assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000307815.1_ASM30781v1	NC_018937	Helicobacter pylori Rif1, complete sequence	1	350472-350598	1	CRISPRCasFinder	no	cas2	cas3,cas2,cas14j,DEDDh	Unclear	CTCTCTAGCGTTACTGAAGAGATTATTTCAAAAAAAC	37	0	0	NA	NA	NA	1	1	Unclear	cas3,cas2,cas14j,DEDDh	NA|102aa|up_0|NC_018937.1_349780_350086_+,NA|89aa|down_1|NC_018937.1_351031_351298_+,NA|261aa|down_4|NC_018937.1_353220_354003_+	NA|518aa|up_9|NC_018937.1_341564_343118_+	COG3980, spsG, Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]	NA|181aa|up_8|NC_018937.1_343114_343657_+	TIGR03585, PseH, UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	NA|313aa|up_7|NC_018937.1_343589_344528_-	COG1663, LpxK, Tetraacyldisaccharide-1-P 4'-kinase [Cell envelope biogenesis, outer membrane]	NA|261aa|up_6|NC_018937.1_344524_345307_-	PRK13980, PRK13980, NAD synthetase; Provisional	NA|331aa|up_5|NC_018937.1_345555_346548_+	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional	NA|269aa|up_4|NC_018937.1_346572_347379_+	COG2894, MinD, Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]	NA|78aa|up_3|NC_018937.1_347375_347609_+	TIGR01215, Cell_division_topological_specificity_factor, cell division topological specificity factor MinE	NA|267aa|up_2|NC_018937.1_347620_348421_+	TIGR00732, Protein_smf, DNA protecting protein DprA	NA|135aa|up_1|NC_018937.1_348417_348822_+	PRK00109, PRK00109, Holliday junction resolvase RuvX	NA|102aa|up_0|NC_018937.1_349780_350086_+	NA	NA|119aa|down_0|NC_018937.1_350687_351044_+	cd00735, T4-like_lys, bacteriophage T4-like lysozymes	NA|89aa|down_1|NC_018937.1_351031_351298_+	NA	NA|129aa|down_2|NC_018937.1_351603_351990_+	COG3326, COG3326, Predicted membrane protein [Function unknown]	NA|112aa|down_3|NC_018937.1_352765_353101_+	COG4499, COG4499, Predicted membrane protein [Function unknown]	NA|261aa|down_4|NC_018937.1_353220_354003_+	NA	NA|299aa|down_5|NC_018937.1_353996_354893_-	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|517aa|down_6|NC_018937.1_354892_356443_-	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ	NA|539aa|down_7|NC_018937.1_356451_358068_-	PRK05380, pyrG, CTP synthetase; Validated	NA|223aa|down_8|NC_018937.1_358328_358997_+	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|568aa|down_9|NC_018937.1_359040_360744_+	TIGR00206, Flagellar_M-ring_protein, flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF)
GCF_000307815.1_ASM30781v1	NC_018937	Helicobacter pylori Rif1, complete sequence	2	556180-556467	1	PILER-CR	no		cas3,cas2,cas14j,DEDDh	Orphan	CTTCCTCTAAAAGTTTTCTCGCTTCAGGCGTGAGTAATTTCTCGCATTCTTTTTTCTCTTTTT	63	1	1	556243-556296	NC_018937.1_555913-555966	NA	2	2	Orphan	cas3,cas2,cas14j,DEDDh	NA|116aa|up_5|NC_018937.1_547334_547682_+,NA|482aa|up_4|NC_018937.1_548140_549586_+,NA|536aa|down_1|NC_018937.1_561631_563239_-,NA|219aa|down_3|NC_018937.1_564387_565044_+,NA|50aa|down_5|NC_018937.1_565772_565922_+,NA|127aa|down_7|NC_018937.1_567148_567529_-,NA|115aa|down_8|NC_018937.1_567961_568306_-,NA|377aa|down_9|NC_018937.1_568729_569860_+	NA|444aa|up_9|NC_018937.1_543014_544346_+	PRK05201, hslU, ATP-dependent protease ATPase subunit HslU	NA|302aa|up_8|NC_018937.1_544345_545251_+	COG1159, Era, GTPase [General function prediction only]	NA|331aa|up_7|NC_018937.1_545247_546240_+	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown]	NA|277aa|up_6|NC_018937.1_546328_547159_-	COG0790, COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only]	NA|116aa|up_5|NC_018937.1_547334_547682_+	NA	NA|482aa|up_4|NC_018937.1_548140_549586_+	NA	NA|170aa|up_3|NC_018937.1_549595_550105_+	pfam16494, Na_Ca_ex_C, C-terminal extension of sodium/calcium exchanger domain	NA|749aa|up_2|NC_018937.1_550223_552470_-	COG3505, VirD4, Type IV secretory pathway, VirD4 components [Intracellular trafficking and secretion]	NA|331aa|up_1|NC_018937.1_552478_553471_-	TIGR02788, conjugal_transfer_protein, P-type DNA transfer ATPase VirB11	NA|200aa|up_0|NC_018937.1_553475_554075_-	pfam09053, CagZ, CagZ	NA|523aa|down_0|NC_018937.1_560010_561579_-	COG3504, VirB9, Type IV secretory pathway, VirB9 components [Intracellular trafficking and secretion]	NA|536aa|down_1|NC_018937.1_561631_563239_-	NA	NA|253aa|down_2|NC_018937.1_563243_564002_-	COG3736, VirB8, Type IV secretory pathway, component VirB8 [Intracellular trafficking and secretion]	NA|219aa|down_3|NC_018937.1_564387_565044_+	NA	NA|224aa|down_4|NC_018937.1_565079_565751_+	pfam13117, Cag12, Cag pathogenicity island protein Cag12	NA|50aa|down_5|NC_018937.1_565772_565922_+	NA	NA|197aa|down_6|NC_018937.1_566132_566723_-	pfam16707, CagS, Cag pathogenicity island protein S of Helicobacter pylori	NA|127aa|down_7|NC_018937.1_567148_567529_-	NA	NA|115aa|down_8|NC_018937.1_567961_568306_-	NA	NA|377aa|down_9|NC_018937.1_568729_569860_+	NA
GCF_000307815.1_ASM30781v1	NC_018937	Helicobacter pylori Rif1, complete sequence	3	1166567-1166655	2	CRISPRCasFinder	no	cas14j	cas3,cas2,cas14j,DEDDh	Unclear	CATGCGAGAAGTAGTGGTTCAAGAACATT	29	0	0	NA	NA	NA	1	1	TypeV	cas3,cas2,cas14j,DEDDh	NA|113aa|up_9|NC_018937.1_1156430_1156769_+,NA|436aa|down_0|NC_018937.1_1167885_1169193_+	NA|113aa|up_9|NC_018937.1_1156430_1156769_+	NA	cas14j|428aa|up_8|NC_018937.1_1156737_1158021_-	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|149aa|up_7|NC_018937.1_1158072_1158519_+	pfam01797, Y1_Tnp, Transposase IS200 like	NA|291aa|up_6|NC_018937.1_1158732_1159605_-	COG0790, COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only]	NA|209aa|up_5|NC_018937.1_1159674_1160301_-	TIGR01182, KHG/KDPG_aldolase_	NA|609aa|up_4|NC_018937.1_1160319_1162146_-	TIGR01196, Phosphogluconate_dehydratase, 6-phosphogluconate dehydratase	NA|426aa|up_3|NC_018937.1_1162211_1163489_+	COG0364, Zwf, Glucose-6-phosphate 1-dehydrogenase [Carbohydrate transport and metabolism]	NA|228aa|up_2|NC_018937.1_1163499_1164183_+	TIGR01198, 6-phosphogluconolactonase_6PGL	NA|337aa|up_1|NC_018937.1_1164169_1165180_+	TIGR00749, Glucokinase_Glucose_kinase	NA|349aa|up_0|NC_018937.1_1165341_1166388_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|436aa|down_0|NC_018937.1_1167885_1169193_+	NA	NA|221aa|down_1|NC_018937.1_1169199_1169862_-	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|187aa|down_2|NC_018937.1_1170151_1170712_+	PRK05844, PRK05844, pyruvate flavodoxin oxidoreductase subunit gamma; Validated	NA|131aa|down_3|NC_018937.1_1170727_1171120_+	PRK09625, porD, pyruvate flavodoxin oxidoreductase subunit delta; Reviewed	NA|408aa|down_4|NC_018937.1_1171129_1172353_+	PRK09622, porA, 2-oxoacid:ferredoxin oxidoreductase subunit alpha	NA|315aa|down_5|NC_018937.1_1172365_1173310_+	cd03376, TPP_PFOR_porB_like, Thiamine pyrophosphate (TPP family), PFOR porB-like subfamily, TPP-binding module; composed of proteins similar to the beta subunit (porB) of the Helicobacter pylori four-subunit pyruvate ferredoxin oxidoreductase (PFOR), which are also found in archaea and some hyperthermophilic bacteria	NA|441aa|down_6|NC_018937.1_1173419_1174742_+	PRK08470, PRK08470, adenylosuccinate lyase; Provisional	NA|278aa|down_7|NC_018937.1_1174807_1175641_+	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|659aa|down_8|NC_018937.1_1175651_1177628_-	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|229aa|down_9|NC_018937.1_1177697_1178384_-	PRK13460, PRK13460, F0F1 ATP synthase subunit B; Provisional
