assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000299455.1_ASM29945v1	NC_018658	Escherichia coli O104:H4 str. 2011C-3493, complete sequence	1	677951-678202	1	PILER-CR	no		cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG,PrimPol,RT	Orphan	TTTTGGAGGAGCAGAAAGATGAATGACTGTCCACGACGCTATACCCAAAAGAAA	54	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG,PrimPol,RT	NA,NA|180aa|down_2|NC_018658.1_680988_681528_-	NA|158aa|up_9|NC_018658.1_667526_668000_-	PRK11425, PRK11425, PTS N-acetylgalactosamine transporter subunit IIB	NA|427aa|up_8|NC_018658.1_668022_669303_-	PRK15458, PRK15458, tagatose 6-phosphate aldolase subunit KbaZ; Provisional	NA|270aa|up_7|NC_018658.1_669551_670361_+	PRK09802, PRK09802, DeoR family transcriptional regulator	NA|155aa|up_6|NC_018658.1_670415_670880_-	pfam11663, Toxin_YhaV, Toxin with endonuclease activity, of toxin-antitoxin system	NA|112aa|up_5|NC_018658.1_670879_671215_-	PRK09974, PRK09974, type II toxin-antitoxin system PrlF family antitoxin	NA|524aa|up_4|NC_018658.1_671363_672935_-	TIGR03248, galactar-dH20, galactarate dehydratase	NA|445aa|up_3|NC_018658.1_673308_674643_+	TIGR00893, Probable_glucarate_transporter, D-galactonate transporter	NA|257aa|up_2|NC_018658.1_674658_675429_+	PRK10558, PRK10558, alpha-dehydro-beta-deoxy-D-glucarate aldolase; Provisional	NA|297aa|up_1|NC_018658.1_675458_676349_+	PRK11559, garR, tartronate semialdehyde reductase; Provisional	NA|382aa|up_0|NC_018658.1_676445_677591_+	PRK10342, PRK10342, glycerate kinase I; Provisional	NA|327aa|down_0|NC_018658.1_678461_679442_-	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|396aa|down_1|NC_018658.1_679779_680967_-	PRK09716, PRK09716, YhaC family protein	NA|180aa|down_2|NC_018658.1_680988_681528_-	NA	NA|115aa|down_3|NC_018658.1_681783_682128_-	PRK11424, PRK11424, DNA-binding transcriptional activator TdcR; Provisional	NA|313aa|down_4|NC_018658.1_682316_683255_+	PRK10341, PRK10341, transcriptional regulator TdcA	NA|330aa|down_5|NC_018658.1_683353_684343_+	PRK08638, PRK08638, bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA|444aa|down_6|NC_018658.1_684364_685696_+	PRK13629, PRK13629, threonine/serine transporter TdcC; Provisional	NA|403aa|down_7|NC_018658.1_685721_686930_+	PRK12379, PRK12379, propionate kinase	NA|765aa|down_8|NC_018658.1_686963_689258_+	cd01678, PFL1, Pyruvate formate lyase 1	NA|130aa|down_9|NC_018658.1_689271_689661_+	PRK11401, PRK11401, enamine/imine deaminase
GCF_000299455.1_ASM29945v1	NC_018658	Escherichia coli O104:H4 str. 2011C-3493, complete sequence	2	1161011-1161832	2,1,1	PILER-CR,CRISPRCasFinder,CRT	no		cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG,PrimPol,RT	Orphan	GAGTTCCCCGCGCCAGCGGGGATAAACC,GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG	28,29,29	0	0	NA	NA	I-E:I-E:I-E	13,13,13	13	Orphan	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG,PrimPol,RT	NA|47aa|up_1|NC_018658.1_1159720_1159861_-,NA	NA|919aa|up_9|NC_018658.1_1147604_1150361_-	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional	NA|434aa|up_8|NC_018658.1_1150417_1151719_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_7|NC_018658.1_1151766_1154001_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_6|NC_018658.1_1154078_1154327_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_5|NC_018658.1_1154326_1154662_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_4|NC_018658.1_1154732_1155524_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_3|NC_018658.1_1155751_1157389_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_2|NC_018658.1_1157476_1158775_+	PRK00077, eno, enolase; Provisional	NA|47aa|up_1|NC_018658.1_1159720_1159861_-	NA	NA|224aa|up_0|NC_018658.1_1159999_1160671_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NC_018658.1_1162470_1163949_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|NC_018658.1_1163975_1165253_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|NC_018658.1_1165571_1166357_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|NC_018658.1_1166426_1167881_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|470aa|down_4|NC_018658.1_1167902_1169312_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_5|NC_018658.1_1169289_1170069_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|287aa|down_6|NC_018658.1_1170065_1170926_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_7|NC_018658.1_1171073_1171649_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_8|NC_018658.1_1171665_1171926_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_9|NC_018658.1_1171916_1173188_-	PRK10015, PRK10015, oxidoreductase; Provisional
GCF_000299455.1_ASM29945v1	NC_018658	Escherichia coli O104:H4 str. 2011C-3493, complete sequence	3	1188881-1188970	2	CRISPRCasFinder	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG,PrimPol,RT	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG	29	0	0	NA	NA	I-E	1	1	TypeI-E	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG,PrimPol,RT	NA,NA	NA|51aa|up_9|NC_018658.1_1178530_1178683_+	pfam01848, HOK_GEF, Hok/gef family	NA|371aa|up_8|NC_018658.1_1178759_1179872_+	pfam01609, DDE_Tnp_1, Transposase DDE domain	cas3|900aa|up_7|NC_018658.1_1180225_1182925_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|521aa|up_6|NC_018658.1_1183022_1184585_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|179aa|up_5|NC_018658.1_1184581_1185118_+	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas7|352aa|up_4|NC_018658.1_1185129_1186185_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_3|NC_018658.1_1186195_1186942_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|NC_018658.1_1186923_1187574_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|307aa|up_1|NC_018658.1_1187570_1188491_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|NC_018658.1_1188490_1188784_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NC_018658.1_1189051_1190089_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NC_018658.1_1190340_1191249_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NC_018658.1_1191250_1192678_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NC_018658.1_1192677_1193283_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NC_018658.1_1193332_1193656_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NC_018658.1_1193849_1194161_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NC_018658.1_1194179_1194890_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NC_018658.1_1194889_1195369_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NC_018658.1_1195365_1196415_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NC_018658.1_1196395_1197157_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_000299455.1_ASM29945v1	NC_018658	Escherichia coli O104:H4 str. 2011C-3493, complete sequence	4	2442626-2442749	3	CRISPRCasFinder	no	DEDDh	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG,PrimPol,RT	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG,PrimPol,RT	NA,NA|30aa|down_7|NC_018658.1_2451645_2451735_+	NA|471aa|up_9|NC_018658.1_2432079_2433492_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NC_018658.1_2434048_2434258_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NC_018658.1_2434713_2435340_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NC_018658.1_2435360_2437463_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|213aa|up_5|NC_018658.1_2437475_2438114_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NC_018658.1_2438177_2438846_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NC_018658.1_2438842_2439628_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NC_018658.1_2439631_2440444_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NC_018658.1_2440455_2442060_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NC_018658.1_2442185_2442491_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NC_018658.1_2443063_2444320_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NC_018658.1_2444360_2445734_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NC_018658.1_2445948_2446590_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NC_018658.1_2446629_2447778_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NC_018658.1_2448068_2449280_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NC_018658.1_2449392_2450325_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NC_018658.1_2450321_2451347_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NC_018658.1_2451645_2451735_+	NA	NA|390aa|down_8|NC_018658.1_2451900_2453070_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NC_018658.1_2453215_2453797_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_000299455.1_ASM29945v1	NC_018658	Escherichia coli O104:H4 str. 2011C-3493, complete sequence	5	3255563-3255654	4	CRISPRCasFinder	no		cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG,PrimPol,RT	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG,PrimPol,RT	NA|70aa|up_9|NC_018658.1_3244813_3245023_-,NA|422aa|down_1|NC_018658.1_3265087_3266353_-,NA|149aa|down_3|NC_018658.1_3266624_3267071_-,NA|219aa|down_4|NC_018658.1_3267073_3267730_-,NA|134aa|down_5|NC_018658.1_3267823_3268225_-,NA|206aa|down_8|NC_018658.1_3269479_3270097_-,NA|93aa|down_9|NC_018658.1_3270102_3270381_-	NA|70aa|up_9|NC_018658.1_3244813_3245023_-	NA	NA|1321aa|up_8|NC_018658.1_3245077_3249040_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_7|NC_018658.1_3249079_3249718_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_6|NC_018658.1_3250005_3251097_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_5|NC_018658.1_3251096_3251789_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NC_018658.1_3251800_3252187_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_3|NC_018658.1_3252194_3252995_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NC_018658.1_3253004_3253595_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NC_018658.1_3253605_3254100_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NC_018658.1_3254120_3255449_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|2794aa|down_0|NC_018658.1_3256636_3265018_-	pfam18799, LPD5, Large polyvalent protein-associated domain 5	NA|422aa|down_1|NC_018658.1_3265087_3266353_-	NA	NA|84aa|down_2|NC_018658.1_3266363_3266615_-	TIGR03789, pdsO, proteobacterial sortase system peptidoglycan-associated protein	NA|149aa|down_3|NC_018658.1_3266624_3267071_-	NA	NA|219aa|down_4|NC_018658.1_3267073_3267730_-	NA	NA|134aa|down_5|NC_018658.1_3267823_3268225_-	NA	NA|47aa|down_6|NC_018658.1_3268281_3268422_-	PRK09759, PRK09759, type I toxin-antitoxin system toxin HokA	NA|245aa|down_7|NC_018658.1_3268654_3269389_-	pfam06316, Ail_Lom, Enterobacterial Ail/Lom protein	NA|206aa|down_8|NC_018658.1_3269479_3270097_-	NA	NA|93aa|down_9|NC_018658.1_3270102_3270381_-	NA
GCF_000299455.1_ASM29945v1	NC_018658	Escherichia coli O104:H4 str. 2011C-3493, complete sequence	6	3616023-3616136	3	PILER-CR	no		cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG,PrimPol,RT	Orphan	TTTTTTTACCTGATTCGGGTAAA	23	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG,PrimPol,RT	NA|47aa|up_8|NC_018658.1_3610742_3610883_-,NA|34aa|up_4|NC_018658.1_3612142_3612244_-,NA|84aa|up_3|NC_018658.1_3612340_3612592_-,NA|101aa|up_1|NC_018658.1_3614559_3614862_-,NA|72aa|down_9|NC_018658.1_3621270_3621486_+	NA|128aa|up_9|NC_018658.1_3610273_3610657_-	pfam06530, Phage_antitermQ, Phage antitermination protein Q	NA|47aa|up_8|NC_018658.1_3610742_3610883_-	NA	NA|97aa|up_7|NC_018658.1_3611237_3611528_-	pfam07102, DUF1364, Protein of unknown function (DUF1364)	NA|57aa|up_6|NC_018658.1_3611520_3611691_-	PRK09689, PRK09689, prophage protein NinE; Provisional	NA|152aa|up_5|NC_018658.1_3611690_3612146_-	PRK09741, PRK09741, hypothetical protein; Provisional	NA|34aa|up_4|NC_018658.1_3612142_3612244_-	NA	NA|84aa|up_3|NC_018658.1_3612340_3612592_-	NA	NA|80aa|up_2|NC_018658.1_3613168_3613408_-	pfam10548, P22_AR_C, P22AR C-terminal domain	NA|101aa|up_1|NC_018658.1_3614559_3614862_-	NA	NA|234aa|up_0|NC_018658.1_3614858_3615560_-	pfam06992, Phage_lambda_P, Replication protein P	NA|180aa|down_0|NC_018658.1_3616572_3617112_-	pfam06254, YdaT_toxin, Putative bacterial toxin ydaT	NA|77aa|down_1|NC_018658.1_3617181_3617412_-	pfam15943, YdaS_antitoxin, Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT	NA|230aa|down_2|NC_018658.1_3617517_3618207_+	COG2932, COG2932, Predicted transcriptional regulator [Transcription]	NA|69aa|down_3|NC_018658.1_3618804_3619011_+	PRK11354, kil, FtsZ inhibitor protein; Reviewed	NA|99aa|down_4|NC_018658.1_3619086_3619383_+	pfam06064, Gam, Host-nuclease inhibitor protein Gam	NA|262aa|down_5|NC_018658.1_3619388_3620174_+	TIGR01913, Uncharacterized_protein_UU154, phage recombination protein Bet	NA|227aa|down_6|NC_018658.1_3620170_3620851_+	pfam09588, YqaJ, YqaJ-like viral recombinase domain	NA|61aa|down_7|NC_018658.1_3620847_3621030_+	pfam07026, DUF1317, Protein of unknown function (DUF1317)	NA|64aa|down_8|NC_018658.1_3621002_3621194_+	pfam07131, DUF1382, Protein of unknown function (DUF1382)	NA|72aa|down_9|NC_018658.1_3621270_3621486_+	NA
GCF_000299455.1_ASM29945v1	NC_018658	Escherichia coli O104:H4 str. 2011C-3493, complete sequence	7	3625819-3625963	5	CRISPRCasFinder	no		cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG,PrimPol,RT	Orphan	GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	52	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG,PrimPol,RT	NA|72aa|up_6|NC_018658.1_3621270_3621486_+,NA|201aa|up_4|NC_018658.1_3622016_3622619_-,NA|56aa|up_3|NC_018658.1_3622861_3623029_+,NA	NA|227aa|up_9|NC_018658.1_3620170_3620851_+	pfam09588, YqaJ, YqaJ-like viral recombinase domain	NA|61aa|up_8|NC_018658.1_3620847_3621030_+	pfam07026, DUF1317, Protein of unknown function (DUF1317)	NA|64aa|up_7|NC_018658.1_3621002_3621194_+	pfam07131, DUF1382, Protein of unknown function (DUF1382)	NA|72aa|up_6|NC_018658.1_3621270_3621486_+	NA	NA|74aa|up_5|NC_018658.1_3621584_3621806_+	PHA00080, PHA00080, DksA-like zinc finger domain containing protein	NA|201aa|up_4|NC_018658.1_3622016_3622619_-	NA	NA|56aa|up_3|NC_018658.1_3622861_3623029_+	NA	NA|73aa|up_2|NC_018658.1_3623068_3623287_+	pfam07825, Exc, Excisionase-like protein	NA|357aa|up_1|NC_018658.1_3623264_3624335_+	cd00800, INT_Lambda_C, C-terminal catalytic domain of Lambda integrase, a tyrosine-based site-specific recombinase	NA|428aa|up_0|NC_018658.1_3624469_3625753_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|754aa|down_0|NC_018658.1_3625986_3628248_-	PRK11413, PRK11413, putative hydratase; Provisional	NA|478aa|down_1|NC_018658.1_3628430_3629864_-	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|351aa|down_2|NC_018658.1_3629939_3630992_-	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|318aa|down_3|NC_018658.1_3631175_3632129_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|332aa|down_4|NC_018658.1_3632169_3633165_-	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|273aa|down_5|NC_018658.1_3633319_3634138_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|353aa|down_6|NC_018658.1_3634138_3635197_-	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|230aa|down_7|NC_018658.1_3635199_3635889_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|258aa|down_8|NC_018658.1_3635888_3636662_-	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|50aa|down_9|NC_018658.1_3636828_3636978_-	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ
GCF_000299455.1_ASM29945v1	NC_018658	Escherichia coli O104:H4 str. 2011C-3493, complete sequence	8	3865115-3865211	6	CRISPRCasFinder	no		cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG,PrimPol,RT	Orphan	TTGTAGGCCTGATAAGATGCGTCAAGC	27	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG,PrimPol,RT	NA,NA	NA|231aa|up_9|NC_018658.1_3856900_3857593_-	PRK15195, PRK15195, molecular chaperone FimC	NA|181aa|up_8|NC_018658.1_3857812_3858355_-	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA	NA|289aa|up_7|NC_018658.1_3858835_3859702_+	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|71aa|up_6|NC_018658.1_3859703_3859916_+	PRK11507, PRK11507, ribosome-associated protein YbcJ	NA|174aa|up_5|NC_018658.1_3860023_3860545_+	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|462aa|up_4|NC_018658.1_3860580_3861966_-	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|165aa|up_3|NC_018658.1_3862139_3862634_+	PRK10791, PRK10791, peptidylprolyl isomerase B	NA|241aa|up_2|NC_018658.1_3862636_3863359_+	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|170aa|up_1|NC_018658.1_3863476_3863986_+	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]	NA|356aa|up_0|NC_018658.1_3863982_3865050_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|298aa|down_0|NC_018658.1_3865244_3866138_-	PRK09411, PRK09411, carbamate kinase; Reviewed	NA|272aa|down_1|NC_018658.1_3866134_3866950_-	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|420aa|down_2|NC_018658.1_3866960_3868220_-	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|556aa|down_3|NC_018658.1_3868229_3869897_-	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|350aa|down_4|NC_018658.1_3870213_3871263_+	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional	NA|412aa|down_5|NC_018658.1_3871284_3872520_+	TIGR03176, AllC, allantoate amidohydrolase	NA|262aa|down_6|NC_018658.1_3872530_3873316_+	COG3257, GlxB, Uncharacterized protein, possibly involved in glyoxylate utilization [General function prediction only]	NA|382aa|down_7|NC_018658.1_3873444_3874590_-	PRK09932, PRK09932, glycerate 3-kinase	NA|434aa|down_8|NC_018658.1_3874611_3875913_-	PRK11412, PRK11412, uracil/xanthine transporter	NA|454aa|down_9|NC_018658.1_3875969_3877331_-	PRK08044, PRK08044, allantoinase AllB
