bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NC_018608	Staphylococcus aureus 08BA02176, complete sequence	3.1|292911|25|NC_018608|CRISPRCasFinder	NC_018608.1	Staphylococcus aureus 08BA02176, complete sequence	92.00	25	2	0	1	25	293080	293104	55513-56620|65343-65590|292880-293079|702625-702733|864913-864995|914272-914352|1191213-1191293|1793333-1793415|1881687-1881780|1945160-1945302|2122249-2122461|2177881-2178031|2341811-2341896|2518017-2518111|2545963-2546073	4e-04	34.9	1.0	GGCGAAAATACAGCTTACAATAATG	293080-293104	GGCGAAAAGTCAGCTTACAATAATG	2
NC_018608	Staphylococcus aureus 08BA02176, complete sequence	3.2|292967|25|NC_018608|CRISPRCasFinder	NC_018608.1	Staphylococcus aureus 08BA02176, complete sequence	92.00	25	2	0	1	25	2133324	2133348	55513-56620|65343-65590|292880-293079|702625-702733|864913-864995|914272-914352|1191213-1191293|1793333-1793415|1881687-1881780|1945160-1945302|2122249-2122461|2177881-2178031|2341811-2341896|2518017-2518111|2545963-2546073	4e-04	34.9	1.0	TTGGAACAGCAATTTCTACAGACAA	2133324-2133348	TTGGAACACCAATTCCTACAGACAA	2
NC_018608	Staphylococcus aureus 08BA02176, complete sequence	5.1|864939|31|NC_018608|CRISPRCasFinder	NC_018608.1	Staphylococcus aureus 08BA02176, complete sequence	100.00	31	0	0	1	31	959237	959207	55513-56620|65343-65590|292880-293079|702625-702733|864913-864995|914272-914352|1191213-1191293|1793333-1793415|1881687-1881780|1945160-1945302|2122249-2122461|2177881-2178031|2341811-2341896|2518017-2518111|2545963-2546073	9e-09	50.7	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	959207-959237	GGGCCCCAACACAGAGAATTTCGAAAAGAAA	0
NC_018608	Staphylococcus aureus 08BA02176, complete sequence	5.1|864939|31|NC_018608|CRISPRCasFinder	NC_018608.1	Staphylococcus aureus 08BA02176, complete sequence	100.00	31	0	0	1	31	998043	998073	55513-56620|65343-65590|292880-293079|702625-702733|864913-864995|914272-914352|1191213-1191293|1793333-1793415|1881687-1881780|1945160-1945302|2122249-2122461|2177881-2178031|2341811-2341896|2518017-2518111|2545963-2546073	9e-09	50.7	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	998043-998073	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	0
NC_018608	Staphylococcus aureus 08BA02176, complete sequence	5.1|864939|31|NC_018608|CRISPRCasFinder	NC_018608.1	Staphylococcus aureus 08BA02176, complete sequence	100.00	31	0	0	1	31	1979145	1979175	55513-56620|65343-65590|292880-293079|702625-702733|864913-864995|914272-914352|1191213-1191293|1793333-1793415|1881687-1881780|1945160-1945302|2122249-2122461|2177881-2178031|2341811-2341896|2518017-2518111|2545963-2546073	9e-09	50.7	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	1979145-1979175	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	0
NC_018608	Staphylococcus aureus 08BA02176, complete sequence	5.1|864939|31|NC_018608|CRISPRCasFinder	NC_018608.1	Staphylococcus aureus 08BA02176, complete sequence	100.00	31	0	0	1	31	1979255	1979285	55513-56620|65343-65590|292880-293079|702625-702733|864913-864995|914272-914352|1191213-1191293|1793333-1793415|1881687-1881780|1945160-1945302|2122249-2122461|2177881-2178031|2341811-2341896|2518017-2518111|2545963-2546073	9e-09	50.7	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	1979255-1979285	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	0
NC_018608	Staphylococcus aureus 08BA02176, complete sequence	5.1|864939|31|NC_018608|CRISPRCasFinder	NC_018608.1	Staphylococcus aureus 08BA02176, complete sequence	100.00	31	0	0	1	31	2047511	2047541	55513-56620|65343-65590|292880-293079|702625-702733|864913-864995|914272-914352|1191213-1191293|1793333-1793415|1881687-1881780|1945160-1945302|2122249-2122461|2177881-2178031|2341811-2341896|2518017-2518111|2545963-2546073	9e-09	50.7	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	2047511-2047541	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	0
NC_018608	Staphylococcus aureus 08BA02176, complete sequence	5.1|864939|31|NC_018608|CRISPRCasFinder	NC_018608.1	Staphylococcus aureus 08BA02176, complete sequence	96.77	31	1	0	1	31	274892	274922	55513-56620|65343-65590|292880-293079|702625-702733|864913-864995|914272-914352|1191213-1191293|1793333-1793415|1881687-1881780|1945160-1945302|2122249-2122461|2177881-2178031|2341811-2341896|2518017-2518111|2545963-2546073	8e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	274892-274922	TTTCTTTTCGAAATTCTCTTTGTTGGGGCCC	1
NC_018608	Staphylococcus aureus 08BA02176, complete sequence	5.1|864939|31|NC_018608|CRISPRCasFinder	NC_018608.1	Staphylococcus aureus 08BA02176, complete sequence	96.77	31	1	0	1	31	274950	274980	55513-56620|65343-65590|292880-293079|702625-702733|864913-864995|914272-914352|1191213-1191293|1793333-1793415|1881687-1881780|1945160-1945302|2122249-2122461|2177881-2178031|2341811-2341896|2518017-2518111|2545963-2546073	8e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	274950-274980	TTTCTTTTCGAAATTCTCTTTGTTGGGGCCC	1
NC_018608	Staphylococcus aureus 08BA02176, complete sequence	5.1|864939|31|NC_018608|CRISPRCasFinder	NC_018608.1	Staphylococcus aureus 08BA02176, complete sequence	96.77	31	1	0	1	31	275008	275038	55513-56620|65343-65590|292880-293079|702625-702733|864913-864995|914272-914352|1191213-1191293|1793333-1793415|1881687-1881780|1945160-1945302|2122249-2122461|2177881-2178031|2341811-2341896|2518017-2518111|2545963-2546073	8e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	275008-275038	TTTCTTTTCGAAATTCTCTTTGTTGGGGCCC	1
NC_018608	Staphylococcus aureus 08BA02176, complete sequence	5.1|864939|31|NC_018608|CRISPRCasFinder	NC_018608.1	Staphylococcus aureus 08BA02176, complete sequence	96.77	31	1	0	1	31	414118	414088	55513-56620|65343-65590|292880-293079|702625-702733|864913-864995|914272-914352|1191213-1191293|1793333-1793415|1881687-1881780|1945160-1945302|2122249-2122461|2177881-2178031|2341811-2341896|2518017-2518111|2545963-2546073	8e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	414088-414118	GGGCCCCAACATAGAGAATTTCGAAAAGAAA	1
NC_018608	Staphylococcus aureus 08BA02176, complete sequence	5.1|864939|31|NC_018608|CRISPRCasFinder	NC_018608.1	Staphylococcus aureus 08BA02176, complete sequence	96.77	31	1	0	1	31	694122	694092	55513-56620|65343-65590|292880-293079|702625-702733|864913-864995|914272-914352|1191213-1191293|1793333-1793415|1881687-1881780|1945160-1945302|2122249-2122461|2177881-2178031|2341811-2341896|2518017-2518111|2545963-2546073	8e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	694092-694122	GGGGCCCAACACAGAGAATTTCGAAAAGAAA	1
NC_018608	Staphylococcus aureus 08BA02176, complete sequence	5.1|864939|31|NC_018608|CRISPRCasFinder	NC_018608.1	Staphylococcus aureus 08BA02176, complete sequence	96.77	31	1	0	1	31	818627	818597	55513-56620|65343-65590|292880-293079|702625-702733|864913-864995|914272-914352|1191213-1191293|1793333-1793415|1881687-1881780|1945160-1945302|2122249-2122461|2177881-2178031|2341811-2341896|2518017-2518111|2545963-2546073	8e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	818597-818627	GGGCCCCAACAAAGAGAATTTCGAAAAGAAA	1
NC_018608	Staphylococcus aureus 08BA02176, complete sequence	5.1|864939|31|NC_018608|CRISPRCasFinder	NC_018608.1	Staphylococcus aureus 08BA02176, complete sequence	96.77	31	1	0	1	31	909865	909895	55513-56620|65343-65590|292880-293079|702625-702733|864913-864995|914272-914352|1191213-1191293|1793333-1793415|1881687-1881780|1945160-1945302|2122249-2122461|2177881-2178031|2341811-2341896|2518017-2518111|2545963-2546073	8e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	909865-909895	TTTCTTTTCGAAATTCTCTATGTTGGGGCCC	1
NC_018608	Staphylococcus aureus 08BA02176, complete sequence	5.1|864939|31|NC_018608|CRISPRCasFinder	NC_018608.1	Staphylococcus aureus 08BA02176, complete sequence	96.77	31	1	0	1	31	1091010	1091040	55513-56620|65343-65590|292880-293079|702625-702733|864913-864995|914272-914352|1191213-1191293|1793333-1793415|1881687-1881780|1945160-1945302|2122249-2122461|2177881-2178031|2341811-2341896|2518017-2518111|2545963-2546073	8e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	1091010-1091040	TTTCTTTTCGAAATTCTCTTTGTTGGGGCCC	1
NC_018608	Staphylococcus aureus 08BA02176, complete sequence	5.1|864939|31|NC_018608|CRISPRCasFinder	NC_018608.1	Staphylococcus aureus 08BA02176, complete sequence	96.77	31	1	0	1	31	1790900	1790870	55513-56620|65343-65590|292880-293079|702625-702733|864913-864995|914272-914352|1191213-1191293|1793333-1793415|1881687-1881780|1945160-1945302|2122249-2122461|2177881-2178031|2341811-2341896|2518017-2518111|2545963-2546073	8e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	1790870-1790900	GGGCCCCAACATAGAGAATTTCGAAAAGAAA	1
NC_018608	Staphylococcus aureus 08BA02176, complete sequence	5.1|864939|31|NC_018608|CRISPRCasFinder	NC_018608.1	Staphylococcus aureus 08BA02176, complete sequence	96.77	31	1	0	1	31	1881678	1881648	55513-56620|65343-65590|292880-293079|702625-702733|864913-864995|914272-914352|1191213-1191293|1793333-1793415|1881687-1881780|1945160-1945302|2122249-2122461|2177881-2178031|2341811-2341896|2518017-2518111|2545963-2546073	8e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	1881648-1881678	GGGCCCCAACACAGAGAATTTCGACAAGAAA	1
NC_018608	Staphylococcus aureus 08BA02176, complete sequence	5.1|864939|31|NC_018608|CRISPRCasFinder	NC_018608.1	Staphylococcus aureus 08BA02176, complete sequence	96.77	31	1	0	1	31	2296745	2296775	55513-56620|65343-65590|292880-293079|702625-702733|864913-864995|914272-914352|1191213-1191293|1793333-1793415|1881687-1881780|1945160-1945302|2122249-2122461|2177881-2178031|2341811-2341896|2518017-2518111|2545963-2546073	8e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	2296745-2296775	TTTCTTTTCGAAATTCTCTTTGTTGGGGCCC	1
NC_018608	Staphylococcus aureus 08BA02176, complete sequence	5.1|864939|31|NC_018608|CRISPRCasFinder	NC_018608.1	Staphylococcus aureus 08BA02176, complete sequence	96.77	31	1	0	1	31	2341759	2341729	55513-56620|65343-65590|292880-293079|702625-702733|864913-864995|914272-914352|1191213-1191293|1793333-1793415|1881687-1881780|1945160-1945302|2122249-2122461|2177881-2178031|2341811-2341896|2518017-2518111|2545963-2546073	8e-08	47.5	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	2341729-2341759	GGGCCCCAACACAGAGAATTTCAAAAAGAAA	1
NC_018608	Staphylococcus aureus 08BA02176, complete sequence	5.1|864939|31|NC_018608|CRISPRCasFinder	NC_018608.1	Staphylococcus aureus 08BA02176, complete sequence	93.55	31	2	0	1	31	873920	873950	55513-56620|65343-65590|292880-293079|702625-702733|864913-864995|914272-914352|1191213-1191293|1793333-1793415|1881687-1881780|1945160-1945302|2122249-2122461|2177881-2178031|2341811-2341896|2518017-2518111|2545963-2546073	7e-07	44.4	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	873920-873950	TTTCATTTCGAAATTCTCTATGTTGGGGCCC	2
NC_018608	Staphylococcus aureus 08BA02176, complete sequence	5.1|864939|31|NC_018608|CRISPRCasFinder	NC_018608.1	Staphylococcus aureus 08BA02176, complete sequence	93.55	31	2	0	1	31	914003	913973	55513-56620|65343-65590|292880-293079|702625-702733|864913-864995|914272-914352|1191213-1191293|1793333-1793415|1881687-1881780|1945160-1945302|2122249-2122461|2177881-2178031|2341811-2341896|2518017-2518111|2545963-2546073	7e-07	44.4	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	913973-914003	GGTCCCCAACACAGAGGATTTCGAAAAGAAA	2
NC_018608	Staphylococcus aureus 08BA02176, complete sequence	5.1|864939|31|NC_018608|CRISPRCasFinder	NC_018608.1	Staphylococcus aureus 08BA02176, complete sequence	93.55	31	2	0	1	31	1401253	1401283	55513-56620|65343-65590|292880-293079|702625-702733|864913-864995|914272-914352|1191213-1191293|1793333-1793415|1881687-1881780|1945160-1945302|2122249-2122461|2177881-2178031|2341811-2341896|2518017-2518111|2545963-2546073	7e-07	44.4	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	1401253-1401283	TTTCTTTTCGGAATTCTCTGTGTTGGAGCCC	2
NC_018608	Staphylococcus aureus 08BA02176, complete sequence	5.1|864939|31|NC_018608|CRISPRCasFinder	NC_018608.1	Staphylococcus aureus 08BA02176, complete sequence	93.55	31	2	0	1	31	1447343	1447373	55513-56620|65343-65590|292880-293079|702625-702733|864913-864995|914272-914352|1191213-1191293|1793333-1793415|1881687-1881780|1945160-1945302|2122249-2122461|2177881-2178031|2341811-2341896|2518017-2518111|2545963-2546073	7e-07	44.4	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	1447343-1447373	TTTCTTTTCGAAAATCTCTGTGTTGAGGCCC	2
NC_018608	Staphylococcus aureus 08BA02176, complete sequence	5.1|864939|31|NC_018608|CRISPRCasFinder	NC_018608.1	Staphylococcus aureus 08BA02176, complete sequence	93.55	31	2	0	1	31	2742811	2742841	55513-56620|65343-65590|292880-293079|702625-702733|864913-864995|914272-914352|1191213-1191293|1793333-1793415|1881687-1881780|1945160-1945302|2122249-2122461|2177881-2178031|2341811-2341896|2518017-2518111|2545963-2546073	7e-07	44.4	1.0	TTTCTTTTCGAAATTCTCTGTGTTGGGGCCC	2742811-2742841	TTTCTTTTCGAAATTCTCTGTATTGGGGGCC	2
NC_018608	Staphylococcus aureus 08BA02176, complete sequence	6.1|914297|31|NC_018608|CRISPRCasFinder	NC_018608.1	Staphylococcus aureus 08BA02176, complete sequence	93.55	31	2	0	1	31	859366	859336	55513-56620|65343-65590|292880-293079|702625-702733|864913-864995|914272-914352|1191213-1191293|1793333-1793415|1881687-1881780|1945160-1945302|2122249-2122461|2177881-2178031|2341811-2341896|2518017-2518111|2545963-2546073	7e-07	44.4	1.0	AAGAACCAATACATAATAAAGCATAAGTGAT	859336-859366	ATCACTAATGATTTATTATGTATTGGTTCTT	2
NC_018608	Staphylococcus aureus 08BA02176, complete sequence	9.1|1881721|26|NC_018608|CRISPRCasFinder	NC_018608.1	Staphylococcus aureus 08BA02176, complete sequence	100.00	26	0	0	1	26	1979217	1979192	55513-56620|65343-65590|292880-293079|702625-702733|864913-864995|914272-914352|1191213-1191293|1793333-1793415|1881687-1881780|1945160-1945302|2122249-2122461|2177881-2178031|2341811-2341896|2518017-2518111|2545963-2546073	1e-06	42.8	1.0	AGAATTTCAAAAAAGAAATTCTACAG	1979192-1979217	CTGTAGAATTTCTTTTTTGAAATTCT	0
NC_018608	Staphylococcus aureus 08BA02176, complete sequence	13.1|2341841|26|NC_018608|CRISPRCasFinder	NC_018608.1	Staphylococcus aureus 08BA02176, complete sequence	100.00	26	0	0	1	26	1665434	1665409	55513-56620|65343-65590|292880-293079|702625-702733|864913-864995|914272-914352|1191213-1191293|1793333-1793415|1881687-1881780|1945160-1945302|2122249-2122461|2177881-2178031|2341811-2341896|2518017-2518111|2545963-2546073	1e-06	42.8	1.0	CGGGGCCCCAACATAGAAGCTGGCGG	1665409-1665434	CCGCCAGCTTCTATGTTGGGGCCCCG	0
NC_018608	Staphylococcus aureus 08BA02176, complete sequence	13.1|2341841|26|NC_018608|CRISPRCasFinder	NC_018608.1	Staphylococcus aureus 08BA02176, complete sequence	96.15	26	1	0	1	26	909954	909929	55513-56620|65343-65590|292880-293079|702625-702733|864913-864995|914272-914352|1191213-1191293|1793333-1793415|1881687-1881780|1945160-1945302|2122249-2122461|2177881-2178031|2341811-2341896|2518017-2518111|2545963-2546073	1e-05	39.6	1.0	CGGGGCCCCAACATAGAAGCTGGCGG	909929-909954	CCGTCAGCTTCTATGTTGGGGCCCCG	1
NC_018608	Staphylococcus aureus 08BA02176, complete sequence	13.1|2341841|26|NC_018608|CRISPRCasFinder	NC_018608.1	Staphylococcus aureus 08BA02176, complete sequence	92.31	26	2	0	1	26	914074	914099	55513-56620|65343-65590|292880-293079|702625-702733|864913-864995|914272-914352|1191213-1191293|1793333-1793415|1881687-1881780|1945160-1945302|2122249-2122461|2177881-2178031|2341811-2341896|2518017-2518111|2545963-2546073	1e-04	36.5	1.0	CGGGGCCCCAACATAGAAGCTGGCGG	914074-914099	CGGGGCCCCAACATAGTAGCAGGCGG	2
NC_018608	Staphylococcus aureus 08BA02176, complete sequence	13.1|2341841|26|NC_018608|CRISPRCasFinder	NC_018608.1	Staphylococcus aureus 08BA02176, complete sequence	92.31	26	2	0	1	26	959012	959037	55513-56620|65343-65590|292880-293079|702625-702733|864913-864995|914272-914352|1191213-1191293|1793333-1793415|1881687-1881780|1945160-1945302|2122249-2122461|2177881-2178031|2341811-2341896|2518017-2518111|2545963-2546073	1e-04	36.5	1.0	CGGGGCCCCAACATAGAAGCTGGCGG	959012-959037	CGGGGCCCCAACACAGAAGCTGGTGG	2
NC_018608	Staphylococcus aureus 08BA02176, complete sequence	13.1|2341841|26|NC_018608|CRISPRCasFinder	NC_018608.1	Staphylococcus aureus 08BA02176, complete sequence	92.31	26	2	0	1	26	1396924	1396949	55513-56620|65343-65590|292880-293079|702625-702733|864913-864995|914272-914352|1191213-1191293|1793333-1793415|1881687-1881780|1945160-1945302|2122249-2122461|2177881-2178031|2341811-2341896|2518017-2518111|2545963-2546073	1e-04	36.5	1.0	CGGGGCCCCAACATAGAAGCTGGCGG	1396924-1396949	CGGGGCCCCAACACAGAAACTGGCGG	2
NC_018608	Staphylococcus aureus 08BA02176, complete sequence	13.1|2341841|26|NC_018608|CRISPRCasFinder	NC_018608.1	Staphylococcus aureus 08BA02176, complete sequence	92.31	26	2	0	1	26	2133362	2133387	55513-56620|65343-65590|292880-293079|702625-702733|864913-864995|914272-914352|1191213-1191293|1793333-1793415|1881687-1881780|1945160-1945302|2122249-2122461|2177881-2178031|2341811-2341896|2518017-2518111|2545963-2546073	1e-04	36.5	1.0	CGGGGCCCCAACATAGAAGCTGGCGG	2133362-2133387	CGGGGCCCCAACACAAAAGCTGGCGG	2
NC_018608	Staphylococcus aureus 08BA02176, complete sequence	13.1|2341841|26|NC_018608|CRISPRCasFinder	NC_018608.1	Staphylococcus aureus 08BA02176, complete sequence	92.31	26	2	0	1	26	2473763	2473738	55513-56620|65343-65590|292880-293079|702625-702733|864913-864995|914272-914352|1191213-1191293|1793333-1793415|1881687-1881780|1945160-1945302|2122249-2122461|2177881-2178031|2341811-2341896|2518017-2518111|2545963-2546073	1e-04	36.5	1.0	CGGGGCCCCAACATAGAAGCTGGCGG	2473738-2473763	CCGCCAGCTACTGTGTTGGGGCCCCG	2
