The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_020244	Bacillus subtilis XF-1, complete sequence	4061186	628055	673354	4061186	holin,integrase,terminase,tRNA,capsid,portal,protease,tail	uncultured_Caudovirales_phage(33.33%)	69	638444:638462	676797:676815
WP_015382920.1|628055_628532_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_015382921.1|628512_629202_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	tRNA	NA	NA	NA	NA
WP_015252683.1|629211_629667_+	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA	NA
WP_015382922.1|629659_630700_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	43.9	5.2e-66
WP_015382923.1|630930_632859_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	29.9	3.6e-57
WP_003243499.1|632984_633497_+	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
WP_003234073.1|633493_634141_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA	NA
WP_003234072.1|634162_634336_+	sec-independent protein translocase protein TatAY	NA	NA	NA	NA	NA
WP_072174264.1|634342_635107_+	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	30.8	1.5e-22
WP_003225680.1|635338_635530_-	YdiK family protein	NA	NA	NA	NA	NA
WP_015382925.1|635526_636261_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_003155970.1|636499_636784_+	co-chaperone GroES	NA	A0A221S3C8	uncultured_virus	51.6	2.2e-19
WP_015382926.1|636830_638462_+	chaperonin GroEL	NA	A0A219YK78	uncultured_virus	57.9	1.6e-159
638444:638462	attL	TATGGGCGGCATGATGTAA	NA	NA	NA	NA
WP_041517677.1|638551_639751_-|integrase	tyrosine-type recombinase/integrase	integrase	S6C485	Thermus_phage	46.3	3.1e-83
WP_015382927.1|639767_640274_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4JA43	uncultured_Caudovirales_phage	69.3	5.8e-63
WP_041517679.1|640342_640705_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041517681.1|641049_641439_-	helix-turn-helix transcriptional regulator	NA	A0A2H4J6F9	uncultured_Caudovirales_phage	52.1	9.0e-24
WP_041517683.1|641616_641841_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_041517685.1|641853_642168_+	hypothetical protein	NA	A0A2H4JDL0	uncultured_Caudovirales_phage	44.2	2.1e-10
WP_015382930.1|642164_642890_+	phage regulatory protein/antirepressor Ant	NA	A0A2H4J4N4	uncultured_Caudovirales_phage	63.3	8.5e-84
WP_015382931.1|642946_643516_+	helix-turn-helix transcriptional regulator	NA	A0A2H4J884	uncultured_Caudovirales_phage	59.0	3.4e-64
WP_015382932.1|643512_643770_+	hypothetical protein	NA	A0A2H4J4M9	uncultured_Caudovirales_phage	41.0	6.4e-10
WP_015382933.1|643899_644100_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041517687.1|644201_644390_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015382934.1|644389_645340_+	YqaJ viral recombinase family protein	NA	A0A2H4JA52	uncultured_Caudovirales_phage	71.4	1.7e-132
WP_015382935.1|645342_646185_+	recombinase RecT	NA	A0A2H4JCY8	uncultured_Caudovirales_phage	85.8	1.2e-129
WP_041517689.1|646351_647044_+	DnaD domain protein	NA	A0A1L2JY26	Aeribacillus_phage	39.8	6.2e-07
WP_041517691.1|646964_647756_+	ATP-binding protein	NA	A6XMI1	Bacillus_virus	50.0	3.4e-62
WP_015382938.1|647748_647892_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041517693.1|647985_648408_+	hypothetical protein	NA	A0A0A7RWK2	Clostridium_phage	38.7	4.6e-13
WP_015382939.1|648394_648853_+	DUF1064 domain-containing protein	NA	A0A2H4J891	uncultured_Caudovirales_phage	80.7	7.1e-60
WP_187290713.1|648972_649140_+	hypothetical protein	NA	A0A2H4J4N7	uncultured_Caudovirales_phage	65.9	1.4e-10
WP_041517697.1|649220_649427_+	XtrA/YqaO family protein	NA	A0A2H4J4M6	uncultured_Caudovirales_phage	66.7	8.7e-18
WP_080030639.1|649458_649851_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015382940.1|649847_650105_+	hypothetical protein	NA	A0A2H4JA61	uncultured_Caudovirales_phage	40.5	7.3e-06
WP_015382941.1|650108_650933_+	DNA adenine methylase	NA	Q8W5X3	Listeria_phage	48.0	1.5e-63
WP_041517699.1|651042_651261_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041517701.1|651257_651671_+	hypothetical protein	NA	A0A1P8CWX0	Bacillus_phage	38.5	1.1e-16
WP_041517703.1|651667_652030_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041517705.1|652026_652209_+	hypothetical protein	NA	Q38080	Bacillus_phage	91.7	2.0e-13
WP_015715374.1|652205_652376_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033884289.1|652511_652643_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015382943.1|652658_652844_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015382944.1|652864_653326_+	hypothetical protein	NA	A0A2H4J4R7	uncultured_Caudovirales_phage	46.0	5.3e-23
WP_017697402.1|653449_653791_+	hypothetical protein	NA	Q38579	Bacillus_phage	61.9	6.7e-31
WP_015382946.1|653954_654686_+	DNA-binding protein	NA	A0A2P1JTW4	Anoxybacillus_phage	55.8	1.6e-61
WP_041517708.1|654666_655968_+|terminase	PBSX family phage terminase large subunit	terminase	B5LPR0	Bacillus_virus	78.6	2.4e-206
WP_015382948.1|655980_657510_+|portal	phage portal protein	portal	A0A1B1P863	Bacillus_phage	63.5	2.1e-164
WP_041517710.1|657506_658613_+|capsid	phage minor capsid protein	capsid	B5LPR2	Bacillus_virus	45.2	6.2e-86
WP_144052034.1|658691_659324_+	hypothetical protein	NA	M9Q248	Clostridium_phage	28.0	1.4e-05
WP_015382951.1|659323_660208_+	hypothetical protein	NA	A0A1S5SA37	Streptococcus_phage	62.6	7.9e-100
WP_041517712.1|660170_660479_+	fibronectin type III domain-containing protein	NA	Q0PDK9	Bacillus_phage	56.2	1.8e-14
WP_041517714.1|660534_660936_+	hypothetical protein	NA	A0A1B1P889	Bacillus_phage	38.6	2.1e-15
WP_041517716.1|660928_661264_+	phage protein Gp9	NA	I1TLE5	Bacillus_phage	37.9	1.1e-09
WP_041517718.1|661263_661614_+	hypothetical protein	NA	B5LPR8	Bacillus_virus	50.0	3.2e-20
WP_015382953.1|661618_662029_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041517720.1|662028_662475_+	hypothetical protein	NA	A0A2I7QIP9	Bacillus_phage	45.0	7.2e-25
WP_080030641.1|662461_662737_+	fibronectin type III domain-containing protein	NA	Q0PDK9	Bacillus_phage	50.0	2.1e-14
WP_015382956.1|662780_663164_+|tail	phage tail assembly chaperone	tail	NA	NA	NA	NA
WP_015382957.1|663173_663836_+	hypothetical protein	NA	B5LPS2	Bacillus_virus	34.3	1.5e-23
WP_041517722.1|663813_666690_+|tail	phage tail tape measure protein	tail	A0A0S2SXL7	Bacillus_phage	55.1	2.5e-86
WP_015382959.1|666686_667412_+|tail	phage tail family protein	tail	A0A1B1P894	Bacillus_phage	37.1	3.3e-27
WP_015382960.1|667425_670710_+|tail	phage tail protein	tail	Q5YA57	Bacillus_phage	43.0	2.7e-113
WP_041517725.1|670721_671105_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144052035.1|671249_671420_+	XkdX family protein	NA	NA	NA	NA	NA
WP_041517727.1|671430_671688_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015382961.1|671765_672044_+	hemolysin XhlA family protein	NA	A0A2H4JD40	uncultured_Caudovirales_phage	69.6	2.8e-27
WP_015382962.1|672059_672323_+|holin	phage holin	holin	A0A2H4J6M0	uncultured_Caudovirales_phage	69.0	1.9e-25
WP_015382963.1|672376_673354_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A218KC88	Bacillus_phage	72.6	9.8e-67
676797:676815	attR	TATGGGCGGCATGATGTAA	NA	NA	NA	NA
>prophage 2
NC_020244	Bacillus subtilis XF-1, complete sequence	4061186	716016	724382	4061186		Synechococcus_phage(50.0%)	8	NA	NA
WP_014476028.1|716016_717312_+	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	25.4	1.7e-18
WP_015382996.1|717385_718111_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3G7P8	Synechococcus_phage	44.1	7.0e-46
WP_003219409.1|718103_718358_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_014663062.1|718354_719038_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_015382997.1|719021_721250_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	40.1	1.9e-158
WP_003233947.1|721225_722656_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.5	1.2e-52
WP_015382998.1|722757_723798_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3HVS1	Synechococcus_phage	43.4	8.2e-64
WP_015382999.1|723794_724382_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.4	7.0e-28
>prophage 3
NC_020244	Bacillus subtilis XF-1, complete sequence	4061186	1211817	1255164	4061186	tRNA,protease,coat	Planktothrix_phage(25.0%)	47	NA	NA
WP_015383342.1|1211817_1212054_-|coat	spore coat protein YjzB	coat	NA	NA	NA	NA
WP_041517801.1|1212218_1213157_+	beta-ketoacyl-ACP synthase III	NA	NA	NA	NA	NA
WP_003244890.1|1213179_1214421_+	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA	NA
WP_015383343.1|1214496_1215282_+	DUF2268 domain-containing protein	NA	NA	NA	NA	NA
WP_015383344.1|1215474_1216461_+	oligopeptide ABC transporter ATP-binding protein AppD	NA	G9BWD6	Planktothrix_phage	32.9	5.7e-22
WP_015383345.1|1216457_1217447_+	oligopeptide ABC transporter ATP-binding protein AppF	NA	F2Y302	Organic_Lake_phycodnavirus	26.1	6.7e-07
WP_015383346.1|1217534_1219163_+	oligopeptide-binding protein	NA	NA	NA	NA	NA
WP_041056500.1|1219241_1220192_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_015383348.1|1220207_1221122_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003239298.1|1221327_1222080_+	YjbA family protein	NA	A0A0A0RP53	Bacillus_phage	43.9	5.4e-49
WP_015483084.1|1222114_1223107_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_015252360.1|1223850_1225488_+	oligopeptide ABC transporter substrate-binding protein OppA	NA	NA	NA	NA	NA
WP_003245554.1|1225595_1226531_+	oligopeptide ABC transporter permease OppB	NA	NA	NA	NA	NA
WP_003232954.1|1226534_1227452_+	oligopeptide ABC transporter permease OppC	NA	NA	NA	NA	NA
WP_080030655.1|1227456_1228533_+	oligopeptide ABC transporter ATP-binding protein OppD	NA	G9BWD6	Planktothrix_phage	30.8	2.1e-17
WP_003245567.1|1228534_1229452_+	oligopeptide ABC transporter ATP-binding protein OppF	NA	M1HP82	Acanthocystis_turfacea_Chlorella_virus	24.6	1.2e-05
WP_080030656.1|1229557_1230775_+	MFS transporter	NA	NA	NA	NA	NA
WP_015383352.1|1230938_1231514_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_014476435.1|1231694_1232090_+	transcriptional regulator Spx	NA	NA	NA	NA	NA
WP_015383353.1|1232132_1232789_-	TerC family protein	NA	W8EBD0	Pseudomonas_phage	39.5	1.9e-29
WP_119122854.1|1232958_1233099_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015383354.1|1233065_1233722_+	adaptor protein MecA	NA	NA	NA	NA	NA
WP_015483087.1|1233885_1235037_+	competence protein CoiA	NA	NA	NA	NA	NA
WP_003245178.1|1235266_1237096_+	oligoendopeptidase F	NA	NA	NA	NA	NA
WP_003244944.1|1237133_1237301_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003245184.1|1237615_1238515_-|protease	protease adaptor protein SpxH	protease	NA	NA	NA	NA
WP_015383357.1|1238511_1238910_-	thiol management oxidoreductase component	NA	NA	NA	NA	NA
WP_080030721.1|1239164_1239710_-	bifunctional muramidase/murein lytic transglycosylase	NA	A0A1P8CWQ1	Bacillus_phage	60.4	8.2e-39
WP_015383359.1|1239904_1240477_-	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_003232922.1|1240601_1240970_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041517806.1|1240998_1241634_+	GTP diphosphokinase	NA	NA	NA	NA	NA
WP_003232918.1|1241652_1242453_+	NAD kinase	NA	NA	NA	NA	NA
WP_015383360.1|1242467_1243367_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_015383361.1|1243379_1244114_-	bis(5'-nucleosyl)-tetraphosphatase PrpE	NA	A8E2N0	Enterococcus_phage	25.2	2.5e-06
WP_015383362.1|1244346_1246191_+	monovalent cation:proton antiporter family protein	NA	NA	NA	NA	NA
WP_015383363.1|1246439_1247150_+	thiaminase II	NA	NA	NA	NA	NA
WP_015383364.1|1247124_1247742_+	thiazole tautomerase TenI	NA	NA	NA	NA	NA
WP_015383365.1|1247725_1248835_+	glycine oxidase ThiO	NA	NA	NA	NA	NA
WP_072173897.1|1248834_1249035_+	sulfur carrier protein ThiS	NA	NA	NA	NA	NA
WP_080030657.1|1249031_1249802_+	thiazole synthase	NA	NA	NA	NA	NA
WP_015383367.1|1249798_1250809_+	thiazole biosynthesis adenylyltransferase ThiF	NA	NA	NA	NA	NA
WP_014479462.1|1250827_1251643_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
WP_015483090.1|1251778_1252555_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_015383369.1|1252655_1253339_+|coat	spore coat protein CotO	coat	NA	NA	NA	NA
WP_003239244.1|1253432_1253882_-|coat	spore coat protein CotZ	coat	NA	NA	NA	NA
WP_003239243.1|1254009_1254498_-|coat	spore coat protein CotY	coat	NA	NA	NA	NA
WP_014476454.1|1254648_1255164_-|coat	spore coat protein	coat	NA	NA	NA	NA
>prophage 4
NC_020244	Bacillus subtilis XF-1, complete sequence	4061186	1317582	1351340	4061186	holin,terminase,portal,plate,tail	Bacillus_phage(30.3%)	46	NA	NA
WP_015383418.1|1317582_1318854_+	ATPase YjoB	NA	A0A1V0SEI6	Indivirus	37.1	8.6e-15
WP_080030661.1|1318998_1320135_+	response regulator aspartate phosphatase RapA	NA	A0A1P8CWN8	Bacillus_phage	47.1	8.3e-94
WP_003245487.1|1320124_1320259_+	phosphatase RapA inhibitor PhrA	NA	NA	NA	NA	NA
WP_003232731.1|1320288_1320546_-	YciI family protein	NA	NA	NA	NA	NA
WP_015483118.1|1320665_1321619_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A218KC88	Bacillus_phage	74.1	7.3e-67
WP_015483119.1|1321658_1322036_-	PH domain-containing protein	NA	A5GYQ0	Lactococcus_phage	41.3	3.0e-16
WP_015383421.1|1322140_1322743_+	poly-gamma-glutamate hydrolase family protein	NA	F8WQ53	Bacillus_phage	49.2	1.1e-44
WP_003245071.1|1322819_1323656_+	manganese catalase family protein	NA	NA	NA	NA	NA
WP_041517820.1|1323699_1324296_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4JA43	uncultured_Caudovirales_phage	51.0	4.0e-39
WP_003232719.1|1324457_1324799_-	helix-turn-helix transcriptional regulator	NA	A0A2H4J6F9	uncultured_Caudovirales_phage	45.8	1.3e-18
WP_015383422.1|1324977_1325157_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015383423.1|1325143_1325974_+	hypothetical protein	NA	S6BFM4	Thermus_phage	46.4	5.1e-24
WP_080030662.1|1325879_1326680_+	ATP-binding protein	NA	A6XMI1	Bacillus_virus	51.7	8.6e-61
WP_015383425.1|1326679_1326847_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015383426.1|1326931_1327282_+	phage-like element PBSX protein XkdD	NA	NA	NA	NA	NA
WP_014476537.1|1327278_1327485_+	phage-like element PBSX protein XtrA	NA	A0A2H4J4M6	uncultured_Caudovirales_phage	50.0	2.1e-11
WP_015483123.1|1327600_1328110_+	sigma-70 family RNA polymerase sigma factor	NA	A0A1L2JY33	Aeribacillus_phage	39.2	5.0e-22
WP_015383428.1|1328227_1329025_+|terminase	phage terminase small subunit	terminase	A0A0S2MVB6	Bacillus_phage	50.2	3.6e-59
WP_015483124.1|1329021_1330323_+|terminase	PBSX family phage terminase large subunit	terminase	A0A2P1JTW5	Anoxybacillus_phage	60.2	1.8e-153
WP_015383429.1|1330326_1331814_+|portal	phage portal protein	portal	A0A1B1P7C8	Bacillus_phage	55.5	2.9e-139
WP_015383430.1|1331833_1332661_+	hypothetical protein	NA	A0A1B1P7E4	Bacillus_phage	58.7	4.7e-54
WP_003232690.1|1332686_1333622_+	phage-like element PBSX protein XkdG	NA	A0A1B1P7E3	Bacillus_phage	63.8	1.1e-104
WP_015383431.1|1333643_1334027_+	DUF3199 family protein	NA	A0A1B1P7D6	Bacillus_phage	40.2	1.4e-13
WP_015383432.1|1334023_1334380_+	YqbH/XkdH family protein	NA	NA	NA	NA	NA
WP_015383433.1|1334376_1334862_+	HK97 gp10 family phage protein	NA	A0A249XXA4	Clostridium_phage	47.0	2.1e-38
WP_015383434.1|1334874_1335315_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015383435.1|1335318_1335534_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015383436.1|1335530_1336931_+|tail	phage tail sheath family protein	tail	A0A0A7S087	Clostridium_phage	39.3	2.3e-77
WP_003232677.1|1336932_1337376_+|tail	phage tail tube protein	tail	A0A0K2CNG3	Brevibacillus_phage	45.2	8.4e-26
WP_003232676.1|1337468_1337915_+	phage-like element PBSX protein XkdN	NA	A0A249XXA9	Clostridium_phage	33.6	7.5e-14
WP_003239113.1|1337944_1338094_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080030663.1|1338095_1342097_+	transglycosylase SLT domain-containing protein	NA	A0A1L2JY60	Aeribacillus_phage	44.5	6.9e-42
WP_015383438.1|1342089_1342749_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A090DBR9	Clostridium_phage	34.6	5.6e-26
WP_015483129.1|1342764_1343742_+	hypothetical protein	NA	H7BV96	unidentified_phage	32.6	2.3e-39
WP_015383440.1|1343741_1344008_+	DUF2577 family protein	NA	S6C459	Thermus_phage	35.2	8.4e-05
WP_015483130.1|1344066_1344492_+	DUF2634 domain-containing protein	NA	A0A2H4J6K5	uncultured_Caudovirales_phage	38.0	5.1e-12
WP_015383442.1|1344484_1345531_+|plate	baseplate J/gp47 family protein	plate	S6AVU3	Thermus_phage	43.8	4.8e-72
WP_015483131.1|1345514_1346093_+	YmfQ family protein	NA	A0A2H4J717	uncultured_Caudovirales_phage	33.1	5.1e-15
WP_015383444.1|1346089_1346362_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015383445.1|1346364_1348446_+	hypothetical protein	NA	A0A1P8CWR7	Bacillus_phage	38.8	2.6e-24
WP_015483132.1|1348459_1348789_+	XkdW family protein	NA	NA	NA	NA	NA
WP_014479563.1|1348785_1348950_+	XkdX family protein	NA	A0A2H4JAA1	uncultured_Caudovirales_phage	67.9	1.9e-15
WP_015383447.1|1348996_1349836_+	phage-like element PBSX protein XepA	NA	NA	NA	NA	NA
WP_015252265.1|1349888_1350158_+	hemolysin XhlA family protein	NA	A0A2H4JD40	uncultured_Caudovirales_phage	64.8	4.8e-24
WP_015483133.1|1350170_1350434_+|holin	phage holin	holin	A0A2H4J6M0	uncultured_Caudovirales_phage	64.4	1.4e-23
WP_015483134.1|1350446_1351340_+	N-acetylmuramoyl-L-alanine amidase	NA	Q9ZXD7	Bacillus_phage	69.7	1.8e-83
>prophage 5
NC_020244	Bacillus subtilis XF-1, complete sequence	4061186	1867852	1874421	4061186		Bacillus_phage(50.0%)	6	NA	NA
WP_003231758.1|1867852_1868245_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	G3MBF1	Bacillus_virus	58.3	2.5e-29
WP_014476877.1|1868204_1870307_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	U5PY35	Bacillus_phage	86.7	0.0e+00
WP_003231754.1|1870324_1871314_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	F8WQ21	Bacillus_phage	83.5	1.9e-155
WP_015383725.1|1871363_1871984_+	enzyme involved in deoxyribonucleotide synthesis	NA	A0A127AYS1	Bacillus_phage	48.4	1.2e-46
WP_015383726.1|1872047_1872815_-	sporulation-specific N-acetylmuramoyl-L-alanine amidase	NA	E5DV68	Deep-sea_thermophilic_phage	50.5	3.1e-52
WP_003231746.1|1873452_1874421_+	stage V sporulation protein K	NA	G3MAX6	Bacillus_virus	40.5	5.2e-52
>prophage 6
NC_020244	Bacillus subtilis XF-1, complete sequence	4061186	2279460	2285556	4061186		Staphylococcus_phage(66.67%)	8	NA	NA
WP_003223904.1|2279460_2280054_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	35.4	2.0e-14
WP_015483396.1|2280043_2280799_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	29.2	2.5e-09
WP_015384004.1|2281079_2281604_+	DUF309 domain-containing protein	NA	NA	NA	NA	NA
WP_003223910.1|2281617_2281992_-	GNAT family N-acetyltransferase RibT	NA	NA	NA	NA	NA
WP_003223915.1|2282104_2282569_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	60.0	5.5e-44
WP_014480160.1|2282601_2283798_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	54.9	4.1e-115
WP_041517918.1|2283812_2284460_-	riboflavin synthase subunit alpha	NA	A0A2H4PQS5	Staphylococcus_phage	46.4	5.0e-43
WP_015384006.1|2284470_2285556_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	36.1	5.1e-56
>prophage 7
NC_020244	Bacillus subtilis XF-1, complete sequence	4061186	2644202	2697669	4061186	tRNA,protease,coat	uncultured_Mediterranean_phage(14.29%)	56	NA	NA
WP_003229725.1|2644202_2645348_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.0	3.4e-87
WP_015384251.1|2645374_2646403_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_015384252.1|2646432_2646633_-	DUF2905 domain-containing protein	NA	NA	NA	NA	NA
WP_015384253.1|2646625_2647630_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	30.8	1.1e-07
WP_003229717.1|2647640_2648246_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_003229715.1|2648384_2648897_-	sporulation cell-cell signaling protein BofC	NA	NA	NA	NA	NA
WP_015483512.1|2648944_2650252_-	MFS transporter	NA	NA	NA	NA	NA
WP_015483513.1|2650322_2651348_-	inositol 2-dehydrogenase	NA	NA	NA	NA	NA
WP_015483514.1|2651585_2652233_+	serine/threonine protein kinase	NA	A0A2R3ZQF2	Marseillevirus	26.3	5.4e-05
WP_003229707.1|2652278_2652401_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158324506.1|2652563_2652932_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015483515.1|2652938_2653079_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015384259.1|2653242_2654697_+	alanine:cation symporter family protein	NA	NA	NA	NA	NA
WP_041518247.1|2654737_2655460_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_003245996.1|2655562_2656159_-	spore germination protein SgpA	NA	NA	NA	NA	NA
WP_015384261.1|2656306_2657464_-|coat	spore coat assembly protein SafA	coat	NA	NA	NA	NA
WP_015384262.1|2657580_2658687_-	quinolinate synthase NadA	NA	NA	NA	NA	NA
WP_041517973.1|2658673_2659543_-	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA	NA
WP_015384263.1|2659496_2661092_-	L-aspartate oxidase	NA	NA	NA	NA	NA
WP_015483518.1|2661194_2662382_+	cysteine desulfurase NifS	NA	A0A141ZJV0	Faustovirus	27.4	2.3e-33
WP_015483519.1|2662341_2662884_+	transcription repressor NadR	NA	NA	NA	NA	NA
WP_041517975.1|2662906_2663764_-	prephenate dehydratase	NA	NA	NA	NA	NA
WP_003222630.1|2663780_2664224_-	transcriptional regulator ThrR	NA	NA	NA	NA	NA
WP_003229675.1|2664284_2665571_-	GTPase ObgE	NA	NA	NA	NA	NA
WP_015483521.1|2665604_2666186_-	sporulation initiation phosphotransferase Sop0B	NA	NA	NA	NA	NA
WP_003229671.1|2666263_2666386_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003222623.1|2666506_2666791_-	50S ribosomal protein L27	NA	NA	NA	NA	NA
WP_003229669.1|2666803_2667142_-|protease	ribosomal-processing cysteine protease Prp	protease	NA	NA	NA	NA
WP_003229668.1|2667144_2667453_-	50S ribosomal protein L21	NA	NA	NA	NA	NA
WP_015483522.1|2667599_2668466_-	stage IV sporulation protein SpoIVFB	NA	NA	NA	NA	NA
WP_004398684.1|2668458_2669253_-	stage IV sporulation protein SpoIVFA	NA	NA	NA	NA	NA
WP_004398624.1|2669401_2670208_-	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_004398901.1|2670209_2670890_-	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_004398811.1|2670942_2671461_-	rod shape-determining protein MreD	NA	NA	NA	NA	NA
WP_003222609.1|2671457_2672330_-	rod shape-determining protein MreC	NA	NA	NA	NA	NA
WP_003229650.1|2672360_2673374_-	rod shape-determining protein MreB	NA	NA	NA	NA	NA
WP_015384272.1|2673465_2674161_-	DNA repair protein RadC	NA	NA	NA	NA	NA
WP_004398496.1|2674197_2674767_-	septum formation protein Maf	NA	NA	NA	NA	NA
WP_015384273.1|2674919_2675918_-	stage II sporulation protein SpoIIB	NA	NA	NA	NA	NA
WP_015384274.1|2676051_2676798_-	prepilin peptidase	NA	NA	NA	NA	NA
WP_015384275.1|2676937_2678230_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_015483523.1|2678289_2680932_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0S951	Catovirus	42.3	5.4e-160
WP_003222590.1|2681379_2681571_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014480462.1|2681589_2682615_-|coat	spore coat protein CotN	coat	NA	NA	NA	NA
WP_015483524.1|2682647_2684375_-|coat	spore coat morphogenetic protein SpoVID	coat	NA	NA	NA	NA
WP_015384279.1|2684505_2685798_-	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA	NA
WP_015483525.1|2685827_2686802_-	porphobilinogen synthase	NA	NA	NA	NA	NA
WP_015483526.1|2686798_2687587_-	uroporphyrinogen-III synthase	NA	NA	NA	NA	NA
WP_080030685.1|2687576_2688521_-	hydroxymethylbilane synthase	NA	NA	NA	NA	NA
WP_003222575.1|2688553_2689384_-	cytochrome c biogenesis protein	NA	NA	NA	NA	NA
WP_004399038.1|2689391_2690759_-|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
WP_014477563.1|2690988_2691486_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003229621.1|2691507_2692095_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
WP_015384282.1|2692091_2694416_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	43.5	1.7e-181
WP_015384283.1|2694596_2696255_-|protease	ATP-dependent protease LonB	protease	NA	NA	NA	NA
WP_003229613.1|2696406_2697669_-|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	64.9	1.3e-148
>prophage 8
NC_020244	Bacillus subtilis XF-1, complete sequence	4061186	3274106	3281799	4061186	holin	Organic_Lake_phycodnavirus(50.0%)	9	NA	NA
WP_015384651.1|3274106_3274745_-|holin	choline ABC transporter permease OpuBD	holin	NA	NA	NA	NA
WP_015384652.1|3274761_3275682_-	osmoprotectant ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003228370.1|3275693_3276347_-|holin	choline ABC transporter permease OpuBB	holin	NA	NA	NA	NA
WP_014480909.1|3276363_3277509_-|holin	betaine/proline/choline family ABC transporter ATP-binding protein	holin	F2Y2R6	Organic_Lake_phycodnavirus	32.7	6.0e-15
WP_014478002.1|3277792_3278326_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_015483698.1|3278357_3279032_-|holin	glycine betaine/carnitine/choline/choline sulfate ABC transporter permease OpuCD	holin	NA	NA	NA	NA
WP_015384655.1|3279049_3279961_-	osmoprotectant ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003228349.1|3279980_3280634_-|holin	glycine betaine/carnitine/choline/choline sulfate ABC transporter permease OpuCB	holin	NA	NA	NA	NA
WP_015483699.1|3280656_3281799_-|holin	betaine/proline/choline family ABC transporter ATP-binding protein	holin	W6JKT0	Anomala_cuprea_entomopoxvirus	29.3	6.2e-12
>prophage 9
NC_020244	Bacillus subtilis XF-1, complete sequence	4061186	3672591	3696336	4061186	bacteriocin,tRNA,protease	Staphylococcus_phage(66.67%)	24	NA	NA
WP_015384925.1|3672591_3674262_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003243604.1|3674258_3674687_-	DUF1934 domain-containing protein	NA	NA	NA	NA	NA
WP_003222002.1|3674999_3675131_+|bacteriocin	subtilosin A family bacteriocin	bacteriocin	NA	NA	NA	NA
WP_010886632.1|3675087_3675240_+|bacteriocin	bacteriocin-like protein SboX	bacteriocin	NA	NA	NA	NA
WP_015483832.1|3675264_3676611_+	subtilosin maturase AlbA	NA	NA	NA	NA	NA
WP_003222006.1|3676623_3676785_+|bacteriocin	antilisterial bacteriocin subtilosin biosynthesis protein AlbB	bacteriocin	NA	NA	NA	NA
WP_015384927.1|3676781_3677501_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.2	4.3e-19
WP_041518103.1|3677493_3678804_+|bacteriocin	antilisterial bacteriocin subtilosin biosynthesis protein AlbD	bacteriocin	NA	NA	NA	NA
WP_080030755.1|3678793_3679954_+	insulinase family protein	NA	NA	NA	NA	NA
WP_015384930.1|3679958_3681239_+	insulinase family protein	NA	NA	NA	NA	NA
WP_015384931.1|3681235_3681937_+|bacteriocin	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	bacteriocin	NA	NA	NA	NA
WP_015483837.1|3681942_3683316_-	YncE family protein	NA	NA	NA	NA	NA
WP_015384933.1|3683355_3684711_-	YncE family protein	NA	NA	NA	NA	NA
WP_015384935.1|3684940_3686086_+	response regulator aspartate phosphatase RapF	NA	A0A1P8CWN8	Bacillus_phage	43.5	1.3e-78
WP_009968329.1|3686069_3686189_+	phosphatase RapF inhibitor PhrF	NA	NA	NA	NA	NA
WP_015384936.1|3686416_3686893_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015384937.1|3687050_3687839_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015384940.1|3689314_3689962_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	40.3	4.5e-28
WP_015483840.1|3689954_3690518_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003227545.1|3690809_3691682_-	agmatinase	NA	NA	NA	NA	NA
WP_003227543.1|3691742_3692573_-	spermidine synthase	NA	NA	NA	NA	NA
WP_015384942.1|3692775_3694851_+	penicillin-binding protein	NA	NA	NA	NA	NA
WP_003244446.1|3695144_3695663_-	YwhD family protein	NA	NA	NA	NA	NA
WP_003243167.1|3695676_3696336_-|protease	site-2 protease family protein	protease	NA	NA	NA	NA
>prophage 10
NC_020244	Bacillus subtilis XF-1, complete sequence	4061186	3730706	3775444	4061186	lysis,holin,protease,coat	Bacillus_phage(40.0%)	44	NA	NA
WP_015384970.1|3730706_3731828_-|coat	spore coat biosynthesis protein SpsE	coat	NA	NA	NA	NA
WP_015384971.1|3731827_3732697_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_015384972.1|3732697_3733867_-	DegT/DnrJ/EryC1/StrS aminotransferase family protein	NA	A0A1D8KU11	Synechococcus_phage	28.1	2.1e-15
WP_041518106.1|3733887_3735312_-	CDP-glycerol glycerophosphotransferase family protein	NA	NA	NA	NA	NA
WP_015384974.1|3735316_3736087_-|coat	spore coat dTDP-glycosyltransferase SpsA	coat	A0A0F7L2F7	uncultured_marine_virus	28.6	3.4e-06
WP_014481253.1|3736406_3736952_+|coat	spore coat protein GerQ	coat	NA	NA	NA	NA
WP_003227446.1|3736995_3737367_-	DUF423 domain-containing protein	NA	NA	NA	NA	NA
WP_015384975.1|3737428_3738751_-	solute carrier family 23 protein	NA	NA	NA	NA	NA
WP_015483860.1|3738770_3739088_-	YwdI family protein	NA	NA	NA	NA	NA
WP_015384977.1|3739253_3740624_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_015384978.1|3740648_3741326_-	uracil-DNA glycosylase	NA	A0A172DS90	Canid_alphaherpesvirus	45.7	1.8e-48
WP_015384979.1|3741339_3742146_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_014665830.1|3742337_3743153_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
WP_003243437.1|3743251_3743500_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015384980.1|3743593_3745033_-	sucrose-6-phosphate hydrolase	NA	S6ATV4	Bacillus_phage	26.5	2.7e-20
WP_015384981.1|3745029_3746415_-	PTS system sucrose transporter subunit IIBC	NA	NA	NA	NA	NA
WP_003227423.1|3747529_3748360_-	sac operon transcriptional antiterminator SacT	NA	NA	NA	NA	NA
WP_080030757.1|3748399_3748702_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015384985.1|3749231_3751652_+|protease	serine protease Vpr	protease	A0A217EQY2	Bacillus_phage	38.2	5.3e-21
WP_015384986.1|3751689_3752691_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_041518108.1|3752864_3753614_-	oxygen-insensitive NADPH nitroreductase	NA	NA	NA	NA	NA
WP_015384988.1|3753719_3754901_-	cell shape-determining peptidoglycan glycosyltransferase RodA	NA	NA	NA	NA	NA
WP_003227411.1|3755397_3755661_+	spore morphogenesis/germination protein YwcE	NA	NA	NA	NA	NA
WP_015384989.1|3755702_3756077_-	cytochrome aa3 quinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_015384990.1|3756078_3756693_-	cytochrome aa3 quinol oxidase subunit III	NA	NA	NA	NA	NA
WP_003227407.1|3756706_3758656_-	cytochrome aa3 quinol oxidase subunit I	NA	NA	NA	NA	NA
WP_010886637.1|3758683_3759649_-	cytochrome aa3 quinol oxidase subunit II	NA	NA	NA	NA	NA
WP_041518274.1|3760163_3760409_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_015483870.1|3760476_3762018_-	UDP-glucose--hexose-1-phosphate uridylyltransferase	NA	NA	NA	NA	NA
WP_015384993.1|3762021_3763194_-	galactokinase	NA	NA	NA	NA	NA
WP_003227398.1|3763274_3763658_-	GtrA family protein	NA	NA	NA	NA	NA
WP_015384994.1|3763675_3764347_-	transcriptional regulator SlrC	NA	NA	NA	NA	NA
WP_003243648.1|3764701_3764860_+	transcriptional regulator SlrA	NA	NA	NA	NA	NA
WP_003222190.1|3765302_3765611_+	DUF485 domain-containing protein	NA	NA	NA	NA	NA
WP_015384995.1|3765607_3767149_+	cation acetate symporter	NA	NA	NA	NA	NA
WP_014478353.1|3767161_3767782_-	DsbA family protein	NA	NA	NA	NA	NA
WP_015384996.1|3767871_3769122_-	deferrochelatase/peroxidase EfeB	NA	NA	NA	NA	NA
WP_015384997.1|3769140_3770298_-	iron uptake system lipoprotein EfeM	NA	NA	NA	NA	NA
WP_041518109.1|3770294_3771740_-	ferrous ion permease EfeU	NA	NA	NA	NA	NA
WP_041518110.1|3771896_3772565_-	thiamine phosphate synthase	NA	NA	NA	NA	NA
WP_015483873.1|3772561_3773380_-	hydroxyethylthiazole kinase	NA	NA	NA	NA	NA
WP_041518111.1|3773387_3774293_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_015385002.1|3774398_3774785_+|holin	CidA/LrgA family holin-like protein	holin	NA	NA	NA	NA
WP_003227371.1|3774766_3775444_+|lysis	CidB/LrgB family autolysis modulator	lysis	NA	NA	NA	NA
