assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000313175.2_ASM31317v2	NZ_CP006694	Leptospira santarosai serovar Shermani str. LT 821 chromosome I, complete sequence	1	727419-727996	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	WYL,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,csa3,RT,DinG,Cas9_archaeal,cas6,cas8b3	Type I-E	CGGTTCAACCCCACGCATGTGGGGAAAAG,CGGTTCAACCCCACGCATGTGGGGAAAAGN,GGTTCAACCCCACGCATGTGGGGAAAAG	29,30,28	0	0	NA	NA	I-E,II-B:I-E,II-B:I-E,II-B	9,9,9	9	TypeI-E	WYL,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,csa3,RT,DinG,Cas9_archaeal,cas6,cas8b3	NA|132aa|up_5|NZ_CP006694.1_723290_723686_+,NA|74aa|up_4|NZ_CP006694.1_723682_723904_+,NA|84aa|down_3|NZ_CP006694.1_730338_730590_-,NA|77aa|down_9|NZ_CP006694.1_737441_737672_-	NA|133aa|up_9|NZ_CP006694.1_718417_718816_+	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed	NA|963aa|up_8|NZ_CP006694.1_718903_721792_+	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed	NA|164aa|up_7|NZ_CP006694.1_721788_722280_+	cd11740, YajQ_like, Proteins similar to Escherichia coli YajQ	NA|185aa|up_6|NZ_CP006694.1_722673_723228_+	cd06260, DUF820, Domain of unknown function (DUF820)	NA|132aa|up_5|NZ_CP006694.1_723290_723686_+	NA	NA|74aa|up_4|NZ_CP006694.1_723682_723904_+	NA	NA|300aa|up_3|NZ_CP006694.1_723979_724879_+	PRK12324, PRK12324, decaprenyl-phosphate phosphoribosyltransferase	NA|287aa|up_2|NZ_CP006694.1_725091_725952_+	PRK09328, PRK09328, N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional	NA|131aa|up_1|NZ_CP006694.1_726503_726896_-	COG3654, Doc, Prophage maintenance system killer protein [General function prediction only]	NA|80aa|up_0|NZ_CP006694.1_726892_727132_-	TIGR02609, hypothetical_protein_XAC1195, putative addiction module antidote	cas2|137aa|down_0|NZ_CP006694.1_728037_728448_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|295aa|down_1|NZ_CP006694.1_728380_729265_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|267aa|down_2|NZ_CP006694.1_729485_730286_-	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	NA|84aa|down_3|NZ_CP006694.1_730338_730590_-	NA	cas5|247aa|down_4|NZ_CP006694.1_730573_731314_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|358aa|down_5|NZ_CP006694.1_731314_732388_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|179aa|down_6|NZ_CP006694.1_732384_732921_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|534aa|down_7|NZ_CP006694.1_732926_734528_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cas3|933aa|down_8|NZ_CP006694.1_734524_737323_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|77aa|down_9|NZ_CP006694.1_737441_737672_-	NA
GCF_000313175.2_ASM31317v2	NZ_CP006694	Leptospira santarosai serovar Shermani str. LT 821 chromosome I, complete sequence	2	843353-843566	2,2,2	CRT,CRISPRCasFinder,PILER-CR	no		WYL,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,csa3,RT,DinG,Cas9_archaeal,cas6,cas8b3	Orphan	ACGGTTCAACCCCACGCATGTGGGGAAAAG,CGGTTCAACCCCACGCATGTGGGGAAAAG,CGGTTCAACCCCACGCATGTGGGGAAAAGG	30,29,30	0	0	NA	NA	I-E,II-B:I-E,II-B:I-E,II-B	3,3,2	3	Orphan	WYL,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,csa3,RT,DinG,Cas9_archaeal,cas6,cas8b3	NA|49aa|up_5|NZ_CP006694.1_836656_836803_+,NA|217aa|up_3|NZ_CP006694.1_838960_839611_+,NA|724aa|up_2|NZ_CP006694.1_839667_841839_+,NA|135aa|up_1|NZ_CP006694.1_841808_842213_+,NA|74aa|down_0|NZ_CP006694.1_844211_844433_-,NA|657aa|down_1|NZ_CP006694.1_844836_846807_-,NA|998aa|down_4|NZ_CP006694.1_848379_851373_+,NA|203aa|down_5|NZ_CP006694.1_851386_851995_+	NA|692aa|up_9|NZ_CP006694.1_829462_831538_+	COG1331, COG1331, Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]	NA|865aa|up_8|NZ_CP006694.1_831952_834547_-	TIGR02412, Aminopeptidase_N, aminopeptidase N, Streptomyces lividans type	NA|419aa|up_7|NZ_CP006694.1_834729_835986_-	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|193aa|up_6|NZ_CP006694.1_835987_836566_-	cd03424, ADPRase_NUDT5, ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate	NA|49aa|up_5|NZ_CP006694.1_836656_836803_+	NA	NA|675aa|up_4|NZ_CP006694.1_836933_838958_+	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA	NA|217aa|up_3|NZ_CP006694.1_838960_839611_+	NA	NA|724aa|up_2|NZ_CP006694.1_839667_841839_+	NA	NA|135aa|up_1|NZ_CP006694.1_841808_842213_+	NA	NA|165aa|up_0|NZ_CP006694.1_842409_842904_+	cd08901, SRPBCC_CalC_Aha1-like_8, Putative hydrophobic ligand-binding SRPBCC domain of an uncharacterized subgroup of CalC- and Aha1-like proteins	NA|74aa|down_0|NZ_CP006694.1_844211_844433_-	NA	NA|657aa|down_1|NZ_CP006694.1_844836_846807_-	NA	NA|331aa|down_2|NZ_CP006694.1_846841_847834_-	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1	NA|114aa|down_3|NZ_CP006694.1_848023_848365_+	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation	NA|998aa|down_4|NZ_CP006694.1_848379_851373_+	NA	NA|203aa|down_5|NZ_CP006694.1_851386_851995_+	NA	NA|2591aa|down_6|NZ_CP006694.1_851998_859771_+	TIGR02800, Protein_TolB, tol-pal system beta propeller repeat protein TolB	NA|368aa|down_7|NZ_CP006694.1_859877_860981_-	pfam10023, Aminopep, Putative aminopeptidase	NA|369aa|down_8|NZ_CP006694.1_860979_862086_+	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family	NA|435aa|down_9|NZ_CP006694.1_862122_863427_+	PRK06855, PRK06855, pyridoxal phosphate-dependent aminotransferase
GCF_000313175.2_ASM31317v2	NZ_CP006694	Leptospira santarosai serovar Shermani str. LT 821 chromosome I, complete sequence	3	867448-867608	3	CRISPRCasFinder	no		WYL,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,csa3,RT,DinG,Cas9_archaeal,cas6,cas8b3	Orphan	AACAAGTATGTTTGTAAATTTTATAACCACTAGTTTCTAAAAACTAACCACTT	53	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,csa3,RT,DinG,Cas9_archaeal,cas6,cas8b3	NA|998aa|up_8|NZ_CP006694.1_848379_851373_+,NA|203aa|up_7|NZ_CP006694.1_851386_851995_+,NA|70aa|down_1|NZ_CP006694.1_868750_868960_-,NA|270aa|down_4|NZ_CP006694.1_872138_872948_+,NA|581aa|down_6|NZ_CP006694.1_874266_876009_-	NA|114aa|up_9|NZ_CP006694.1_848023_848365_+	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation	NA|998aa|up_8|NZ_CP006694.1_848379_851373_+	NA	NA|203aa|up_7|NZ_CP006694.1_851386_851995_+	NA	NA|2591aa|up_6|NZ_CP006694.1_851998_859771_+	TIGR02800, Protein_TolB, tol-pal system beta propeller repeat protein TolB	NA|368aa|up_5|NZ_CP006694.1_859877_860981_-	pfam10023, Aminopep, Putative aminopeptidase	NA|369aa|up_4|NZ_CP006694.1_860979_862086_+	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family	NA|435aa|up_3|NZ_CP006694.1_862122_863427_+	PRK06855, PRK06855, pyridoxal phosphate-dependent aminotransferase	NA|253aa|up_2|NZ_CP006694.1_863453_864212_+	PRK00865, PRK00865, glutamate racemase; Provisional	NA|199aa|up_1|NZ_CP006694.1_865384_865981_+	pfam04773, FecR, FecR protein	NA|345aa|up_0|NZ_CP006694.1_866100_867135_+	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional	NA|335aa|down_0|NZ_CP006694.1_867739_868744_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|70aa|down_1|NZ_CP006694.1_868750_868960_-	NA	NA|476aa|down_2|NZ_CP006694.1_869700_871128_-	PRK05826, PRK05826, pyruvate kinase; Provisional	NA|271aa|down_3|NZ_CP006694.1_871324_872137_+	cd09993, HDAC_classIV, Histone deacetylase class IV also known as histone deacetylase 11	NA|270aa|down_4|NZ_CP006694.1_872138_872948_+	NA	NA|370aa|down_5|NZ_CP006694.1_872949_874059_+	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE)	NA|581aa|down_6|NZ_CP006694.1_874266_876009_-	NA	NA|162aa|down_7|NZ_CP006694.1_876083_876569_-	NF033171, lipo_LIC11139, putative lipoprotein	NA|648aa|down_8|NZ_CP006694.1_876635_878579_-	cd14791, GH36, glycosyl hydrolase family 36 (GH36)	NA|213aa|down_9|NZ_CP006694.1_878702_879341_+	cd06142, RNaseD_exo, DEDDy 3'-5' exonuclease domain of Ribonuclease D and similar proteins
GCF_000313175.2_ASM31317v2	NZ_CP006694	Leptospira santarosai serovar Shermani str. LT 821 chromosome I, complete sequence	4	2207749-2207906	4	CRISPRCasFinder	no		WYL,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,csa3,RT,DinG,Cas9_archaeal,cas6,cas8b3	Orphan	TGAGTTGGCTAGGGGTTAGAAGGGTCAACAAGTATGTTTGTAAATTTTAT	50	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,csa3,RT,DinG,Cas9_archaeal,cas6,cas8b3	NA|85aa|up_2|NZ_CP006694.1_2204869_2205124_-,NA|62aa|down_8|NZ_CP006694.1_2216164_2216350_-	NA|443aa|up_9|NZ_CP006694.1_2199173_2200502_-	TIGR00665, DnaB, replicative DNA helicase	NA|150aa|up_8|NZ_CP006694.1_2200518_2200968_-	PRK00137, rplI, 50S ribosomal protein L9; Reviewed	NA|104aa|up_7|NZ_CP006694.1_2200977_2201289_-	PRK00391, rpsR, 30S ribosomal protein S18; Reviewed	NA|146aa|up_6|NZ_CP006694.1_2201301_2201739_-	TIGR00621, Single-stranded_DNA-binding_protein, single stranded DNA-binding protein (ssb)	NA|92aa|up_5|NZ_CP006694.1_2201731_2202007_-	PRK00453, rpsF, 30S ribosomal protein S6; Reviewed	NA|483aa|up_4|NZ_CP006694.1_2202072_2203521_-	smart00854, PGA_cap, Bacterial capsule synthesis protein PGA_cap	NA|143aa|up_3|NZ_CP006694.1_2204439_2204868_-	TIGR00028, Hypothetical_protein_Rv2872/MT2939/Mb2897	NA|85aa|up_2|NZ_CP006694.1_2204869_2205124_-	NA	NA|465aa|up_1|NZ_CP006694.1_2205312_2206707_-	TIGR00785, Uncharacterized_transporter_HI_0020, anion transporter	NA|283aa|up_0|NZ_CP006694.1_2206745_2207594_-	COG1216, COG1216, Predicted glycosyltransferases [General function prediction only]	NA|140aa|down_0|NZ_CP006694.1_2207955_2208375_+	pfam01527, HTH_Tnp_1, Transposase	NA|270aa|down_1|NZ_CP006694.1_2208383_2209193_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|308aa|down_2|NZ_CP006694.1_2209741_2210665_-	cd02526, GT2_RfbF_like, RfbF is a putative dTDP-rhamnosyl transferase	NA|323aa|down_3|NZ_CP006694.1_2210670_2211639_-	cd04186, GT_2_like_c, Subfamily of Glycosyltransferase Family GT2 of unknown function	NA|295aa|down_4|NZ_CP006694.1_2212733_2213618_-	TIGR01207, Glucose-1-phosphate_thymidylyltransferase_1, glucose-1-phosphate thymidylyltransferase, short form	NA|350aa|down_5|NZ_CP006694.1_2213618_2214668_-	COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]	NA|307aa|down_6|NZ_CP006694.1_2214664_2215585_-	pfam04321, RmlD_sub_bind, RmlD substrate binding domain	NA|187aa|down_7|NZ_CP006694.1_2215588_2216149_-	pfam00908, dTDP_sugar_isom, dTDP-4-dehydrorhamnose 3,5-epimerase	NA|62aa|down_8|NZ_CP006694.1_2216164_2216350_-	NA	NA|587aa|down_9|NZ_CP006694.1_2216456_2218217_-	cd04184, GT2_RfbC_Mx_like, Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis
GCF_000313175.2_ASM31317v2	NZ_CP006694	Leptospira santarosai serovar Shermani str. LT 821 chromosome I, complete sequence	5	2264919-2265027	5	CRISPRCasFinder	no		WYL,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,csa3,RT,DinG,Cas9_archaeal,cas6,cas8b3	Orphan	GGGAGTGAGATACTGAGTTCAGGAAGCGTTTCGCTGAGTT	40	1	2	2264959-2264987|2264959-2264987	NZ_CP006694.1_521153-521181|NZ_CP006694.1_3498302-3498274	NA	1	1	Orphan	WYL,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,csa3,RT,DinG,Cas9_archaeal,cas6,cas8b3	NA,NA|105aa|down_7|NZ_CP006694.1_2270934_2271249_-	NA|239aa|up_9|NZ_CP006694.1_2251134_2251851_-	cd08653, FMT_core_like_3, Formyl transferase catalytic core domain found in a group of proteins with unknown functions	NA|232aa|up_8|NZ_CP006694.1_2251847_2252543_-	COG2089, SpsE, Sialic acid synthase [Cell envelope biogenesis, outer membrane]	NA|225aa|up_7|NZ_CP006694.1_2252559_2253234_-	cd00761, Glyco_tranf_GTA_type, Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold	NA|588aa|up_6|NZ_CP006694.1_2253211_2254975_-	cd02513, CMP-NeuAc_Synthase, CMP-NeuAc_Synthase activates N-acetylneuraminic acid by adding CMP moiety	NA|428aa|up_5|NZ_CP006694.1_2255035_2256319_-	PRK15182, PRK15182, Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB	NA|343aa|up_4|NZ_CP006694.1_2256302_2257331_-	cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs	NA|593aa|up_3|NZ_CP006694.1_2257642_2259421_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|319aa|up_2|NZ_CP006694.1_2261690_2262647_-	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs	NA|107aa|up_1|NZ_CP006694.1_2262652_2262973_-	TIGR04176, hypothetical_protein, EPS-associated transcriptional regulator, MarR family	NA|486aa|up_0|NZ_CP006694.1_2263423_2264881_+	cd05819, NHL, NHL repeat unit of beta-propeller proteins	NA|382aa|down_0|NZ_CP006694.1_2265141_2266287_+	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|132aa|down_1|NZ_CP006694.1_2266858_2267254_+	COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]	NA|135aa|down_2|NZ_CP006694.1_2267276_2267681_+	COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]	NA|119aa|down_3|NZ_CP006694.1_2267945_2268302_+	pfam04342, DMT_6, Putative member of DMT superfamily (DUF486)	NA|259aa|down_4|NZ_CP006694.1_2268351_2269128_-	pfam10127, Nuc-transf, Predicted nucleotidyltransferase	NA|203aa|down_5|NZ_CP006694.1_2269252_2269861_-	cd02968, SCO, SCO (an acronym for Synthesis of Cytochrome c Oxidase) family; composed of proteins similar to Sco1, a membrane-anchored protein possessing a soluble domain with a TRX fold	NA|334aa|down_6|NZ_CP006694.1_2269926_2270928_-	cd11024, CuRO_1_2DMCO_NIR_like, The cupredoxin domain 1 of a two-domain laccase related to nitrite reductase	NA|105aa|down_7|NZ_CP006694.1_2270934_2271249_-	NA	NA|671aa|down_8|NZ_CP006694.1_2271288_2273301_-	TIGR03805, beta_helix_1, parallel beta-helix repeat-containing protein	NA|422aa|down_9|NZ_CP006694.1_2273608_2274874_+	COG3920, COG3920, Signal transduction histidine kinase [Signal transduction mechanisms]
GCF_000313175.2_ASM31317v2	NZ_CP006694	Leptospira santarosai serovar Shermani str. LT 821 chromosome I, complete sequence	6	2688170-2688276	6	CRISPRCasFinder	no		WYL,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,csa3,RT,DinG,Cas9_archaeal,cas6,cas8b3	Orphan	TGTGGGAGTTCCCACAATTTCGGCTTTCGGATGCT	35	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,csa3,RT,DinG,Cas9_archaeal,cas6,cas8b3	NA|62aa|up_9|NZ_CP006694.1_2674012_2674198_+,NA|236aa|up_8|NZ_CP006694.1_2674197_2674905_+,NA|76aa|up_7|NZ_CP006694.1_2674901_2675129_+,NA|91aa|up_5|NZ_CP006694.1_2675951_2676224_+,NA|177aa|up_2|NZ_CP006694.1_2677601_2678132_+,NA|132aa|up_0|NZ_CP006694.1_2680714_2681110_-,NA|420aa|down_0|NZ_CP006694.1_2688692_2689952_-,NA|133aa|down_7|NZ_CP006694.1_2696561_2696960_-	NA|62aa|up_9|NZ_CP006694.1_2674012_2674198_+	NA	NA|236aa|up_8|NZ_CP006694.1_2674197_2674905_+	NA	NA|76aa|up_7|NZ_CP006694.1_2674901_2675129_+	NA	NA|278aa|up_6|NZ_CP006694.1_2675125_2675959_+	pfam01555, N6_N4_Mtase, DNA methylase	NA|91aa|up_5|NZ_CP006694.1_2675951_2676224_+	NA	NA|142aa|up_4|NZ_CP006694.1_2676220_2676646_+	cd06552, ASCH_yqfb_like, ASC-1 homology domain, subfamily similar to Escherichia coli Yqfb	NA|246aa|up_3|NZ_CP006694.1_2676662_2677400_+	pfam07505, DUF5131, Protein of unknown function (DUF5131)	NA|177aa|up_2|NZ_CP006694.1_2677601_2678132_+	NA	NA|360aa|up_1|NZ_CP006694.1_2678414_2679494_+	pfam13683, rve_3, Integrase core domain	NA|132aa|up_0|NZ_CP006694.1_2680714_2681110_-	NA	NA|420aa|down_0|NZ_CP006694.1_2688692_2689952_-	NA	NA|304aa|down_1|NZ_CP006694.1_2690249_2691161_+	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|356aa|down_2|NZ_CP006694.1_2691351_2692419_-	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|176aa|down_3|NZ_CP006694.1_2692411_2692939_-	cd00038, CAP_ED, effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor	NA|183aa|down_4|NZ_CP006694.1_2692943_2693492_-	PRK14783, PRK14783, lipoprotein signal peptidase; Provisional	NA|571aa|down_5|NZ_CP006694.1_2693488_2695201_-	COG0661, AarF, Predicted unusual protein kinase [General function prediction only]	NA|451aa|down_6|NZ_CP006694.1_2695212_2696565_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|133aa|down_7|NZ_CP006694.1_2696561_2696960_-	NA	NA|495aa|down_8|NZ_CP006694.1_2697017_2698502_-	PRK06529, PRK06529, amidase; Provisional	NA|318aa|down_9|NZ_CP006694.1_2698662_2699616_+	PHA03095, PHA03095, ankyrin-like protein; Provisional
GCF_000313175.2_ASM31317v2	NZ_CP006694	Leptospira santarosai serovar Shermani str. LT 821 chromosome I, complete sequence	7	2740489-2740645	7	CRISPRCasFinder	no		WYL,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,csa3,RT,DinG,Cas9_archaeal,cas6,cas8b3	Orphan	TCCTACTTTTTCTCAGAGAAACACCCTTCTAACAACTAATAAACTAATTACTAG	54	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,csa3,RT,DinG,Cas9_archaeal,cas6,cas8b3	NA|204aa|up_7|NZ_CP006694.1_2727576_2728188_-,NA|106aa|up_4|NZ_CP006694.1_2729659_2729977_-,NA|62aa|up_3|NZ_CP006694.1_2730056_2730242_-,NA|297aa|up_1|NZ_CP006694.1_2738136_2739027_+,NA|147aa|down_6|NZ_CP006694.1_2744882_2745323_-	NA|336aa|up_9|NZ_CP006694.1_2725551_2726559_-	pfam17761, DUF1016_N, DUF1016 N-terminal domain	NA|302aa|up_8|NZ_CP006694.1_2726654_2727560_-	pfam16927, HisKA_7TM, N-terminal 7TM region of histidine kinase	NA|204aa|up_7|NZ_CP006694.1_2727576_2728188_-	NA	NA|131aa|up_6|NZ_CP006694.1_2728530_2728923_-	pfam13560, HTH_31, Helix-turn-helix domain	NA|185aa|up_5|NZ_CP006694.1_2729037_2729592_+	pfam12833, HTH_18, Helix-turn-helix domain	NA|106aa|up_4|NZ_CP006694.1_2729659_2729977_-	NA	NA|62aa|up_3|NZ_CP006694.1_2730056_2730242_-	NA	NA|2366aa|up_2|NZ_CP006694.1_2730418_2737516_-	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain	NA|297aa|up_1|NZ_CP006694.1_2738136_2739027_+	NA	NA|466aa|up_0|NZ_CP006694.1_2739023_2740421_+	sd00038, Kelch, Kelch repeat	NA|215aa|down_0|NZ_CP006694.1_2740710_2741355_+	pfam14559, TPR_19, Tetratricopeptide repeat	NA|94aa|down_1|NZ_CP006694.1_2741643_2741925_+	COG3549, HigB, Plasmid maintenance system killer protein [General function prediction only]	NA|99aa|down_2|NZ_CP006694.1_2741940_2742237_+	TIGR02607, Virulence-associated_protein_I, addiction module antidote protein, HigA family	NA|133aa|down_3|NZ_CP006694.1_2742615_2743014_-	cd18745, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily	NA|77aa|down_4|NZ_CP006694.1_2743013_2743244_-	COG4456, VagC, Virulence-associated protein and related proteins [Function unknown]	NA|382aa|down_5|NZ_CP006694.1_2743613_2744759_+	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|147aa|down_6|NZ_CP006694.1_2744882_2745323_-	NA	NA|915aa|down_7|NZ_CP006694.1_2745367_2748112_-	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed	NA|218aa|down_8|NZ_CP006694.1_2748119_2748773_-	sd00033, LRR_RI, leucine-rich repeats, ribonuclease inhibitor (RI)-like subfamily	NA|746aa|down_9|NZ_CP006694.1_2748790_2751028_-	PRK01213, PRK01213, phosphoribosylformylglycinamidine synthase subunit PurL
GCF_000313175.2_ASM31317v2	NZ_CP006694	Leptospira santarosai serovar Shermani str. LT 821 chromosome I, complete sequence	8	2904933-2905034	8	CRISPRCasFinder	no		WYL,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,csa3,RT,DinG,Cas9_archaeal,cas6,cas8b3	Orphan	AAAAAAGTACTTGGATAATCAACCTGCGAAACGACC	36	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,csa3,RT,DinG,Cas9_archaeal,cas6,cas8b3	NA|83aa|up_8|NZ_CP006694.1_2894683_2894932_+,NA|175aa|up_6|NZ_CP006694.1_2896568_2897093_+,NA|420aa|up_5|NZ_CP006694.1_2897387_2898647_+,NA|129aa|up_1|NZ_CP006694.1_2902746_2903133_+,NA|600aa|down_1|NZ_CP006694.1_2906059_2907859_+,NA|112aa|down_5|NZ_CP006694.1_2912687_2913023_-,NA|51aa|down_8|NZ_CP006694.1_2917567_2917720_+,NA|140aa|down_9|NZ_CP006694.1_2917889_2918309_-	NA|158aa|up_9|NZ_CP006694.1_2894207_2894681_-	pfam13646, HEAT_2, HEAT repeats	NA|83aa|up_8|NZ_CP006694.1_2894683_2894932_+	NA	NA|387aa|up_7|NZ_CP006694.1_2894865_2896026_+	pfam03739, YjgP_YjgQ, Predicted permease YjgP/YjgQ family	NA|175aa|up_6|NZ_CP006694.1_2896568_2897093_+	NA	NA|420aa|up_5|NZ_CP006694.1_2897387_2898647_+	NA	NA|486aa|up_4|NZ_CP006694.1_2898946_2900404_+	cd14955, NHL_like_4, Uncharacterized NHL-repeat domain in bacterial and archaeal proteins	NA|235aa|up_3|NZ_CP006694.1_2900782_2901487_-	pfam01596, Methyltransf_3, O-methyltransferase	NA|395aa|up_2|NZ_CP006694.1_2901483_2902668_-	PTZ00461, PTZ00461, isovaleryl-CoA dehydrogenase; Provisional	NA|129aa|up_1|NZ_CP006694.1_2902746_2903133_+	NA	NA|254aa|up_0|NZ_CP006694.1_2903216_2903978_+	cd01714, ETF_beta, The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases	NA|198aa|down_0|NZ_CP006694.1_2905453_2906047_+	cd16325, LolA, LolA, a periplasmic chaperone	NA|600aa|down_1|NZ_CP006694.1_2906059_2907859_+	NA	NA|323aa|down_2|NZ_CP006694.1_2907855_2908824_+	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed	NA|441aa|down_3|NZ_CP006694.1_2908985_2910308_-	cd08590, PI-PLCc_Rv2075c_like, Catalytic domain of uncharacterized Mycobacterium tuberculosis Rv2075c-like proteins	NA|382aa|down_4|NZ_CP006694.1_2910785_2911931_+	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|112aa|down_5|NZ_CP006694.1_2912687_2913023_-	NA	NA|382aa|down_6|NZ_CP006694.1_2914129_2915275_-	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|438aa|down_7|NZ_CP006694.1_2915594_2916908_-	cd02874, GH18_CFLE_spore_hydrolase, Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in  bacterial endospore germination	NA|51aa|down_8|NZ_CP006694.1_2917567_2917720_+	NA	NA|140aa|down_9|NZ_CP006694.1_2917889_2918309_-	NA
GCF_000313175.2_ASM31317v2	NZ_CP006694	Leptospira santarosai serovar Shermani str. LT 821 chromosome I, complete sequence	9	3073836-3074167	3,9,3	PILER-CR,CRISPRCasFinder,CRT	no		WYL,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,csa3,RT,DinG,Cas9_archaeal,cas6,cas8b3	Orphan	CGGTTCAACCCCACGCATGTGGGGAAAAG,CTTTTCCCCACATGCGTGGGGTTGAACCG,CTTTTCCCCACATGCGTGGGGTTGAACC	29,29,28	0	0	NA	NA	I-E,II-B:I-E,II-B:I-E,II-B	4,5,5	5	Orphan	WYL,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,csa3,RT,DinG,Cas9_archaeal,cas6,cas8b3	NA|72aa|up_8|NZ_CP006694.1_3060062_3060278_-,NA|91aa|up_6|NZ_CP006694.1_3061967_3062240_-,NA|118aa|down_5|NZ_CP006694.1_3080474_3080828_-,NA|225aa|down_6|NZ_CP006694.1_3081475_3082150_-,NA|434aa|down_9|NZ_CP006694.1_3084042_3085344_+	NA|509aa|up_9|NZ_CP006694.1_3058501_3060028_-	pfam08668, HDOD, HDOD domain	NA|72aa|up_8|NZ_CP006694.1_3060062_3060278_-	NA	NA|494aa|up_7|NZ_CP006694.1_3060514_3061996_+	cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like	NA|91aa|up_6|NZ_CP006694.1_3061967_3062240_-	NA	NA|161aa|up_5|NZ_CP006694.1_3062522_3063005_-	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]	NA|440aa|up_4|NZ_CP006694.1_3064943_3066263_-	NF033189, internalin_A, class 1 internalin InlA	NA|73aa|up_3|NZ_CP006694.1_3066785_3067004_-	pfam13592, HTH_33, Winged helix-turn helix	NA|375aa|up_2|NZ_CP006694.1_3067440_3068565_-	cd00616, AHBA_syn, 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)	NA|826aa|up_1|NZ_CP006694.1_3068639_3071117_-	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones]	NA|472aa|up_0|NZ_CP006694.1_3071543_3072959_+	pfam07603, DUF1566, Protein of unknown function (DUF1566)	NA|396aa|down_0|NZ_CP006694.1_3074435_3075623_+	pfam01551, Peptidase_M23, Peptidase family M23	NA|141aa|down_1|NZ_CP006694.1_3075947_3076370_+	pfam01124, MAPEG, MAPEG family	NA|239aa|down_2|NZ_CP006694.1_3076616_3077333_+	TIGR02135, Uncharacterized_protein, phosphate transport system regulatory protein PhoU	NA|504aa|down_3|NZ_CP006694.1_3077569_3079081_+	cd07996, WGR_MMR_like, WGR domain of molybdate metabolism regulator and related proteins	NA|270aa|down_4|NZ_CP006694.1_3079435_3080245_-	cd03401, SPFH_prohibitin, Prohibitin family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily	NA|118aa|down_5|NZ_CP006694.1_3080474_3080828_-	NA	NA|225aa|down_6|NZ_CP006694.1_3081475_3082150_-	NA	NA|236aa|down_7|NZ_CP006694.1_3082146_3082854_-	COG0400, COG0400, Predicted esterase [General function prediction only]	NA|256aa|down_8|NZ_CP006694.1_3083013_3083781_+	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs	NA|434aa|down_9|NZ_CP006694.1_3084042_3085344_+	NA
GCF_000313175.2_ASM31317v2	NZ_CP006694	Leptospira santarosai serovar Shermani str. LT 821 chromosome I, complete sequence	10	3120164-3120237	10	CRISPRCasFinder	no		WYL,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,csa3,RT,DinG,Cas9_archaeal,cas6,cas8b3	Orphan	TTTTTTTGAACATGTTCAATTTT	23	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,csa3,RT,DinG,Cas9_archaeal,cas6,cas8b3	NA|194aa|up_7|NZ_CP006694.1_3112403_3112985_-,NA|532aa|up_6|NZ_CP006694.1_3113210_3114806_+,NA|64aa|up_5|NZ_CP006694.1_3115402_3115594_-,NA|226aa|up_2|NZ_CP006694.1_3117101_3117779_-,NA|517aa|down_7|NZ_CP006694.1_3130502_3132053_+	NA|450aa|up_9|NZ_CP006694.1_3109974_3111324_-	PLN02569, PLN02569, threonine synthase	NA|331aa|up_8|NZ_CP006694.1_3111327_3112320_-	cd03408, SPFH_like_u1, Uncharacterized family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily	NA|194aa|up_7|NZ_CP006694.1_3112403_3112985_-	NA	NA|532aa|up_6|NZ_CP006694.1_3113210_3114806_+	NA	NA|64aa|up_5|NZ_CP006694.1_3115402_3115594_-	NA	NA|185aa|up_4|NZ_CP006694.1_3115686_3116241_+	TIGR02227, Inactive_signal_peptidase_IA	NA|198aa|up_3|NZ_CP006694.1_3116417_3117011_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|226aa|up_2|NZ_CP006694.1_3117101_3117779_-	NA	NA|225aa|up_1|NZ_CP006694.1_3117909_3118584_+	COG1360, MotB, Flagellar motor protein [Cell motility and secretion]	NA|119aa|up_0|NZ_CP006694.1_3118614_3118971_-	COG4270, COG4270, Predicted membrane protein [Function unknown]	NA|229aa|down_0|NZ_CP006694.1_3121085_3121772_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|240aa|down_1|NZ_CP006694.1_3121787_3122507_+	TIGR03709, PPK2_rel_1, polyphosphate:nucleotide phosphotransferase, PPK2 family	NA|254aa|down_2|NZ_CP006694.1_3122704_3123466_-	pfam09844, DUF2071, Uncharacterized conserved protein (COG2071)	NA|416aa|down_3|NZ_CP006694.1_3124033_3125281_+	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	NA|181aa|down_4|NZ_CP006694.1_3125791_3126334_+	cd00340, GSH_Peroxidase, Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate	NA|308aa|down_5|NZ_CP006694.1_3126835_3127759_+	cd14727, ChanN-like, ChaN is an iron-regulated, heme-binding protein	NA|903aa|down_6|NZ_CP006694.1_3127804_3130513_+	TIGR02074, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein, 1A family	NA|517aa|down_7|NZ_CP006694.1_3130502_3132053_+	NA	NA|130aa|down_8|NZ_CP006694.1_3132696_3133086_+	COG2322, COG2322, Predicted membrane protein [Function unknown]	NA|275aa|down_9|NZ_CP006694.1_3133138_3133963_+	cd02012, TPP_TK, Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates
GCF_000313175.2_ASM31317v2	NZ_CP006694	Leptospira santarosai serovar Shermani str. LT 821 chromosome I, complete sequence	11	3347622-3347931	4,4,11	CRT,PILER-CR,CRISPRCasFinder	no	cas6,cas3,cas8b3,cas7,cas5,cas2	WYL,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,csa3,RT,DinG,Cas9_archaeal,cas6,cas8b3	Unclear	GATGCCGTAAGGCGTTGAGCACAT,CTGAATATAACTTTGATGCCGTAAGGCGTTGAGCACATGAAAG,CTGAATATAACTTTGATACCGTAAGGCGTTGAGCA	24,43,35	0	0	NA	NA	I-A,I-B,II-B:I-A,I-B,II-B:I-A,I-B,II-B	3,2,3	3	Unclear	WYL,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,csa3,RT,DinG,Cas9_archaeal,cas6,cas8b3	NA|112aa|up_6|NZ_CP006694.1_3340069_3340405_+,NA|340aa|down_2|NZ_CP006694.1_3356678_3357698_+,NA|402aa|down_5|NZ_CP006694.1_3362275_3363481_+,NA|441aa|down_7|NZ_CP006694.1_3364282_3365605_+	NA|1119aa|up_9|NZ_CP006694.1_3333607_3336964_-	COG4913, COG4913, Uncharacterized protein conserved in bacteria [Function unknown]	NA|188aa|up_8|NZ_CP006694.1_3336967_3337531_-	pfam13835, DUF4194, Domain of unknown function (DUF4194)	NA|484aa|up_7|NZ_CP006694.1_3337527_3338979_-	pfam11855, DUF3375, Protein of unknown function (DUF3375)	NA|112aa|up_6|NZ_CP006694.1_3340069_3340405_+	NA	NA|166aa|up_5|NZ_CP006694.1_3340805_3341303_+	cd14498, DSP, dual-specificity phosphatase domain	cas6|204aa|up_4|NZ_CP006694.1_3341520_3342132_+	pfam09559, Cas6, Cas6 Crispr	cas3|759aa|up_3|NZ_CP006694.1_3342131_3344408_+	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3	cas8b3|533aa|up_2|NZ_CP006694.1_3344395_3345994_+	TIGR03485, hypothetical_protein_L8106_30105, CRISPR-associated protein Cas8a1/Csx13, MYXAN subtype	cas7|307aa|up_1|NZ_CP006694.1_3345986_3346907_+	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas5|213aa|up_0|NZ_CP006694.1_3346903_3347542_+	cd09688, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas2|95aa|down_0|NZ_CP006694.1_3349769_3350054_+	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2	NA|345aa|down_1|NZ_CP006694.1_3355535_3356570_-	PRK11815, PRK11815, tRNA dihydrouridine(20/20a) synthase DusA	NA|340aa|down_2|NZ_CP006694.1_3356678_3357698_+	NA	NA|653aa|down_3|NZ_CP006694.1_3357697_3359656_+	PRK01747, mnmC, bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA|622aa|down_4|NZ_CP006694.1_3359788_3361654_+	COG0514, RecQ, Superfamily II DNA helicase [DNA replication, recombination, and repair]	NA|402aa|down_5|NZ_CP006694.1_3362275_3363481_+	NA	NA|175aa|down_6|NZ_CP006694.1_3363755_3364280_+	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|441aa|down_7|NZ_CP006694.1_3364282_3365605_+	NA	NA|321aa|down_8|NZ_CP006694.1_3365601_3366564_+	pfam13505, OMP_b-brl, Outer membrane protein beta-barrel domain	NA|643aa|down_9|NZ_CP006694.1_3366982_3368911_-	TIGR03395, Sphingomyelinase_C, sphingomyelin phosphodiesterase
GCF_000313175.2_ASM31317v2	NZ_CP006694	Leptospira santarosai serovar Shermani str. LT 821 chromosome I, complete sequence	12	3350420-3350672	5,12,5	PILER-CR,CRISPRCasFinder,CRT	no	cas6,cas3,cas8b3,cas7,cas5,cas2	WYL,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,csa3,RT,DinG,Cas9_archaeal,cas6,cas8b3	Unclear	CTGAATATAACTTTGATGCCGTAAGGCGTTGAGCAC,CTGAATATAACTTTGATGCCGTAAGGCGTT,CTGAATATAACTTTGATGCCGTAAGGCGTTGAGCAC	36,30,36	0	0	NA	NA	I-A,I-B,II-B:I-A,I-B,II-B:I-A,I-B,II-B	2,3,3	3	Unclear	WYL,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,csa3,RT,DinG,Cas9_archaeal,cas6,cas8b3	NA|112aa|up_7|NZ_CP006694.1_3340069_3340405_+,NA|340aa|down_1|NZ_CP006694.1_3356678_3357698_+,NA|402aa|down_4|NZ_CP006694.1_3362275_3363481_+,NA|441aa|down_6|NZ_CP006694.1_3364282_3365605_+	NA|188aa|up_9|NZ_CP006694.1_3336967_3337531_-	pfam13835, DUF4194, Domain of unknown function (DUF4194)	NA|484aa|up_8|NZ_CP006694.1_3337527_3338979_-	pfam11855, DUF3375, Protein of unknown function (DUF3375)	NA|112aa|up_7|NZ_CP006694.1_3340069_3340405_+	NA	NA|166aa|up_6|NZ_CP006694.1_3340805_3341303_+	cd14498, DSP, dual-specificity phosphatase domain	cas6|204aa|up_5|NZ_CP006694.1_3341520_3342132_+	pfam09559, Cas6, Cas6 Crispr	cas3|759aa|up_4|NZ_CP006694.1_3342131_3344408_+	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3	cas8b3|533aa|up_3|NZ_CP006694.1_3344395_3345994_+	TIGR03485, hypothetical_protein_L8106_30105, CRISPR-associated protein Cas8a1/Csx13, MYXAN subtype	cas7|307aa|up_2|NZ_CP006694.1_3345986_3346907_+	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas5|213aa|up_1|NZ_CP006694.1_3346903_3347542_+	cd09688, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas2|95aa|up_0|NZ_CP006694.1_3349769_3350054_+	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2	NA|345aa|down_0|NZ_CP006694.1_3355535_3356570_-	PRK11815, PRK11815, tRNA dihydrouridine(20/20a) synthase DusA	NA|340aa|down_1|NZ_CP006694.1_3356678_3357698_+	NA	NA|653aa|down_2|NZ_CP006694.1_3357697_3359656_+	PRK01747, mnmC, bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA|622aa|down_3|NZ_CP006694.1_3359788_3361654_+	COG0514, RecQ, Superfamily II DNA helicase [DNA replication, recombination, and repair]	NA|402aa|down_4|NZ_CP006694.1_3362275_3363481_+	NA	NA|175aa|down_5|NZ_CP006694.1_3363755_3364280_+	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|441aa|down_6|NZ_CP006694.1_3364282_3365605_+	NA	NA|321aa|down_7|NZ_CP006694.1_3365601_3366564_+	pfam13505, OMP_b-brl, Outer membrane protein beta-barrel domain	NA|643aa|down_8|NZ_CP006694.1_3366982_3368911_-	TIGR03395, Sphingomyelinase_C, sphingomyelin phosphodiesterase	NA|283aa|down_9|NZ_CP006694.1_3370191_3371040_-	sd00006, TPR, Tetratricopeptide repeat
GCF_000313175.2_ASM31317v2	NZ_CP006694	Leptospira santarosai serovar Shermani str. LT 821 chromosome I, complete sequence	13	3500443-3500534	13	CRISPRCasFinder	no		WYL,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,csa3,RT,DinG,Cas9_archaeal,cas6,cas8b3	Orphan	AGGAAGCGTTTCGCTGAGTTTCC	23	1	1	3500466-3500511	NZ_CP006694.1_2264893-2264938	NA	1	1	Orphan	WYL,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,csa3,RT,DinG,Cas9_archaeal,cas6,cas8b3	NA,NA|61aa|down_0|NZ_CP006694.1_3501199_3501382_-	NA|354aa|up_9|NZ_CP006694.1_3490421_3491483_+	cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs	NA|220aa|up_8|NZ_CP006694.1_3492045_3492705_+	pfam07600, DUF1564, Protein of unknown function (DUF1564)	NA|276aa|up_7|NZ_CP006694.1_3492704_3493532_+	cd19071, AKR_AKR1-5-like, AKR1/2/3/4/5 family of aldo-keto reductase (AKR) and similar proteins	NA|422aa|up_6|NZ_CP006694.1_3493548_3494814_-	cd02577, PSTD1, Pseudouridine synthase, a subgroup of the TruD family	NA|150aa|up_5|NZ_CP006694.1_3494869_3495319_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|148aa|up_4|NZ_CP006694.1_3495513_3495957_+	COG2259, COG2259, Predicted membrane protein [Function unknown]	NA|580aa|up_3|NZ_CP006694.1_3496036_3497776_-	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]	NA|93aa|up_2|NZ_CP006694.1_3498408_3498687_+	pfam14542, Acetyltransf_CG, GCN5-related N-acetyl-transferase	NA|112aa|up_1|NZ_CP006694.1_3498683_3499019_+	cd07245, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|413aa|up_0|NZ_CP006694.1_3499015_3500254_-	pfam03486, HI0933_like, HI0933-like protein	NA|61aa|down_0|NZ_CP006694.1_3501199_3501382_-	NA	NA|138aa|down_1|NZ_CP006694.1_3501579_3501993_-	PRK14542, PRK14542, nucleoside diphosphate kinase; Provisional	NA|161aa|down_2|NZ_CP006694.1_3502002_3502485_-	PRK00168, coaD, phosphopantetheine adenylyltransferase; Provisional	NA|404aa|down_3|NZ_CP006694.1_3502481_3503693_-	PRK00509, PRK00509, argininosuccinate synthase; Provisional	NA|489aa|down_4|NZ_CP006694.1_3503767_3505234_-	pfam11074, DUF2779, Domain of unknown function(DUF2779)	NA|386aa|down_5|NZ_CP006694.1_3505335_3506493_-	pfam16073, SAT, Starter unit:ACP transacylase in aflatoxin biosynthesis	NA|251aa|down_6|NZ_CP006694.1_3506647_3507400_+	pfam13644, DKNYY, DKNYY family	NA|310aa|down_7|NZ_CP006694.1_3507660_3508590_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|243aa|down_8|NZ_CP006694.1_3508596_3509325_+	TIGR03518, ABC_transporter_permease_protein, gliding motility-associated ABC transporter permease protein GldF	NA|667aa|down_9|NZ_CP006694.1_3509321_3511322_+	pfam09822, ABC_transp_aux, ABC-type uncharacterized transport system
