assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000331695.1_ASM33169v1	NC_020125	Riemerella anatipestifer RA-CH-2, complete sequence	1	871223-872424	1,1,1,2	CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no	cas9,cas1,cas2	WYL,DEDDh,cas9,cas1,cas2,cas3,csa3,Csx28	Type II-C, Type II-B,Type II-A, or Type II-C?,Type II-B	GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC,TATCACAAAGATAGTNAAAATTGAAAGCAATTCACAAC,GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC,GTTGCGAATTATCACAAAGATAGTGAAAATTGAAAGCAATTCACAAC	47,38,47,47	0	0	NA	NA	NA:NA:NA:NA	15,15,11,11	15	TypeII-C,TypeII-B,TypeII-A,orTypeII-C?,TypeII-B	WYL,DEDDh,cas9,cas1,cas2,cas3,csa3,Csx28	NA,NA|468aa|down_0|NC_020125.1_872702_874106_-,NA|146aa|down_4|NC_020125.1_880136_880574_+	NA|325aa|up_9|NC_020125.1_859778_860753_-	pfam01916, DS, Deoxyhypusine synthase	NA|222aa|up_8|NC_020125.1_860904_861570_-	pfam06078, DUF937, Bacterial protein of unknown function (DUF937)	NA|167aa|up_7|NC_020125.1_861617_862118_-	pfam10652, DUF2480, Protein of unknown function (DUF2480)	NA|256aa|up_6|NC_020125.1_862147_862915_-	pfam11306, DUF3108, Protein of unknown function (DUF3108)	NA|351aa|up_5|NC_020125.1_863052_864105_+	COG0492, TrxB, Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]	NA|110aa|up_4|NC_020125.1_864110_864440_+	PTZ00490, PTZ00490, Ferredoxin superfamily; Provisional	NA|312aa|up_3|NC_020125.1_864485_865421_-	cd04730, NPD_like, 2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes oxidative denitrification of nitroalkanes to their corresponding carbonyl compounds and nitrites	cas9|1401aa|up_2|NC_020125.1_865672_869875_+	pfam18541, RuvC_III, RuvC endonuclease subdomain 3	cas1|300aa|up_1|NC_020125.1_869887_870787_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|113aa|up_0|NC_020125.1_870776_871115_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	NA|468aa|down_0|NC_020125.1_872702_874106_-	NA	NA|936aa|down_1|NC_020125.1_874131_876939_-	cd11308, Peptidase_M14NE-CP-C_like, Peptidase associated domain: C-terminal domain of M14 N/E carboxypeptidase; putative folding, regulation, or interaction domain	NA|398aa|down_2|NC_020125.1_877210_878404_+	cd10283, MnuA_DNase1-like, Mycoplasma pulmonis MnuA nuclease-like	NA|543aa|down_3|NC_020125.1_878508_880137_+	PLN02820, PLN02820, 3-methylcrotonyl-CoA carboxylase, beta chain	NA|146aa|down_4|NC_020125.1_880136_880574_+	NA	NA|603aa|down_5|NC_020125.1_880623_882432_+	pfam03772, Competence, Competence protein	NA|223aa|down_6|NC_020125.1_882556_883225_+	cd03498, SQR_TypeB_2_TM, Succinate:quinone oxidoreductase (SQR)-like Type B subfamily 2, transmembrane subunit; composed of proteins with similarity to the SQRs of Geobacter metallireducens and Corynebacterium glutamicum	NA|671aa|down_7|NC_020125.1_883289_885302_+	PRK07573, sdhA, fumarate reductase/succinate dehydrogenase flavoprotein subunit	NA|257aa|down_8|NC_020125.1_885325_886096_+	PRK07570, PRK07570, succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Validated	NA|361aa|down_9|NC_020125.1_886181_887264_+	PRK02406, PRK02406, DNA polymerase IV; Validated
GCF_000331695.1_ASM33169v1	NC_020125	Riemerella anatipestifer RA-CH-2, complete sequence	2	2162337-2163516	3,2,2	PILER-CR,CRISPRCasFinder,CRT	no	Csx28	WYL,DEDDh,cas9,cas1,cas2,cas3,csa3,Csx28	Type VI-B2	GTTGGGACTGCTCTCACTTTGAAGGGTATTCACAAC,GTTGGGACTGCTCTCACTTTGAAGGGTATTCACAAC,GTTGGGACTGCTCTCANTTTGAAGGGTATTCACAAC	36,36,36	0	0	NA	NA	VI-B2:VI-B2:VI-B2	12,15,12	15	TypeVI-B2	WYL,DEDDh,cas9,cas1,cas2,cas3,csa3,Csx28	Csx28|179aa|up_0|NC_020125.1_2161671_2162208_+,NA	NA|520aa|up_9|NC_020125.1_2147167_2148727_-	pfam10150, RNase_E_G, Ribonuclease E/G family	NA|126aa|up_8|NC_020125.1_2148950_2149328_-	cd13836, IHF_B, Beta subunit of integration host factor (IHFB)	NA|346aa|up_7|NC_020125.1_2149290_2150328_+	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair]	NA|188aa|up_6|NC_020125.1_2150372_2150936_+	TIGR03512, GldD_lipo, gliding motility-associated lipoprotein GldD	NA|307aa|up_5|NC_020125.1_2150961_2151882_+	cd01946, ribokinase_group_C, Ribokinase-like subgroup C	NA|456aa|up_4|NC_020125.1_2151977_2153345_+	pfam00639, Rotamase, PPIC-type PPIASE domain	NA|868aa|up_3|NC_020125.1_2153440_2156044_-	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed	NA|350aa|up_2|NC_020125.1_2156208_2157258_+	pfam02685, Glucokinase, Glucokinase	NA|293aa|up_1|NC_020125.1_2157884_2158763_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	Csx28|179aa|up_0|NC_020125.1_2161671_2162208_+	NA	NA|240aa|down_0|NC_020125.1_2164654_2165374_-	pfam14848, HU-DNA_bdg, DNA-binding domain	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
