bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NC_019382	Bordetella bronchiseptica 253, complete genome	2.1|1414078|30|NC_019382|CRT	NC_019382.1	Bordetella bronchiseptica 253, complete genome	100.00	30	0	0	1	30	5216966	5216937	1220996-1221069|1414060-1414209|1520299-1520422|2426000-2426074|2543159-2543267|2686457-2686542|3679673-3679809|4192388-4192471|4464842-4464935|4674060-4674144|5218848-5218985|5261201-5261338	3e-08	49.1	1.0	GGGACGCTGTCTGGGACGCTGCCTGGGACG	5216937-5216966	CGTCCCAGGCAGCGTCCCAGACAGCGTCCC	0
NC_019382	Bordetella bronchiseptica 253, complete genome	2.1|1414078|30|NC_019382|CRT	NC_019382.1	Bordetella bronchiseptica 253, complete genome	96.67	30	1	0	1	30	5216978	5216949	1220996-1221069|1414060-1414209|1520299-1520422|2426000-2426074|2543159-2543267|2686457-2686542|3679673-3679809|4192388-4192471|4464842-4464935|4674060-4674144|5218848-5218985|5261201-5261338	3e-07	46.0	1.0	GGGACGCTGTCTGGGACGCTGCCTGGGACG	5216949-5216978	CGTCCCAGACAGCGTCCCAGACAGCGTCCC	1
NC_019382	Bordetella bronchiseptica 253, complete genome	2.1|1414078|30|NC_019382|CRT	NC_019382.1	Bordetella bronchiseptica 253, complete genome	96.67	30	1	0	1	30	5217002	5216973	1220996-1221069|1414060-1414209|1520299-1520422|2426000-2426074|2543159-2543267|2686457-2686542|3679673-3679809|4192388-4192471|4464842-4464935|4674060-4674144|5218848-5218985|5261201-5261338	3e-07	46.0	1.0	GGGACGCTGTCTGGGACGCTGCCTGGGACG	5216973-5217002	CGTCCCAGGCAGCGTCCCAGGCAGCGTCCC	1
NC_019382	Bordetella bronchiseptica 253, complete genome	2.1|1414078|30|NC_019382|CRT	NC_019382.1	Bordetella bronchiseptica 253, complete genome	96.67	30	1	0	1	30	5218843	5218872	1220996-1221069|1414060-1414209|1520299-1520422|2426000-2426074|2543159-2543267|2686457-2686542|3679673-3679809|4192388-4192471|4464842-4464935|4674060-4674144|5218848-5218985|5261201-5261338	3e-07	46.0	1.0	GGGACGCTGTCTGGGACGCTGCCTGGGACG	5218843-5218872	GGGACGCTGCCTGGGACGCTGCCTGGGACG	1
NC_019382	Bordetella bronchiseptica 253, complete genome	2.1|1414078|30|NC_019382|CRT	NC_019382.1	Bordetella bronchiseptica 253, complete genome	96.67	30	1	0	1	30	5261196	5261225	1220996-1221069|1414060-1414209|1520299-1520422|2426000-2426074|2543159-2543267|2686457-2686542|3679673-3679809|4192388-4192471|4464842-4464935|4674060-4674144|5218848-5218985|5261201-5261338	3e-07	46.0	1.0	GGGACGCTGTCTGGGACGCTGCCTGGGACG	5261196-5261225	GGGACGCTGCCTGGGACGCTGCCTGGGACG	1
NC_019382	Bordetella bronchiseptica 253, complete genome	2.1|1414078|30|NC_019382|CRT	NC_019382.1	Bordetella bronchiseptica 253, complete genome	93.33	30	2	0	1	30	5216990	5216961	1220996-1221069|1414060-1414209|1520299-1520422|2426000-2426074|2543159-2543267|2686457-2686542|3679673-3679809|4192388-4192471|4464842-4464935|4674060-4674144|5218848-5218985|5261201-5261338	3e-06	42.8	1.0	GGGACGCTGTCTGGGACGCTGCCTGGGACG	5216961-5216990	CGTCCCAGACAGCGTCCCAGGCAGCGTCCC	2
NC_019382	Bordetella bronchiseptica 253, complete genome	2.2|1414126|18|NC_019382|CRT	NC_019382.1	Bordetella bronchiseptica 253, complete genome	100.00	18	0	0	1	18	5216918	5216901	1220996-1221069|1414060-1414209|1520299-1520422|2426000-2426074|2543159-2543267|2686457-2686542|3679673-3679809|4192388-4192471|4464842-4464935|4674060-4674144|5218848-5218985|5261201-5261338	0.018	30.1	1.0	AGGCCGCTGCCTGGGACG	5216901-5216918	CGTCCCAGGCAGCGGCCT	0
NC_019382	Bordetella bronchiseptica 253, complete genome	2.3|1414162|30|NC_019382|CRT	NC_019382.1	Bordetella bronchiseptica 253, complete genome	100.00	30	0	0	1	30	5216882	5216853	1220996-1221069|1414060-1414209|1520299-1520422|2426000-2426074|2543159-2543267|2686457-2686542|3679673-3679809|4192388-4192471|4464842-4464935|4674060-4674144|5218848-5218985|5261201-5261338	3e-08	49.1	1.0	GGGCCGCTAACAGGGCCGCTGCCCTGGGCG	5216853-5216882	CGCCCAGGGCAGCGGCCCTGTTAGCGGCCC	0
NC_019382	Bordetella bronchiseptica 253, complete genome	4.1|2426024|27|NC_019382|CRISPRCasFinder	NC_019382.1	Bordetella bronchiseptica 253, complete genome	100.00	27	0	0	1	27	2425974	2426000	1220996-1221069|1414060-1414209|1520299-1520422|2426000-2426074|2543159-2543267|2686457-2686542|3679673-3679809|4192388-4192471|4464842-4464935|4674060-4674144|5218848-5218985|5261201-5261338	9e-07	44.4	1.0	TGCCGATCAGCGCCAGGAACAGCAGCT	2425974-2426000	TGCCGATCAGCGCCAGGAACAGCAGCT	0
NC_019382	Bordetella bronchiseptica 253, complete genome	11.1|5218866|18|NC_019382|CRT	NC_019382.1	Bordetella bronchiseptica 253, complete genome	100.00	18	0	0	1	18	5216967	5216950	1220996-1221069|1414060-1414209|1520299-1520422|2426000-2426074|2543159-2543267|2686457-2686542|3679673-3679809|4192388-4192471|4464842-4464935|4674060-4674144|5218848-5218985|5261201-5261338	0.018	30.1	1.0	TGGGACGCTGTCTGGGAC	5216950-5216967	GTCCCAGACAGCGTCCCA	0
NC_019382	Bordetella bronchiseptica 253, complete genome	11.1|5218866|18|NC_019382|CRT	NC_019382.1	Bordetella bronchiseptica 253, complete genome	100.00	18	0	0	1	18	5216979	5216962	1220996-1221069|1414060-1414209|1520299-1520422|2426000-2426074|2543159-2543267|2686457-2686542|3679673-3679809|4192388-4192471|4464842-4464935|4674060-4674144|5218848-5218985|5261201-5261338	0.018	30.1	1.0	TGGGACGCTGTCTGGGAC	5216962-5216979	GTCCCAGACAGCGTCCCA	0
NC_019382	Bordetella bronchiseptica 253, complete genome	11.1|5218866|18|NC_019382|CRT	NC_019382.1	Bordetella bronchiseptica 253, complete genome	94.44	18	1	0	1	18	5216955	5216938	1220996-1221069|1414060-1414209|1520299-1520422|2426000-2426074|2543159-2543267|2686457-2686542|3679673-3679809|4192388-4192471|4464842-4464935|4674060-4674144|5218848-5218985|5261201-5261338	0.16	26.9	1.0	TGGGACGCTGTCTGGGAC	5216938-5216955	GTCCCAGGCAGCGTCCCA	1
NC_019382	Bordetella bronchiseptica 253, complete genome	11.1|5218866|18|NC_019382|CRT	NC_019382.1	Bordetella bronchiseptica 253, complete genome	94.44	18	1	0	1	18	5216991	5216974	1220996-1221069|1414060-1414209|1520299-1520422|2426000-2426074|2543159-2543267|2686457-2686542|3679673-3679809|4192388-4192471|4464842-4464935|4674060-4674144|5218848-5218985|5261201-5261338	0.16	26.9	1.0	TGGGACGCTGTCTGGGAC	5216974-5216991	GTCCCAGGCAGCGTCCCA	1
NC_019382	Bordetella bronchiseptica 253, complete genome	11.2|5218902|30|NC_019382|CRT	NC_019382.1	Bordetella bronchiseptica 253, complete genome	100.00	30	0	0	1	30	5216943	5216914	1220996-1221069|1414060-1414209|1520299-1520422|2426000-2426074|2543159-2543267|2686457-2686542|3679673-3679809|4192388-4192471|4464842-4464935|4674060-4674144|5218848-5218985|5261201-5261338	3e-08	49.1	1.0	TGGGACGCTGCCAGGGCCGCTGCCAAGGCC	5216914-5216943	GGCCTTGGCAGCGGCCCTGGCAGCGTCCCA	0
NC_019382	Bordetella bronchiseptica 253, complete genome	11.2|5218902|30|NC_019382|CRT	NC_019382.1	Bordetella bronchiseptica 253, complete genome	93.33	30	2	0	1	30	5216907	5216878	1220996-1221069|1414060-1414209|1520299-1520422|2426000-2426074|2543159-2543267|2686457-2686542|3679673-3679809|4192388-4192471|4464842-4464935|4674060-4674144|5218848-5218985|5261201-5261338	3e-06	42.8	1.0	TGGGACGCTGCCAGGGCCGCTGCCAAGGCC	5216878-5216907	GGCCCTGGCAGCGGGCCTGGCAGCGTCCCA	2
NC_019382	Bordetella bronchiseptica 253, complete genome	11.3|5218950|18|NC_019382|CRT	NC_019382.1	Bordetella bronchiseptica 253, complete genome	94.44	18	1	0	1	18	5216871	5216854	1220996-1221069|1414060-1414209|1520299-1520422|2426000-2426074|2543159-2543267|2686457-2686542|3679673-3679809|4192388-4192471|4464842-4464935|4674060-4674144|5218848-5218985|5261201-5261338	0.16	26.9	1.0	AGGCCCGCTGCCCTGGGC	5216854-5216871	GCCCAGGGCAGCGGCCCT	1
NC_019382	Bordetella bronchiseptica 253, complete genome	12.1|5261219|18|NC_019382|CRT	NC_019382.1	Bordetella bronchiseptica 253, complete genome	100.00	18	0	0	1	18	5216967	5216950	1220996-1221069|1414060-1414209|1520299-1520422|2426000-2426074|2543159-2543267|2686457-2686542|3679673-3679809|4192388-4192471|4464842-4464935|4674060-4674144|5218848-5218985|5261201-5261338	0.018	30.1	1.0	TGGGACGCTGTCTGGGAC	5216950-5216967	GTCCCAGACAGCGTCCCA	0
NC_019382	Bordetella bronchiseptica 253, complete genome	12.1|5261219|18|NC_019382|CRT	NC_019382.1	Bordetella bronchiseptica 253, complete genome	100.00	18	0	0	1	18	5216979	5216962	1220996-1221069|1414060-1414209|1520299-1520422|2426000-2426074|2543159-2543267|2686457-2686542|3679673-3679809|4192388-4192471|4464842-4464935|4674060-4674144|5218848-5218985|5261201-5261338	0.018	30.1	1.0	TGGGACGCTGTCTGGGAC	5216962-5216979	GTCCCAGACAGCGTCCCA	0
NC_019382	Bordetella bronchiseptica 253, complete genome	12.1|5261219|18|NC_019382|CRT	NC_019382.1	Bordetella bronchiseptica 253, complete genome	94.44	18	1	0	1	18	5216955	5216938	1220996-1221069|1414060-1414209|1520299-1520422|2426000-2426074|2543159-2543267|2686457-2686542|3679673-3679809|4192388-4192471|4464842-4464935|4674060-4674144|5218848-5218985|5261201-5261338	0.16	26.9	1.0	TGGGACGCTGTCTGGGAC	5216938-5216955	GTCCCAGGCAGCGTCCCA	1
NC_019382	Bordetella bronchiseptica 253, complete genome	12.1|5261219|18|NC_019382|CRT	NC_019382.1	Bordetella bronchiseptica 253, complete genome	94.44	18	1	0	1	18	5216991	5216974	1220996-1221069|1414060-1414209|1520299-1520422|2426000-2426074|2543159-2543267|2686457-2686542|3679673-3679809|4192388-4192471|4464842-4464935|4674060-4674144|5218848-5218985|5261201-5261338	0.16	26.9	1.0	TGGGACGCTGTCTGGGAC	5216974-5216991	GTCCCAGGCAGCGTCCCA	1
NC_019382	Bordetella bronchiseptica 253, complete genome	12.2|5261255|30|NC_019382|CRT	NC_019382.1	Bordetella bronchiseptica 253, complete genome	100.00	30	0	0	1	30	5216943	5216914	1220996-1221069|1414060-1414209|1520299-1520422|2426000-2426074|2543159-2543267|2686457-2686542|3679673-3679809|4192388-4192471|4464842-4464935|4674060-4674144|5218848-5218985|5261201-5261338	3e-08	49.1	1.0	TGGGACGCTGCCAGGGCCGCTGCCAAGGCC	5216914-5216943	GGCCTTGGCAGCGGCCCTGGCAGCGTCCCA	0
NC_019382	Bordetella bronchiseptica 253, complete genome	12.2|5261255|30|NC_019382|CRT	NC_019382.1	Bordetella bronchiseptica 253, complete genome	93.33	30	2	0	1	30	5216907	5216878	1220996-1221069|1414060-1414209|1520299-1520422|2426000-2426074|2543159-2543267|2686457-2686542|3679673-3679809|4192388-4192471|4464842-4464935|4674060-4674144|5218848-5218985|5261201-5261338	3e-06	42.8	1.0	TGGGACGCTGCCAGGGCCGCTGCCAAGGCC	5216878-5216907	GGCCCTGGCAGCGGGCCTGGCAGCGTCCCA	2
NC_019382	Bordetella bronchiseptica 253, complete genome	12.3|5261303|18|NC_019382|CRT	NC_019382.1	Bordetella bronchiseptica 253, complete genome	94.44	18	1	0	1	18	5216871	5216854	1220996-1221069|1414060-1414209|1520299-1520422|2426000-2426074|2543159-2543267|2686457-2686542|3679673-3679809|4192388-4192471|4464842-4464935|4674060-4674144|5218848-5218985|5261201-5261338	0.16	26.9	1.0	AGGCCCGCTGCCCTGGGC	5216854-5216871	GCCCAGGGCAGCGGCCCT	1
