assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000317635.1_ASM31763v1	NC_019779	Halothece sp. PCC 7418, complete sequence	1	751854-754744	1,1,1,2	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas14j,cas10,csm3gr7,csx10gr5,csm2gr11,csm6,PD-DExK,csx19,cas6,cas4,cas1,cas2	cas14k,Cas14c_CAS-V-F,c2c10_CAS-V-U3,c2c9_V-U4,Cas9_archaeal,cas3,Cas14u_CAS-V,RT,cas14j,cas10,csm3gr7,csx10gr5,csm2gr11,csm6,PD-DExK,csx19,cas6,cas4,cas1,cas2,csc1gr5,csc2gr7,cas10d,WYL,csa3,csx18,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,c2c5_V-U5,DinG,DEDDh,cas8u1,csb1gr7,csb2gr5	Type III-D,Type III-A,Type III-B,Type III-C	GTTTC---------AATCCCTAGGAAGGGATTAGGTTTATTGAAAC,GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC,GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC,GTTTC---------AATCCCTAGGAAGGGATTAGGTTTATTGAAAC	46,37,37,46	0	0	NA	NA	NA:NA:NA:NA	37,39,39,37	39	TypeIII-B,TypeIII-C,TypeIII-D,TypeIII-A,TypeV	cas14k,Cas14c_CAS-V-F,c2c10_CAS-V-U3,c2c9_V-U4,Cas9_archaeal,cas3,Cas14u_CAS-V,RT,cas14j,cas10,csm3gr7,csx10gr5,csm2gr11,csm6,PD-DExK,csx19,cas6,cas4,cas1,cas2,csc1gr5,csc2gr7,cas10d,WYL,csa3,csx18,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,c2c5_V-U5,DinG,DEDDh,cas8u1,csb1gr7,csb2gr5	NA|45aa|up_6|NC_019779.1_745217_745352_-,NA|260aa|up_2|NC_019779.1_748929_749709_-,NA|45aa|up_1|NC_019779.1_749812_749947_-,csm2gr11|139aa|down_3|NC_019779.1_759376_759793_+,PD-DExK|207aa|down_6|NC_019779.1_762060_762681_+,csx19|143aa|down_8|NC_019779.1_763661_764090_+	NA|479aa|up_9|NC_019779.1_742495_743932_-	COG0514, RecQ, Superfamily II DNA helicase [DNA replication, recombination, and repair]	NA|131aa|up_8|NC_019779.1_743975_744368_+	pfam14251, DUF4346, Domain of unknown function (DUF4346)	NA|243aa|up_7|NC_019779.1_744364_745093_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|45aa|up_6|NC_019779.1_745217_745352_-	NA	NA|169aa|up_5|NC_019779.1_747239_747746_+	PRK00704, PRK00704, photosystem I reaction center protein subunit XI; Provisional	NA|39aa|up_4|NC_019779.1_747796_747913_+	PRK11877, psaI, photosystem I reaction center subunit VIII; Reviewed	NA|269aa|up_3|NC_019779.1_748005_748812_-	PRK12704, PRK12704, phosphodiesterase; Provisional	NA|260aa|up_2|NC_019779.1_748929_749709_-	NA	NA|45aa|up_1|NC_019779.1_749812_749947_-	NA	cas14j|503aa|up_0|NC_019779.1_749994_751503_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	cas10|745aa|down_0|NC_019779.1_755281_757516_+	TIGR02577, thermophile-specific_DNA_repair_system, CRISPR-associated protein Cas10/Cmr2, subtype III-B	csm3gr7|220aa|down_1|NC_019779.1_757512_758172_+	COG1337, COG1337, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csx10gr5|402aa|down_2|NC_019779.1_758174_759380_+	TIGR02674, cas_cyan_RAMP_2, CRISPR-associated RAMP protein, Csx10 family	csm2gr11|139aa|down_3|NC_019779.1_759376_759793_+	NA	csm6|383aa|down_4|NC_019779.1_759922_761071_+	cd09742, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	csm3gr7|281aa|down_5|NC_019779.1_761137_761980_+	cd09683, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	PD-DExK|207aa|down_6|NC_019779.1_762060_762681_+	NA	csm3gr7|322aa|down_7|NC_019779.1_762690_763656_+	COG1337, COG1337, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csx19|143aa|down_8|NC_019779.1_763661_764090_+	NA	csm3gr7|348aa|down_9|NC_019779.1_764161_765205_+	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein
GCF_000317635.1_ASM31763v1	NC_019779	Halothece sp. PCC 7418, complete sequence	2	769221-777947	3,2,2,4,5	PILER-CR,CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no	cas14j,cas10,csm3gr7,csx10gr5,csm2gr11,csm6,PD-DExK,csx19,cas6,cas4,cas1,cas2,csc1gr5,csc2gr7,cas10d,cas3,WYL	cas14k,Cas14c_CAS-V-F,c2c10_CAS-V-U3,c2c9_V-U4,Cas9_archaeal,cas3,Cas14u_CAS-V,RT,cas14j,cas10,csm3gr7,csx10gr5,csm2gr11,csm6,PD-DExK,csx19,cas6,cas4,cas1,cas2,csc1gr5,csc2gr7,cas10d,WYL,csa3,csx18,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,c2c5_V-U5,DinG,DEDDh,cas8u1,csb1gr7,csb2gr5	Type III-B,Type III-C,Type I-D,Type III-D,Type III-A	GTTTCAATAAACCTAATCCCTTCCTAGGG---------ATTGAAAC,GTTTCAATAAACCTAATCCCTTCCTAGGGATTGAAAC,GTTTCAATAAACCTAATCCCTTCCTAGGGATTGAAAC,GTTTCAATAAACCTAATCCCTTCCTAGGG---------ATTGAAAC,GTTTCAATAAACCTAATCCCTTCCTAGGG---------ATTGAAAC	46,37,37,46,46	0	0	NA	NA	NA:NA:NA:NA:NA	116,119,119,116,116	119	TypeIII-B,TypeIII-C,TypeI-D,TypeIII-D,TypeIII-A,TypeV	cas14k,Cas14c_CAS-V-F,c2c10_CAS-V-U3,c2c9_V-U4,Cas9_archaeal,cas3,Cas14u_CAS-V,RT,cas14j,cas10,csm3gr7,csx10gr5,csm2gr11,csm6,PD-DExK,csx19,cas6,cas4,cas1,cas2,csc1gr5,csc2gr7,cas10d,WYL,csa3,csx18,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,c2c5_V-U5,DinG,DEDDh,cas8u1,csb1gr7,csb2gr5	PD-DExK|207aa|up_7|NC_019779.1_762060_762681_+,csx19|143aa|up_5|NC_019779.1_763661_764090_+,NA|51aa|down_5|NC_019779.1_784863_785016_-	csm6|383aa|up_9|NC_019779.1_759922_761071_+	cd09742, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	csm3gr7|281aa|up_8|NC_019779.1_761137_761980_+	cd09683, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	PD-DExK|207aa|up_7|NC_019779.1_762060_762681_+	NA	csm3gr7|322aa|up_6|NC_019779.1_762690_763656_+	COG1337, COG1337, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csx19|143aa|up_5|NC_019779.1_763661_764090_+	NA	csm3gr7|348aa|up_4|NC_019779.1_764161_765205_+	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein	cas6|272aa|up_3|NC_019779.1_766273_767089_+	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	cas4|196aa|up_2|NC_019779.1_767093_767681_+	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas1|335aa|up_1|NC_019779.1_767683_768688_+	TIGR04093, hypothetical_protein_L8106_25395, CRISPR-associated endonuclease Cas1, subtype CYANO	cas2|91aa|up_0|NC_019779.1_768717_768990_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	csc1gr5|247aa|down_0|NC_019779.1_777993_778734_-	cd09711, Csc1_I-D, CRISPR/Cas system-associated protein Csc1	csc2gr7|338aa|down_1|NC_019779.1_778811_779825_-	pfam18320, Csc2, Csc2 Crispr	cas10d|1104aa|down_2|NC_019779.1_779926_783238_-	TIGR03174, cas_Csc3, CRISPR type I-D/CYANO-associated protein Csc3/Cas10d	NA|151aa|down_3|NC_019779.1_783230_783683_-	pfam01934, DUF86, Protein of unknown function DUF86	NA|140aa|down_4|NC_019779.1_783679_784099_-	pfam18765, Polbeta, Polymerase beta, Nucleotidyltransferase	NA|51aa|down_5|NC_019779.1_784863_785016_-	NA	cas3|749aa|down_6|NC_019779.1_785003_787250_-	cd09710, Cas3_I-D, CRISPR/Cas system-associated protein Cas3; Distinct diverged subfamily of Cas3 helicase domain	WYL|283aa|down_7|NC_019779.1_787671_788520_+	pfam13280, WYL, WYL domain	NA|366aa|down_8|NC_019779.1_788578_789676_-	TIGR01151, Photosystem_QB_protein, photosystem II, DI subunit (also called Q(B))	NA|199aa|down_9|NC_019779.1_789897_790494_+	PRK10811, rne, ribonuclease E; Reviewed
GCF_000317635.1_ASM31763v1	NC_019779	Halothece sp. PCC 7418, complete sequence	3	1408446-1408534	3	CRISPRCasFinder	no	Cas14c_CAS-V-F,cas14j,Cas14u_CAS-V	cas14k,Cas14c_CAS-V-F,c2c10_CAS-V-U3,c2c9_V-U4,Cas9_archaeal,cas3,Cas14u_CAS-V,RT,cas14j,cas10,csm3gr7,csx10gr5,csm2gr11,csm6,PD-DExK,csx19,cas6,cas4,cas1,cas2,csc1gr5,csc2gr7,cas10d,WYL,csa3,csx18,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,c2c5_V-U5,DinG,DEDDh,cas8u1,csb1gr7,csb2gr5	Unclear	CCGATCGCGCTCCCAACACCCGATCGCGCT	30	0	0	NA	NA	NA	1	1	TypeV	cas14k,Cas14c_CAS-V-F,c2c10_CAS-V-U3,c2c9_V-U4,Cas9_archaeal,cas3,Cas14u_CAS-V,RT,cas14j,cas10,csm3gr7,csx10gr5,csm2gr11,csm6,PD-DExK,csx19,cas6,cas4,cas1,cas2,csc1gr5,csc2gr7,cas10d,WYL,csa3,csx18,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,c2c5_V-U5,DinG,DEDDh,cas8u1,csb1gr7,csb2gr5	NA|61aa|up_7|NC_019779.1_1404995_1405178_-,NA|101aa|up_6|NC_019779.1_1405190_1405493_+,NA|72aa|up_5|NC_019779.1_1405616_1405832_+,NA|261aa|down_4|NC_019779.1_1411749_1412532_-	NA|118aa|up_9|NC_019779.1_1404312_1404666_+	pfam13436, Gly-zipper_OmpA, Glycine-zipper domain	NA|107aa|up_8|NC_019779.1_1404678_1404999_+	pfam06411, HdeA, HdeA/HdeB family	NA|61aa|up_7|NC_019779.1_1404995_1405178_-	NA	NA|101aa|up_6|NC_019779.1_1405190_1405493_+	NA	NA|72aa|up_5|NC_019779.1_1405616_1405832_+	NA	NA|88aa|up_4|NC_019779.1_1405831_1406095_+	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning]	NA|85aa|up_3|NC_019779.1_1406203_1406458_+	pfam03683, UPF0175, Uncharacterized protein family (UPF0175)	NA|112aa|up_2|NC_019779.1_1406448_1406784_+	COG2405, COG2405, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]	cas14j|435aa|up_1|NC_019779.1_1406975_1408280_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|43aa|up_0|NC_019779.1_1408291_1408420_+	pfam11848, DUF3368, Domain of unknown function (DUF3368)	NA|138aa|down_0|NC_019779.1_1408748_1409162_-	COG1487, VapC, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]	NA|80aa|down_1|NC_019779.1_1409164_1409404_-	smart00966, SpoVT_AbrB, SpoVT / AbrB like domain	Cas14u_CAS-V|491aa|down_2|NC_019779.1_1409617_1411090_-	TIGR01766, Putative_transposase_MJ0751, transposase, IS605 OrfB family, central region	NA|140aa|down_3|NC_019779.1_1411113_1411533_+	pfam01797, Y1_Tnp, Transposase IS200 like	NA|261aa|down_4|NC_019779.1_1411749_1412532_-	NA	NA|144aa|down_5|NC_019779.1_1412591_1413023_-	TIGR01710, Type_II_secretion_system_protein_G, type II secretion system protein G	NA|151aa|down_6|NC_019779.1_1413427_1413880_-	TIGR01710, Type_II_secretion_system_protein_G, type II secretion system protein G	NA|737aa|down_7|NC_019779.1_1414173_1416384_+	COG3914, Spy, Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]	NA|243aa|down_8|NC_019779.1_1416364_1417093_+	COG4627, COG4627, Uncharacterized protein conserved in bacteria [Function unknown]	NA|253aa|down_9|NC_019779.1_1417149_1417908_+	pfam00685, Sulfotransfer_1, Sulfotransferase domain
GCF_000317635.1_ASM31763v1	NC_019779	Halothece sp. PCC 7418, complete sequence	4	1413152-1413295	4	CRISPRCasFinder	no	Cas14c_CAS-V-F,cas14j,Cas14u_CAS-V	cas14k,Cas14c_CAS-V-F,c2c10_CAS-V-U3,c2c9_V-U4,Cas9_archaeal,cas3,Cas14u_CAS-V,RT,cas14j,cas10,csm3gr7,csx10gr5,csm2gr11,csm6,PD-DExK,csx19,cas6,cas4,cas1,cas2,csc1gr5,csc2gr7,cas10d,WYL,csa3,csx18,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,c2c5_V-U5,DinG,DEDDh,cas8u1,csb1gr7,csb2gr5	Unclear	GGGAATGGTTGATCAAGTTTTTACGAATGAATTTAGAACTGCTATA	46	1	1	1413198-1413249	NC_019779.1_1413103-1413154	NA	1	1	TypeV	cas14k,Cas14c_CAS-V-F,c2c10_CAS-V-U3,c2c9_V-U4,Cas9_archaeal,cas3,Cas14u_CAS-V,RT,cas14j,cas10,csm3gr7,csx10gr5,csm2gr11,csm6,PD-DExK,csx19,cas6,cas4,cas1,cas2,csc1gr5,csc2gr7,cas10d,WYL,csa3,csx18,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,c2c5_V-U5,DinG,DEDDh,cas8u1,csb1gr7,csb2gr5	NA|80aa|up_6|NC_019779.1_1408425_1408665_-,NA|261aa|up_1|NC_019779.1_1411749_1412532_-,NA|81aa|down_5|NC_019779.1_1418608_1418851_+,NA|75aa|down_7|NC_019779.1_1421899_1422124_-,NA|66aa|down_8|NC_019779.1_1422135_1422333_-	NA|112aa|up_9|NC_019779.1_1406448_1406784_+	COG2405, COG2405, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]	cas14j|435aa|up_8|NC_019779.1_1406975_1408280_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|43aa|up_7|NC_019779.1_1408291_1408420_+	pfam11848, DUF3368, Domain of unknown function (DUF3368)	NA|80aa|up_6|NC_019779.1_1408425_1408665_-	NA	NA|138aa|up_5|NC_019779.1_1408748_1409162_-	COG1487, VapC, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]	NA|80aa|up_4|NC_019779.1_1409164_1409404_-	smart00966, SpoVT_AbrB, SpoVT / AbrB like domain	Cas14u_CAS-V|491aa|up_3|NC_019779.1_1409617_1411090_-	TIGR01766, Putative_transposase_MJ0751, transposase, IS605 OrfB family, central region	NA|140aa|up_2|NC_019779.1_1411113_1411533_+	pfam01797, Y1_Tnp, Transposase IS200 like	NA|261aa|up_1|NC_019779.1_1411749_1412532_-	NA	NA|144aa|up_0|NC_019779.1_1412591_1413023_-	TIGR01710, Type_II_secretion_system_protein_G, type II secretion system protein G	NA|151aa|down_0|NC_019779.1_1413427_1413880_-	TIGR01710, Type_II_secretion_system_protein_G, type II secretion system protein G	NA|737aa|down_1|NC_019779.1_1414173_1416384_+	COG3914, Spy, Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]	NA|243aa|down_2|NC_019779.1_1416364_1417093_+	COG4627, COG4627, Uncharacterized protein conserved in bacteria [Function unknown]	NA|253aa|down_3|NC_019779.1_1417149_1417908_+	pfam00685, Sulfotransfer_1, Sulfotransferase domain	NA|123aa|down_4|NC_019779.1_1417949_1418318_-	TIGR03939, PGA_TPR_OMP, poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA	NA|81aa|down_5|NC_019779.1_1418608_1418851_+	NA	NA|852aa|down_6|NC_019779.1_1418859_1421415_-	TIGR00947, 2A73, putative bicarbonate transporter, IctB family	NA|75aa|down_7|NC_019779.1_1421899_1422124_-	NA	NA|66aa|down_8|NC_019779.1_1422135_1422333_-	NA	NA|109aa|down_9|NC_019779.1_1422301_1422628_-	COG4115, COG4115, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_000317635.1_ASM31763v1	NC_019779	Halothece sp. PCC 7418, complete sequence	5	1439665-1439848	5	CRISPRCasFinder	no	csx18,cas1,cas2	cas14k,Cas14c_CAS-V-F,c2c10_CAS-V-U3,c2c9_V-U4,Cas9_archaeal,cas3,Cas14u_CAS-V,RT,cas14j,cas10,csm3gr7,csx10gr5,csm2gr11,csm6,PD-DExK,csx19,cas6,cas4,cas1,cas2,csc1gr5,csc2gr7,cas10d,WYL,csa3,csx18,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,c2c5_V-U5,DinG,DEDDh,cas8u1,csb1gr7,csb2gr5	Unclear	CCTTTCAAAGGGGGGCGAAGGGGGGATTAGAGAAAC	36	0	0	NA	NA	NA	2	2	Unclear	cas14k,Cas14c_CAS-V-F,c2c10_CAS-V-U3,c2c9_V-U4,Cas9_archaeal,cas3,Cas14u_CAS-V,RT,cas14j,cas10,csm3gr7,csx10gr5,csm2gr11,csm6,PD-DExK,csx19,cas6,cas4,cas1,cas2,csc1gr5,csc2gr7,cas10d,WYL,csa3,csx18,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,c2c5_V-U5,DinG,DEDDh,cas8u1,csb1gr7,csb2gr5	NA|70aa|up_9|NC_019779.1_1430056_1430266_-,NA|109aa|up_1|NC_019779.1_1438287_1438614_-,csx18|90aa|up_0|NC_019779.1_1438800_1439070_+,cmr5gr11|132aa|down_7|NC_019779.1_1465068_1465464_+	NA|70aa|up_9|NC_019779.1_1430056_1430266_-	NA	NA|836aa|up_8|NC_019779.1_1430392_1432900_-	pfam04932, Wzy_C, O-Antigen ligase	NA|493aa|up_7|NC_019779.1_1433083_1434562_+	TIGR04095, type_III_restriction_protein_res_subunit, DNA phosphorothioation system restriction enzyme	NA|71aa|up_6|NC_019779.1_1434798_1435011_+	pfam11127, DUF2892, Protein of unknown function (DUF2892)	NA|178aa|up_5|NC_019779.1_1435044_1435578_+	PRK13474, PRK13474, cytochrome b6-f complex iron-sulfur subunit; Provisional	NA|130aa|up_4|NC_019779.1_1435596_1435986_+	cd00851, MTH1175, This uncharacterized conserved protein belongs to a family of iron-molybdenum cluster-binding proteins that includes NifX, NifB, and NifY, all of which are involved in the synthesis of an iron-molybdenum cofactor (FeMo-co) that binds the active site of the dinitrogenase enzyme	NA|223aa|up_3|NC_019779.1_1436012_1436681_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|283aa|up_2|NC_019779.1_1436722_1437571_+	cd07713, DHPS-like_MBL-fold, Methanocaldococcus jannaschii dihydropteroate synthase, Thermoanaerobacter tengcongensis Tflp, and related proteins; MBL-fold metallo hydrolase domain	NA|109aa|up_1|NC_019779.1_1438287_1438614_-	NA	csx18|90aa|up_0|NC_019779.1_1438800_1439070_+	NA	cas1|328aa|down_0|NC_019779.1_1439879_1440863_+	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	cas2|93aa|down_1|NC_019779.1_1440866_1441145_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|141aa|down_2|NC_019779.1_1441207_1441630_-	cd09873, PIN_Pae0151-like, VapC-like PIN domain of the Pyrobaculum aerophilum Pae0151 and Pae2754 proteins and homologs	NA|85aa|down_3|NC_019779.1_1441626_1441881_-	PRK13982, PRK13982, bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional	cas10|1000aa|down_4|NC_019779.1_1459909_1462909_+	pfam12469, DUF3692, CRISPR-associated protein	cmr3gr5|371aa|down_5|NC_019779.1_1462921_1464034_+	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3	cmr4gr7|284aa|down_6|NC_019779.1_1464118_1464970_+	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4	cmr5gr11|132aa|down_7|NC_019779.1_1465068_1465464_+	NA	cmr6gr7|645aa|down_8|NC_019779.1_1465468_1467403_+	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6	csm6|372aa|down_9|NC_019779.1_1467862_1468978_+	cd09742, Csm6_III-A, CRISPR/Cas system-associated protein Csm6
GCF_000317635.1_ASM31763v1	NC_019779	Halothece sp. PCC 7418, complete sequence	6	1442117-1459695	6,3,6,7,8	CRISPRCasFinder,CRT,PILER-CR,PILER-CR,PILER-CR	no	csx18,cas1,cas2,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csm6,csx1,WYL	cas14k,Cas14c_CAS-V-F,c2c10_CAS-V-U3,c2c9_V-U4,Cas9_archaeal,cas3,Cas14u_CAS-V,RT,cas14j,cas10,csm3gr7,csx10gr5,csm2gr11,csm6,PD-DExK,csx19,cas6,cas4,cas1,cas2,csc1gr5,csc2gr7,cas10d,WYL,csa3,csx18,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,c2c5_V-U5,DinG,DEDDh,cas8u1,csb1gr7,csb2gr5	Type III-D,Type III-A,Type III-B,Type III-C	GTCTCTTTTCCTAAGAGAAACTAATTGAATGGAAAC,GTCTCTTTTCCTAAGAGAAACTAATTGAATGGAAAC,GTCTCTTTTCCTAAGAGAAACTAATTGAATGGAAAC,GTCTCTTTTCCTAAGAGAAACTAATTGAATGGAAAC,GTCTCTTTTCCTAAGAGAAACTAATTGAATGGAAAC	36,36,36,36,36	0	0	NA	NA	NA:NA:NA:NA:NA	236,236,230,230,230	236	TypeIII-D,TypeIII-A,TypeIII-B,TypeIII-C	cas14k,Cas14c_CAS-V-F,c2c10_CAS-V-U3,c2c9_V-U4,Cas9_archaeal,cas3,Cas14u_CAS-V,RT,cas14j,cas10,csm3gr7,csx10gr5,csm2gr11,csm6,PD-DExK,csx19,cas6,cas4,cas1,cas2,csc1gr5,csc2gr7,cas10d,WYL,csa3,csx18,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,c2c5_V-U5,DinG,DEDDh,cas8u1,csb1gr7,csb2gr5	NA|109aa|up_5|NC_019779.1_1438287_1438614_-,csx18|90aa|up_4|NC_019779.1_1438800_1439070_+,cmr5gr11|132aa|down_3|NC_019779.1_1465068_1465464_+,NA|195aa|down_8|NC_019779.1_1471092_1471677_-,NA|418aa|down_9|NC_019779.1_1471666_1472920_-	NA|178aa|up_9|NC_019779.1_1435044_1435578_+	PRK13474, PRK13474, cytochrome b6-f complex iron-sulfur subunit; Provisional	NA|130aa|up_8|NC_019779.1_1435596_1435986_+	cd00851, MTH1175, This uncharacterized conserved protein belongs to a family of iron-molybdenum cluster-binding proteins that includes NifX, NifB, and NifY, all of which are involved in the synthesis of an iron-molybdenum cofactor (FeMo-co) that binds the active site of the dinitrogenase enzyme	NA|223aa|up_7|NC_019779.1_1436012_1436681_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|283aa|up_6|NC_019779.1_1436722_1437571_+	cd07713, DHPS-like_MBL-fold, Methanocaldococcus jannaschii dihydropteroate synthase, Thermoanaerobacter tengcongensis Tflp, and related proteins; MBL-fold metallo hydrolase domain	NA|109aa|up_5|NC_019779.1_1438287_1438614_-	NA	csx18|90aa|up_4|NC_019779.1_1438800_1439070_+	NA	cas1|328aa|up_3|NC_019779.1_1439879_1440863_+	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	cas2|93aa|up_2|NC_019779.1_1440866_1441145_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|141aa|up_1|NC_019779.1_1441207_1441630_-	cd09873, PIN_Pae0151-like, VapC-like PIN domain of the Pyrobaculum aerophilum Pae0151 and Pae2754 proteins and homologs	NA|85aa|up_0|NC_019779.1_1441626_1441881_-	PRK13982, PRK13982, bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional	cas10|1000aa|down_0|NC_019779.1_1459909_1462909_+	pfam12469, DUF3692, CRISPR-associated protein	cmr3gr5|371aa|down_1|NC_019779.1_1462921_1464034_+	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3	cmr4gr7|284aa|down_2|NC_019779.1_1464118_1464970_+	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4	cmr5gr11|132aa|down_3|NC_019779.1_1465068_1465464_+	NA	cmr6gr7|645aa|down_4|NC_019779.1_1465468_1467403_+	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6	csm6|372aa|down_5|NC_019779.1_1467862_1468978_+	cd09742, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	csx1|404aa|down_6|NC_019779.1_1468985_1470197_-	pfam09455, Cas_DxTHG, CRISPR-associated (Cas) DxTHG family	NA|228aa|down_7|NC_019779.1_1470279_1470963_-	TIGR03724, Probable_serine/threonine-protein_kinase, Kae1-associated kinase Bud32	NA|195aa|down_8|NC_019779.1_1471092_1471677_-	NA	NA|418aa|down_9|NC_019779.1_1471666_1472920_-	NA
GCF_000317635.1_ASM31763v1	NC_019779	Halothece sp. PCC 7418, complete sequence	7	1853467-1853575	7	CRISPRCasFinder	no		cas14k,Cas14c_CAS-V-F,c2c10_CAS-V-U3,c2c9_V-U4,Cas9_archaeal,cas3,Cas14u_CAS-V,RT,cas14j,cas10,csm3gr7,csx10gr5,csm2gr11,csm6,PD-DExK,csx19,cas6,cas4,cas1,cas2,csc1gr5,csc2gr7,cas10d,WYL,csa3,csx18,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,c2c5_V-U5,DinG,DEDDh,cas8u1,csb1gr7,csb2gr5	Orphan	ATCCTGGCTTTTGCTTCGGCGAGACGGGCTT	31	0	0	NA	NA	NA	1	1	Orphan	cas14k,Cas14c_CAS-V-F,c2c10_CAS-V-U3,c2c9_V-U4,Cas9_archaeal,cas3,Cas14u_CAS-V,RT,cas14j,cas10,csm3gr7,csx10gr5,csm2gr11,csm6,PD-DExK,csx19,cas6,cas4,cas1,cas2,csc1gr5,csc2gr7,cas10d,WYL,csa3,csx18,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,c2c5_V-U5,DinG,DEDDh,cas8u1,csb1gr7,csb2gr5	NA|280aa|up_9|NC_019779.1_1842583_1843423_-,NA|69aa|down_1|NC_019779.1_1856207_1856414_-,NA|152aa|down_8|NC_019779.1_1862103_1862559_+	NA|280aa|up_9|NC_019779.1_1842583_1843423_-	NA	NA|765aa|up_8|NC_019779.1_1843442_1845737_-	PRK09554, feoB, Fe(2+) transporter permease subunit FeoB	NA|194aa|up_7|NC_019779.1_1845749_1846331_-	COG1918, FeoA, Fe2+ transport system protein A [Inorganic ion transport and metabolism]	NA|184aa|up_6|NC_019779.1_1846554_1847106_-	cd01055, Nonheme_Ferritin, nonheme-containing ferritins	NA|104aa|up_5|NC_019779.1_1847228_1847540_-	CHL00015, ndhE, NADH dehydrogenase subunit 4L	NA|206aa|up_4|NC_019779.1_1847561_1848179_-	PRK06638, PRK06638, NADH-quinone oxidoreductase subunit J	NA|210aa|up_3|NC_019779.1_1848316_1848946_-	TIGR00403, NADPH-quinone_oxidoreductase_subunit_I, NADH-plastoquinone oxidoreductase subunit I protein	NA|373aa|up_2|NC_019779.1_1848997_1850116_-	CHL00032, ndhA, NADH dehydrogenase subunit 1	NA|379aa|up_1|NC_019779.1_1850279_1851416_-	PRK14036, PRK14036, citrate synthase; Provisional	NA|293aa|up_0|NC_019779.1_1851586_1852465_+	pfam01148, CTP_transf_1, Cytidylyltransferase family	NA|631aa|down_0|NC_019779.1_1854244_1856137_+	pfam06241, Castor_Poll_mid, Castor and Pollux, part of voltage-gated ion channel	NA|69aa|down_1|NC_019779.1_1856207_1856414_-	NA	NA|415aa|down_2|NC_019779.1_1856552_1857797_+	PRK07364, PRK07364, FAD-dependent hydroxylase	NA|595aa|down_3|NC_019779.1_1858034_1859819_+	COG3975, COG3975, Predicted protease with the C-terminal PDZ domain [General function prediction only]	NA|189aa|down_4|NC_019779.1_1860137_1860704_+	pfam05685, Uma2, Putative restriction endonuclease	NA|68aa|down_5|NC_019779.1_1860995_1861199_+	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General    function prediction only]	NA|70aa|down_6|NC_019779.1_1861195_1861405_+	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,	NA|75aa|down_7|NC_019779.1_1861439_1861664_-	TIGR02574, hypothetical_protein, putative addiction module component, TIGR02574 family	NA|152aa|down_8|NC_019779.1_1862103_1862559_+	NA	NA|203aa|down_9|NC_019779.1_1862555_1863164_+	pfam16289, DUF4935, Domain of unknown function (DUF4935)
GCF_000317635.1_ASM31763v1	NC_019779	Halothece sp. PCC 7418, complete sequence	8	1860784-1860911	8	CRISPRCasFinder	no		cas14k,Cas14c_CAS-V-F,c2c10_CAS-V-U3,c2c9_V-U4,Cas9_archaeal,cas3,Cas14u_CAS-V,RT,cas14j,cas10,csm3gr7,csx10gr5,csm2gr11,csm6,PD-DExK,csx19,cas6,cas4,cas1,cas2,csc1gr5,csc2gr7,cas10d,WYL,csa3,csx18,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,c2c5_V-U5,DinG,DEDDh,cas8u1,csb1gr7,csb2gr5	Orphan	ATCGCGCCTCCTCATCAAAATTTGATCAGATATTTT	36	0	0	NA	NA	NA	1	1	Orphan	cas14k,Cas14c_CAS-V-F,c2c10_CAS-V-U3,c2c9_V-U4,Cas9_archaeal,cas3,Cas14u_CAS-V,RT,cas14j,cas10,csm3gr7,csx10gr5,csm2gr11,csm6,PD-DExK,csx19,cas6,cas4,cas1,cas2,csc1gr5,csc2gr7,cas10d,WYL,csa3,csx18,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,c2c5_V-U5,DinG,DEDDh,cas8u1,csb1gr7,csb2gr5	NA|69aa|up_3|NC_019779.1_1856207_1856414_-,NA|152aa|down_3|NC_019779.1_1862103_1862559_+	NA|210aa|up_9|NC_019779.1_1848316_1848946_-	TIGR00403, NADPH-quinone_oxidoreductase_subunit_I, NADH-plastoquinone oxidoreductase subunit I protein	NA|373aa|up_8|NC_019779.1_1848997_1850116_-	CHL00032, ndhA, NADH dehydrogenase subunit 1	NA|379aa|up_7|NC_019779.1_1850279_1851416_-	PRK14036, PRK14036, citrate synthase; Provisional	NA|293aa|up_6|NC_019779.1_1851586_1852465_+	pfam01148, CTP_transf_1, Cytidylyltransferase family	NA|480aa|up_5|NC_019779.1_1852496_1853936_-	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|631aa|up_4|NC_019779.1_1854244_1856137_+	pfam06241, Castor_Poll_mid, Castor and Pollux, part of voltage-gated ion channel	NA|69aa|up_3|NC_019779.1_1856207_1856414_-	NA	NA|415aa|up_2|NC_019779.1_1856552_1857797_+	PRK07364, PRK07364, FAD-dependent hydroxylase	NA|595aa|up_1|NC_019779.1_1858034_1859819_+	COG3975, COG3975, Predicted protease with the C-terminal PDZ domain [General function prediction only]	NA|189aa|up_0|NC_019779.1_1860137_1860704_+	pfam05685, Uma2, Putative restriction endonuclease	NA|68aa|down_0|NC_019779.1_1860995_1861199_+	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General    function prediction only]	NA|70aa|down_1|NC_019779.1_1861195_1861405_+	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,	NA|75aa|down_2|NC_019779.1_1861439_1861664_-	TIGR02574, hypothetical_protein, putative addiction module component, TIGR02574 family	NA|152aa|down_3|NC_019779.1_1862103_1862559_+	NA	NA|203aa|down_4|NC_019779.1_1862555_1863164_+	pfam16289, DUF4935, Domain of unknown function (DUF4935)	NA|68aa|down_5|NC_019779.1_1863342_1863546_+	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system	NA|77aa|down_6|NC_019779.1_1863542_1863773_+	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,	NA|96aa|down_7|NC_019779.1_1864168_1864456_-	cd09174, PLDc_Nuc_like_unchar2, Putative catalytic domain of uncharacterized hypothetical proteins closely related to Nuc, , an endonuclease from Salmonella typhimurium	NA|175aa|down_8|NC_019779.1_1864440_1864965_-	cd09174, PLDc_Nuc_like_unchar2, Putative catalytic domain of uncharacterized hypothetical proteins closely related to Nuc, , an endonuclease from Salmonella typhimurium	NA|352aa|down_9|NC_019779.1_1865043_1866099_-	PRK13654, PRK13654, magnesium-protoporphyrin IX monomethyl ester cyclase; Provisional
GCF_000317635.1_ASM31763v1	NC_019779	Halothece sp. PCC 7418, complete sequence	9	1863196-1863302	9	CRISPRCasFinder	no		cas14k,Cas14c_CAS-V-F,c2c10_CAS-V-U3,c2c9_V-U4,Cas9_archaeal,cas3,Cas14u_CAS-V,RT,cas14j,cas10,csm3gr7,csx10gr5,csm2gr11,csm6,PD-DExK,csx19,cas6,cas4,cas1,cas2,csc1gr5,csc2gr7,cas10d,WYL,csa3,csx18,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,c2c5_V-U5,DinG,DEDDh,cas8u1,csb1gr7,csb2gr5	Orphan	CATCTCAAGCTCGATCGCGCCTCCTCATCAAA	32	0	0	NA	NA	NA	1	1	Orphan	cas14k,Cas14c_CAS-V-F,c2c10_CAS-V-U3,c2c9_V-U4,Cas9_archaeal,cas3,Cas14u_CAS-V,RT,cas14j,cas10,csm3gr7,csx10gr5,csm2gr11,csm6,PD-DExK,csx19,cas6,cas4,cas1,cas2,csc1gr5,csc2gr7,cas10d,WYL,csa3,csx18,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,c2c5_V-U5,DinG,DEDDh,cas8u1,csb1gr7,csb2gr5	NA|69aa|up_8|NC_019779.1_1856207_1856414_-,NA|152aa|up_1|NC_019779.1_1862103_1862559_+,NA	NA|631aa|up_9|NC_019779.1_1854244_1856137_+	pfam06241, Castor_Poll_mid, Castor and Pollux, part of voltage-gated ion channel	NA|69aa|up_8|NC_019779.1_1856207_1856414_-	NA	NA|415aa|up_7|NC_019779.1_1856552_1857797_+	PRK07364, PRK07364, FAD-dependent hydroxylase	NA|595aa|up_6|NC_019779.1_1858034_1859819_+	COG3975, COG3975, Predicted protease with the C-terminal PDZ domain [General function prediction only]	NA|189aa|up_5|NC_019779.1_1860137_1860704_+	pfam05685, Uma2, Putative restriction endonuclease	NA|68aa|up_4|NC_019779.1_1860995_1861199_+	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General    function prediction only]	NA|70aa|up_3|NC_019779.1_1861195_1861405_+	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,	NA|75aa|up_2|NC_019779.1_1861439_1861664_-	TIGR02574, hypothetical_protein, putative addiction module component, TIGR02574 family	NA|152aa|up_1|NC_019779.1_1862103_1862559_+	NA	NA|203aa|up_0|NC_019779.1_1862555_1863164_+	pfam16289, DUF4935, Domain of unknown function (DUF4935)	NA|68aa|down_0|NC_019779.1_1863342_1863546_+	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system	NA|77aa|down_1|NC_019779.1_1863542_1863773_+	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,	NA|96aa|down_2|NC_019779.1_1864168_1864456_-	cd09174, PLDc_Nuc_like_unchar2, Putative catalytic domain of uncharacterized hypothetical proteins closely related to Nuc, , an endonuclease from Salmonella typhimurium	NA|175aa|down_3|NC_019779.1_1864440_1864965_-	cd09174, PLDc_Nuc_like_unchar2, Putative catalytic domain of uncharacterized hypothetical proteins closely related to Nuc, , an endonuclease from Salmonella typhimurium	NA|352aa|down_4|NC_019779.1_1865043_1866099_-	PRK13654, PRK13654, magnesium-protoporphyrin IX monomethyl ester cyclase; Provisional	NA|241aa|down_5|NC_019779.1_1866268_1866991_+	COG5398, COG5398, Heme oxygenase [Inorganic ion transport and metabolism]	NA|464aa|down_6|NC_019779.1_1867263_1868655_+	PRK09249, PRK09249, coproporphyrinogen dehydrogenase	NA|765aa|down_7|NC_019779.1_1868770_1871065_-	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B	NA|477aa|down_8|NC_019779.1_1872002_1873433_-	COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism]	NA|215aa|down_9|NC_019779.1_1873520_1874165_-	pfam05685, Uma2, Putative restriction endonuclease
GCF_000317635.1_ASM31763v1	NC_019779	Halothece sp. PCC 7418, complete sequence	10	2090436-2094051	9,10,4,10	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas3,cas8u1,csb1gr7,csb2gr5	cas14k,Cas14c_CAS-V-F,c2c10_CAS-V-U3,c2c9_V-U4,Cas9_archaeal,cas3,Cas14u_CAS-V,RT,cas14j,cas10,csm3gr7,csx10gr5,csm2gr11,csm6,PD-DExK,csx19,cas6,cas4,cas1,cas2,csc1gr5,csc2gr7,cas10d,WYL,csa3,csx18,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,c2c5_V-U5,DinG,DEDDh,cas8u1,csb1gr7,csb2gr5	Unclear	GTTTAAATCCCCGATTTTCAGGGGACTAAATTGAAAC,GTTTAAATCCCCGATTTTCAGGGGACTAAATTGAAAC,GTTTAAATCCCCGATTTTCAGGGGACTAAATTGAAAC,GTTTAAATCCCCGATTTTCAGGGGACTAAATTGAAA	37,37,37,36	0	0	NA	NA	NA:NA:NA:NA	46,49,49,46	49	Unclear	cas14k,Cas14c_CAS-V-F,c2c10_CAS-V-U3,c2c9_V-U4,Cas9_archaeal,cas3,Cas14u_CAS-V,RT,cas14j,cas10,csm3gr7,csx10gr5,csm2gr11,csm6,PD-DExK,csx19,cas6,cas4,cas1,cas2,csc1gr5,csc2gr7,cas10d,WYL,csa3,csx18,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,c2c5_V-U5,DinG,DEDDh,cas8u1,csb1gr7,csb2gr5	NA,NA|74aa|down_0|NC_019779.1_2094241_2094463_+,NA|100aa|down_1|NC_019779.1_2094760_2095060_+,NA|112aa|down_3|NC_019779.1_2097410_2097746_-	NA|250aa|up_9|NC_019779.1_2077016_2077766_-	pfam02397, Bac_transf, Bacterial sugar transferase	NA|441aa|up_8|NC_019779.1_2078336_2079659_-	cd17484, MFS_FBT, Folate-biopterin transporter of the Major Facilitator Superfamily of transporters	NA|302aa|up_7|NC_019779.1_2079677_2080583_-	PLN02578, PLN02578, hydrolase	NA|201aa|up_6|NC_019779.1_2080656_2081259_-	PRK02726, PRK02726, molybdenum cofactor guanylyltransferase	NA|195aa|up_5|NC_019779.1_2081354_2081939_+	pfam05685, Uma2, Putative restriction endonuclease	cas3|730aa|up_4|NC_019779.1_2082045_2084235_+	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc	NA|213aa|up_3|NC_019779.1_2084806_2085445_+	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas8u1|696aa|up_2|NC_019779.1_2085660_2087748_+	TIGR04113, hypothetical_protein_AaLAA1DRAFT_1703, CRISPR-associated protein Csx17, subtype Dpsyc	csb1gr7|343aa|up_1|NC_019779.1_2087734_2088763_+	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053)	csb2gr5|479aa|up_0|NC_019779.1_2088766_2090203_+	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system	NA|74aa|down_0|NC_019779.1_2094241_2094463_+	NA	NA|100aa|down_1|NC_019779.1_2094760_2095060_+	NA	NA|767aa|down_2|NC_019779.1_2095113_2097414_+	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB	NA|112aa|down_3|NC_019779.1_2097410_2097746_-	NA	NA|270aa|down_4|NC_019779.1_2097863_2098673_-	COG1117, PstB, ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|639aa|down_5|NC_019779.1_2098806_2100723_-	COG0573, PstC, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism]	NA|132aa|down_6|NC_019779.1_2101025_2101421_+	PRK02710, PRK02710, plastocyanin; Provisional	NA|129aa|down_7|NC_019779.1_2101857_2102244_+	PRK02710, PRK02710, plastocyanin; Provisional	NA|301aa|down_8|NC_019779.1_2102383_2103286_-	cd09993, HDAC_classIV, Histone deacetylase class IV also known as histone deacetylase 11	NA|367aa|down_9|NC_019779.1_2103362_2104463_+	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein
GCF_000317635.1_ASM31763v1	NC_019779	Halothece sp. PCC 7418, complete sequence	11	2463322-2463436	11	CRISPRCasFinder	no		cas14k,Cas14c_CAS-V-F,c2c10_CAS-V-U3,c2c9_V-U4,Cas9_archaeal,cas3,Cas14u_CAS-V,RT,cas14j,cas10,csm3gr7,csx10gr5,csm2gr11,csm6,PD-DExK,csx19,cas6,cas4,cas1,cas2,csc1gr5,csc2gr7,cas10d,WYL,csa3,csx18,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,c2c5_V-U5,DinG,DEDDh,cas8u1,csb1gr7,csb2gr5	Orphan	CAATCTTCATCCTGAGCCAGAGATTGGAGAGTTTCTA	37	0	0	NA	NA	NA	1	1	Orphan	cas14k,Cas14c_CAS-V-F,c2c10_CAS-V-U3,c2c9_V-U4,Cas9_archaeal,cas3,Cas14u_CAS-V,RT,cas14j,cas10,csm3gr7,csx10gr5,csm2gr11,csm6,PD-DExK,csx19,cas6,cas4,cas1,cas2,csc1gr5,csc2gr7,cas10d,WYL,csa3,csx18,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,c2c5_V-U5,DinG,DEDDh,cas8u1,csb1gr7,csb2gr5	NA|89aa|up_6|NC_019779.1_2459165_2459432_-,NA|79aa|up_2|NC_019779.1_2462201_2462438_-,NA|80aa|up_1|NC_019779.1_2462443_2462683_-,NA|62aa|up_0|NC_019779.1_2462774_2462960_+,NA|79aa|down_8|NC_019779.1_2469928_2470165_-	NA|134aa|up_9|NC_019779.1_2456034_2456436_+	sd00006, TPR, Tetratricopeptide repeat	NA|211aa|up_8|NC_019779.1_2456437_2457070_-	PRK00698, tmk, thymidylate kinase; Validated	NA|544aa|up_7|NC_019779.1_2457196_2458828_-	cd03085, PGM1, Phosphoglucomutase 1 (PGM1) catalyzes the bidirectional interconversion of glucose-1-phosphate (G-1-P) and glucose-6-phosphate (G-6-P) via a glucose 1,6-diphosphate intermediate, an important metabolic step in prokaryotes and eukaryotes	NA|89aa|up_6|NC_019779.1_2459165_2459432_-	NA	NA|364aa|up_5|NC_019779.1_2459704_2460796_+	pfam13808, DDE_Tnp_1_assoc, DDE_Tnp_1-associated	NA|95aa|up_4|NC_019779.1_2461476_2461761_+	pfam14076, DUF4258, Domain of unknown function (DUF4258)	NA|87aa|up_3|NC_019779.1_2461757_2462018_+	pfam10049, DUF2283, Protein of unknown function (DUF2283)	NA|79aa|up_2|NC_019779.1_2462201_2462438_-	NA	NA|80aa|up_1|NC_019779.1_2462443_2462683_-	NA	NA|62aa|up_0|NC_019779.1_2462774_2462960_+	NA	NA|115aa|down_0|NC_019779.1_2464955_2465300_-	pfam08872, KGK, KGK domain	NA|125aa|down_1|NC_019779.1_2465303_2465678_-	pfam06868, DUF1257, Protein of unknown function (DUF1257)	NA|516aa|down_2|NC_019779.1_2465702_2467250_-	CHL00195, ycf46, Ycf46; Provisional	NA|74aa|down_3|NC_019779.1_2467494_2467716_+	pfam11211, DUF2997, Protein of unknown function (DUF2997)	NA|181aa|down_4|NC_019779.1_2467712_2468255_+	cd00446, GrpE, nucleotide exchange factor GrpE	NA|73aa|down_5|NC_019779.1_2468479_2468698_+	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General    function prediction only]	NA|209aa|down_6|NC_019779.1_2468745_2469372_+	pfam05685, Uma2, Putative restriction endonuclease	NA|115aa|down_7|NC_019779.1_2469587_2469932_-	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning]	NA|79aa|down_8|NC_019779.1_2469928_2470165_-	NA	NA|335aa|down_9|NC_019779.1_2470213_2471218_-	COG1262, COG1262, Uncharacterized conserved protein [Function unknown]
GCF_000317635.1_ASM31763v1	NC_019779	Halothece sp. PCC 7418, complete sequence	12	3600915-3601015	12	CRISPRCasFinder	no	c2c9_V-U4,cas14j	cas14k,Cas14c_CAS-V-F,c2c10_CAS-V-U3,c2c9_V-U4,Cas9_archaeal,cas3,Cas14u_CAS-V,RT,cas14j,cas10,csm3gr7,csx10gr5,csm2gr11,csm6,PD-DExK,csx19,cas6,cas4,cas1,cas2,csc1gr5,csc2gr7,cas10d,WYL,csa3,csx18,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,c2c5_V-U5,DinG,DEDDh,cas8u1,csb1gr7,csb2gr5	Unclear	GAAAACTGGGAAATTCCTGATTTTGA	26	0	0	NA	NA	NA	1	1	TypeV	cas14k,Cas14c_CAS-V-F,c2c10_CAS-V-U3,c2c9_V-U4,Cas9_archaeal,cas3,Cas14u_CAS-V,RT,cas14j,cas10,csm3gr7,csx10gr5,csm2gr11,csm6,PD-DExK,csx19,cas6,cas4,cas1,cas2,csc1gr5,csc2gr7,cas10d,WYL,csa3,csx18,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx1,c2c5_V-U5,DinG,DEDDh,cas8u1,csb1gr7,csb2gr5	NA,NA|95aa|down_3|NC_019779.1_3609539_3609824_+	NA|146aa|up_9|NC_019779.1_3590475_3590913_-	cd14503, PTP-bact, bacterial tyrosine-protein phosphataseS similar to Neisseria NMA1982	NA|405aa|up_8|NC_019779.1_3591132_3592347_+	cd17602, REC_PatA-like, phosphoacceptor receiver (REC) domain of PatA and similar domains	NA|260aa|up_7|NC_019779.1_3592354_3593134_-	cd07712, MBLAC2-like_MBL-fold, uncharacterized human metallo-beta-lactamase domain-containing protein 2 and related proteins; MBL-fold metallo hydrolase domain	NA|344aa|up_6|NC_019779.1_3593287_3594319_+	cd13563, PBP2_SsuA_like_6, Putative substrate binding domain of sulfonate binding protein-like, a member of the type 2 periplasmic binding protein fold	NA|278aa|up_5|NC_019779.1_3594371_3595205_+	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]	NA|198aa|up_4|NC_019779.1_3595253_3595847_+	cd00431, cysteine_hydrolases, Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle	NA|266aa|up_3|NC_019779.1_3595858_3596656_+	cd03293, ABC_NrtD_SsuB_transporters, ATP-binding cassette domain of the nitrate and sulfonate transporters	NA|121aa|up_2|NC_019779.1_3596781_3597144_+	cd17538, REC_D1_PleD-like, first (D1) phosphoacceptor receiver (REC) domain of response regulator PleD and similar domains	NA|183aa|up_1|NC_019779.1_3597148_3597697_+	COG0835, CheW, Chemotaxis signal transduction protein [Cell motility and secretion / Signal transduction mechanisms]	NA|803aa|up_0|NC_019779.1_3597716_3600125_+	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)	c2c9_V-U4|362aa|down_0|NC_019779.1_3603259_3604345_-	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|1271aa|down_1|NC_019779.1_3604941_3608754_-	PRK05989, cobN, cobaltochelatase subunit CobN; Reviewed	NA|194aa|down_2|NC_019779.1_3608874_3609456_+	sd00006, TPR, Tetratricopeptide repeat	NA|95aa|down_3|NC_019779.1_3609539_3609824_+	NA	NA|287aa|down_4|NC_019779.1_3610081_3610942_-	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|621aa|down_5|NC_019779.1_3611092_3612955_-	cd01920, cyclophilin_EcCYP_like, cyclophilin_EcCYP_like: cyclophilin-type A-like peptidylprolyl cis- trans isomerase (PPIase) domain similar to the cytosolic E	NA|133aa|down_6|NC_019779.1_3613091_3613490_+	TIGR00004, RutC_family_protein, reactive intermediate/imine deaminase	NA|272aa|down_7|NC_019779.1_3613866_3614682_-	COG0411, LivG, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]	NA|370aa|down_8|NC_019779.1_3614671_3615781_-	COG4177, LivM, ABC-type branched-chain amino acid transport system, permease component [Amino acid transport and metabolism]	cas14j|422aa|down_9|NC_019779.1_3615972_3617238_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
