The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_019902	Thioalkalivibrio nitratireducens DSM 14787, complete sequence	4002350	784385	831884	4002350	transposase,integrase,tRNA	Bacillus_phage(30.77%)	41	811911:811927	831685:831701
WP_015257706.1|784385_785519_+|tRNA	bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN	tRNA	NA	NA	NA	NA
WP_015257707.1|785515_786307_+	type IV pilus biogenesis/stability protein PilW	NA	NA	NA	NA	NA
WP_157092182.1|786299_787661_+	DUF4115 domain-containing protein	NA	NA	NA	NA	NA
WP_015257709.1|787704_788979_+|tRNA	histidine--tRNA ligase	tRNA	A0A2I2L577	Orpheovirus	26.0	4.3e-22
WP_015257710.1|789007_789622_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_043740148.1|789652_790810_+	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_043740150.1|790859_792281_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_015257713.1|792290_793451_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_043739270.1|793492_795307_-	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	24.0	2.0e-44
WP_015257715.1|795406_796552_-	nickel/cobalt transporter	NA	NA	NA	NA	NA
WP_015257716.1|796579_797242_-	DUF1007 family protein	NA	NA	NA	NA	NA
WP_015257717.1|797238_798648_-|tRNA	cysteine--tRNA ligase	tRNA	F1C979	Terra1_virus	31.9	2.3e-37
WP_015257718.1|798644_799115_-	phosphoribosyl-AMP cyclohydrolase	NA	NA	NA	NA	NA
WP_015257719.1|799300_802633_+	EAL domain-containing protein	NA	A0A127AWB9	Bacillus_phage	32.9	3.5e-15
WP_015257720.1|802686_803703_+	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA	NA
WP_157092183.1|804470_805733_+	diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	32.0	1.0e-15
WP_043739274.1|805748_806501_-	ferredoxin--NADP reductase	NA	NA	NA	NA	NA
WP_015257724.1|806860_807550_+	phosphate regulon transcriptional regulator PhoB	NA	W8CYM9	Bacillus_phage	36.4	2.2e-33
WP_015257725.1|807629_808964_+	phosphate regulon sensor histidine kinase PhoR	NA	A0A1V0SGX0	Hokovirus	27.6	8.2e-16
WP_015257726.1|809121_809994_+	sel1 repeat family protein	NA	NA	NA	NA	NA
WP_015257727.1|809998_810550_+	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_083499518.1|810599_811439_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015257729.1|811591_812548_+	phosphate ABC transporter substrate-binding protein PstS family protein	NA	NA	NA	NA	NA
811911:811927	attL	TCGAAGACCGCCACGGC	NA	NA	NA	NA
WP_043739276.1|812640_814938_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_015257731.1|814965_816618_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_015257732.1|816653_817511_+	phosphate ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	32.1	9.9e-15
WP_015257733.1|817712_818441_+	phosphate signaling complex protein PhoU	NA	NA	NA	NA	NA
WP_015257734.1|818549_818882_+	extracellular glutamate-binding receptor	NA	NA	NA	NA	NA
WP_043739279.1|818989_819667_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_015257738.1|820766_821318_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157092184.1|821524_823024_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043740166.1|823319_824234_+	pirin family protein	NA	NA	NA	NA	NA
WP_015257741.1|824485_824764_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A2L1IV28	Escherichia_phage	55.4	1.7e-24
WP_015257742.1|824775_825048_+	HigA family addiction module antidote protein	NA	NA	NA	NA	NA
WP_157092185.1|825340_825667_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_043739282.1|825633_825939_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015257744.1|826124_827642_+|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	56.6	9.3e-157
WP_015257746.1|828290_829514_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A218M9P0	Mycobacterium_phage	29.1	6.0e-05
WP_015257747.1|829510_830491_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_043739284.1|830487_831510_+|integrase	site-specific integrase	integrase	A0A1B3B212	Gordonia_phage	28.2	4.5e-06
WP_015257750.1|831638_831884_+|transposase	transposase	transposase	K4HZD4	Acidithiobacillus_phage	63.6	7.2e-19
831685:831701	attR	TCGAAGACCGCCACGGC	NA	NA	NA	NA
>prophage 2
NC_019902	Thioalkalivibrio nitratireducens DSM 14787, complete sequence	4002350	1426267	1436720	4002350	tRNA	Pseudomonas_phage(50.0%)	8	NA	NA
WP_043740335.1|1426267_1428850_-	DNA mismatch repair protein MutS	NA	A0A1V0SJ67	Klosneuvirus	23.8	1.7e-33
WP_015258258.1|1429309_1429804_+	CinA family protein	NA	B5TK85	Pseudomonas_phage	50.3	1.1e-29
WP_043740337.1|1430183_1431215_+	recombinase RecA	NA	A0A2D1GPX2	Mycobacterium_phage	62.9	6.6e-114
WP_015258260.1|1431180_1431672_+	regulatory protein RecX	NA	NA	NA	NA	NA
WP_015258261.1|1431737_1434353_+|tRNA	alanine--tRNA ligase	tRNA	A0A2K9L1X7	Tupanvirus	38.7	9.0e-83
WP_015258262.1|1434484_1435726_+	aspartate kinase	NA	NA	NA	NA	NA
WP_015258263.1|1435793_1436015_+	carbon storage regulator CsrA	NA	J7I430	Pseudomonas_phage	70.6	7.7e-12
WP_015258264.1|1436465_1436720_-	carbon storage regulator	NA	H2BD56	Pseudomonas_phage	48.2	1.6e-05
>prophage 3
NC_019902	Thioalkalivibrio nitratireducens DSM 14787, complete sequence	4002350	2132089	2200646	4002350	tail,tRNA,protease,integrase,plate	Ralstonia_phage(12.5%)	54	2125618:2125632	2169788:2169802
2125618:2125632	attL	CGGGCCGCTGCAGCA	NA	NA	NA	NA
WP_157092352.1|2132089_2133352_-|integrase	integrase arm-type DNA-binding domain-containing protein	integrase	A0A077KET4	Ralstonia_phage	44.5	2.3e-84
WP_015258893.1|2133961_2136064_+	STAS domain-containing protein	NA	NA	NA	NA	NA
WP_015258894.1|2136168_2136849_+	Bax inhibitor-1/YccA family protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	42.0	3.4e-26
WP_015258895.1|2136920_2137883_+	D-3-phosphoglycerate dehydrogenase	NA	A0A2R8FCS0	Cedratvirus	33.2	3.5e-24
WP_015258896.1|2137879_2138104_+	SlyX family protein	NA	NA	NA	NA	NA
WP_043740523.1|2138112_2138916_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_043739586.1|2139104_2139656_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015258899.1|2139991_2140357_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157092254.1|2140870_2143921_-	transcriptional regulator, SARP family protein	NA	NA	NA	NA	NA
WP_083499429.1|2144197_2145724_+	WG repeat-containing protein	NA	NA	NA	NA	NA
WP_015258904.1|2145786_2146269_-	YajQ family cyclic di-GMP-binding protein	NA	NA	NA	NA	NA
WP_043740526.1|2146290_2146677_+	DUF423 domain-containing protein	NA	NA	NA	NA	NA
WP_015258906.1|2146882_2147248_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015258908.1|2147586_2148588_-	thioredoxin fold domain-containing protein	NA	NA	NA	NA	NA
WP_015258909.1|2148820_2150107_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	51.4	1.4e-92
WP_015258910.1|2150211_2151486_-	DUF3380 domain-containing protein	NA	NA	NA	NA	NA
WP_015258911.1|2154271_2155228_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_157092353.1|2155227_2158551_-	DUF4157 domain-containing protein	NA	NA	NA	NA	NA
WP_015258913.1|2158915_2160862_-	ATP-binding protein	NA	A0A2D2W2C3	Stenotrophomonas_phage	30.6	1.7e-09
WP_015258914.1|2160858_2162517_-	hypothetical protein	NA	NA	NA	NA	NA
WP_058933132.1|2162517_2162727_-	hypothetical protein	NA	NA	NA	NA	NA
WP_043739591.1|2162731_2166145_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015258915.1|2166155_2167844_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015258916.1|2167863_2168757_-	hypothetical protein	NA	NA	NA	NA	NA
WP_043740532.1|2168768_2171141_-	NHL repeat domain protein	NA	NA	NA	NA	NA
2169788:2169802	attR	CGGGCCGCTGCAGCA	NA	NA	NA	NA
WP_015258918.1|2171306_2173472_-|plate	putative baseplate assembly protein	plate	NA	NA	NA	NA
WP_015258919.1|2173486_2173882_-	GPW/gp25 family protein	NA	A0A127KMC0	Cyanophage	35.0	1.3e-06
WP_015258920.1|2173891_2175538_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015258921.1|2175549_2176191_-	VgrG protein	NA	NA	NA	NA	NA
WP_015258922.1|2176399_2177443_-	phage late control D family protein	NA	NA	NA	NA	NA
WP_006745975.1|2177442_2177604_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015258923.1|2177624_2178512_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015258924.1|2178511_2179018_-|tail	phage tail protein	tail	NA	NA	NA	NA
WP_015258925.1|2179014_2180490_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006745980.1|2180494_2180956_-|tail	phage tail protein	tail	NA	NA	NA	NA
WP_015258926.1|2180973_2183181_-|tail	phage tail sheath subtilisin-like domain-containing protein	tail	A0A191SAM3	Nostoc_phage	27.6	1.3e-13
WP_157092255.1|2183190_2183973_-	carboxypeptidase regulatory-like domain-containing protein	NA	NA	NA	NA	NA
WP_043739592.1|2183969_2184557_-	DUF4255 domain-containing protein	NA	NA	NA	NA	NA
WP_043739593.1|2185527_2185992_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043739594.1|2186113_2186440_-	hypothetical protein	NA	NA	NA	NA	NA
WP_043739595.1|2186572_2187523_-	NmrA/HSCARG family protein	NA	A0A1V0SLC2	Klosneuvirus	32.0	1.6e-34
WP_043740533.1|2187827_2188445_+	L,D-transpeptidase	NA	NA	NA	NA	NA
WP_043739596.1|2188614_2188908_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015258936.1|2189032_2190007_-	L,D-transpeptidase family protein	NA	NA	NA	NA	NA
WP_015258937.1|2190312_2190534_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157092256.1|2190593_2190767_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015258939.1|2191083_2193543_-	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_043740535.1|2193821_2194931_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_015258941.1|2195038_2196100_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_015258942.1|2196096_2196867_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_083499430.1|2196863_2197595_-	FkbM family methyltransferase	NA	NA	NA	NA	NA
WP_015258945.1|2198535_2199609_-	glycosyltransferase family 9 protein	NA	NA	NA	NA	NA
WP_015258946.1|2199686_2199995_-	hypothetical protein	NA	NA	NA	NA	NA
WP_043740536.1|2200193_2200646_-|protease	hydrogenase maturation protease	protease	NA	NA	NA	NA
>prophage 4
NC_019902	Thioalkalivibrio nitratireducens DSM 14787, complete sequence	4002350	2929590	2995942	4002350	transposase,integrase	Staphylococcus_phage(37.5%)	54	2944142:2944160	2998212:2998230
WP_015259589.1|2929590_2930973_+|transposase	IS66 family transposase	transposase	NA	NA	NA	NA
WP_043740679.1|2935485_2935713_+	DUF433 domain-containing protein	NA	NA	NA	NA	NA
WP_043739753.1|2935712_2936045_+	DUF5615 family PIN-like protein	NA	NA	NA	NA	NA
WP_015259594.1|2936304_2936577_-	type II toxin-antitoxin system YafQ family toxin	NA	NA	NA	NA	NA
WP_015259596.1|2937390_2938116_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015259597.1|2938115_2939087_+	polyprenyl synthetase family protein	NA	NA	NA	NA	NA
WP_015259598.1|2939078_2939819_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_043739758.1|2940708_2941188_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015259601.1|2942014_2942641_+	TMEM165/GDT1 family protein	NA	NA	NA	NA	NA
WP_015259602.1|2942757_2943720_+	daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	30.1	4.0e-20
WP_043739759.1|2943719_2944484_+	ABC transporter permease	NA	NA	NA	NA	NA
2944142:2944160	attL	CCTGCTGGTGCTGGTGTTC	NA	NA	NA	NA
WP_043740680.1|2944560_2945949_-	serine hydrolase	NA	NA	NA	NA	NA
WP_015259605.1|2946084_2946474_+	fluoride efflux transporter CrcB	NA	NA	NA	NA	NA
WP_157092361.1|2946473_2946869_+	CrcB family protein	NA	NA	NA	NA	NA
WP_015259607.1|2946879_2947215_+	DUF190 domain-containing protein	NA	NA	NA	NA	NA
WP_083499462.1|2947520_2948180_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015259609.1|2948314_2949010_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_043739760.1|2949177_2949411_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015259611.1|2949457_2950015_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_015259615.1|2951978_2952818_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015259616.1|2954318_2956028_+	serine hydrolase	NA	A0A2D1GPS1	Mycobacterium_phage	29.0	1.7e-10
WP_015259617.1|2956284_2957964_-	DUF262 domain-containing protein	NA	NA	NA	NA	NA
WP_015258445.1|2958022_2958880_+|integrase	site-specific integrase	integrase	A0A1P8DJJ6	Virus_Rctr41k	28.0	6.9e-24
WP_015258446.1|2958872_2960006_+|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
WP_157092282.1|2960289_2960931_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015259619.1|2960952_2962194_+	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_015259621.1|2962348_2963458_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	37.0	7.7e-60
WP_015259622.1|2963487_2964168_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	36.1	6.2e-28
WP_015259623.1|2964366_2965521_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	34.4	2.2e-41
WP_015259624.1|2965531_2966065_-	transcriptional repressor NrdR	NA	NA	NA	NA	NA
WP_015259625.1|2966074_2967334_-	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	53.9	1.1e-102
WP_015259627.1|2967497_2968484_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_015259628.1|2968503_2971236_+	TRAP transporter permease	NA	NA	NA	NA	NA
WP_043739764.1|2971300_2971510_-	dodecin domain-containing protein	NA	NA	NA	NA	NA
WP_015259630.1|2971707_2972100_+	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_015259631.1|2972348_2972744_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043739766.1|2973234_2974398_+	alanine--glyoxylate aminotransferase family protein	NA	NA	NA	NA	NA
WP_043739767.1|2974416_2974674_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015259634.1|2974694_2975306_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_015259635.1|2975302_2975998_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_043740682.1|2976003_2977011_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_015259638.1|2978337_2979684_-	sigma 54-interacting transcriptional regulator	NA	NA	NA	NA	NA
WP_015259639.1|2979768_2980866_+	RNA ligase	NA	NA	NA	NA	NA
WP_015259640.1|2980885_2981491_-	RNA ligase partner protein	NA	NA	NA	NA	NA
WP_015259641.1|2981661_2982267_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_015259642.1|2982568_2983933_-|transposase	IS66 family transposase	transposase	S5WJH4	Leptospira_phage	41.2	3.0e-05
WP_015259645.1|2984199_2984715_+	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
WP_043739768.1|2984724_2984928_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015259647.1|2985284_2986685_+	LOG family protein	NA	NA	NA	NA	NA
WP_015259651.1|2987821_2989531_-	HAD hydrolase family protein	NA	NA	NA	NA	NA
WP_015259653.1|2990266_2992582_-|transposase	IS4 family transposase	transposase	NA	NA	NA	NA
WP_083499465.1|2993546_2994698_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_052316644.1|2995298_2995487_+	hypothetical protein	NA	NA	NA	NA	NA
WP_083499467.1|2995486_2995942_+|transposase	transposase zinc-binding domain-containing protein	transposase	NA	NA	NA	NA
2998212:2998230	attR	CCTGCTGGTGCTGGTGTTC	NA	NA	NA	NA
