The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP012347	Salmonella enterica subsp. enterica serovar Pullorum str. ATCC 9120 chromosome, complete genome	4694842	1656047	1665218	4694842	tRNA	Enterobacteria_phage(66.67%)	10	NA	NA
WP_000569175.1|1656047_1656995_+	ABC transporter ATP-binding protein	NA	F2Y1V5	Organic_Lake_phycodnavirus	27.8	1.6e-10
WP_000824854.1|1656978_1657710_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_001747411.1|1657690_1657798_-	protein YohO	NA	NA	NA	NA	NA
WP_001240413.1|1657857_1658589_-	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	87.9	1.3e-100
WP_000272844.1|1658811_1660497_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	90.9	2.4e-278
WP_000598636.1|1660493_1661213_+	two-component system response regulator BtsR	NA	NA	NA	NA	NA
WP_000950414.1|1661259_1661727_+	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	89.7	4.3e-73
WP_001197951.1|1661783_1662314_-	YehR family lipoprotein	NA	NA	NA	NA	NA
WP_000703145.1|1662485_1662944_-	YehR family lipoprotein	NA	Q9EYF5	Enterobacteria_phage	72.5	6.4e-53
WP_000195354.1|1663184_1665218_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	26.9	1.0e-54
>prophage 2
NZ_CP012347	Salmonella enterica subsp. enterica serovar Pullorum str. ATCC 9120 chromosome, complete genome	4694842	1732413	1742920	4694842		Enterobacteria_phage(37.5%)	10	NA	NA
WP_001144951.1|1732413_1733817_+	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	26.5	4.0e-21
WP_000981469.1|1733994_1734888_+	GalU regulator GalF	NA	A0A127AW70	Bacillus_phage	42.2	4.8e-44
WP_000697846.1|1735264_1736350_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.9	1.6e-102
WP_001023658.1|1736349_1737249_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.0	5.1e-30
WP_000857535.1|1737296_1738175_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	65.5	2.1e-108
WP_000973709.1|1738175_1738727_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	58.0	1.3e-52
WP_000018223.1|1738732_1739707_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
WP_000648783.1|1739722_1740496_+	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_000565913.1|1740500_1741580_+	CDP-glucose 4,6-dehydratase	NA	A0A222YY99	Synechococcus_phage	24.5	1.7e-16
WP_000126349.1|1741606_1742920_+	lipopolysaccharide biosynthesis protein RfbH	NA	H8ZJ36	Ostreococcus_tauri_virus	35.1	7.0e-52
>prophage 3
NZ_CP012347	Salmonella enterica subsp. enterica serovar Pullorum str. ATCC 9120 chromosome, complete genome	4694842	2553963	2644256	4694842	holin,integrase,tail,portal,lysis,protease,tRNA,terminase	Enterobacteria_phage(27.08%)	93	2620635:2620649	2646025:2646039
WP_001221017.1|2553963_2554659_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	tRNA	NA	NA	NA	NA
WP_000128810.1|2554716_2556627_-	ATP-dependent DNA helicase	NA	A0A127AW80	Bacillus_phage	32.4	8.5e-91
WP_000029550.1|2556757_2557102_+	RidA family protein	NA	NA	NA	NA	NA
WP_000457328.1|2557107_2557287_-	YoaH family protein	NA	NA	NA	NA	NA
WP_000978451.1|2557367_2558732_+	aminodeoxychorismate synthase component 1	NA	A0A0B5J984	Pandoravirus	34.5	3.6e-43
WP_000381544.1|2558735_2559314_+	CoA pyrophosphatase	NA	NA	NA	NA	NA
WP_000624273.1|2559577_2560942_+	L-serine ammonia-lyase	NA	NA	NA	NA	NA
WP_001192535.1|2561079_2562681_+	cyclic diguanylate phosphodiesterase	NA	NA	NA	NA	NA
WP_000421815.1|2562702_2564262_-	CNNM family cation transport protein YoaE	NA	A0A0R6PEZ3	Moraxella_phage	44.4	9.5e-40
WP_000150523.1|2564734_2565703_+	PTS mannose transporter subunit IIAB	NA	NA	NA	NA	NA
WP_000406920.1|2565755_2566556_+	PTS mannose transporter subunit IIC	NA	NA	NA	NA	NA
WP_001518647.1|2566568_2567420_+	PTS mannose transporter subunit IID	NA	NA	NA	NA	NA
WP_001518359.1|2568346_2568913_+	manganese efflux pump MntP	NA	NA	NA	NA	NA
WP_000010915.1|2568909_2569719_-	23S rRNA (guanine(745)-N(1))-methyltransferase	NA	NA	NA	NA	NA
WP_000730310.1|2569784_2571530_-	peptidoglycan glycosyltransferase FtsI	NA	NA	NA	NA	NA
WP_001062678.1|2571749_2571959_-	transcription antiterminator/RNA stability regulator CspE	NA	A0A1W6JNX5	Morganella_phage	78.1	1.6e-22
WP_001537930.1|2571971_2572115_-	YobF family protein	NA	NA	NA	NA	NA
WP_000714548.1|2573120_2573264_-	PhoP/PhoQ regulator MgrB	NA	NA	NA	NA	NA
WP_001236777.1|2573421_2573661_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001262195.1|2573872_2574664_-	DNA-binding transcriptional regulator KdgR	NA	NA	NA	NA	NA
WP_001747327.1|2574839_2576213_+	MFS transporter	NA	NA	NA	NA	NA
WP_000984498.1|2576260_2577142_-|protease	protease HtpX	protease	NA	NA	NA	NA
WP_001091237.1|2577334_2579383_-	carboxy terminal-processing peptidase	NA	A0A0R6PIZ1	Moraxella_phage	33.5	8.0e-87
WP_000431401.1|2579402_2580089_-	RNA chaperone ProQ	NA	NA	NA	NA	NA
WP_000145732.1|2580186_2580771_-	GAF domain-containing protein	NA	NA	NA	NA	NA
WP_001207294.1|2580812_2582096_+	membrane integrity lipid transport subunit YebS	NA	NA	NA	NA	NA
WP_014341101.1|2582064_2584698_+	PqiB family protein	NA	NA	NA	NA	NA
WP_023164993.1|2584775_2586215_+	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA	NA
WP_024131108.1|2586332_2586569_+	DUF1480 family protein	NA	NA	NA	NA	NA
WP_000457838.1|2586679_2586871_+	YebW family protein	NA	NA	NA	NA	NA
WP_000986172.1|2586889_2587540_-	protein-serine/threonine phosphatase	NA	A0A222YWF0	Escherichia_phage	50.9	5.5e-58
WP_001134856.1|2587763_2587928_-	membrane protein	NA	NA	NA	NA	NA
WP_000182072.1|2588213_2588936_-	SPI-1 type III secretion system guanine nucleotide exchange factor SopE2	NA	NA	NA	NA	NA
WP_000422882.1|2589619_2590015_+	DUF1398 domain-containing protein	NA	C6ZCX4	Enterobacteria_phage	32.8	9.2e-16
WP_000030934.1|2590344_2590821_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001025514.1|2591193_2591613_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_001576019.1|2591985_2592255_+	hypothetical protein	NA	B6SCX2	Bacteriophage	47.9	3.1e-07
WP_001576018.1|2592420_2592561_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001233445.1|2595698_2596613_+	DMT family transporter	NA	NA	NA	NA	NA
WP_000480735.1|2596745_2596904_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000848072.1|2596913_2597528_+	disulfide bond formation protein B	NA	NA	NA	NA	NA
WP_000457876.1|2598675_2598801_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001576015.1|2599370_2599571_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001687735.1|2599667_2600168_-|tail	tail fiber assembly protein	tail	A0A0M4RTP2	Salmonella_phage	77.4	1.5e-63
WP_000178848.1|2602693_2602936_-	hypothetical protein	NA	NA	NA	NA	NA
WP_072100756.1|2602974_2603838_-	DUF1983 domain-containing protein	NA	K7PKJ2	Enterobacteria_phage	78.9	9.0e-48
WP_143552158.1|2603833_2606194_-	host specificity protein J	NA	A0A0P0ZBW1	Stx2-converting_phage	67.4	0.0e+00
WP_001576012.1|2606397_2607102_-|tail	tail assembly protein	tail	A5LH42	Enterobacteria_phage	63.1	2.4e-67
WP_000606352.1|2607005_2607737_-|tail	phage tail protein	tail	A0A0P0ZE89	Stx2-converting_phage	75.6	1.0e-113
WP_001152416.1|2607746_2608442_-|tail	phage minor tail protein L	tail	A0A0K2FJ01	Enterobacteria_phage	66.7	1.0e-89
WP_000877926.1|2608531_2609065_+	superoxide dismutase [Cu-Zn]	NA	Q9MC02	Salmonella_phage	54.0	1.8e-46
WP_000725267.1|2609181_2609679_-	outer membrane beta-barrel protein	NA	A0A1B0VBR9	Salmonella_phage	36.6	1.4e-16
WP_000978295.1|2609777_2610110_-|tail	phage tail protein	tail	A5LH39	Enterobacteria_phage	61.5	2.6e-35
WP_077904894.1|2610106_2613094_-|tail	phage tail tape measure protein	tail	A0A291AWX1	Escherichia_phage	62.0	1.1e-265
WP_010989009.1|2613173_2613503_-|tail	phage tail assembly protein T	tail	A5LH37	Enterobacteria_phage	50.9	5.0e-23
WP_000478857.1|2613499_2613898_-|tail	phage minor tail protein G	tail	K7PLV8	Enterobacteria_phage	56.8	8.6e-30
WP_000132760.1|2613943_2614693_-|tail	phage tail protein	tail	A0A291AWU6	Escherichia_phage	68.2	3.1e-89
WP_000196704.1|2614704_2615106_-|tail	phage tail protein U	tail	K7PHM6	Enterobacterial_phage	59.4	3.8e-41
WP_000453192.1|2615102_2615669_-|tail	phage tail protein	tail	Q9G063	Phage_Gifsy-2	95.7	2.1e-13
WP_000774239.1|2615649_2615949_-	ATP-binding protein	NA	K7PH43	Enterobacteria_phage	45.1	4.5e-15
WP_001107908.1|2615941_2616265_-	DUF2190 family protein	NA	K7PLV6	Enterobacteria_phage	61.3	7.7e-29
WP_010989008.1|2616355_2618437_-|protease	Clp protease ClpP	protease	A0A291AWT6	Escherichia_phage	69.5	4.8e-265
WP_001009212.1|2618360_2619908_-|portal	phage portal protein	portal	A0A291AWU2	Escherichia_phage	63.6	1.3e-174
WP_000196190.1|2619904_2620111_-	hypothetical protein	NA	A0A1W6JT66	Pseudomonas_phage	53.3	2.9e-05
WP_000989241.1|2620107_2622246_-|terminase	phage terminase large subunit family protein	terminase	A5LH27	Enterobacteria_phage	72.6	3.4e-290
2620635:2620649	attL	AAACGCGCCCGGCAA	NA	NA	NA	NA
WP_000371784.1|2622202_2622736_-	DUF1441 family protein	NA	A0A291AWV8	Escherichia_phage	48.1	1.0e-33
WP_001541990.1|2622943_2623423_-|lysis	lysis protein	lysis	Q56118	Enterobacteria_phage	77.0	1.4e-55
WP_000984586.1|2623440_2623893_-	lysozyme	NA	A0A0M4R365	Salmonella_phage	97.3	2.3e-79
WP_001574216.1|2623876_2624206_-|holin	phage holin, lambda family	holin	A0A0M3ULK9	Salmonella_phage	100.0	5.8e-56
WP_001574215.1|2624481_2625168_+	PipA/GogA/GtgA family type III secretion system effector	NA	Q9MBM0	Phage_Gifsy-2	99.6	1.8e-131
WP_001574213.1|2626350_2626875_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001097218.1|2626971_2627661_-	antitermination protein	NA	I6PDF8	Cronobacter_phage	54.9	2.1e-60
WP_000784710.1|2627790_2628018_-	DNA breaking-rejoining protein	NA	A0A0M4RU10	Salmonella_phage	66.7	2.2e-14
WP_000940753.1|2628014_2628614_-	DUF1367 family protein	NA	A0A0U2RT94	Escherichia_phage	82.9	4.7e-96
WP_000972672.1|2628677_2628983_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001237395.1|2629614_2631594_-	MBL fold metallo-hydrolase	NA	A0A2P0VMX1	Tetraselmis_virus	46.3	1.9e-162
WP_000529511.1|2631990_2633121_+	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_000089416.1|2633407_2633803_-	DUF977 family protein	NA	A0A088CBK9	Shigella_phage	38.8	9.8e-18
WP_158000546.1|2633815_2634358_-	replication protein	NA	A0A0U2JGJ0	Escherichia_phage	75.5	4.1e-67
WP_000729536.1|2634269_2635268_-	DUF1376 domain-containing protein	NA	A0A0U2RT81	Escherichia_phage	67.3	4.1e-121
WP_001574210.1|2635314_2635809_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001033912.1|2635795_2636050_-	helix-turn-helix transcriptional regulator	NA	K7PKH4	Enterobacteria_phage	60.9	5.3e-17
WP_001574209.1|2636148_2636547_+	helix-turn-helix domain-containing protein	NA	K7PH19	Enterobacteria_phage	56.0	1.2e-18
WP_158001424.1|2636988_2637219_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000103933.1|2637553_2637829_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000682660.1|2637832_2638039_+	cell division inhibitor protein	NA	I6PBM9	Cronobacter_phage	45.6	3.0e-10
WP_000799627.1|2638114_2638450_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000023717.1|2638590_2641281_+	exodeoxyribonuclease VIII	NA	Q9QF34	Lambdoid_phage	72.8	4.0e-118
WP_053294625.1|2641273_2642104_+	recombination protein RecT	NA	A0A1P8DTF2	Proteus_phage	71.6	2.9e-104
WP_000280163.1|2642150_2642336_+	DUF1187 family protein	NA	NA	NA	NA	NA
WP_001574207.1|2642626_2642863_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001575998.1|2642923_2643202_+	excisionase	NA	A0A2H4J5E1	uncultured_Caudovirales_phage	37.5	1.4e-10
WP_000087636.1|2643176_2644256_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	52.5	3.0e-101
2646025:2646039	attR	TTGCCGGGCGCGTTT	NA	NA	NA	NA
>prophage 4
NZ_CP012347	Salmonella enterica subsp. enterica serovar Pullorum str. ATCC 9120 chromosome, complete genome	4694842	2947591	2954904	4694842	protease	Ralstonia_phage(16.67%)	7	NA	NA
WP_001746929.1|2947591_2947969_+	hypothetical protein	NA	A0A077KET4	Ralstonia_phage	41.0	1.2e-20
WP_001117984.1|2948130_2948328_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000934060.1|2948540_2950817_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.1	4.0e-164
WP_000520789.1|2950847_2951168_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	4.5e-13
WP_000447499.1|2951491_2951713_+	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.2	9.3e-18
WP_000125872.1|2951842_2953789_-	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	43.1	2.0e-39
WP_001201751.1|2953785_2954904_-	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	38.9	1.4e-08
>prophage 5
NZ_CP012347	Salmonella enterica subsp. enterica serovar Pullorum str. ATCC 9120 chromosome, complete genome	4694842	3627705	3693893	4694842	integrase,head,tail,plate,transposase,portal,lysis,capsid,tRNA,terminase	Salmonella_phage(82.22%)	64	3678375:3678390	3690842:3690857
WP_000469804.1|3627705_3628473_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_000043266.1|3628517_3629066_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_000256453.1|3629084_3629333_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_000460053.1|3629585_3630947_-	signal recognition particle protein	NA	NA	NA	NA	NA
WP_001537507.1|3631112_3631904_+	inner membrane protein YpjD	NA	NA	NA	NA	NA
WP_127172650.1|3631923_3633210_+	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_001287926.1|3633330_3633936_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001518875.1|3633970_3634561_-	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_001059151.1|3634684_3635563_+	NAD(+) kinase	NA	NA	NA	NA	NA
WP_000880964.1|3635648_3637310_+	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_001203445.1|3637458_3637797_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
WP_001112990.1|3637962_3638253_-	RnfH family protein	NA	NA	NA	NA	NA
WP_000242603.1|3638242_3638719_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_001518569.1|3638868_3639351_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	47.4	5.2e-29
WP_000533863.1|3651506_3652916_+	TolC family outer membrane protein	NA	NA	NA	NA	NA
WP_072200842.1|3655099_3656263_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_000391794.1|3656820_3657303_+	hypothetical protein	NA	Q19UP0	Mannheimia_phage	34.3	1.6e-17
WP_000980501.1|3657329_3657548_-	transcriptional regulator	NA	Q53ZE7	Salmonella_virus	77.8	7.5e-28
WP_001747387.1|3657616_3658717_-	phage late control D family protein	NA	A0A1S6KZZ5	Salmonella_phage	88.3	1.7e-176
WP_000980391.1|3658713_3659199_-|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	81.2	1.7e-67
WP_001747386.1|3659195_3662273_-|tail	phage tail tape measure protein	tail	E5G6Q1	Salmonella_phage	69.2	0.0e+00
WP_000763311.1|3662265_3662385_-|tail	GpE family phage tail protein	tail	E5G6Q0	Salmonella_phage	87.2	2.8e-13
WP_001281009.1|3662399_3662702_-|tail	phage tail assembly protein	tail	A0A1S6KZZ9	Salmonella_phage	89.0	5.3e-40
WP_001207656.1|3662756_3663272_-|tail	phage major tail tube protein	tail	A0A1S6L002	Salmonella_phage	95.9	5.6e-90
WP_000046140.1|3663281_3664454_-|tail	phage tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	90.5	2.7e-204
WP_000905027.1|3664596_3665163_-	recombinase family protein	NA	A0A0F7LA37	Escherichia_phage	86.3	1.1e-86
WP_072200837.1|3665190_3665589_+|tail	phage tail protein	tail	A0A0F7LBW5	Escherichia_phage	38.3	1.6e-12
WP_001747385.1|3665591_3666023_+|tail	tail fiber assembly protein	tail	A0A0F7LDZ0	Escherichia_phage	65.5	6.9e-49
WP_001747384.1|3666003_3666390_-|tail	tail fiber assembly protein	tail	A0A0M4S6V4	Salmonella_phage	58.3	2.5e-26
WP_001086836.1|3667885_3668491_-|tail	phage tail protein I	tail	A0A1S6L000	Salmonella_phage	92.5	1.5e-110
WP_000268280.1|3668483_3669392_-|plate	baseplate assembly protein	plate	A0A1S6KZY6	Salmonella_phage	90.4	7.8e-143
WP_000177590.1|3669378_3669738_-|plate	baseplate assembly protein	plate	A0A1S6KZZ4	Salmonella_phage	86.6	9.5e-52
WP_000993775.1|3669734_3670313_-|plate	phage baseplate assembly protein V	plate	A0A1S6KZX7	Salmonella_phage	87.0	4.2e-94
WP_000829141.1|3670381_3670828_-	phage virion morphogenesis protein	NA	A0A1S6L001	Salmonella_phage	84.9	1.5e-62
WP_001039935.1|3670820_3671252_-|tail	phage tail protein	tail	E5G6N3	Salmonella_phage	92.3	6.4e-71
WP_001337513.1|3671347_3671776_-|lysis	LysB family phage lysis regulatory protein	lysis	E5G6N2	Salmonella_phage	77.3	2.9e-47
WP_000727855.1|3671772_3672150_-	hypothetical protein	NA	A0A1S6KZZ2	Salmonella_phage	40.0	6.7e-16
WP_001069909.1|3672151_3672664_-	lysozyme	NA	E5G6N1	Salmonella_phage	92.3	3.1e-88
WP_000171568.1|3672644_3672860_-	hypothetical protein	NA	E5G6N0	Salmonella_phage	80.3	1.8e-26
WP_000868192.1|3672863_3673067_-|tail	tail protein X	tail	E5G6M9	Salmonella_phage	91.0	6.8e-31
WP_000673523.1|3673066_3673531_-|head	head completion/stabilization protein	head	A0A1S6KZW8	Salmonella_phage	89.6	6.4e-77
WP_000059191.1|3673626_3674277_-|terminase	terminase endonuclease subunit	terminase	E5G6M7	Salmonella_phage	96.3	8.7e-112
WP_001747382.1|3674280_3675339_-|capsid	phage major capsid protein, P2 family	capsid	E5G6M6	Salmonella_phage	93.4	3.8e-181
WP_001747381.1|3675355_3676189_-|capsid	GPO family capsid scaffolding protein	capsid	A0A1S6KZW9	Salmonella_phage	90.3	4.8e-123
WP_001098431.1|3676331_3678098_+|terminase	terminase ATPase subunit family protein	terminase	A0A1S6KZW3	Salmonella_phage	99.7	0.0e+00
WP_001747380.1|3678097_3679132_+|portal	phage portal protein	portal	A0A1S6KZW5	Salmonella_phage	89.5	2.6e-174
3678375:3678390	attL	TCAGCCAGCAGGCTTT	NA	NA	NA	NA
WP_001747379.1|3679187_3679826_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001747378.1|3679831_3680851_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
WP_001217575.1|3681207_3681441_-	DinI family protein	NA	E5G6M1	Salmonella_phage	100.0	4.7e-36
WP_001154434.1|3681451_3681640_-	hypothetical protein	NA	E5G6M0	Salmonella_phage	98.4	5.5e-27
WP_001747377.1|3681793_3684208_-	replication endonuclease	NA	E5G6L9	Salmonella_phage	97.8	0.0e+00
WP_001747376.1|3684204_3685062_-	DNA adenine methylase	NA	E5G6L8	Salmonella_phage	97.5	1.2e-161
WP_000752613.1|3685058_3685286_-	TraR/DksA family transcriptional regulator	NA	E5G6L7	Salmonella_phage	100.0	2.7e-36
WP_001747375.1|3685285_3685519_-	DUF2732 family protein	NA	E5G6L6	Salmonella_phage	93.5	1.3e-30
WP_001747374.1|3685586_3685928_-	DUF5347 domain-containing protein	NA	E5G6L5	Salmonella_phage	97.3	6.6e-55
WP_000956176.1|3686045_3686342_-	DUF2724 domain-containing protein	NA	E5G6L4	Salmonella_phage	90.4	4.9e-22
WP_000460856.1|3686349_3686859_-	phage regulatory CII family protein	NA	E5G6L3	Salmonella_phage	95.3	1.3e-83
WP_000102105.1|3686891_3687134_-	Rha family transcriptional regulator	NA	A0A1S6KZZ6	Salmonella_phage	97.5	6.8e-38
WP_001747373.1|3687250_3687883_+	phage repressor protein cI	NA	A0A1S6KZZ7	Salmonella_phage	59.5	3.7e-67
WP_001747372.1|3687886_3688909_+|integrase	site-specific integrase	integrase	A0A1S6L016	Salmonella_phage	92.4	8.9e-188
WP_001747371.1|3688916_3689963_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001142974.1|3690190_3690784_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000445376.1|3691182_3691986_+	DUF3800 domain-containing protein	NA	Q19UP3	Mannheimia_phage	44.7	1.2e-62
3690842:3690857	attR	AAAGCCTGCTGGCTGA	NA	NA	NA	NA
WP_102047853.1|3692781_3693893_-|transposase	IS3-like element IS1351 family transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	25.6	7.6e-07
>prophage 1
NZ_CP012348	Salmonella enterica subsp. enterica serovar Pullorum str. ATCC 9120 plasmid pCFSAN000725_01, complete sequence	86650	4407	45577	86650	integrase,transposase	Escherichia_phage(23.08%)	45	879:893	34328:34342
879:893	attL	GGCAGGAAGAAAATC	NA	NA	NA	NA
WP_001747300.1|4407_5088_-	DNA methylase	NA	A0A2I7RE86	Vibrio_phage	36.0	2.4e-27
WP_000369839.1|5469_5826_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000490265.1|5818_6289_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001746750.1|6799_7222_+	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	50.8	5.0e-28
WP_015059462.1|7221_8496_+	Y-family DNA polymerase	NA	F1C5A5	Cronobacter_phage	64.2	8.6e-156
WP_000064276.1|8577_9552_-	ParB/RepB/Spo0J family partition protein	NA	A0A1B0V750	Salmonella_phage	53.2	1.1e-83
WP_000427676.1|9551_10757_-	ParA family protein	NA	A0A077SL49	Escherichia_phage	69.3	1.5e-162
WP_000728917.1|11171_12113_+|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	Q2A0A7	Sodalis_phage	54.3	2.0e-72
WP_001541562.1|12144_12711_-	DUF2913 family protein	NA	NA	NA	NA	NA
WP_001527010.1|12767_13103_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001541564.1|13286_13703_-	hypothetical protein	NA	O64348	Escherichia_phage	42.9	8.2e-07
WP_015059463.1|13788_14904_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_001746759.1|15162_15651_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001541566.1|16305_17046_+	carbonic anhydrase	NA	NA	NA	NA	NA
WP_001240331.1|17252_17813_+	recombinase family protein	NA	A0A1W5LU24	Ralstonia_phage	42.7	1.3e-31
WP_000098783.1|17796_19461_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_001576625.1|19393_20419_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_001121399.1|20607_21645_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_001746579.1|22252_23146_+	virulence genes transcriptional activator SpvR	NA	NA	NA	NA	NA
WP_001576629.1|23319_23484_+	glycoside hydrolase family protein	NA	A0A0M4R365	Salmonella_phage	63.0	3.3e-12
WP_001541537.1|23657_24425_+	virulence protein SpvA	NA	NA	NA	NA	NA
WP_001746580.1|24606_26382_+	SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB	NA	NA	NA	NA	NA
WP_001746581.1|26662_27388_+	type III secretion system effector phosphothreonine lyase SpvC	NA	NA	NA	NA	NA
WP_001746582.1|27648_28299_+	SPI-2 type III secretion system effector cysteine hydrolase SpvD	NA	NA	NA	NA	NA
WP_001746584.1|28909_29260_+	helix-turn-helix domain-containing protein	NA	A0A077SLN2	Escherichia_phage	79.6	7.1e-44
WP_071785580.1|29326_29887_-	inverse autotransporter beta domain-containing protein	NA	NA	NA	NA	NA
WP_000905606.1|30606_31092_-	membrane protein	NA	NA	NA	NA	NA
WP_001576634.1|31085_31595_-	CaiF/GrlA family transcriptional regulator	NA	NA	NA	NA	NA
WP_000082169.1|32320_33103_-|integrase	phage integrase family protein	integrase	I3WFA4	Macacine_betaherpesvirus	91.1	1.6e-51
WP_000198608.1|33137_33659_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001266176.1|33655_33946_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000813641.1|34253_34472_-	type II toxin-antitoxin system antitoxin CcdA	NA	NA	NA	NA	NA
34328:34342	attR	GATTTTCTTCCTGCC	NA	NA	NA	NA
WP_001261283.1|35216_35447_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_001746752.1|35443_35872_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
WP_000175397.1|36441_37290_-	YjiK family protein	NA	NA	NA	NA	NA
WP_001816720.1|37315_37477_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000063791.1|37737_37950_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024138406.1|38022_38607_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001020576.1|39421_39697_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001746754.1|39683_40448_-	minor fimbrial protein	NA	NA	NA	NA	NA
WP_000704722.1|40475_41273_-	F4 (K88) fimbria minor subunit FaeH	NA	NA	NA	NA	NA
WP_001178538.1|41508_41781_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001575507.1|43239_43899_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001675602.1|45024_45222_+|transposase	transposase	transposase	A0A0P0ZBP6	Stx2-converting_phage	86.8	1.8e-25
WP_001746972.1|45376_45577_+|transposase	transposase	transposase	A0A0P0ZBY2	Stx2-converting_phage	72.6	1.6e-16
