967-373999	AGGCTGCCGAACCCGATCTGGCCGCTGCCGGTG	2
NC_020559	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	4.2|962241|56|NC_020559|PILER-CR	NC_020559.1	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	98.21	56	1	0	1	56	962369	962424	334145-334256|366833-367531|692990-693066|962068-962319|1090695-1090856|1094365-1094525|1625752-1625836|1625920-1626022|1626133-1626474|2052494-2053060|2079108-2079362|2159909-2160128|3105878-3106794|3108130-3109998|3723832-3724373|3829797-3829886|4091415-4091503	7e-19	87.2	1.0	AGCTGCCGGGAGGGGTTCACCCAGCGGCGCGGGCAGGTCGTTTACGGCAAGTTCCA	962369-962424	AGCTGCCGGGAGGGGTTCACCCAGCGGTGCGGGCAGGTCGTTTACGGCAAGTTCCA	1
NC_020559	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	9.4|1626376|18|NC_020559|CRISPRCasFinder	NC_020559.1	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	94.44	18	1	0	1	18	1217165	1217148	334145-334256|366833-367531|692990-693066|962068-962319|1090695-1090856|1094365-1094525|1625752-1625836|1625920-1626022|1626133-1626474|2052494-2053060|2079108-2079362|2159909-2160128|3105878-3106794|3108130-3109998|3723832-3724373|3829797-3829886|4091415-4091503	0.14	26.9	1.0	GCCGCCATTGCCGACCAG	1217148-1217165	CTGTTCGGCAATGGCGGC	1
NC_020559	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	9.4|1626376|18|NC_020559|CRISPRCasFinder	NC_020559.1	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	94.44	18	1	0	1	18	1611814	1611831	334145-334256|366833-367531|692990-693066|962068-962319|1090695-1090856|1094365-1094525|1625752-1625836|1625920-1626022|1626133-1626474|2052494-2053060|2079108-2079362|2159909-2160128|3105878-3106794|3108130-3109998|3723832-3724373|3829797-3829886|4091415-4091503	0.14	26.9	1.0	GCCGCCATTGCCGACCAG	1611814-1611831	GCCGCCATTGCCGAACAG	1
NC_020559	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	9.4|1626376|18|NC_020559|CRISPRCasFinder	NC_020559.1	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	94.44	18	1	0	1	18	1629522	1629539	334145-334256|366833-367531|692990-693066|962068-962319|1090695-1090856|1094365-1094525|1625752-1625836|1625920-1626022|1626133-1626474|2052494-2053060|2079108-2079362|2159909-2160128|3105878-3106794|3108130-3109998|3723832-3724373|3829797-3829886|4091415-4091503	0.14	26.9	1.0	GCCGCCATTGCCGACCAG	1629522-1629539	GCCGCCGTTGCCGACCAG	1
NC_020559	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	9.4|1626376|18|NC_020559|CRISPRCasFinder	NC_020559.1	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	94.44	18	1	0	1	18	1649124	1649141	334145-334256|366833-367531|692990-693066|962068-962319|1090695-1090856|1094365-1094525|1625752-1625836|1625920-1626022|1626133-1626474|2052494-2053060|2079108-2079362|2159909-2160128|3105878-3106794|3108130-3109998|3723832-3724373|3829797-3829886|4091415-4091503	0.14	26.9	1.0	GCCGCCATTGCCGACCAG	1649124-1649141	GCCGCCATTGCCGATCAG	1
NC_020559	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	9.4|1626376|18|NC_020559|CRISPRCasFinder	NC_020559.1	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	94.44	18	1	0	1	18	1993584	1993567	334145-334256|366833-367531|692990-693066|962068-962319|1090695-1090856|1094365-1094525|1625752-1625836|1625920-1626022|1626133-1626474|2052494-2053060|2079108-2079362|2159909-2160128|3105878-3106794|3108130-3109998|3723832-3724373|3829797-3829886|4091415-4091503	0.14	26.9	1.0	GCCGCCATTGCCGACCAG	1993567-1993584	CTGGTCGGCAACGGCGGC	1
NC_020559	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	9.4|1626376|18|NC_020559|CRISPRCasFinder	NC_020559.1	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	94.44	18	1	0	1	18	2052403	2052420	334145-334256|366833-367531|692990-693066|962068-962319|1090695-1090856|1094365-1094525|1625752-1625836|1625920-1626022|1626133-1626474|2052494-2053060|2079108-2079362|2159909-2160128|3105878-3106794|3108130-3109998|3723832-3724373|3829797-3829886|4091415-4091503	0.14	26.9	1.0	GCCGCCATTGCCGACCAG	2052403-2052420	GCCGCCGTTGCCGACCAG	1
NC_020559	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	9.4|1626376|18|NC_020559|CRISPRCasFinder	NC_020559.1	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	94.44	18	1	0	1	18	3784397	3784380	334145-334256|366833-367531|692990-693066|962068-962319|1090695-1090856|1094365-1094525|1625752-1625836|1625920-1626022|1626133-1626474|2052494-2053060|2079108-2079362|2159909-2160128|3105878-3106794|3108130-3109998|3723832-3724373|3829797-3829886|4091415-4091503	0.14	26.9	1.0	GCCGCCATTGCCGACCAG	3784380-3784397	CTGGTCGGCGATGGCGGC	1
NC_020559	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	10.4|2052678|20|NC_020559|CRISPRCasFinder	NC_020559.1	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	90.00	20	2	0	1	20	924871	924852	334145-334256|366833-367531|692990-693066|962068-962319|1090695-1090856|1094365-1094525|1625752-1625836|1625920-1626022|1626133-1626474|2052494-2053060|2079108-2079362|2159909-2160128|3105878-3106794|3108130-3109998|3723832-3724373|3829797-3829886|4091415-4091503	0.14	26.9	1.0	CGGCGCCTACCAGCAGGCCG	924852-924871	CGGCCTGCTGGTCGGCTCCG	2
NC_020559	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	10.5|2052726|20|NC_020559|CRISPRCasFinder	NC_020559.1	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	90.00	20	2	0	1	20	2450441	2450422	334145-334256|366833-367531|692990-693066|962068-962319|1090695-1090856|1094365-1094525|1625752-1625836|1625920-1626022|1626133-1626474|2052494-2053060|2079108-2079362|2159909-2160128|3105878-3106794|3108130-3109998|3723832-3724373|3829797-3829886|4091415-4091503	0.14	26.9	1.0	CCACGCCGAAGAACAACCCG	2450422-2450441	CGGGCTGTCCTTCGGCGTGG	2
NC_020559	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	10.9|2052917|20|NC_020559|CRISPRCasFinder	NC_020559.1	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	90.00	20	2	0	1	20	1489370	1489389	334145-334256|366833-367531|692990-693066|962068-962319|1090695-1090856|1094365-1094525|1625752-1625836|1625920-1626022|1626133-1626474|2052494-2053060|2079108-2079362|2159909-2160128|3105878-3106794|3108130-3109998|3723832-3724373|3829797-3829886|4091415-4091503	0.14	26.9	1.0	AGAGCAGCCCGCCGGCCCCG	1489370-1489389	AGAACAGCCCGCCGCCCCCG	2
NC_020559	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	10.9|2052917|20|NC_020559|CRISPRCasFinder	NC_020559.1	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	90.00	20	2	0	1	20	1847703	1847722	334145-334256|366833-367531|692990-693066|962068-962319|1090695-1090856|1094365-1094525|1625752-1625836|1625920-1626022|1626133-1626474|2052494-2053060|2079108-2079362|2159909-2160128|3105878-3106794|3108130-3109998|3723832-3724373|3829797-3829886|4091415-4091503	0.14	26.9	1.0	AGAGCAGCCCGCCGGCCCCG	1847703-1847722	AGAGCAGCCCGCCGACGCCG	2
NC_020559	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	10.9|2052917|20|NC_020559|CRISPRCasFinder	NC_020559.1	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	90.00	20	2	0	1	20	2079785	2079804	334145-334256|366833-367531|692990-693066|962068-962319|1090695-1090856|1094365-1094525|1625752-1625836|1625920-1626022|1626133-1626474|2052494-2053060|2079108-2079362|2159909-2160128|3105878-3106794|3108130-3109998|3723832-3724373|3829797-3829886|4091415-4091503	0.14	26.9	1.0	AGAGCAGCCCGCCGGCCCCG	2079785-2079804	AGAGCAGTCCGCCGACCCCG	2
NC_020559	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	10.9|2052917|20|NC_020559|CRISPRCasFinder	NC_020559.1	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	90.00	20	2	0	1	20	2932221	2932240	334145-334256|366833-367531|692990-693066|962068-962319|1090695-1090856|1094365-1094525|1625752-1625836|1625920-1626022|1626133-1626474|2052494-2053060|2079108-2079362|2159909-2160128|3105878-3106794|3108130-3109998|3723832-3724373|3829797-3829886|4091415-4091503	0.14	26.9	1.0	AGAGCAGCCCGCCGGCCCCG	2932221-2932240	AGAGTAGCCCGCCGGCGCCG	2
NC_020559	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	11.2|2079189|18|NC_020559|CRT	NC_020559.1	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	94.44	18	1	0	1	18	401448	401431	334145-334256|366833-367531|692990-693066|962068-962319|1090695-1090856|1094365-1094525|1625752-1625836|1625920-1626022|1626133-1626474|2052494-2053060|2079108-2079362|2159909-2160128|3105878-3106794|3108130-3109998|3723832-3724373|3829797-3829886|4091415-4091503	0.14	26.9	1.0	GATCAGCCCGACGGCGTT	401431-401448	AACGCCGACGGGCTGATC	1
NC_020559	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	11.2|2079189|18|NC_020559|CRT	NC_020559.1	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	94.44	18	1	0	1	18	609032	609015	334145-334256|366833-367531|692990-693066|962068-962319|1090695-1090856|1094365-1094525|1625752-1625836|1625920-1626022|1626133-1626474|2052494-2053060|2079108-2079362|2159909-2160128|3105878-3106794|3108130-3109998|3723832-3724373|3829797-3829886|4091415-4091503	0.14	26.9	1.0	GATCAGCCCGACGGCGTT	609015-609032	AACGCCGACGGGCTGATC	1
NC_020559	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	11.4|2079279|18|NC_020559|CRT	NC_020559.1	Mycobacterium tuberculosis str. Erdman = ATCC 35801 chromosome 1, complete sequence	94.44	18	1	0	1	18	3436474	3436457	334145-334256|366833-367531|692990-693066|962068-962319|1090695-1090856|1094365-1094525|1625752-1625836|1625920-1626022|1626133-1626474|2052494-2053060|2079108-2079362|2159909-2160128|3105878-3106794|3108130-3109998|3723832-3724373|3829797-3829886|4091415-4091503	0.14	26.9	1.0	GATCAGCGTCCCGCCGGT	3436457-3436474	ACCAGCGGGACGCTGATC	1
