The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_018513	Burkholderia cepacia GG4 chromosome 1, complete sequence	3463655	2693885	2702190	3463655		Yaba_monkey_tumor_virus(16.67%)	8	NA	NA
WP_041490682.1|2693885_2694806_+	alpha/beta hydrolase	NA	Q6TUZ7	Yaba_monkey_tumor_virus	27.2	5.7e-16
WP_014897718.1|2694837_2695761_-	histone deacetylase family protein	NA	A0A2K9KZC4	Tupanvirus	34.6	6.7e-41
WP_041490683.1|2695929_2697153_+	lytic murein transglycosylase B	NA	NA	NA	NA	NA
WP_014897720.1|2697234_2698137_-	cysteine synthase CysM	NA	A0A1X9I5F1	Streptococcus_phage	39.5	1.2e-50
WP_014897721.1|2698356_2698701_-	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
WP_014897722.1|2698774_2699767_-	ADP-glyceromanno-heptose 6-epimerase	NA	R9S880	Prochlorococcus_phage	31.5	2.0e-27
WP_148283823.1|2699831_2700782_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	NA	A0A2H4N7X4	Lake_Baikal_phage	28.5	1.1e-17
WP_014897724.1|2700789_2702190_-	UDP-glucose/GDP-mannose dehydrogenase family protein	NA	A0A127AXI2	Bacillus_phage	37.8	5.7e-76
>prophage 2
NC_018513	Burkholderia cepacia GG4 chromosome 1, complete sequence	3463655	2783884	2794380	3463655	tRNA	Bacillus_virus(33.33%)	9	NA	NA
WP_014897795.1|2783884_2785186_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	51.1	1.6e-93
WP_014897796.1|2785436_2785709_+	DUF2164 domain-containing protein	NA	NA	NA	NA	NA
WP_014897797.1|2785751_2787062_-	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	40.5	1.9e-81
WP_014897798.1|2787223_2787913_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_014897799.1|2787959_2790269_-	DNA translocase FtsK	NA	G1FGP1	Mycobacterium_phage	49.7	1.2e-83
WP_014897800.1|2790676_2791639_+	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	42.6	3.0e-60
WP_014897801.1|2791774_2792554_+	Smr/MutS family protein	NA	A0A0P0IDT4	Acinetobacter_phage	29.8	5.0e-13
WP_014897802.1|2792513_2793164_+	trimeric intracellular cation channel family protein	NA	NA	NA	NA	NA
WP_014897803.1|2793261_2794380_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	35.5	1.8e-24
>prophage 3
NC_018513	Burkholderia cepacia GG4 chromosome 1, complete sequence	3463655	2887794	2894791	3463655		Escherichia_phage(33.33%)	7	NA	NA
WP_014897887.1|2887794_2889015_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.4	1.9e-11
WP_014897888.1|2889014_2889809_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_041490689.1|2889808_2891254_-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	29.1	5.7e-55
WP_014897890.1|2891393_2892296_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	35.3	1.2e-26
WP_014897891.1|2892288_2892840_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	51.9	2.6e-48
WP_014897892.1|2892824_2893718_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	A0A291LA53	Escherichia_phage	59.6	9.8e-98
WP_014897893.1|2893729_2894791_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	47.9	6.0e-86
>prophage 4
NC_018513	Burkholderia cepacia GG4 chromosome 1, complete sequence	3463655	3025062	3034095	3463655		unidentified_phage(16.67%)	7	NA	NA
WP_014898001.1|3025062_3026598_+	polynucleotide adenylyltransferase PcnB	NA	H7BUW3	unidentified_phage	30.7	1.8e-22
WP_014898002.1|3026633_3027176_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_014898003.1|3027172_3027859_+	deoxynucleoside kinase	NA	A0A0M3UL55	Enterococcus_phage	26.4	1.2e-07
WP_014898004.1|3027903_3028719_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	33.3	1.5e-36
WP_014898005.1|3028840_3030757_-	aminodeoxychorismate synthase component I	NA	S4VNU7	Pandoravirus	38.0	5.6e-58
WP_014898006.1|3030761_3031898_-	molecular chaperone DnaJ	NA	E3T4P7	Cafeteria_roenbergensis_virus	38.4	1.7e-22
WP_014898007.1|3032151_3034095_-	molecular chaperone DnaK	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	49.7	3.2e-146
>prophage 5
NC_018513	Burkholderia cepacia GG4 chromosome 1, complete sequence	3463655	3292854	3348770	3463655	transposase,plate,tRNA	Stx2-converting_phage(33.33%)	48	NA	NA
WP_014898230.1|3292854_3294153_+|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
WP_014898231.1|3294234_3295317_+	peptide chain release factor 1	NA	A0A0S4KWG0	Pseudomonas_phage	46.6	6.7e-08
WP_014898232.1|3295324_3296167_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_006477066.1|3296234_3296546_+	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA	NA
WP_014898233.1|3296559_3297156_+	UbiX family flavin prenyltransferase	NA	NA	NA	NA	NA
WP_014898234.1|3297378_3298170_+	dioxygenase	NA	NA	NA	NA	NA
WP_014898235.1|3298277_3299876_-	APC family permease	NA	NA	NA	NA	NA
WP_006477070.1|3300296_3300500_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	71.6	1.4e-20
WP_041490562.1|3300608_3301859_-	Hsp70 family protein	NA	NA	NA	NA	NA
WP_014898237.1|3302052_3302658_-	nitroreductase family protein	NA	NA	NA	NA	NA
WP_014898238.1|3302815_3304099_-	MFS transporter	NA	NA	NA	NA	NA
WP_014898239.1|3304318_3304942_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014898240.1|3305018_3305591_+	DUF1415 domain-containing protein	NA	NA	NA	NA	NA
WP_014898241.1|3305646_3306537_-	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_014898242.1|3306626_3307760_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_014898243.1|3307895_3308390_-	LEA type 2 family protein	NA	NA	NA	NA	NA
WP_014898244.1|3309031_3311215_+	peptidase M1	NA	A0A0P0IY26	Acinetobacter_phage	26.4	7.5e-51
WP_014898245.1|3311400_3312429_-	transporter	NA	NA	NA	NA	NA
WP_014898246.1|3312637_3313591_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014898247.1|3313712_3314558_+	M15 family metallopeptidase	NA	NA	NA	NA	NA
WP_014898248.1|3314858_3318800_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
WP_014898249.1|3318796_3319786_+	type VI secretion system-associated protein TagF	NA	NA	NA	NA	NA
WP_014898250.1|3319790_3320747_+	OmpA family protein	NA	NA	NA	NA	NA
WP_014898251.1|3320824_3321946_-	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_014898252.1|3321985_3324655_-	type VI secretion system ATPase TssH	NA	A0A223W0B1	Agrobacterium_phage	31.6	2.2e-89
WP_014898253.1|3324699_3325800_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_014898254.1|3325763_3327599_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_014898255.1|3327676_3328162_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_006477093.1|3328224_3328728_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
WP_014898256.1|3328798_3330289_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_014898257.1|3330304_3330820_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_014898258.1|3330864_3331503_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_039320279.1|3331881_3332493_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_014898260.1|3332595_3333942_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_014898261.1|3333938_3334721_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_014898262.1|3334807_3335125_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014898263.1|3335464_3336265_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_014898264.1|3336346_3336550_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014898266.1|3337699_3340015_-	PriCT-2 domain-containing protein	NA	A0A0M7RDT6	Lactobacillus_phage	39.0	1.0e-50
WP_014898267.1|3340196_3340391_-	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
WP_014898268.1|3340801_3343042_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014898269.1|3343162_3343984_+	DUF2971 domain-containing protein	NA	NA	NA	NA	NA
WP_014898271.1|3344344_3345352_-	hypothetical protein	NA	NA	NA	NA	NA
WP_187293234.1|3345417_3345588_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014898272.1|3345891_3346377_+	recombinase family protein	NA	A0A1S6L009	Salmonella_phage	39.9	6.0e-17
WP_041490564.1|3346426_3346813_+|transposase	transposase	transposase	A0A0P0ZBP6	Stx2-converting_phage	35.3	2.9e-14
WP_014898274.1|3346809_3347157_+	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZBY2	Stx2-converting_phage	71.0	5.6e-41
WP_014898275.1|3347186_3348770_+|transposase	IS66 family transposase	transposase	A0A0P0ZBS5	Stx2-converting_phage	60.3	2.6e-146
>prophage 1
NC_018514	Burkholderia cepacia GG4 chromosome 2, complete sequence	3003666	903600	971191	3003666	portal,integrase,head,capsid,tail,terminase,holin	Burkholderia_phage(52.27%)	71	913699:913716	980498:980515
WP_041490941.1|903600_904794_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_014899162.1|905262_906438_-	LuxR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014899163.1|906675_907056_+	DUF4377 domain-containing protein	NA	NA	NA	NA	NA
WP_014899164.1|907078_908467_-	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_014899165.1|908631_909492_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014899166.1|909603_909954_-	VOC family protein	NA	NA	NA	NA	NA
WP_014899167.1|910213_911353_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014899168.1|911522_912716_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_014899169.1|912726_914487_+	FAD-binding protein	NA	NA	NA	NA	NA
913699:913716	attL	GGCGCGCCGACGGTCGGC	NA	NA	NA	NA
WP_014899170.1|914483_915002_+	flavin reductase family protein	NA	NA	NA	NA	NA
WP_014899171.1|915041_915233_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041490943.1|915255_916299_+	ferredoxin--NADP reductase	NA	NA	NA	NA	NA
WP_187293272.1|916351_917932_+	fatty acid--CoA ligase family protein	NA	A0A1V0SBX8	Catovirus	26.0	2.3e-09
WP_014899174.1|917964_918738_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_014899175.1|919528_920206_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014899176.1|920483_920720_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_014899177.1|920783_921863_-|integrase	phage integrase Arm DNA-binding domain-containing protein	integrase	K7P6P6	Enterobacteria_phage	32.1	1.6e-38
WP_041490754.1|921862_922054_-	excisionase	NA	NA	NA	NA	NA
WP_014899179.1|922112_922751_-	hypothetical protein	NA	A0A059VF56	Pseudomonas_phage	39.6	4.8e-30
WP_148283870.1|922749_923286_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014899181.1|923319_924018_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014899182.1|924036_924894_-	hypothetical protein	NA	A0A2H4J418	uncultured_Caudovirales_phage	48.3	4.4e-71
WP_014899183.1|925090_925735_+	hypothetical protein	NA	Q8W6Q5	Burkholderia_virus	38.5	4.1e-13
WP_014899185.1|925996_926290_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041490755.1|927463_931351_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014899188.1|931517_932666_+	restriction endonuclease	NA	NA	NA	NA	NA
WP_041490756.1|933265_933646_-	helix-turn-helix domain-containing protein	NA	G3EN81	Psychrobacter_phage	42.0	1.7e-06
WP_014899190.1|934005_934257_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041490947.1|934418_934700_+	hypothetical protein	NA	A0A1S5NNI6	Burkholderia_phage	53.6	1.0e-16
WP_014899193.1|934957_935254_+	hypothetical protein	NA	A1YZR1	Burkholderia_virus	51.1	4.2e-21
WP_014899194.1|935274_936129_+	hypothetical protein	NA	Q8W6P2	Burkholderia_virus	73.7	2.3e-104
WP_014899195.1|936125_937133_+	helix-turn-helix domain-containing protein	NA	Q8W6P0	Burkholderia_virus	62.3	1.1e-97
WP_014899196.1|937302_937866_+	hypothetical protein	NA	Q3HQZ9	Burkholderia_phage	85.6	5.8e-88
WP_148283872.1|937880_938198_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014899198.1|938194_938638_+	DUF1364 family protein	NA	Q3HR02	Burkholderia_phage	81.0	8.1e-69
WP_041490758.1|938640_938973_+	hypothetical protein	NA	Q3HR03	Burkholderia_phage	63.9	8.2e-34
WP_014899200.1|938969_939218_+	hypothetical protein	NA	Q3HR04	Burkholderia_phage	87.8	7.0e-38
WP_014899201.1|939261_939687_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080599505.1|939902_940742_-	two pore domain potassium channel family protein	NA	NA	NA	NA	NA
WP_014899203.1|941275_942211_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014899204.1|942504_942861_+	HNH endonuclease	NA	Q8W6N0	Burkholderia_virus	84.7	4.8e-56
WP_014899205.1|943007_943493_+|terminase	phage terminase small subunit P27 family	terminase	Q8W6V0	Burkholderia_virus	96.9	1.6e-86
WP_014899206.1|943502_945215_+|terminase	terminase large subunit	terminase	Q8W6U9	Burkholderia_virus	96.5	0.0e+00
WP_014899207.1|945211_945397_+	hypothetical protein	NA	A4JWZ8	Burkholderia_virus	85.2	1.9e-16
WP_014899208.1|945401_946661_+|portal	phage portal protein	portal	A4JWZ9	Burkholderia_virus	92.8	6.6e-225
WP_014899209.1|946657_947626_+	S49 family peptidase	NA	A4JX00	Burkholderia_virus	90.7	1.6e-154
WP_014899210.1|947728_949036_+|capsid	phage major capsid protein	capsid	A4JX01	Burkholderia_virus	85.1	7.6e-200
WP_014899211.1|949095_949281_+	hypothetical protein	NA	Q8W6U4	Burkholderia_virus	62.3	9.9e-13
WP_014899212.1|949287_949854_+	hypothetical protein	NA	A4JX03	Burkholderia_virus	73.9	1.9e-75
WP_014899213.1|949853_950180_+|head	phage head closure protein	head	A4JX04	Burkholderia_virus	87.0	4.3e-51
WP_014899214.1|950172_950595_+	HK97 gp10 family phage protein	NA	C7BGH3	Burkholderia_phage	89.9	1.6e-58
WP_014899215.1|950591_950933_+	DUF3168 domain-containing protein	NA	Q3HQT5	Burkholderia_phage	74.6	7.4e-38
WP_014899216.1|950990_951455_+	hypothetical protein	NA	Q3HQT6	Burkholderia_phage	87.0	4.2e-68
WP_014899217.1|951486_951951_+|tail	tail assembly protein	tail	Q3HQT7	Burkholderia_phage	70.6	1.1e-57
WP_041490762.1|951947_952226_+	DUF4035 domain-containing protein	NA	Q3HQT8	Burkholderia_phage	87.0	2.3e-37
WP_014899219.1|952239_956340_+|tail	phage tail tape measure protein	tail	C7BGC8	Burkholderia_phage	90.2	0.0e+00
WP_014899220.1|956339_956678_+|tail	phage tail protein	tail	C7BGC9	Burkholderia_phage	82.1	7.1e-49
WP_014899221.1|956686_958189_+	hypothetical protein	NA	C7BGD0	Burkholderia_phage	36.2	8.6e-38
WP_014899222.1|958188_958872_+|tail	phage minor tail protein L	tail	C7BGD1	Burkholderia_phage	87.7	9.4e-117
WP_014899223.1|958920_959673_+	C40 family peptidase	NA	C7BGD2	Burkholderia_phage	89.2	1.5e-136
WP_014899224.1|959669_960233_+|tail	tail assembly protein	tail	C7BGD3	Burkholderia_phage	92.0	6.2e-90
WP_080599506.1|963724_965467_+	DUF1983 domain-containing protein	NA	Q3HQU5	Burkholderia_phage	91.2	1.1e-73
WP_014899226.1|965466_965775_+	hypothetical protein	NA	Q3HQU6	Burkholderia_phage	84.3	1.1e-45
WP_014899227.1|965774_966491_+	hypothetical protein	NA	C7BGD6	Burkholderia_phage	76.9	1.1e-107
WP_014899228.1|966549_966843_+|holin	phage holin family protein	holin	C7BGD7	Burkholderia_phage	89.2	4.1e-37
WP_014899229.1|966835_967255_+	glycoside hydrolase family protein	NA	A0A1Q1PW74	Pseudoalteromonas_phage	43.2	2.8e-23
WP_041490765.1|967251_967734_+	DUF2514 family protein	NA	C7BGD9	Burkholderia_phage	53.8	1.7e-35
WP_014899231.1|967880_969035_+	HNH endonuclease	NA	NA	NA	NA	NA
WP_148283924.1|969117_969366_-	hypothetical protein	NA	C7BGE3	Burkholderia_phage	46.3	4.9e-15
WP_014899233.1|969493_969898_+	SOS response-associated peptidase family protein	NA	C7BGE4	Burkholderia_phage	84.5	1.9e-64
WP_014899234.1|970270_971191_+	trypsin-like peptidase domain-containing protein	NA	A0A2H4JE36	uncultured_Caudovirales_phage	40.0	1.5e-32
980498:980515	attR	GCCGACCGTCGGCGCGCC	NA	NA	NA	NA
