assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000294495.1_ASM29449v1	NC_018526	Streptococcus suis S735, complete sequence	1	16638-16768	1	CRISPRCasFinder	no	cas3	cas3,PrimPol,DinG,csa3,DEDDh	Unclear	GAGTTGTCTCTTGAGGGACTAGTTAACAGAGGAACGAAAAAA	42	0	0	NA	NA	NA	1	1	Unclear	cas3,PrimPol,DinG,csa3,DEDDh	NA,NA	NA|372aa|up_9|NC_018526.1_4398_5514_+	PRK09601, PRK09601, redox-regulated ATPase YchF	NA|190aa|up_8|NC_018526.1_5671_6241_+	PRK05426, PRK05426, peptidyl-tRNA hydrolase; Provisional	cas3|1165aa|up_7|NC_018526.1_6240_9735_+	COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription]	NA|91aa|up_6|NC_018526.1_9784_10057_+	COG1188, COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]	NA|123aa|up_5|NC_018526.1_10043_10412_+	COG2919, COG2919, Septum formation initiator [Cell division and chromosome partitioning]	NA|427aa|up_4|NC_018526.1_10534_11815_+	pfam13354, Beta-lactamase2, Beta-lactamase enzyme family	NA|423aa|up_3|NC_018526.1_11815_13084_+	cd01992, PP-ATPase, N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromosome partitioning]	NA|181aa|up_2|NC_018526.1_13091_13634_+	COG0634, Hpt, Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]	NA|658aa|up_1|NC_018526.1_13655_15629_+	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH	NA|157aa|up_0|NC_018526.1_15966_16437_+	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|279aa|down_0|NC_018526.1_23561_24398_+	PRK13922, PRK13922, rod shape-determining protein MreC; Provisional	NA|172aa|down_1|NC_018526.1_24387_24903_+	pfam04093, MreD, rod shape-determining protein MreD	NA|419aa|down_2|NC_018526.1_24987_26244_+	COG3883, COG3883, Uncharacterized protein conserved in bacteria [Function unknown]	NA|323aa|down_3|NC_018526.1_26346_27315_+	PRK02269, PRK02269, ribose-phosphate diphosphokinase	NA|393aa|down_4|NC_018526.1_27401_28580_+	PRK07309, PRK07309, pyridoxal phosphate-dependent aminotransferase	NA|261aa|down_5|NC_018526.1_28566_29349_+	TIGR00613, DNA_repair_protein_RecO, DNA repair protein RecO	NA|336aa|down_6|NC_018526.1_29345_30353_+	PRK05331, PRK05331, phosphate acyltransferase PlsX	NA|83aa|down_7|NC_018526.1_30345_30594_+	PRK12449, PRK12449, acyl carrier protein; Provisional	NA|236aa|down_8|NC_018526.1_30711_31419_+	PRK09362, PRK09362, phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed	NA|1240aa|down_9|NC_018526.1_31431_35151_+	TIGR01857, FGAM-synthase, phosphoribosylformylglycinamidine synthase, clade II
GCF_000294495.1_ASM29449v1	NC_018526	Streptococcus suis S735, complete sequence	2	87427-87557	2	CRISPRCasFinder	no		cas3,PrimPol,DinG,csa3,DEDDh	Orphan	GAGTTGTCTCTTGAGGGACTAGTTAACAGAGGAACGAAAAAA	42	0	0	NA	NA	NA	1	1	Orphan	cas3,PrimPol,DinG,csa3,DEDDh	NA,NA	NA|61aa|up_9|NC_018526.1_81646_81829_+	PRK05611, rpmD, 50S ribosomal protein L30; Reviewed	NA|147aa|up_8|NC_018526.1_81964_82405_+	PRK05592, rplO, 50S ribosomal protein L15; Reviewed	NA|437aa|up_7|NC_018526.1_82418_83729_+	PRK09204, secY, preprotein translocase subunit SecY; Reviewed	NA|214aa|up_6|NC_018526.1_83822_84464_+	PRK00279, adk, adenylate kinase; Reviewed	NA|73aa|up_5|NC_018526.1_84585_84804_+	PRK00276, infA, translation initiation factor IF-1; Validated	NA|39aa|up_4|NC_018526.1_84828_84945_+	pfam00444, Ribosomal_L36, Ribosomal protein L36	NA|122aa|up_3|NC_018526.1_84964_85330_+	PRK05179, rpsM, 30S ribosomal protein S13; Validated	NA|128aa|up_2|NC_018526.1_85347_85731_+	PRK05309, PRK05309, 30S ribosomal protein S11; Validated	NA|313aa|up_1|NC_018526.1_85775_86714_+	PRK05182, PRK05182, DNA-directed RNA polymerase subunit alpha; Provisional	NA|129aa|up_0|NC_018526.1_86728_87115_+	PRK05591, rplQ, 50S ribosomal protein L17; Validated	NA|261aa|down_0|NC_018526.1_93991_94774_+	pfam11185, DUF2971, Protein of unknown function (DUF2971)	NA|92aa|down_1|NC_018526.1_94770_95046_-	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|148aa|down_2|NC_018526.1_95494_95938_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|235aa|down_3|NC_018526.1_95938_96643_+	COG1121, ZnuC, ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]	NA|271aa|down_4|NC_018526.1_96635_97448_+	pfam00950, ABC-3, ABC 3 transport family	NA|504aa|down_5|NC_018526.1_97457_98969_+	cd01017, AdcA, Metal binding protein AdcA	NA|157aa|down_6|NC_018526.1_99071_99542_+	TIGR02698, Uncharacterized_16	NA|70aa|down_7|NC_018526.1_99722_99932_+	cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones	NA|126aa|down_8|NC_018526.1_99959_100337_-	COG0537, Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases [Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only]	NA|419aa|down_9|NC_018526.1_100394_101651_-	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated
GCF_000294495.1_ASM29449v1	NC_018526	Streptococcus suis S735, complete sequence	3	382055-382268	1	PILER-CR	no		cas3,PrimPol,DinG,csa3,DEDDh	Orphan	TAAAAGGTTGGAGATTGGAA	20	0	0	NA	NA	NA	3	3	Orphan	cas3,PrimPol,DinG,csa3,DEDDh	NA,NA|307aa|down_2|NC_018526.1_384042_384963_+	NA|137aa|up_9|NC_018526.1_369231_369642_+	PRK09218, PRK09218, peptide deformylase; Validated	NA|700aa|up_8|NC_018526.1_369946_372046_+	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones]	NA|503aa|up_7|NC_018526.1_372228_373737_+	PRK14508, PRK14508, 4-alpha-glucanotransferase; Provisional	NA|755aa|up_6|NC_018526.1_373729_375994_+	cd04300, GT35_Glycogen_Phosphorylase, glycogen phosphorylase and similar proteins	NA|236aa|up_5|NC_018526.1_376221_376929_-	TIGR02404, Trehalose_operon_transcriptional_repressor, trehalose operon repressor, B	NA|264aa|up_4|NC_018526.1_377127_377919_+	cd09079, RgfB-like, Streptococcus agalactiae RgfB, part of a putative two component signal transduction system, and related proteins	NA|723aa|up_3|NC_018526.1_377952_380121_+	TIGR02003, PTS_system_glucose-specific_IIBC_component, PTS system, IIBC component	NA|209aa|up_2|NC_018526.1_380191_380818_-	pfam11193, DUF2812, Protein of unknown function (DUF2812)	NA|104aa|up_1|NC_018526.1_380828_381140_-	TIGR03433, padR_acidobact, transcriptional regulator, Acidobacterial, PadR-family	NA|239aa|up_0|NC_018526.1_381300_382017_+	PRK12378, PRK12378, YebC/PmpR family DNA-binding transcriptional regulator	NA|283aa|down_0|NC_018526.1_382520_383369_+	COG1912, COG1912, Uncharacterized conserved protein [Function unknown]	NA|182aa|down_1|NC_018526.1_383389_383935_+	PRK13661, PRK13661, ECF-type riboflavin transporter substrate-binding protein	NA|307aa|down_2|NC_018526.1_384042_384963_+	NA	NA|328aa|down_3|NC_018526.1_385175_386159_+	PRK00142, PRK00142, rhodanese-related sulfurtransferase	NA|104aa|down_4|NC_018526.1_386416_386728_+	COG3607, COG3607, Predicted lactoylglutathione lyase [General function prediction only]	NA|558aa|down_5|NC_018526.1_386845_388519_+	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system	NA|278aa|down_6|NC_018526.1_388515_389349_+	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism]	NA|68aa|down_7|NC_018526.1_389508_389712_+	COG1278, CspC, Cold shock proteins [Transcription]	NA|238aa|down_8|NC_018526.1_389753_390467_-	PRK00107, gidB, 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA|729aa|down_9|NC_018526.1_390525_392712_-	TIGR02074, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein, 1A family
GCF_000294495.1_ASM29449v1	NC_018526	Streptococcus suis S735, complete sequence	4	1615337-1615481	3	CRISPRCasFinder	no		cas3,PrimPol,DinG,csa3,DEDDh	Orphan	GTCCACTCTCGCCGTTGCGCCTTTCCAGTTTCTTGGGCGCAAG	43	0	0	NA	NA	NA	1	1	Orphan	cas3,PrimPol,DinG,csa3,DEDDh	NA,NA|397aa|down_5|NC_018526.1_1619416_1620607_+	NA|626aa|up_9|NC_018526.1_1602998_1604876_-	TIGR01996, Includes:_Phosphotransferase_enzyme_IIB_component, PTS system, sucrose-specific IIBC component	NA|485aa|up_8|NC_018526.1_1605081_1606536_+	TIGR01322, Sucrose-6-phosphate_hydrolase, sucrose-6-phosphate hydrolase	NA|322aa|up_7|NC_018526.1_1606516_1607482_+	cd06291, PBP1_Qymf-like, ligand binding domain of the lacI-like transcription regulator from a novel metal-reducing bacterium Alkaliphilus Metalliredigens (strain Qymf) and its close homologs	NA|140aa|up_6|NC_018526.1_1607562_1607982_-	PRK00202, nusB, transcription antitermination factor NusB	NA|131aa|up_5|NC_018526.1_1607971_1608364_-	pfam03780, Asp23, Asp23 family, cell envelope-related function	NA|186aa|up_4|NC_018526.1_1608391_1608949_-	PRK00529, PRK00529, elongation factor P; Validated	NA|354aa|up_3|NC_018526.1_1609012_1610074_-	COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism]	NA|942aa|up_2|NC_018526.1_1610172_1612998_-	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|315aa|up_1|NC_018526.1_1613501_1614446_+	cd12827, EcCorA_ZntB-like_u2, uncharacterized bacterial subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB family	NA|219aa|up_0|NC_018526.1_1614461_1615118_+	pfam06570, DUF1129, Protein of unknown function (DUF1129)	NA|80aa|down_0|NC_018526.1_1615507_1615747_-	PRK00391, rpsR, 30S ribosomal protein S18; Reviewed	NA|165aa|down_1|NC_018526.1_1615779_1616274_-	PRK07275, PRK07275, single-stranded DNA-binding protein; Provisional	NA|97aa|down_2|NC_018526.1_1616285_1616576_-	PRK00453, rpsF, 30S ribosomal protein S6; Reviewed	NA|388aa|down_3|NC_018526.1_1616815_1617979_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|330aa|down_4|NC_018526.1_1618297_1619287_-	TIGR00545, Probable_lipoate-protein_ligase_A, lipoyltransferase and lipoate-protein ligase	NA|397aa|down_5|NC_018526.1_1619416_1620607_+	NA	NA|587aa|down_6|NC_018526.1_1620658_1622419_-	TIGR01350, Dihydrolipoyl_dehydrogenase, dihydrolipoamide dehydrogenase	NA|463aa|down_7|NC_018526.1_1622692_1624081_-	PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed	NA|332aa|down_8|NC_018526.1_1624421_1625417_-	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]	NA|323aa|down_9|NC_018526.1_1625703_1626672_-	cd02000, TPP_E1_PDC_ADC_BCADC, Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC)
GCF_000294495.1_ASM29449v1	NC_018526	Streptococcus suis S735, complete sequence	5	1659669-1659792	4	CRISPRCasFinder	no		cas3,PrimPol,DinG,csa3,DEDDh	Orphan	CCAATCAACCACTACTGCGCTAAGATGTTGAC	32	0	0	NA	NA	NA	1	1	Orphan	cas3,PrimPol,DinG,csa3,DEDDh	NA,NA|70aa|down_5|NC_018526.1_1665373_1665583_-	NA|319aa|up_9|NC_018526.1_1647157_1648114_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|314aa|up_8|NC_018526.1_1648115_1649057_-	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|333aa|up_7|NC_018526.1_1649059_1650058_-	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|597aa|up_6|NC_018526.1_1650443_1652234_-	cd08510, PBP2_Lactococcal_OppA_like, The substrate binding component of an ABC-type lactococcal OppA-like transport system contains	NA|417aa|up_5|NC_018526.1_1652446_1653697_+	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane]	NA|472aa|up_4|NC_018526.1_1653941_1655357_-	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB	NA|147aa|up_3|NC_018526.1_1655706_1656147_-	TIGR01994, Iron-sulfur_cluster_assembly_scaffold_protein_IscU, SUF system FeS assembly protein, NifU family	NA|408aa|up_2|NC_018526.1_1656133_1657357_-	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily	NA|421aa|up_1|NC_018526.1_1657360_1658623_-	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]	NA|258aa|up_0|NC_018526.1_1658639_1659413_-	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]	NA|391aa|down_0|NC_018526.1_1659965_1661138_-	cd06853, GT_WecA_like, This subfamily contains Escherichia coli WecA, Bacillus subtilis TagO and related proteins	NA|241aa|down_1|NC_018526.1_1661134_1661857_-	PRK02315, PRK02315, adaptor protein MecA	NA|279aa|down_2|NC_018526.1_1661984_1662821_-	PRK00281, PRK00281, undecaprenyl-diphosphate phosphatase	NA|522aa|down_3|NC_018526.1_1662947_1664513_+	cd13627, PBP2_AA_binding_like_2, Substrate-binding domain of putative amino acid-binding protein; the type 2 periplasmic-binding protein fold	NA|248aa|down_4|NC_018526.1_1664505_1665249_+	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|70aa|down_5|NC_018526.1_1665373_1665583_-	NA	NA|301aa|down_6|NC_018526.1_1665668_1666571_-	cd03407, SPFH_like_u4, Uncharacterized family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily	NA|417aa|down_7|NC_018526.1_1666580_1667831_-	PRK08639, PRK08639, threonine dehydratase; Validated	NA|341aa|down_8|NC_018526.1_1668113_1669136_-	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional	NA|159aa|down_9|NC_018526.1_1669276_1669753_-	PRK11895, ilvH, acetolactate synthase 3 regulatory subunit; Reviewed
