assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000344335.2_ASM34433v2	NZ_CP018202	Pseudomonas syringae pv. actinidiae ICMP 9853, complete genome	1	1622395-1622559	1,1	CRT,PILER-CR	no		cas3,DEDDh,csa3,RT,PD-DExK,DinG	Orphan	CTGAGTTCGGATTCCGAACTC,ACTGAGTTCGGATTCCGAACTCAG	21,24	0	0	NA	NA	NA:NA	3,2	3	Orphan	cas3,DEDDh,csa3,RT,PD-DExK,DinG	NA|81aa|up_4|NZ_CP018202.1_1618911_1619154_-,NA|154aa|up_0|NZ_CP018202.1_1621442_1621904_+,NA|136aa|down_6|NZ_CP018202.1_1628889_1629297_-,NA|114aa|down_7|NZ_CP018202.1_1629298_1629640_-	NA|382aa|up_9|NZ_CP018202.1_1612005_1613151_-	TIGR03748, conj_PilL, conjugative transfer region protein, TIGR03748 family	NA|268aa|up_8|NZ_CP018202.1_1613608_1614412_-	TIGR01586, Cysteine_protease_avirulence_protein_AvrPphB, cysteine protease domain, YopT-type	NA|653aa|up_7|NZ_CP018202.1_1614694_1616653_-	cd17919, DEXHc_Snf, DEXH/Q-box helicase domain of DEAD-like helicase Snf family proteins	NA|359aa|up_6|NZ_CP018202.1_1616655_1617732_-	pfam14284, PcfJ, PcfJ-like protein	NA|67aa|up_5|NZ_CP018202.1_1618648_1618849_-	COG3130, Rmf, Ribosome modulation factor [Translation, ribosomal structure and biogenesis]	NA|81aa|up_4|NZ_CP018202.1_1618911_1619154_-	NA	NA|156aa|up_3|NZ_CP018202.1_1619356_1619824_-	PRK08182, PRK08182, single-stranded DNA-binding protein; Provisional	NA|195aa|up_2|NZ_CP018202.1_1619825_1620410_-	pfam11358, DUF3158, Protein of unknown function (DUF3158)	NA|260aa|up_1|NZ_CP018202.1_1620406_1621186_-	TIGR03761, ICE_PFL4669, integrating conjugative element protein, PFL_4669 family	NA|154aa|up_0|NZ_CP018202.1_1621442_1621904_+	NA	NA|246aa|down_0|NZ_CP018202.1_1623279_1624017_-	pfam11198, DUF2857, Protein of unknown function (DUF2857)	NA|434aa|down_1|NZ_CP018202.1_1624053_1625355_-	TIGR03764, ICE_PFGI_1_parB, integrating conjugative element, PFGI_1 class, ParB family protein	NA|252aa|down_2|NZ_CP018202.1_1625419_1626175_-	pfam01695, IstB_IS21, IstB-like ATP binding protein	NA|505aa|down_3|NZ_CP018202.1_1626195_1627710_-	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|188aa|down_4|NZ_CP018202.1_1627828_1628392_-	TIGR03764, ICE_PFGI_1_parB, integrating conjugative element, PFGI_1 class, ParB family protein	NA|88aa|down_5|NZ_CP018202.1_1628394_1628658_-	pfam03869, Arc, Arc-like DNA binding domain	NA|136aa|down_6|NZ_CP018202.1_1628889_1629297_-	NA	NA|114aa|down_7|NZ_CP018202.1_1629298_1629640_-	NA	NA|449aa|down_8|NZ_CP018202.1_1629636_1630983_-	TIGR00665, DnaB, replicative DNA helicase	NA|234aa|down_9|NZ_CP018202.1_1630982_1631684_-	pfam10979, DUF2786, Protein of unknown function (DUF2786)
GCF_000344335.2_ASM34433v2	NZ_CP018202	Pseudomonas syringae pv. actinidiae ICMP 9853, complete genome	2	3906795-3906958	1	CRISPRCasFinder	no		cas3,DEDDh,csa3,RT,PD-DExK,DinG	Orphan	TGCGACGCAGAGCGTCGAGAGCTGCATTCCACTGGAGCGTAGGGAACGATAATC	54	1	1	3906849-3906904	NZ_CP018202.1_4657824-4657879	NA	1	1	Orphan	cas3,DEDDh,csa3,RT,PD-DExK,DinG	NA|106aa|up_5|NZ_CP018202.1_3897670_3897988_+,NA|103aa|down_5|NZ_CP018202.1_3914122_3914431_-	NA|195aa|up_9|NZ_CP018202.1_3890236_3890821_+	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|494aa|up_8|NZ_CP018202.1_3891766_3893248_-	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed	NA|672aa|up_7|NZ_CP018202.1_3893867_3895883_-	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|399aa|up_6|NZ_CP018202.1_3896260_3897457_+	PRK09257, PRK09257, aromatic amino acid transaminase	NA|106aa|up_5|NZ_CP018202.1_3897670_3897988_+	NA	NA|477aa|up_4|NZ_CP018202.1_3898576_3900007_-	COG3666, COG3666, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|668aa|up_3|NZ_CP018202.1_3900037_3902041_-	cd01936, Ntn_CA, Cephalosporin acylase (CA) belongs to a family of beta-lactam acylases that includes penicillin G acylase (PGA) and aculeacin A acylase	NA|391aa|up_2|NZ_CP018202.1_3902233_3903406_+	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|658aa|up_1|NZ_CP018202.1_3903406_3905380_+	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|463aa|up_0|NZ_CP018202.1_3905387_3906776_+	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family	NA|545aa|down_0|NZ_CP018202.1_3906997_3908632_-	TIGR00868, Epithelial_chloride_channel_protein, calcium-activated chloride channel protein 1	NA|448aa|down_1|NZ_CP018202.1_3908812_3910156_+	pfam01244, Peptidase_M19, Membrane dipeptidase (Peptidase family M19)	NA|428aa|down_2|NZ_CP018202.1_3910198_3911482_+	COG0520, csdA, Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]	NA|287aa|down_3|NZ_CP018202.1_3911530_3912391_+	pfam03781, FGE-sulfatase, Sulfatase-modifying factor enzyme 1	NA|555aa|down_4|NZ_CP018202.1_3912456_3914121_+	TIGR01194, ATP-binding_protein_SyrD, cyclic peptide transporter	NA|103aa|down_5|NZ_CP018202.1_3914122_3914431_-	NA	NA|744aa|down_6|NZ_CP018202.1_3914429_3916661_+	COG4773, FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism]	NA|802aa|down_7|NZ_CP018202.1_3916903_3919309_+	COG4773, FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism]	NA|2873aa|down_8|NZ_CP018202.1_3919445_3928064_-	PRK12467, PRK12467, peptide synthase; Provisional	NA|2885aa|down_9|NZ_CP018202.1_3928065_3936720_-	PRK12316, PRK12316, peptide synthase; Provisional
GCF_000344335.2_ASM34433v2	NZ_CP018202	Pseudomonas syringae pv. actinidiae ICMP 9853, complete genome	3	4646973-4647074	2	CRISPRCasFinder	no		cas3,DEDDh,csa3,RT,PD-DExK,DinG	Orphan	GAACGGCATGCGACGCGGAGCGTCGGACGAT	31	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,RT,PD-DExK,DinG	NA,NA|60aa|down_0|NZ_CP018202.1_4647371_4647551_+,NA|146aa|down_7|NZ_CP018202.1_4656849_4657287_+	NA|443aa|up_9|NZ_CP018202.1_4637294_4638623_+	COG2133, COG2133, Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism]	NA|182aa|up_8|NZ_CP018202.1_4638788_4639334_-	COG0791, Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane]	NA|241aa|up_7|NZ_CP018202.1_4639425_4640148_-	pfam00877, NLPC_P60, NlpC/P60 family	NA|249aa|up_6|NZ_CP018202.1_4640223_4640970_-	PRK00481, PRK00481, NAD-dependent deacetylase; Provisional	NA|235aa|up_5|NZ_CP018202.1_4640981_4641686_-	PRK05642, PRK05642, DnaA regulatory inactivator Hda	NA|358aa|up_4|NZ_CP018202.1_4641914_4642988_-	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|367aa|up_3|NZ_CP018202.1_4643027_4644128_-	pfam09839, DUF2066, Uncharacterized protein conserved in bacteria (DUF2066)	NA|353aa|up_2|NZ_CP018202.1_4644458_4645517_+	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional	NA|217aa|up_1|NZ_CP018202.1_4645516_4646167_+	PRK05647, purN, phosphoribosylglycinamide formyltransferase; Reviewed	NA|238aa|up_0|NZ_CP018202.1_4646175_4646889_+	pfam11306, DUF3108, Protein of unknown function (DUF3108)	NA|60aa|down_0|NZ_CP018202.1_4647371_4647551_+	NA	NA|180aa|down_1|NZ_CP018202.1_4647650_4648190_-	pfam09831, DUF2058, Uncharacterized protein conserved in bacteria (DUF2058)	NA|278aa|down_2|NZ_CP018202.1_4648220_4649054_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|748aa|down_3|NZ_CP018202.1_4649081_4651325_-	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription]	NA|452aa|down_4|NZ_CP018202.1_4651481_4652837_-	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|301aa|down_5|NZ_CP018202.1_4652836_4653739_-	PRK11761, cysM, cysteine synthase CysM	NA|918aa|down_6|NZ_CP018202.1_4654011_4656765_+	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional	NA|146aa|down_7|NZ_CP018202.1_4656849_4657287_+	NA	NA|136aa|down_8|NZ_CP018202.1_4657283_4657691_+	pfam03724, META, META domain	NA|156aa|down_9|NZ_CP018202.1_4657947_4658415_-	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins
GCF_000344335.2_ASM34433v2	NZ_CP018202	Pseudomonas syringae pv. actinidiae ICMP 9853, complete genome	4	5452145-5452305	3	CRISPRCasFinder	no	RT,DEDDh	cas3,DEDDh,csa3,RT,PD-DExK,DinG	Unclear	TGGGAGCGAGCTTGCTCGCGAATGCAGACTGACTGATCAGTAGACTTTCGG	51	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,RT,PD-DExK,DinG	NA|74aa|up_1|NZ_CP018202.1_5450075_5450297_-,NA|330aa|down_8|NZ_CP018202.1_5461820_5462810_+	NA|456aa|up_9|NZ_CP018202.1_5442326_5443694_-	PRK11823, PRK11823, DNA repair protein RadA; Provisional	NA|149aa|up_8|NZ_CP018202.1_5443888_5444335_+	PRK00567, mscL, large-conductance mechanosensitive channel protein MscL	NA|259aa|up_7|NZ_CP018202.1_5444519_5445296_-	cd06195, FNR1, Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin	NA|78aa|up_6|NZ_CP018202.1_5445633_5445867_+	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|375aa|up_5|NZ_CP018202.1_5445996_5447121_+	COG2813, RsmC, 16S RNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis]	NA|56aa|up_4|NZ_CP018202.1_5447208_5447376_-	pfam10617, DUF2474, Protein of unknown function (DUF2474)	NA|336aa|up_3|NZ_CP018202.1_5447397_5448405_-	COG1294, AppB, Cytochrome bd-type quinol oxidase, subunit 2 [Energy production and conversion]	NA|480aa|up_2|NZ_CP018202.1_5448408_5449848_-	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I	NA|74aa|up_1|NZ_CP018202.1_5450075_5450297_-	NA	RT|428aa|up_0|NZ_CP018202.1_5450357_5451641_-	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	NA|734aa|down_0|NZ_CP018202.1_5452592_5454794_-	COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion]	NA|330aa|down_1|NZ_CP018202.1_5454790_5455780_-	COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion]	NA|177aa|down_2|NZ_CP018202.1_5455776_5456307_-	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion]	NA|432aa|down_3|NZ_CP018202.1_5456571_5457867_+	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and    metabolism]	NA|362aa|down_4|NZ_CP018202.1_5457863_5458949_+	PRK05031, PRK05031, tRNA (uracil-5-)-methyltransferase; Validated	NA|187aa|down_5|NZ_CP018202.1_5458717_5459278_-	pfam07551, DUF1534, Protein of unknown function (DUF1534)	NA|371aa|down_6|NZ_CP018202.1_5459676_5460789_+	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|297aa|down_7|NZ_CP018202.1_5460925_5461816_+	pfam04228, Zn_peptidase, Putative neutral zinc metallopeptidase	NA|330aa|down_8|NZ_CP018202.1_5461820_5462810_+	NA	NA|185aa|down_9|NZ_CP018202.1_5462987_5463542_-	COG0546, Gph, Predicted phosphatases [General function prediction only]
GCF_000344335.2_ASM34433v2	NZ_CP018204	Pseudomonas syringae pv. actinidiae ICMP 9853 plasmid p9853_B, complete sequence	1	29791-29881	1	CRISPRCasFinder	no			Orphan	GGGGTCCGGGGAGCAATGGAACAG	24	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,RT,PD-DExK,DinG	NA|99aa|up_8|NZ_CP018204.1_15912_16209_-,NA|677aa|up_7|NZ_CP018204.1_16753_18784_+,NA|385aa|up_5|NZ_CP018204.1_21857_23012_+,NA|118aa|up_1|NZ_CP018204.1_29004_29358_-,NA|61aa|up_0|NZ_CP018204.1_29427_29610_-,NA	NA|207aa|up_9|NZ_CP018204.1_15273_15894_+	cd03767, SR_Res_par, Serine recombinase (SR) family, Partitioning (par)-Resolvase subfamily, catalytic domain; Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme	NA|99aa|up_8|NZ_CP018204.1_15912_16209_-	NA	NA|677aa|up_7|NZ_CP018204.1_16753_18784_+	NA	NA|527aa|up_6|NZ_CP018204.1_20130_21710_-	pfam00665, rve, Integrase core domain	NA|385aa|up_5|NZ_CP018204.1_21857_23012_+	NA	NA|182aa|up_4|NZ_CP018204.1_23061_23607_-	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|527aa|up_3|NZ_CP018204.1_26068_27648_+	pfam00665, rve, Integrase core domain	NA|327aa|up_2|NZ_CP018204.1_27867_28848_+	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair]	NA|118aa|up_1|NZ_CP018204.1_29004_29358_-	NA	NA|61aa|up_0|NZ_CP018204.1_29427_29610_-	NA	NA|216aa|down_0|NZ_CP018204.1_30687_31335_-	pfam14891, Peptidase_M91, Effector protein	NA|192aa|down_1|NZ_CP018204.1_32344_32920_+	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
