assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000300005.1_ASM30000v1	NC_018691	Alcanivorax dieselolei B5, complete sequence	1	2055225-2055333	1	CRISPRCasFinder	no	DinG	csa3,cas3,DEDDh,WYL,DinG,Cas9_archaeal,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1	Type IV-A	CAAAAAATCGCCGGGAGAGATTTTTGACGTCGC	33	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,WYL,DinG,Cas9_archaeal,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1	NA,NA	NA|209aa|up_9|NC_018691.1_2045804_2046431_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|409aa|up_8|NC_018691.1_2046818_2048045_+	cd06328, PBP1_SBP-like, periplasmic substrate-binding domain of active transport proteins (substrate binding proteins or SBPs)	NA|260aa|up_7|NC_018691.1_2048135_2048915_+	cd03219, ABC_Mj1267_LivG_branched, ATP-binding cassette component of branched chain amino acids transport system	NA|242aa|up_6|NC_018691.1_2048911_2049637_+	cd03224, ABC_TM1139_LivF_branched, ATP-binding cassette domain of branched-chain amino acid transporter	NA|354aa|up_5|NC_018691.1_2049649_2050711_+	cd06582, TM_PBP1_LivH_like, Transmembrane subunit (TM) of Escherichia coli LivH and related proteins	NA|413aa|up_4|NC_018691.1_2050721_2051960_+	cd06581, TM_PBP1_LivM_like, Transmembrane subunit (TM) of Escherichia coli LivM and related proteins	NA|265aa|up_3|NC_018691.1_2051992_2052787_+	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional	NA|87aa|up_2|NC_018691.1_2053153_2053414_-	PRK00296, minE, cell division topological specificity factor MinE; Reviewed	NA|271aa|up_1|NC_018691.1_2053417_2054230_-	COG2894, MinD, Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]	NA|243aa|up_0|NC_018691.1_2054300_2055029_-	COG0850, MinC, Septum formation inhibitor [Cell division and chromosome partitioning]	NA|100aa|down_0|NC_018691.1_2055676_2055976_-	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning]	NA|83aa|down_1|NC_018691.1_2055965_2056214_-	COG2161, StbD, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|115aa|down_2|NC_018691.1_2056448_2056793_+	COG3791, COG3791, Uncharacterized conserved protein [Function unknown]	NA|420aa|down_3|NC_018691.1_2056884_2058144_-	pfam07804, HipA_C, HipA-like C-terminal domain	NA|102aa|down_4|NC_018691.1_2058147_2058453_-	COG3620, COG3620, Predicted transcriptional regulator with C-terminal CBS domains [Transcription]	NA|820aa|down_5|NC_018691.1_2058614_2061074_-	PRK13026, PRK13026, acyl-CoA dehydrogenase; Reviewed	NA|290aa|down_6|NC_018691.1_2061332_2062202_+	COG3118, COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones]	NA|438aa|down_7|NC_018691.1_2062556_2063870_+	COG0004, AmtB, Ammonia permease [Inorganic ion transport and metabolism]	NA|272aa|down_8|NC_018691.1_2064453_2065269_+	TIGR03709, PPK2_rel_1, polyphosphate:nucleotide phosphotransferase, PPK2 family	NA|129aa|down_9|NC_018691.1_2065407_2065794_+	pfam02036, SCP2, SCP-2 sterol transfer family
GCF_000300005.1_ASM30000v1	NC_018691	Alcanivorax dieselolei B5, complete sequence	2	2333883-2333965	2	CRISPRCasFinder	no		csa3,cas3,DEDDh,WYL,DinG,Cas9_archaeal,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1	Orphan	GCCAGCCGATGGCTCTGTCCGCCGCC	26	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,WYL,DinG,Cas9_archaeal,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1	NA|104aa|up_8|NC_018691.1_2327082_2327394_-,NA|109aa|up_7|NC_018691.1_2327538_2327865_-,NA|101aa|up_6|NC_018691.1_2328020_2328323_-,NA|69aa|up_5|NC_018691.1_2328440_2328647_-,NA|86aa|up_4|NC_018691.1_2328773_2329031_-,NA|178aa|up_1|NC_018691.1_2332720_2333254_-,NA|149aa|up_0|NC_018691.1_2333301_2333748_-,NA|75aa|down_1|NC_018691.1_2334953_2335178_-,NA|95aa|down_2|NC_018691.1_2335800_2336085_+,NA|290aa|down_3|NC_018691.1_2336064_2336934_-,NA|294aa|down_6|NC_018691.1_2338297_2339179_-,NA|72aa|down_9|NC_018691.1_2341823_2342039_-	NA|233aa|up_9|NC_018691.1_2326159_2326858_-	TIGR03748, conj_PilL, conjugative transfer region protein, TIGR03748 family	NA|104aa|up_8|NC_018691.1_2327082_2327394_-	NA	NA|109aa|up_7|NC_018691.1_2327538_2327865_-	NA	NA|101aa|up_6|NC_018691.1_2328020_2328323_-	NA	NA|69aa|up_5|NC_018691.1_2328440_2328647_-	NA	NA|86aa|up_4|NC_018691.1_2328773_2329031_-	NA	NA|712aa|up_3|NC_018691.1_2329246_2331382_-	PRK07726, PRK07726, DNA topoisomerase 3	NA|149aa|up_2|NC_018691.1_2331737_2332184_-	PRK08182, PRK08182, single-stranded DNA-binding protein; Provisional	NA|178aa|up_1|NC_018691.1_2332720_2333254_-	NA	NA|149aa|up_0|NC_018691.1_2333301_2333748_-	NA	NA|239aa|down_0|NC_018691.1_2333988_2334705_-	pfam08900, DUF1845, Domain of unknown function (DUF1845)	NA|75aa|down_1|NC_018691.1_2334953_2335178_-	NA	NA|95aa|down_2|NC_018691.1_2335800_2336085_+	NA	NA|290aa|down_3|NC_018691.1_2336064_2336934_-	NA	NA|132aa|down_4|NC_018691.1_2337000_2337396_-	cd18683, PIN_VapC-like, Uncharacterized subfamily of the VapC (virulence-associated protein C)-like family of the PIN domain superfamily	NA|89aa|down_5|NC_018691.1_2337392_2337659_-	smart00966, SpoVT_AbrB, SpoVT / AbrB like domain	NA|294aa|down_6|NC_018691.1_2338297_2339179_-	NA	NA|219aa|down_7|NC_018691.1_2339582_2340239_-	pfam11198, DUF2857, Protein of unknown function (DUF2857)	NA|536aa|down_8|NC_018691.1_2340226_2341834_-	TIGR03764, ICE_PFGI_1_parB, integrating conjugative element, PFGI_1 class, ParB family protein	NA|72aa|down_9|NC_018691.1_2341823_2342039_-	NA
GCF_000300005.1_ASM30000v1	NC_018691	Alcanivorax dieselolei B5, complete sequence	3	2857669-2857794	3	CRISPRCasFinder	no		csa3,cas3,DEDDh,WYL,DinG,Cas9_archaeal,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1	Orphan	GAAGCCGCTGTAGGAGCTTGCCCTGCAAGCGAAT	34	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,WYL,DinG,Cas9_archaeal,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1	NA|321aa|up_4|NC_018691.1_2849969_2850932_-,NA|117aa|up_3|NC_018691.1_2852247_2852598_-,NA	NA|347aa|up_9|NC_018691.1_2845203_2846244_+	PRK13286, amiE, aliphatic amidase	NA|374aa|up_8|NC_018691.1_2846339_2847461_+	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones]	NA|386aa|up_7|NC_018691.1_2847494_2848652_+	cd06357, PBP1_AmiC, periplasmic binding domain of amidase (AmiC) that belongs to the type 1 periplasmic binding fold protein family	NA|201aa|up_6|NC_018691.1_2848648_2849251_+	COG3707, AmiR, Response regulator with putative antiterminator output domain [Signal transduction mechanisms]	NA|173aa|up_5|NC_018691.1_2849296_2849815_+	cd13747, UreI_AmiS_like_1, UreI/Amis family, subgroup 1	NA|321aa|up_4|NC_018691.1_2849969_2850932_-	NA	NA|117aa|up_3|NC_018691.1_2852247_2852598_-	NA	NA|333aa|up_2|NC_018691.1_2852726_2853725_-	pfam13665, DUF4150, Domain of unknown function (DUF4150)	NA|456aa|up_1|NC_018691.1_2853714_2855082_-	pfam09937, DUF2169, Uncharacterized protein conserved in bacteria (DUF2169)	NA|713aa|up_0|NC_018691.1_2855085_2857224_-	TIGR03361, VI_Rhs_Vgr, type VI secretion system Vgr family protein	NA|255aa|down_0|NC_018691.1_2857875_2858640_-	PRK09464, pdhR, pyruvate dehydrogenase complex transcriptional repressor PdhR	NA|564aa|down_1|NC_018691.1_2858863_2860555_+	COG1620, LldP, L-lactate permease [Energy production and conversion]	NA|274aa|down_2|NC_018691.1_2860568_2861390_+	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion]	NA|480aa|down_3|NC_018691.1_2861386_2862826_+	COG1139, COG1139, Uncharacterized conserved protein containing a ferredoxin-like domain [Energy production and conversion]	NA|280aa|down_4|NC_018691.1_2862822_2863662_+	pfam02589, LUD_dom, LUD domain	NA|941aa|down_5|NC_018691.1_2863658_2866481_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|279aa|down_6|NC_018691.1_2866599_2867436_-	cd06503, ATP-synt_Fo_b, F-type ATP synthase, membrane subunit b	NA|509aa|down_7|NC_018691.1_2867497_2869024_-	COG1951, TtdA, Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain [Energy production and conversion]	NA|444aa|down_8|NC_018691.1_2869856_2871188_+	COG2067, FadL, Long-chain fatty acid transport protein [Lipid metabolism]	NA|473aa|down_9|NC_018691.1_2871202_2872621_+	pfam13205, Big_5, Bacterial Ig-like domain
GCF_000300005.1_ASM30000v1	NC_018691	Alcanivorax dieselolei B5, complete sequence	4	2902061-2902167	4	CRISPRCasFinder	no	csa3	csa3,cas3,DEDDh,WYL,DinG,Cas9_archaeal,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1	Type I-A	TTTTTTGTAACCGCCGTCCATGGCGGTTACC	31	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,WYL,DinG,Cas9_archaeal,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1	NA|205aa|up_9|NC_018691.1_2889761_2890376_-,NA|79aa|up_7|NC_018691.1_2891281_2891518_+,NA|183aa|up_1|NC_018691.1_2900229_2900778_-,NA	NA|205aa|up_9|NC_018691.1_2889761_2890376_-	NA	NA|166aa|up_8|NC_018691.1_2890481_2890979_-	pfam03974, Ecotin, Ecotin	NA|79aa|up_7|NC_018691.1_2891281_2891518_+	NA	NA|439aa|up_6|NC_018691.1_2892281_2893598_+	COG2067, FadL, Long-chain fatty acid transport protein [Lipid metabolism]	NA|1167aa|up_5|NC_018691.1_2893607_2897108_+	pfam13205, Big_5, Bacterial Ig-like domain	NA|526aa|up_4|NC_018691.1_2897446_2899024_-	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|112aa|up_3|NC_018691.1_2899098_2899434_-	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|128aa|up_2|NC_018691.1_2899430_2899814_-	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|183aa|up_1|NC_018691.1_2900229_2900778_-	NA	NA|232aa|up_0|NC_018691.1_2901251_2901947_-	pfam01797, Y1_Tnp, Transposase IS200 like	NA|331aa|down_0|NC_018691.1_2902194_2903187_-	TIGR03558, oxido_grp_1, luciferase family oxidoreductase, group 1	NA|81aa|down_1|NC_018691.1_2903508_2903751_-	pfam04325, DUF465, Protein of unknown function (DUF465)	NA|278aa|down_2|NC_018691.1_2903833_2904667_-	PRK09430, djlA, co-chaperone DjlA	NA|258aa|down_3|NC_018691.1_2904706_2905480_-	TIGR03234, OH-pyruv-isom, hydroxypyruvate isomerase	NA|638aa|down_4|NC_018691.1_2905626_2907540_-	COG0672, FTR1, High-affinity Fe2+/Pb2+ permease [Inorganic ion transport and metabolism]	NA|223aa|down_5|NC_018691.1_2907644_2908313_-	COG2818, Tag, 3-methyladenine DNA glycosylase [DNA replication, recombination, and repair]	NA|410aa|down_6|NC_018691.1_2908420_2909650_+	PRK09265, PRK09265, aminotransferase AlaT; Validated	NA|309aa|down_7|NC_018691.1_2909753_2910680_-	pfam10672, Methyltrans_SAM, S-adenosylmethionine-dependent methyltransferase	NA|299aa|down_8|NC_018691.1_2910868_2911765_+	PRK05457, PRK05457, protease HtpX	NA|341aa|down_9|NC_018691.1_2912114_2913137_+	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain
GCF_000300005.1_ASM30000v1	NC_018691	Alcanivorax dieselolei B5, complete sequence	5	3604391-3604491	5	CRISPRCasFinder	no		csa3,cas3,DEDDh,WYL,DinG,Cas9_archaeal,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1	Orphan	CGACGGCCCGCAGGGCCGCCGCCA	24	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,WYL,DinG,Cas9_archaeal,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1	NA|98aa|up_0|NC_018691.1_3603801_3604095_+,NA	NA|142aa|up_9|NC_018691.1_3596216_3596642_-	TIGR02801, Protein_TolR, TolR protein	NA|229aa|up_8|NC_018691.1_3596672_3597359_-	TIGR02796, Protein_TolQ, TolQ protein	NA|148aa|up_7|NC_018691.1_3597351_3597795_-	TIGR02799, Acyl-CoA_thioesterase_YbgC, tol-pal system-associated acyl-CoA thioesterase	NA|343aa|up_6|NC_018691.1_3597787_3598816_-	PRK00080, ruvB, Holliday junction branch migration DNA helicase RuvB	NA|201aa|up_5|NC_018691.1_3598899_3599502_-	PRK00116, ruvA, Holliday junction branch migration protein RuvA	NA|173aa|up_4|NC_018691.1_3599498_3600017_-	PRK00039, ruvC, Holliday junction resolvase; Reviewed	NA|244aa|up_3|NC_018691.1_3600270_3601002_-	PRK00110, PRK00110, YebC/PmpR family DNA-binding transcriptional regulator	NA|588aa|up_2|NC_018691.1_3601106_3602870_-	PRK00476, aspS, aspartyl-tRNA synthetase; Validated	NA|126aa|up_1|NC_018691.1_3603269_3603647_+	cd13834, HU_like, DNA-binding proteins similar to HU domains	NA|98aa|up_0|NC_018691.1_3603801_3604095_+	NA	NA|398aa|down_0|NC_018691.1_3604550_3605744_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|188aa|down_1|NC_018691.1_3605733_3606297_+	COG4567, COG4567, Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain [Signal transduction mechanisms / Transcription]	NA|592aa|down_2|NC_018691.1_3606616_3608392_+	COG0729, COG0729, Outer membrane protein [Cell envelope biogenesis, outer membrane]	NA|1148aa|down_3|NC_018691.1_3608412_3611856_+	COG2911, COG2911, Uncharacterized protein conserved in bacteria [Function unknown]	NA|128aa|down_4|NC_018691.1_3611848_3612232_-	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria	NA|572aa|down_5|NC_018691.1_3612442_3614158_+	PRK09194, PRK09194, prolyl-tRNA synthetase; Provisional	NA|333aa|down_6|NC_018691.1_3614164_3615163_-	pfam13271, DUF4062, Domain of unknown function (DUF4062)	NA|247aa|down_7|NC_018691.1_3615543_3616284_+	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|564aa|down_8|NC_018691.1_3616582_3618274_-	PRK11561, PRK11561, isovaleryl CoA dehydrogenase; Provisional	NA|221aa|down_9|NC_018691.1_3618270_3618933_-	COG1309, AcrR, Transcriptional regulator [Transcription]
GCF_000300005.1_ASM30000v1	NC_018691	Alcanivorax dieselolei B5, complete sequence	6	3933777-3937585	1,6,1	PILER-CR,CRISPRCasFinder,CRT	no	cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1,WYL	csa3,cas3,DEDDh,WYL,DinG,Cas9_archaeal,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1	Type I-F	TTTCTTAGCTGCCTGCGCGGCAGCGAAC,TTTCTTAGCTGCCTGCGCGGCAGCGAAC,TTTCTTAGCTGCCTGCGCGGCAGCGAAC	28,28,28	1	1	3934885-3934917	NC_018691.1_1868992-1868960	I-F:I-F:I-F	63,63,63	63	TypeI-F	csa3,cas3,DEDDh,WYL,DinG,Cas9_archaeal,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1	NA,NA|108aa|down_9|NC_018691.1_3947992_3948316_-	NA|540aa|up_9|NC_018691.1_3922572_3924192_+	COG1233, COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]	NA|236aa|up_8|NC_018691.1_3924206_3924914_+	cd01836, FeeA_FeeB_like, SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases	NA|233aa|up_7|NC_018691.1_3924918_3925617_-	COG1802, GntR, Transcriptional regulators [Transcription]	NA|411aa|up_6|NC_018691.1_3925840_3927073_+	cd06329, PBP1_SBP-like, periplasmic substrate-binding domain of active transport proteins (substrate binding proteins or SBPs)	NA|314aa|up_5|NC_018691.1_3927150_3928092_+	cd06582, TM_PBP1_LivH_like, Transmembrane subunit (TM) of Escherichia coli LivH and related proteins	NA|430aa|up_4|NC_018691.1_3928102_3929392_+	cd06581, TM_PBP1_LivM_like, Transmembrane subunit (TM) of Escherichia coli LivM and related proteins	NA|252aa|up_3|NC_018691.1_3929403_3930159_+	cd03219, ABC_Mj1267_LivG_branched, ATP-binding cassette component of branched chain amino acids transport system	NA|236aa|up_2|NC_018691.1_3930158_3930866_+	cd03224, ABC_TM1139_LivF_branched, ATP-binding cassette domain of branched-chain amino acid transporter	NA|530aa|up_1|NC_018691.1_3930903_3932493_+	COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	NA|400aa|up_0|NC_018691.1_3932501_3933701_+	cd01155, ACAD_FadE2, Acyl-CoA dehydrogenases similar to fadE2	cas6f|188aa|down_0|NC_018691.1_3937714_3938278_-	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	cas7f|346aa|down_1|NC_018691.1_3938281_3939319_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|329aa|down_2|NC_018691.1_3939337_3940324_-	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas8f|447aa|down_3|NC_018691.1_3940316_3941657_-	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1)	cas3-cas2|1129aa|down_4|NC_018691.1_3941700_3945087_-	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas1|325aa|down_5|NC_018691.1_3945083_3946058_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	WYL|326aa|down_6|NC_018691.1_3946250_3947228_-	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	NA|85aa|down_7|NC_018691.1_3947349_3947604_+	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,	NA|115aa|down_8|NC_018691.1_3947600_3947945_+	COG4226, HicB, Predicted nuclease of the RNAse H fold, HicB family [General    function prediction only]	NA|108aa|down_9|NC_018691.1_3947992_3948316_-	NA
