The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_018695	Paraburkholderia phenoliruptrix BR3459a chromosome 1, complete sequence	4152217	484453	493525	4152217		Hokovirus(16.67%)	7	NA	NA
WP_015001665.1|484453_486412_+	molecular chaperone DnaK	NA	A0A1V0SH73	Hokovirus	50.3	1.6e-145
WP_013587183.1|486681_487821_+	molecular chaperone DnaJ	NA	E3T4P7	Cafeteria_roenbergensis_virus	40.7	3.7e-25
WP_015001666.1|487846_489736_+	aminodeoxychorismate synthase component I	NA	S4VNU7	Pandoravirus	34.8	7.7e-52
WP_015001667.1|489818_490634_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	29.6	7.4e-36
WP_013587186.1|490667_491348_-	deoxynucleoside kinase	NA	A0A249XZR7	Enterococcus_phage	27.6	8.7e-06
WP_013587187.1|491344_491878_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_015001668.1|491926_493525_-	polynucleotide adenylyltransferase PcnB	NA	A0A172Q0J1	Acinetobacter_phage	30.6	3.4e-16
>prophage 2
NC_018695	Paraburkholderia phenoliruptrix BR3459a chromosome 1, complete sequence	4152217	725104	772934	4152217	transposase,integrase	Escherichia_phage(13.33%)	40	719342:719359	780622:780639
719342:719359	attL	GCTCGCGCTGCTCGGCGT	NA	NA	NA	NA
WP_015001845.1|725104_726238_-|transposase	transposase	transposase	Q9G0F2	Phage_Gifsy-1	54.4	1.5e-111
WP_041746006.1|726366_727278_+	GDP-mannose 4,6-dehydratase	NA	E5ES47	Bathycoccus_sp._RCC1105_virus	25.4	1.5e-08
WP_015001847.1|727730_728792_+	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	47.5	1.7e-85
WP_015001848.1|728802_729696_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	A0A291LA53	Escherichia_phage	58.8	7.0e-96
WP_015001849.1|729680_730232_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	53.6	4.7e-50
WP_015001850.1|730238_731132_+	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_015001851.1|731128_732037_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_015001344.1|732657_733074_+	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZBP6	Stx2-converting_phage	34.7	1.3e-12
WP_167330868.1|737113_737632_-|transposase	transposase	transposase	A0A0P0ZBP6	Stx2-converting_phage	50.0	9.6e-13
WP_167330869.1|737700_738141_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	33.1	8.7e-07
WP_041744979.1|738137_738434_-|transposase	IS3 family transposase	transposase	Q6H9S4	Enterobacteria_phage	36.3	7.6e-07
WP_015001859.1|738499_739474_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_015001860.1|739470_739887_-	GtrA family protein	NA	NA	NA	NA	NA
WP_015001861.1|739861_740791_-	transketolase	NA	NA	NA	NA	NA
WP_015001862.1|740787_741594_-	transketolase	NA	G9E5U1	Micromonas_pusilla_virus	30.2	3.0e-13
WP_015001863.1|741590_742637_-	NAD-dependent epimerase/dehydratase family protein	NA	M1IBX1	Acanthocystis_turfacea_Chlorella_virus	28.5	1.1e-15
WP_015001864.1|742648_743962_-	lipopolysaccharide biosynthesis protein RfbH	NA	A0A0P0YLZ6	Yellowstone_lake_phycodnavirus	35.8	1.1e-49
WP_015001865.1|743974_745045_-	CDP-glucose 4,6-dehydratase	NA	A0A222YY99	Synechococcus_phage	24.2	1.8e-13
WP_041746013.1|745044_745815_-	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_148281761.1|745811_747032_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041744983.1|748129_750574_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_148281762.1|750570_751065_+	hypothetical protein	NA	NA	NA	NA	NA
WP_051156723.1|751073_751538_+	glycosyltransferase family 1 protein	NA	NA	NA	NA	NA
WP_051156724.1|751585_752392_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_015001870.1|752400_753120_+	ABC transporter ATP-binding protein	NA	A0A2I4R674	Erysipelothrix_phage	29.0	3.5e-05
WP_015001871.1|753169_754561_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015001872.1|754553_755582_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015001873.1|755660_756962_+	FkbM family methyltransferase	NA	NA	NA	NA	NA
WP_041744987.1|757071_757896_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041744989.1|758422_759271_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_041744991.1|759267_760239_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_051156725.1|760232_761255_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_041746021.1|761266_763150_+	polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_081588192.1|763320_763689_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015001876.1|764794_765811_-	PRTRC system protein D	NA	NA	NA	NA	NA
WP_041744992.1|767425_768106_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085963831.1|768078_769259_-|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	41.4	8.2e-60
WP_015001879.1|770095_770758_+	NERD domain-containing protein	NA	NA	NA	NA	NA
WP_015001880.1|771458_771827_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015001881.1|771836_772934_-|integrase	integrase domain-containing protein	integrase	NA	NA	NA	NA
780622:780639	attR	ACGCCGAGCAGCGCGAGC	NA	NA	NA	NA
>prophage 3
NC_018695	Paraburkholderia phenoliruptrix BR3459a chromosome 1, complete sequence	4152217	3329303	3341712	4152217	protease	Methanothermobacter_phage(12.5%)	11	NA	NA
WP_041746376.1|3329303_3330518_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	34.3	1.4e-43
WP_015003583.1|3330588_3331608_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_013589406.1|3331622_3332069_+	dUTP diphosphatase	NA	S4TNT3	Salmonella_phage	68.7	4.3e-46
WP_015003584.1|3332150_3334448_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.2	1.4e-167
WP_006050100.1|3334444_3334759_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A218MMY6	uncultured_virus	44.6	5.8e-13
WP_007180614.1|3335307_3335514_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	81.8	2.4e-23
WP_015003585.1|3335831_3337088_-	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	64.8	1.2e-11
WP_015003586.1|3337423_3337993_+	pseudouridine synthase	NA	NA	NA	NA	NA
WP_027212290.1|3338379_3338574_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041745717.1|3338717_3339224_+	DUF192 domain-containing protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	40.2	4.2e-13
WP_015003588.1|3339606_3341712_+	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	26.5	3.3e-59
>prophage 1
NC_018672	Paraburkholderia phenoliruptrix BR3459a chromosome 2, complete sequence	2713495	2529558	2582158	2713495	transposase,holin	Catovirus(16.67%)	45	NA	NA
WP_013592268.1|2529558_2530461_+|holin	choline ABC transporter permease subunit	holin	NA	NA	NA	NA
WP_013592269.1|2530468_2531467_+	GlxA family transcriptional regulator	NA	NA	NA	NA	NA
WP_013592270.1|2531513_2532458_+|holin	choline ABC transporter substrate-binding protein	holin	NA	NA	NA	NA
WP_013592271.1|2532593_2533676_-	GlxA family transcriptional regulator	NA	NA	NA	NA	NA
WP_013592272.1|2533980_2535375_+	L-serine ammonia-lyase	NA	NA	NA	NA	NA
WP_013592273.1|2535441_2536686_+	sarcosine oxidase subunit beta family protein	NA	NA	NA	NA	NA
WP_013592274.1|2536712_2537027_+	sarcosine oxidase subunit delta	NA	NA	NA	NA	NA
WP_014973412.1|2537023_2540026_+	sarcosine oxidase subunit alpha family protein	NA	NA	NA	NA	NA
WP_013592276.1|2540015_2540672_+	sarcosine oxidase subunit gamma	NA	NA	NA	NA	NA
WP_014973413.1|2540727_2540991_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014973414.1|2541137_2542556_+	MFS transporter	NA	NA	NA	NA	NA
WP_014973415.1|2542633_2543818_-	class C beta-lactamase	NA	NA	NA	NA	NA
WP_014973416.1|2543987_2545673_-|holin	choline dehydrogenase	holin	A0A1V0S9M4	Catovirus	29.6	2.4e-52
WP_014973417.1|2545684_2547154_-	betaine-aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_041746736.1|2547218_2547806_-	transcriptional regulator BetI	NA	NA	NA	NA	NA
WP_013592283.1|2548026_2549226_+	formaldehyde dehydrogenase, glutathione-independent	NA	A0A2K9L7I1	Tupanvirus	27.2	1.1e-11
WP_013592284.1|2549347_2550343_-	GlxA family transcriptional regulator	NA	NA	NA	NA	NA
WP_014973419.1|2550879_2552154_+	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	55.3	1.5e-107
WP_013592286.1|2552172_2553144_+	membrane dipeptidase	NA	NA	NA	NA	NA
WP_014973420.1|2553197_2553734_+	4-vinyl reductase	NA	NA	NA	NA	NA
WP_014973421.1|2553802_2555866_+	NADH:flavin oxidoreductase	NA	NA	NA	NA	NA
WP_014973422.1|2555868_2557782_+	(Fe-S)-binding protein	NA	NA	NA	NA	NA
WP_013592290.1|2557786_2558956_+	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA	NA
WP_041746737.1|2558952_2559738_+	drug:proton antiporter	NA	NA	NA	NA	NA
WP_013592292.1|2559811_2561116_+	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA	NA
WP_014973424.1|2561149_2562397_+	hybrid-cluster NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_013592294.1|2562551_2563409_+	glycine betaine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_013592295.1|2563496_2564372_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_041746738.1|2564499_2565414_-	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	34.8	6.0e-34
WP_014973427.1|2565554_2567093_+|holin	choline-sulfatase	holin	A0A2P0VMN7	Tetraselmis_virus	24.0	6.6e-09
WP_014973428.1|2567155_2568109_+|holin	choline ABC transporter substrate-binding protein	holin	NA	NA	NA	NA
WP_014973429.1|2568375_2569524_+	porin	NA	NA	NA	NA	NA
WP_014973430.1|2569995_2570994_+	bifunctional enoyl-CoA hydratase/phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_013592301.1|2571204_2571951_+	beta-ketoacyl-ACP reductase	NA	NA	NA	NA	NA
WP_014973431.1|2572040_2572355_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_051156820.1|2572417_2574946_-	cation-translocating P-type ATPase	NA	A0A1J0FA34	Only_Syngen_Nebraska_virus	29.2	3.4e-71
WP_051156821.1|2574944_2575184_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013592305.1|2575264_2575741_+	CreA family protein	NA	NA	NA	NA	NA
WP_014973433.1|2575950_2576385_+	YeeE/YedE family protein	NA	NA	NA	NA	NA
WP_014973434.1|2576386_2576818_+	YeeE/YedE family protein	NA	NA	NA	NA	NA
WP_014973435.1|2576943_2578227_-	polyhydroxyalkanoate depolymerase	NA	NA	NA	NA	NA
WP_014973436.1|2578580_2579207_+	LemA family protein	NA	NA	NA	NA	NA
WP_014973437.1|2579298_2579775_+	universal stress protein	NA	NA	NA	NA	NA
WP_013592311.1|2579819_2580461_-	hypothetical protein	NA	NA	NA	NA	NA
WP_148281858.1|2580778_2582158_+|transposase	ISNCY family transposase	transposase	NA	NA	NA	NA
