The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP017432	Pseudomonas sp. Lz4W chromosome, complete genome	5018820	368752	413766	5018820	protease,holin	Catovirus(20.0%)	40	NA	NA
WP_004419586.1|368752_370456_-|holin	choline dehydrogenase	holin	A0A1V0S9M4	Catovirus	28.6	8.0e-48
WP_004419584.1|370574_372047_-	betaine-aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_004419582.1|372156_372750_-	transcriptional regulator BetI	NA	NA	NA	NA	NA
WP_004419581.1|373146_375144_+	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	26.7	7.0e-19
WP_004419578.1|375236_376415_-|holin	choline ABC transporter ATP-binding protein	holin	G3M9Y6	Bacillus_virus	36.5	2.9e-25
WP_004419575.1|376411_377257_-|holin	choline ABC transporter permease subunit	holin	NA	NA	NA	NA
WP_004419573.1|377325_378273_-|holin	choline ABC transporter substrate-binding protein	holin	NA	NA	NA	NA
WP_004419571.1|378632_380009_+	L-serine ammonia-lyase	NA	NA	NA	NA	NA
WP_004419569.1|380445_381549_+	GlxA family transcriptional regulator	NA	NA	NA	NA	NA
WP_004419567.1|381653_381911_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004419565.1|382146_382629_-	thioesterase family protein	NA	NA	NA	NA	NA
WP_004419563.1|382641_383607_-	L-carnitine dehydrogenase	NA	NA	NA	NA	NA
WP_004419561.1|383738_384626_-	3-keto-5-aminohexanoate cleavage protein	NA	NA	NA	NA	NA
WP_004419560.1|384699_385626_-|holin	choline ABC transporter substrate-binding protein	holin	NA	NA	NA	NA
WP_004419558.1|385791_386727_+	GlxA family transcriptional regulator	NA	NA	NA	NA	NA
WP_004419555.1|386723_387140_-	DUF3010 family protein	NA	NA	NA	NA	NA
WP_004419553.1|387188_387590_-	DUF1311 domain-containing protein	NA	NA	NA	NA	NA
WP_004419552.1|387809_388787_+	membrane dipeptidase	NA	NA	NA	NA	NA
WP_004419551.1|388916_389447_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004419549.1|389462_391523_+	dimethylglycine demethylation protein DgcA	NA	NA	NA	NA	NA
WP_004419546.1|391648_393592_+	dimethylglycine demethylation protein DgcB	NA	NA	NA	NA	NA
WP_004419543.1|393588_394800_+	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA	NA
WP_004419540.1|394903_395674_+	electron transfer flavoprotein subunit beta	NA	NA	NA	NA	NA
WP_004419538.1|396170_397463_-	glycine-betaine demethylase subunit GbcA	NA	NA	NA	NA	NA
WP_004419536.1|397744_398845_+	glycine-betaine demethylase subunit GbcB	NA	NA	NA	NA	NA
WP_004419533.1|399026_399251_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004419530.1|399247_399550_+	cell division protein ZapA	NA	NA	NA	NA	NA
WP_004419528.1|399632_400676_-	low specificity L-threonine aldolase	NA	NA	NA	NA	NA
WP_004419526.1|400967_402221_+	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	53.9	4.3e-99
WP_004419522.1|402243_403494_+	sarcosine oxidase subunit beta	NA	NA	NA	NA	NA
WP_004419517.1|403508_403841_+	sarcosine oxidase subunit delta	NA	NA	NA	NA	NA
WP_004419514.1|403837_406855_+	sarcosine oxidase subunit alpha	NA	NA	NA	NA	NA
WP_004419513.1|406966_407599_+	sarcosine oxidase subunit gamma family protein	NA	NA	NA	NA	NA
WP_004419510.1|407690_408548_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_004419507.1|408654_409854_+	formaldehyde dehydrogenase, glutathione-independent	NA	A0A2K9L7I1	Tupanvirus	27.3	1.1e-11
WP_004419505.1|409897_410572_-	anti-sigma factor	NA	NA	NA	NA	NA
WP_085985557.1|410568_411201_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_004419500.1|411588_412146_+	DUF2780 domain-containing protein	NA	NA	NA	NA	NA
WP_004419497.1|412148_413036_-	acyltransferase	NA	NA	NA	NA	NA
WP_004419495.1|413265_413766_+|protease	ATP-dependent zinc protease	protease	NA	NA	NA	NA
>prophage 2
NZ_CP017432	Pseudomonas sp. Lz4W chromosome, complete genome	5018820	1780294	1858687	5018820	portal,integrase,holin,tail,terminase,head,capsid,plate,tRNA	Pseudomonas_phage(32.26%)	84	1779286:1779300	1860165:1860180
1779286:1779300	attL	CAAGGTCTTGAACGC	NA	NA	NA	NA
WP_003447309.1|1780294_1781776_+|tRNA	glutamate--tRNA ligase	tRNA	NA	NA	NA	NA
1779286:1779300	attL	CAAGGTCTTGAACGC	NA	NA	NA	NA
WP_003447310.1|1782719_1783154_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003447311.1|1783227_1784187_+|tRNA	tRNA-dihydrouridine synthase	tRNA	NA	NA	NA	NA
WP_003447312.1|1784309_1784762_+	Hsp20 family protein	NA	A0A218MMV3	uncultured_virus	39.1	2.4e-20
WP_029612469.1|1785042_1785981_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA	NA
WP_003447314.1|1786311_1787253_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_003447315.1|1787379_1787898_-	DNA starvation/stationary phase protection protein	NA	NA	NA	NA	NA
WP_003447316.1|1788105_1788801_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_003447318.1|1788797_1789109_+	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_003447320.1|1789352_1789547_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010656145.1|1789713_1790064_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003447322.1|1790293_1791112_+	shikimate 5-dehydrogenase	NA	NA	NA	NA	NA
WP_003447323.1|1791151_1791826_-	DUF480 domain-containing protein	NA	NA	NA	NA	NA
WP_003447324.1|1791939_1793256_-	MFS transporter	NA	NA	NA	NA	NA
WP_003447325.1|1793459_1794098_-	isochorismatase family protein	NA	NA	NA	NA	NA
WP_165439683.1|1794108_1794813_-	Asp/Glu racemase	NA	NA	NA	NA	NA
WP_003447327.1|1794900_1795713_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003447328.1|1795709_1796858_-	FAD-dependent monooxygenase	NA	NA	NA	NA	NA
WP_003447329.1|1797189_1798224_+	2,5-dihydroxypyridine 5,6-dioxygenase	NA	NA	NA	NA	NA
WP_003447331.1|1798365_1798830_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003447333.1|1799009_1799498_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_003447334.1|1799512_1803076_+	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003447335.1|1803069_1803729_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003447336.1|1803837_1805034_+	XdhC family protein	NA	NA	NA	NA	NA
WP_158525118.1|1805017_1806172_+	DUF1993 family protein	NA	NA	NA	NA	NA
WP_003447338.1|1806264_1807488_-	serine/threonine transporter SstT	NA	NA	NA	NA	NA
WP_003447339.1|1807856_1809014_+	MFS transporter	NA	NA	NA	NA	NA
WP_003447340.1|1809010_1809916_-	transcriptional activator NhaR	NA	NA	NA	NA	NA
WP_003447352.1|1810045_1810285_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003447353.1|1810315_1811071_+	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	39.0	2.4e-41
WP_003447354.1|1811167_1811335_-	hypothetical protein	NA	NA	NA	NA	NA
WP_177412992.1|1811558_1812239_+	peptidase C39 family protein	NA	NA	NA	NA	NA
WP_003447356.1|1812348_1813632_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_003447357.1|1814002_1815139_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A2H4J1K3	uncultured_Caudovirales_phage	79.9	2.9e-179
WP_003447360.1|1815138_1815372_-	hypothetical protein	NA	A0A2H4JA17	uncultured_Caudovirales_phage	84.4	2.7e-31
WP_003447362.1|1815922_1816195_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003447363.1|1816196_1817969_-	S-type pyocin domain-containing protein	NA	NA	NA	NA	NA
WP_003447364.1|1818778_1819162_-	LuxR family transcriptional regulator	NA	A0A2H4JA92	uncultured_Caudovirales_phage	53.7	1.1e-10
WP_003447365.1|1819581_1820670_-	type I restriction enzyme HsdR N-terminal domain-containing protein	NA	A0A1S5SAB0	Streptococcus_phage	42.6	1.2e-65
WP_003447366.1|1820695_1821451_-	LexA family transcriptional regulator	NA	A0A2D1GNH0	Pseudomonas_phage	41.3	9.6e-46
WP_003447369.1|1821547_1821769_+	helix-turn-helix domain-containing protein	NA	A0A2D1GND2	Pseudomonas_phage	60.3	1.5e-20
WP_003447370.1|1822002_1822776_+	hypothetical protein	NA	A0A2D1GNQ6	Pseudomonas_phage	49.5	3.4e-22
WP_003447371.1|1822772_1823468_+	hypothetical protein	NA	B5WZY0	Pseudomonas_phage	49.0	8.0e-47
WP_003447372.1|1823460_1823670_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003447373.1|1823666_1824962_+|integrase	site-specific integrase	integrase	A0A2D1GND4	Pseudomonas_phage	54.8	9.1e-129
WP_176464626.1|1824964_1825348_+	antitermination protein Q	NA	A0A1W6JTD2	Pseudomonas_phage	56.0	4.1e-37
WP_003447378.1|1825520_1826438_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037001968.1|1826566_1826896_+|holin	phage holin, lambda family	holin	A0A2D1GNJ3	Pseudomonas_phage	63.0	2.4e-33
WP_003447394.1|1826895_1827525_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003447395.1|1827664_1828270_+	hypothetical protein	NA	K4ICN8	Acidithiobacillus_phage	26.7	7.5e-09
WP_083912810.1|1828202_1830344_+|terminase	phage terminase large subunit family protein	terminase	K4I3Y9	Acidithiobacillus_phage	38.9	3.4e-96
WP_037001996.1|1830344_1830677_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003447402.1|1830717_1830987_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100917152.1|1830986_1832639_+|portal	phage portal protein	portal	A0A291AUL8	Sinorhizobium_phage	34.1	5.3e-81
1832217:1832231	attR	GCGTTCAAGACCTTG	NA	NA	NA	NA
WP_003447406.1|1832638_1833517_+	S49 family peptidase	NA	A0A1I9KF73	Aeromonas_phage	41.6	5.2e-51
1832217:1832231	attR	GCGTTCAAGACCTTG	NA	NA	NA	NA
WP_003447408.1|1833541_1834192_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003447410.1|1834219_1834915_+|head	head decoration protein	head	NA	NA	NA	NA
WP_003447412.1|1835002_1836082_+|capsid	major capsid protein	capsid	V5Q8G6	Xylella_phage	33.5	4.1e-50
WP_100917153.1|1836126_1836318_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003447416.1|1836317_1836653_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003447418.1|1836652_1837282_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003447420.1|1837290_1837521_+	DUF2635 domain-containing protein	NA	NA	NA	NA	NA
WP_003447422.1|1837517_1838996_+|tail	phage tail sheath subtilisin-like domain-containing protein	tail	B5TK67	Pseudomonas_phage	46.2	3.1e-109
WP_003447424.1|1839053_1839422_+|tail	phage tail tube protein	tail	NA	NA	NA	NA
WP_003447426.1|1839425_1839719_+|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_003447427.1|1839831_1841925_+	hypothetical protein	NA	Q4L1H3	Burkholderia_phage	22.9	9.6e-11
WP_003447429.1|1841921_1843352_+	DNA circularization N-terminal domain-containing protein	NA	A0A192Y5U9	Salmonella_phage	24.6	4.4e-23
WP_003447431.1|1843361_1843754_-	hypothetical protein	NA	NA	NA	NA	NA
WP_037001971.1|1843834_1844920_+|tail	phage tail protein	tail	B5TK72	Pseudomonas_phage	33.3	3.3e-39
WP_003447435.1|1844916_1845501_+|plate	phage baseplate assembly protein V	plate	NA	NA	NA	NA
WP_003447437.1|1845497_1845935_+	phage GP46 family protein	NA	A0A0C4UR04	Shigella_phage	42.1	3.3e-22
WP_003447439.1|1846000_1847128_+|plate	baseplate J/gp47 family protein	plate	F6MIL6	Haemophilus_phage	32.0	1.2e-15
WP_003447441.1|1847135_1847789_+	DUF2313 domain-containing protein	NA	NA	NA	NA	NA
WP_003447445.1|1847790_1848771_+	hypothetical protein	NA	A0A2H4J9C3	uncultured_Caudovirales_phage	54.5	1.9e-22
WP_003447447.1|1848836_1850858_+	hypothetical protein	NA	I3PV04	Vibrio_phage	27.0	9.5e-24
WP_003447449.1|1850871_1851672_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003447451.1|1851811_1852321_+	glycoside hydrolase family 104 protein	NA	A0A1Y0T0U4	Pseudomonas_phage	61.0	3.9e-51
WP_158525119.1|1852350_1852812_+	DUF2514 family protein	NA	NA	NA	NA	NA
WP_083912811.1|1853262_1853472_+	CopG family transcriptional regulator	NA	NA	NA	NA	NA
WP_003447454.1|1853653_1853971_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003447455.1|1854071_1854761_-	SOS response-associated peptidase family protein	NA	A0A2H4J991	uncultured_Caudovirales_phage	50.7	3.4e-58
WP_003447456.1|1854912_1855341_+	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	36.3	3.4e-16
WP_037001973.1|1855913_1857683_+	RNA-directed DNA polymerase	NA	Q7M2A9	Enterobacteria_phage	34.0	5.4e-15
WP_191985179.1|1858369_1858687_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A2H4J1K3	uncultured_Caudovirales_phage	83.5	2.1e-39
1860165:1860180	attR	ATCAGGAAGAGCATCA	NA	NA	NA	NA
>prophage 3
NZ_CP017432	Pseudomonas sp. Lz4W chromosome, complete genome	5018820	3237291	3242175	5018820		uncultured_Caudovirales_phage(100.0%)	9	NA	NA
WP_003442061.1|3237291_3237963_+	Bax inhibitor-1/YccA family protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	95.1	1.9e-109
WP_003442060.1|3238073_3238466_+	sulfurtransferase complex subunit TusD	NA	A0A2H4JA39	uncultured_Caudovirales_phage	92.3	2.0e-63
WP_003442059.1|3238467_3238830_+	sulfurtransferase complex subunit TusC	NA	A0A2H4J8C0	uncultured_Caudovirales_phage	77.5	5.4e-47
WP_003442058.1|3238829_3239108_+	sulfurtransferase complex subunit TusB	NA	A0A2H4JG28	uncultured_Caudovirales_phage	72.7	3.4e-33
WP_003442057.1|3239104_3239440_+	TusE/DsrC/DsvC family sulfur relay protein	NA	A0A2H4J8B6	uncultured_Caudovirales_phage	86.5	1.1e-49
WP_003442054.1|3239436_3240438_+	glycosyl transferase family protein	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	91.3	7.9e-181
WP_003442052.1|3240526_3241525_+	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_003442050.1|3241596_3241824_+	YheU family protein	NA	A0A2H4J8A7	uncultured_Caudovirales_phage	98.7	2.1e-36
WP_003442048.1|3241842_3242175_-	YnfA family protein	NA	A0A2H4JF35	uncultured_Caudovirales_phage	91.8	1.9e-51
