assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000287215.2_ASM28721v3	NZ_CP007567	Aeromonas media WS chromosome, complete genome	1	2713-2809	1	CRISPRCasFinder	no		DEDDh,csa3,c2c9_V-U4,cas14j,WYL,DinG,cas3	Orphan	GGAGGACATCGGCAAGGTGTTCA	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,c2c9_V-U4,cas14j,WYL,DinG,cas3	NA,NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|413aa|up_0|NZ_CP007567.1_427_1666_-	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms]	NA|173aa|down_0|NZ_CP007567.1_2840_3359_-	cd14505, CDKN3-like, cyclin-dependent kinase inhibitor 3 and similar proteins	NA|157aa|down_1|NZ_CP007567.1_3519_3990_+	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|355aa|down_2|NZ_CP007567.1_4110_5175_-	pfam11301, DUF3103, Protein of unknown function (DUF3103)	NA|384aa|down_3|NZ_CP007567.1_5322_6474_-	pfam03594, BenE, Benzoate membrane transport protein	NA|190aa|down_4|NZ_CP007567.1_6589_7159_+	cd02209, cupin_XRE_C, XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain	NA|399aa|down_5|NZ_CP007567.1_7162_8359_-	pfam05940, NnrS, NnrS protein	NA|106aa|down_6|NZ_CP007567.1_14399_14717_+	PRK05423, PRK05423, DUF496 family protein	NA|1028aa|down_7|NZ_CP007567.1_14931_18015_+	COG0744, MrcB, Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane]	NA|175aa|down_8|NZ_CP007567.1_18082_18607_-	PRK05255, PRK05255, ribosome-associated protein	NA|448aa|down_9|NZ_CP007567.1_18718_20062_+	PRK11040, PRK11040, peptidase PmbA; Provisional
GCF_000287215.2_ASM28721v3	NZ_CP007567	Aeromonas media WS chromosome, complete genome	2	1044390-1044486	2	CRISPRCasFinder	no	cas14j	DEDDh,csa3,c2c9_V-U4,cas14j,WYL,DinG,cas3	Unclear	GCTCAAGGGCTGATACCCCGCCAGCG	26	0	0	NA	NA	NA	1	1	TypeV	DEDDh,csa3,c2c9_V-U4,cas14j,WYL,DinG,cas3	NA,NA	NA|303aa|up_9|NZ_CP007567.1_1033264_1034173_-	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|148aa|up_8|NZ_CP007567.1_1034293_1034737_+	COG2128, COG2128, Uncharacterized conserved protein [Function unknown]	NA|316aa|up_7|NZ_CP007567.1_1035194_1036142_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|366aa|up_6|NZ_CP007567.1_1036341_1037439_+	pfam13808, DDE_Tnp_1_assoc, DDE_Tnp_1-associated	NA|358aa|up_5|NZ_CP007567.1_1037546_1038620_+	PRK10525, PRK10525, cytochrome o ubiquinol oxidase subunit II; Provisional	NA|659aa|up_4|NZ_CP007567.1_1038623_1040600_+	TIGR02843, Cytochrome_bo3_ubiquinol_oxidase_subunit_1, cytochrome o ubiquinol oxidase, subunit I	NA|232aa|up_3|NZ_CP007567.1_1040520_1041216_+	PRK10663, PRK10663, cytochrome o ubiquinol oxidase subunit III; Provisional	NA|110aa|up_2|NZ_CP007567.1_1041215_1041545_+	PRK10582, PRK10582, cytochrome o ubiquinol oxidase subunit IV; Provisional	NA|297aa|up_1|NZ_CP007567.1_1041558_1042449_+	PRK13362, PRK13362, protoheme IX farnesyltransferase; Provisional	NA|454aa|up_0|NZ_CP007567.1_1042614_1043976_+	cd17472, MFS_YajR_like, Escherichia coli inner membrane transport protein YajR and similar multidrug-efflux transporters of the Major Facilitator Superfamily	NA|446aa|down_0|NZ_CP007567.1_1044537_1045875_-	pfam13006, Nterm_IS4, Insertion element 4 transposase N-terminal	NA|368aa|down_1|NZ_CP007567.1_1045998_1047102_-	cd06259, YdcF-like, YdcF-like	NA|298aa|down_2|NZ_CP007567.1_1047251_1048145_-	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|163aa|down_3|NZ_CP007567.1_1048245_1048734_+	pfam04657, DMT_YdcZ, Putative inner membrane exporter, YdcZ	NA|143aa|down_4|NZ_CP007567.1_1048744_1049173_+	pfam04657, DMT_YdcZ, Putative inner membrane exporter, YdcZ	NA|81aa|down_5|NZ_CP007567.1_1049451_1049694_-	pfam11730, DUF3297, Protein of unknown function (DUF3297)	NA|439aa|down_6|NZ_CP007567.1_1049792_1051109_-	cd17809, HipA_So_like, type II toxin-antitoxin sytem toxin HipA from Shewanella oneidensis and similar proteins	NA|99aa|down_7|NZ_CP007567.1_1051092_1051389_-	TIGR03070, couple_hipB, transcriptional regulator, y4mF family	NA|376aa|down_8|NZ_CP007567.1_1051918_1053046_-	pfam13808, DDE_Tnp_1_assoc, DDE_Tnp_1-associated	NA|316aa|down_9|NZ_CP007567.1_1053185_1054133_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]
GCF_000287215.2_ASM28721v3	NZ_CP007567	Aeromonas media WS chromosome, complete genome	3	1226636-1226737	3	CRISPRCasFinder	no		DEDDh,csa3,c2c9_V-U4,cas14j,WYL,DinG,cas3	Orphan	GTCCGCCGTTCTACCGACTGAACTA	25	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,c2c9_V-U4,cas14j,WYL,DinG,cas3	NA|187aa|up_9|NZ_CP007567.1_1215268_1215829_-,NA|150aa|up_5|NZ_CP007567.1_1221277_1221727_-,NA|278aa|down_1|NZ_CP007567.1_1229021_1229855_-,NA|171aa|down_3|NZ_CP007567.1_1231697_1232210_-,NA|162aa|down_7|NZ_CP007567.1_1236794_1237280_-,NA|175aa|down_8|NZ_CP007567.1_1237299_1237824_-	NA|187aa|up_9|NZ_CP007567.1_1215268_1215829_-	NA	NA|475aa|up_8|NZ_CP007567.1_1215969_1217394_-	PRK07208, PRK07208, hypothetical protein; Provisional	NA|275aa|up_7|NZ_CP007567.1_1217479_1218304_-	TIGR00145, Uncharacterized_protein_slr0964, FTR1 family protein	NA|990aa|up_6|NZ_CP007567.1_1218303_1221273_-	cd14962, NHL_like_6, Uncharacterized NHL-repeat domain in bacterial proteins	NA|150aa|up_5|NZ_CP007567.1_1221277_1221727_-	NA	NA|162aa|up_4|NZ_CP007567.1_1221850_1222336_-	PRK05208, PRK05208, hypothetical protein; Provisional	NA|234aa|up_3|NZ_CP007567.1_1222418_1223120_-	cd03765, proteasome_beta_bacterial, Bacterial proteasome, beta subunit	NA|267aa|up_2|NZ_CP007567.1_1223136_1223937_-	COG1305, COG1305, Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism]	NA|309aa|up_1|NZ_CP007567.1_1223933_1224860_-	pfam04168, Alpha-E, A predicted alpha-helical domain with a conserved ER motif	NA|479aa|up_0|NZ_CP007567.1_1224853_1226290_-	COG2308, COG2308, Uncharacterized conserved protein [Function unknown]	NA|538aa|down_0|NZ_CP007567.1_1227204_1228818_-	COG5421, COG5421, Transposase [DNA replication, recombination, and repair]	NA|278aa|down_1|NZ_CP007567.1_1229021_1229855_-	NA	NA|594aa|down_2|NZ_CP007567.1_1229851_1231633_-	pfam03175, DNA_pol_B_2, DNA polymerase type B, organellar and viral	NA|171aa|down_3|NZ_CP007567.1_1231697_1232210_-	NA	NA|316aa|down_4|NZ_CP007567.1_1232525_1233473_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|409aa|down_5|NZ_CP007567.1_1234748_1235975_-	cd00796, INT_Rci_Hp1_C, Shufflon-specific DNA recombinase Rci and Bacteriophage Hp1_like integrase, C-terminal catalytic domain	NA|149aa|down_6|NZ_CP007567.1_1236281_1236728_-	pfam10980, DUF2787, Protein of unknown function (DUF2787)	NA|162aa|down_7|NZ_CP007567.1_1236794_1237280_-	NA	NA|175aa|down_8|NZ_CP007567.1_1237299_1237824_-	NA	NA|316aa|down_9|NZ_CP007567.1_1238073_1239021_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]
GCF_000287215.2_ASM28721v3	NZ_CP007567	Aeromonas media WS chromosome, complete genome	4	2436083-2436206	4	CRISPRCasFinder	no	cas14j	DEDDh,csa3,c2c9_V-U4,cas14j,WYL,DinG,cas3	Unclear	CTAGCCAAAGCGCAGGATTACACCAAGCGTTGCCAT	36	0	0	NA	NA	NA	1	1	TypeV	DEDDh,csa3,c2c9_V-U4,cas14j,WYL,DinG,cas3	NA|119aa|up_8|NZ_CP007567.1_2425965_2426322_-,NA	NA|101aa|up_9|NZ_CP007567.1_2425670_2425973_-	COG3339, COG3339, Uncharacterized conserved protein [Function unknown]	NA|119aa|up_8|NZ_CP007567.1_2425965_2426322_-	NA	NA|402aa|up_7|NZ_CP007567.1_2426469_2427675_-	cd00796, INT_Rci_Hp1_C, Shufflon-specific DNA recombinase Rci and Bacteriophage Hp1_like integrase, C-terminal catalytic domain	NA|185aa|up_6|NZ_CP007567.1_2428518_2429073_-	PRK10832, PRK10832, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA|618aa|up_5|NZ_CP007567.1_2429366_2431220_-	PRK00558, uvrC, excinuclease ABC subunit UvrC	NA|215aa|up_4|NZ_CP007567.1_2431331_2431976_-	PRK09483, PRK09483, response regulator; Provisional	NA|250aa|up_3|NZ_CP007567.1_2432186_2432936_-	PRK05450, PRK05450, 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional	NA|67aa|up_2|NZ_CP007567.1_2432932_2433133_-	COG2835, COG2835, Uncharacterized conserved protein [Function unknown]	NA|332aa|up_1|NZ_CP007567.1_2433283_2434279_-	PRK00652, lpxK, tetraacyldisaccharide 4'-kinase; Reviewed	NA|590aa|up_0|NZ_CP007567.1_2434278_2436048_-	PRK11176, PRK11176, lipid A ABC transporter ATP-binding protein/permease MsbA	NA|477aa|down_0|NZ_CP007567.1_2439804_2441234_-	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|400aa|down_1|NZ_CP007567.1_2441742_2442942_-	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed	NA|157aa|down_2|NZ_CP007567.1_2443268_2443739_-	pfam04074, DUF386, Domain of unknown function (DUF386)	NA|369aa|down_3|NZ_CP007567.1_2444039_2445146_-	pfam01553, Acyltransferase, Acyltransferase	NA|184aa|down_4|NZ_CP007567.1_2445355_2445907_-	PRK10809, PRK10809, 30S ribosomal protein S5 alanine N-acetyltransferase	NA|473aa|down_5|NZ_CP007567.1_2446264_2447683_+	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|473aa|down_6|NZ_CP007567.1_2449177_2450596_+	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|559aa|down_7|NZ_CP007567.1_2451087_2452764_-	PRK10947, PRK10947, DNA-binding transcriptional regulator H-NS	NA|388aa|down_8|NZ_CP007567.1_2452779_2453943_-	cd18807, SF1_C_UvrD, C-terminal helicase domain of UvrD family helicases	NA|995aa|down_9|NZ_CP007567.1_2453972_2456957_-	cd10170, HSP70_NBD, Nucleotide-binding domain of the HSP70 family
GCF_000287215.2_ASM28721v3	NZ_CP007567	Aeromonas media WS chromosome, complete genome	5	2506924-2507046	5	CRISPRCasFinder	no	DinG	DEDDh,csa3,c2c9_V-U4,cas14j,WYL,DinG,cas3	Type IV-A	TTACAGCACCTTGGCGATGGCATCGCACAGGGGATCTAT	39	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,c2c9_V-U4,cas14j,WYL,DinG,cas3	NA|99aa|up_8|NZ_CP007567.1_2497064_2497361_+,NA|228aa|down_9|NZ_CP007567.1_2520416_2521100_+	NA|95aa|up_9|NZ_CP007567.1_2496699_2496984_-	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning]	NA|99aa|up_8|NZ_CP007567.1_2497064_2497361_+	NA	NA|81aa|up_7|NZ_CP007567.1_2497394_2497637_-	PRK11235, PRK11235, type II toxin-antitoxin system RelB/DinJ family antitoxin	NA|473aa|up_6|NZ_CP007567.1_2498880_2500299_+	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|521aa|up_5|NZ_CP007567.1_2500420_2501982_+	pfam00665, rve, Integrase core domain	NA|277aa|up_4|NZ_CP007567.1_2501911_2502742_-	PRK11539, PRK11539, ComEC family competence protein; Provisional	NA|173aa|up_3|NZ_CP007567.1_2502770_2503289_+	pfam09835, DUF2062, Uncharacterized protein conserved in bacteria (DUF2062)	NA|165aa|up_2|NZ_CP007567.1_2503282_2503777_+	pfam09835, DUF2062, Uncharacterized protein conserved in bacteria (DUF2062)	NA|502aa|up_1|NZ_CP007567.1_2503903_2505409_+	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|446aa|up_0|NZ_CP007567.1_2505457_2506795_-	pfam13006, Nterm_IS4, Insertion element 4 transposase N-terminal	NA|314aa|down_0|NZ_CP007567.1_2508343_2509285_-	PRK06298, PRK06298, type III secretion system protein; Validated	NA|346aa|down_1|NZ_CP007567.1_2509487_2510525_-	COG3203, OmpC, Outer membrane protein (porin) [Cell envelope biogenesis, outer membrane]	DinG|691aa|down_2|NZ_CP007567.1_2510910_2512983_+	PRK11747, dinG, ATP-dependent DNA helicase DinG; Provisional	NA|220aa|down_3|NZ_CP007567.1_2513127_2513787_+	pfam09829, DUF2057, Uncharacterized protein conserved in bacteria (DUF2057)	NA|299aa|down_4|NZ_CP007567.1_2513860_2514757_+	cd09993, HDAC_classIV, Histone deacetylase class IV also known as histone deacetylase 11	NA|383aa|down_5|NZ_CP007567.1_2514916_2516065_-	PRK03633, PRK03633, putative MFS family transporter protein; Provisional	NA|317aa|down_6|NZ_CP007567.1_2516306_2517257_-	PRK09563, rbgA, GTPase YlqF; Reviewed	NA|464aa|down_7|NZ_CP007567.1_2517583_2518975_+	COG1785, PhoA, Alkaline phosphatase [Inorganic ion transport and metabolism]	NA|456aa|down_8|NZ_CP007567.1_2518998_2520366_+	COG1785, PhoA, Alkaline phosphatase [Inorganic ion transport and metabolism]	NA|228aa|down_9|NZ_CP007567.1_2520416_2521100_+	NA
GCF_000287215.2_ASM28721v3	NZ_CP007567	Aeromonas media WS chromosome, complete genome	6	2540250-2540354	6	CRISPRCasFinder	no	c2c9_V-U4	DEDDh,csa3,c2c9_V-U4,cas14j,WYL,DinG,cas3	Type V-U4	ATGCCTTAGCCGTTGAACCGACCG	24	0	0	NA	NA	NA	1	1	TypeV-U4	DEDDh,csa3,c2c9_V-U4,cas14j,WYL,DinG,cas3	NA|181aa|up_2|NZ_CP007567.1_2537438_2537981_-,NA|47aa|down_5|NZ_CP007567.1_2548141_2548282_+	NA|263aa|up_9|NZ_CP007567.1_2529635_2530424_+	cd13629, PBP2_Dsm1740, Amino acid-binding domain of the type 2 periplasmic binding fold superfamily	NA|320aa|up_8|NZ_CP007567.1_2530521_2531481_+	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|248aa|up_7|NZ_CP007567.1_2531570_2532314_+	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|280aa|up_6|NZ_CP007567.1_2532514_2533354_+	COG3000, ERG3, Sterol desaturase [Lipid metabolism]	NA|443aa|up_5|NZ_CP007567.1_2533473_2534802_+	pfam13006, Nterm_IS4, Insertion element 4 transposase N-terminal	NA|467aa|up_4|NZ_CP007567.1_2534854_2536255_-	TIGR00905, Arginine/ornithine_antiporter, transporter, basic amino acid/polyamine antiporter (APA) family	NA|300aa|up_3|NZ_CP007567.1_2536264_2537164_-	pfam02574, S-methyl_trans, Homocysteine S-methyltransferase	NA|181aa|up_2|NZ_CP007567.1_2537438_2537981_-	NA	NA|440aa|up_1|NZ_CP007567.1_2538001_2539321_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|237aa|up_0|NZ_CP007567.1_2539513_2540224_-	PRK11115, PRK11115, phosphate signaling complex protein PhoU	NA|273aa|down_0|NZ_CP007567.1_2540395_2541214_-	PRK14236, PRK14236, phosphate transporter ATP-binding protein; Provisional	NA|550aa|down_1|NZ_CP007567.1_2541321_2542971_-	COG4985, COG4985, ABC-type phosphate transport system, auxiliary component [Inorganic ion transport and metabolism]	NA|746aa|down_2|NZ_CP007567.1_2542988_2545226_-	COG4590, COG4590, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|477aa|down_3|NZ_CP007567.1_2545410_2546840_+	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|180aa|down_4|NZ_CP007567.1_2546994_2547534_-	PRK10860, PRK10860, tRNA-specific adenosine deaminase; Provisional	NA|47aa|down_5|NZ_CP007567.1_2548141_2548282_+	NA	NA|536aa|down_6|NZ_CP007567.1_2548985_2550593_+	PRK09255, PRK09255, malate synthase; Validated	NA|438aa|down_7|NZ_CP007567.1_2550666_2551980_+	PRK15063, PRK15063, isocitrate lyase; Provisional	NA|446aa|down_8|NZ_CP007567.1_2552032_2553370_-	pfam13006, Nterm_IS4, Insertion element 4 transposase N-terminal	NA|248aa|down_9|NZ_CP007567.1_2553522_2554266_-	PRK08084, PRK08084, DnaA inactivator Hda
GCF_000287215.2_ASM28721v3	NZ_CP007567	Aeromonas media WS chromosome, complete genome	7	2819060-2819199	7	CRISPRCasFinder	no	c2c9_V-U4	DEDDh,csa3,c2c9_V-U4,cas14j,WYL,DinG,cas3	Type V-U4	TCAGCCTCCGGTCGTTACTGGAAGGAGAGGGAAGAAGGCGGC	42	0	0	NA	NA	NA	1	1	TypeV-U4	DEDDh,csa3,c2c9_V-U4,cas14j,WYL,DinG,cas3	NA,NA	NA|577aa|up_9|NZ_CP007567.1_2808284_2810015_+	PRK13506, PRK13506, formate--tetrahydrofolate ligase; Provisional	NA|550aa|up_8|NZ_CP007567.1_2810087_2811737_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|219aa|up_7|NZ_CP007567.1_2812006_2812663_-	PRK09347, folE, GTP cyclohydrolase I; Provisional	NA|411aa|up_6|NZ_CP007567.1_2813015_2814248_+	PRK10680, PRK10680, molybdopterin biosynthesis protein MoeA; Provisional	NA|252aa|up_5|NZ_CP007567.1_2814244_2815000_+	PRK05690, PRK05690, molybdopterin biosynthesis protein MoeB; Provisional	NA|260aa|up_4|NZ_CP007567.1_2815065_2815845_-	TIGR03611, RutD, pyrimidine utilization protein D	NA|352aa|up_3|NZ_CP007567.1_2815915_2816971_-	TIGR02142, Molybdenum_import_ATP-binding_protein_ModC, molybdenum ABC transporter, ATP-binding protein	NA|227aa|up_2|NZ_CP007567.1_2816967_2817648_-	COG4149, ModC, ABC-type molybdate transport system, permease component [Inorganic ion transport and metabolism]	NA|243aa|up_1|NZ_CP007567.1_2817757_2818486_-	cd13539, PBP2_AvModA, Substrate binding domain of ModA/WtpA from Azotobacter vinelandii and its closest homologs;the type 2 periplasmic binding protein fold	NA|162aa|up_0|NZ_CP007567.1_2818570_2819056_-	PRK10678, moaE, molybdopterin synthase catalytic subunit MoaE	NA|82aa|down_0|NZ_CP007567.1_2819255_2819501_-	PRK11130, moaD, molybdopterin synthase small subunit; Provisional	NA|165aa|down_1|NZ_CP007567.1_2819497_2819992_-	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC	NA|176aa|down_2|NZ_CP007567.1_2820073_2820601_-	TIGR02667, Molybdenum_cofactor_biosynthesis_protein_B	NA|197aa|down_3|NZ_CP007567.1_2820822_2821413_-	TIGR02161, Cytochrome_c-type_protein_NapC, periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family	NA|152aa|down_4|NZ_CP007567.1_2821424_2821880_-	pfam03892, NapB, Nitrate reductase cytochrome c-type subunit (NapB)	NA|292aa|down_5|NZ_CP007567.1_2821879_2822755_-	PRK09477, napH, quinol dehydrogenase membrane component; Provisional	NA|245aa|down_6|NZ_CP007567.1_2822751_2823486_-	PRK09476, napG, quinol dehydrogenase periplasmic component; Provisional	NA|830aa|down_7|NZ_CP007567.1_2823499_2825989_-	PRK13532, PRK13532, nitrate reductase catalytic subunit NapA	NA|89aa|down_8|NZ_CP007567.1_2826115_2826382_-	pfam03927, NapD, NapD protein	NA|170aa|down_9|NZ_CP007567.1_2826414_2826924_-	cd10564, NapF_like, NapF, iron-sulfur subunit of periplasmic nitrate reductase
GCF_000287215.2_ASM28721v3	NZ_CP007567	Aeromonas media WS chromosome, complete genome	8	2894398-2894502	8	CRISPRCasFinder	no		DEDDh,csa3,c2c9_V-U4,cas14j,WYL,DinG,cas3	Orphan	CGATCAGAGCAGCGCGGCCACTTCGTCGGAG	31	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,c2c9_V-U4,cas14j,WYL,DinG,cas3	NA,NA|98aa|down_9|NZ_CP007567.1_2905671_2905965_-	NA|175aa|up_9|NZ_CP007567.1_2880884_2881409_+	PRK09267, PRK09267, flavodoxin FldA; Validated	NA|167aa|up_8|NZ_CP007567.1_2881455_2881956_-	pfam14539, DUF4442, Domain of unknown function (DUF4442)	NA|143aa|up_7|NZ_CP007567.1_2882200_2882629_+	PRK09462, fur, ferric uptake regulator; Provisional	NA|554aa|up_6|NZ_CP007567.1_2882746_2884408_-	PRK05347, PRK05347, glutaminyl-tRNA synthetase; Provisional	NA|888aa|up_5|NZ_CP007567.1_2884747_2887411_-	cd06569, GH20_Sm-chitobiase-like, The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin	NA|485aa|up_4|NZ_CP007567.1_2887533_2888988_-	TIGR01998, N-acetylglucosamine_and_glucose_PTS, PTS system, N-acetylglucosamine-specific IIBC component	NA|267aa|up_3|NZ_CP007567.1_2889259_2890060_+	PRK00443, nagB, glucosamine-6-phosphate deaminase; Provisional	NA|382aa|up_2|NZ_CP007567.1_2890069_2891215_+	PRK11170, nagA, N-acetylglucosamine-6-phosphate deacetylase; Provisional	NA|405aa|up_1|NZ_CP007567.1_2891219_2892434_+	pfam00480, ROK, ROK family	NA|542aa|up_0|NZ_CP007567.1_2892502_2894128_-	PRK11598, PRK11598, putative metal dependent hydrolase; Provisional	NA|593aa|down_0|NZ_CP007567.1_2895283_2897062_-	PRK00476, aspS, aspartyl-tRNA synthetase; Validated	NA|287aa|down_1|NZ_CP007567.1_2897494_2898355_+	PRK10302, PRK10302, hypothetical protein; Provisional	NA|247aa|down_2|NZ_CP007567.1_2898738_2899479_+	TIGR00740, tRNA_cmo5U34-methyltransferase, tRNA (cmo5U34)-methyltransferase	NA|326aa|down_3|NZ_CP007567.1_2899475_2900453_+	PRK15068, PRK15068, tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA|253aa|down_4|NZ_CP007567.1_2900535_2901294_+	COG4067, COG4067, Uncharacterized protein conserved in archaea [Posttranslational modification, protein turnover, chaperones]	NA|513aa|down_5|NZ_CP007567.1_2901297_2902836_+	pfam14402, 7TM_transglut, 7 transmembrane helices usually fused to an inactive transglutaminase	NA|322aa|down_6|NZ_CP007567.1_2902839_2903805_+	TIGR02291, conserved_protein_of_unknown_function, alpha-L-glutamate ligase-related protein	NA|305aa|down_7|NZ_CP007567.1_2904109_2905024_+	cd08411, PBP2_OxyR, The C-terminal substrate-binding domain of the LysR-type transcriptional regulator OxyR, a member of the type 2 periplasmic binding fold protein superfamily	NA|149aa|down_8|NZ_CP007567.1_2905141_2905588_+	PRK10838, spr, bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase	NA|98aa|down_9|NZ_CP007567.1_2905671_2905965_-	NA
GCF_000287215.2_ASM28721v3	NZ_CP007567	Aeromonas media WS chromosome, complete genome	9	3337673-3337759	9	CRISPRCasFinder	no		DEDDh,csa3,c2c9_V-U4,cas14j,WYL,DinG,cas3	Orphan	CGCCAACGCCTCCTGTCCCTTCCTTCTTTC	30	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,c2c9_V-U4,cas14j,WYL,DinG,cas3	NA|92aa|up_1|NZ_CP007567.1_3336455_3336731_+,NA	NA|159aa|up_9|NZ_CP007567.1_3328566_3329043_+	PRK00901, PRK00901, methylated-DNA--protein-cysteine methyltransferase; Provisional	NA|125aa|up_8|NZ_CP007567.1_3329390_3329765_+	cd06990, cupin_DUF861, domain of unknown function DUF 861, cupin domain	NA|86aa|up_7|NZ_CP007567.1_3329954_3330212_-	COG3813, COG3813, Uncharacterized protein conserved in bacteria [Function unknown]	NA|110aa|up_6|NZ_CP007567.1_3330258_3330588_-	cd06990, cupin_DUF861, domain of unknown function DUF 861, cupin domain	NA|616aa|up_5|NZ_CP007567.1_3330711_3332559_-	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]	NA|204aa|up_4|NZ_CP007567.1_3332771_3333383_-	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]	NA|318aa|up_3|NZ_CP007567.1_3333511_3334465_-	cd08417, PBP2_Nitroaromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators that involved in the catabolism of nitroaromatic/naphthalene compounds and that of related regulators; contains the type 2 periplasmic binding fold	NA|363aa|up_2|NZ_CP007567.1_3334669_3335758_+	PRK12879, PRK12879, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed	NA|92aa|up_1|NZ_CP007567.1_3336455_3336731_+	NA	NA|246aa|up_0|NZ_CP007567.1_3336918_3337656_+	pfam00563, EAL, EAL domain	NA|454aa|down_0|NZ_CP007567.1_3337945_3339307_+	pfam03372, Exo_endo_phos, Endonuclease/Exonuclease/phosphatase family	NA|1036aa|down_1|NZ_CP007567.1_3339363_3342471_-	PRK14991, PRK14991, tetrathionate reductase subunit TtrA	NA|369aa|down_2|NZ_CP007567.1_3342470_3343577_-	PRK14992, PRK14992, tetrathionate reductase subunit TtrC	NA|263aa|down_3|NZ_CP007567.1_3343566_3344355_-	PRK14993, PRK14993, tetrathionate reductase subunit TtrB	NA|204aa|down_4|NZ_CP007567.1_3346558_3347170_+	COG4566, TtrR, Response regulator [Signal transduction mechanisms]	NA|247aa|down_5|NZ_CP007567.1_3347310_3348051_+	PRK05282, PRK05282, dipeptidase PepE	NA|464aa|down_6|NZ_CP007567.1_3348153_3349545_+	PRK00485, fumC, fumarate hydratase; Reviewed	NA|1323aa|down_7|NZ_CP007567.1_3350797_3354766_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|446aa|down_8|NZ_CP007567.1_3354883_3356221_+	pfam13006, Nterm_IS4, Insertion element 4 transposase N-terminal	NA|358aa|down_9|NZ_CP007567.1_3356453_3357527_-	cd06827, PLPDE_III_AR_proteobact, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, Proteobacterial Alanine Racemases
GCF_000287215.2_ASM28721v3	NZ_CP007567	Aeromonas media WS chromosome, complete genome	10	4159484-4159622	10	CRISPRCasFinder	no	WYL	DEDDh,csa3,c2c9_V-U4,cas14j,WYL,DinG,cas3	Unclear	GCTTCAACAACTGCGTTCCCACTCCTCATCCCACCAGCGC	40	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,c2c9_V-U4,cas14j,WYL,DinG,cas3	NA,NA	NA|706aa|up_9|NZ_CP007567.1_4144711_4146829_+	PRK11092, PRK11092, bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase	NA|249aa|up_8|NZ_CP007567.1_4146936_4147683_+	PRK11081, PRK11081, tRNA guanosine-2'-O-methyltransferase; Provisional	NA|347aa|up_7|NZ_CP007567.1_4147672_4148713_+	PRK10749, PRK10749, lysophospholipase L2; Provisional	NA|268aa|up_6|NZ_CP007567.1_4148908_4149712_+	PRK10976, PRK10976, putative hydrolase; Provisional	NA|168aa|up_5|NZ_CP007567.1_4149774_4150278_-	smart00458, RICIN, Ricin-type beta-trefoil	NA|197aa|up_4|NZ_CP007567.1_4151153_4151744_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|369aa|up_3|NZ_CP007567.1_4151740_4152847_+	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|1027aa|up_2|NZ_CP007567.1_4152862_4155943_+	PRK09579, PRK09579, multidrug efflux RND transporter permease subunit	NA|653aa|up_1|NZ_CP007567.1_4156064_4158023_+	COG4191, COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms]	NA|450aa|up_0|NZ_CP007567.1_4158099_4159449_+	PRK06116, PRK06116, glutathione reductase; Validated	NA|263aa|down_0|NZ_CP007567.1_4159906_4160695_-	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]	NA|335aa|down_1|NZ_CP007567.1_4160746_4161751_-	cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases	NA|148aa|down_2|NZ_CP007567.1_4162802_4163246_+	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	NA|560aa|down_3|NZ_CP007567.1_4163575_4165255_+	PRK05482, PRK05482, potassium-transporting ATPase subunit A; Provisional	NA|688aa|down_4|NZ_CP007567.1_4165322_4167386_+	PRK01122, PRK01122, potassium-transporting ATPase subunit KdpB	NA|172aa|down_5|NZ_CP007567.1_4167641_4168157_+	pfam02669, KdpC, K+-transporting ATPase, c chain	NA|863aa|down_6|NZ_CP007567.1_4168351_4170940_+	COG2205, KdpD, Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms]	NA|228aa|down_7|NZ_CP007567.1_4171003_4171687_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|376aa|down_8|NZ_CP007567.1_4171691_4172819_-	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|263aa|down_9|NZ_CP007567.1_4172911_4173700_+	cd06124, cupin_NimR-like_N, AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain
GCF_000287215.2_ASM28721v3	NZ_CP007567	Aeromonas media WS chromosome, complete genome	11	4647833-4647929	11	CRISPRCasFinder	no		DEDDh,csa3,c2c9_V-U4,cas14j,WYL,DinG,cas3	Orphan	TGAACACCTTGCCGATCTCCTCC	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,c2c9_V-U4,cas14j,WYL,DinG,cas3	NA,NA|135aa|down_5|NZ_CP007567.1_4656052_4656457_-	NA|316aa|up_9|NZ_CP007567.1_4630342_4631290_-	PRK12683, PRK12683, transcriptional regulator CysB-like protein; Reviewed	NA|356aa|up_8|NZ_CP007567.1_4631406_4632474_-	cd03296, ABC_CysA_sulfate_importer, ATP-binding cassette domain of the sulfate transporter	NA|298aa|up_7|NZ_CP007567.1_4632548_4633442_-	COG4208, CysW, ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]	NA|280aa|up_6|NZ_CP007567.1_4633438_4634278_-	TIGR02139, permease_CysT, sulfate ABC transporter, permease protein CysT	NA|192aa|up_5|NZ_CP007567.1_4634557_4635133_-	pfam06821, Ser_hydrolase, Serine hydrolase	NA|399aa|up_4|NZ_CP007567.1_4642283_4643480_+	pfam05940, NnrS, NnrS protein	NA|190aa|up_3|NZ_CP007567.1_4643483_4644053_-	cd02209, cupin_XRE_C, XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain	NA|384aa|up_2|NZ_CP007567.1_4644168_4645320_+	pfam03594, BenE, Benzoate membrane transport protein	NA|355aa|up_1|NZ_CP007567.1_4645467_4646532_+	pfam11301, DUF3103, Protein of unknown function (DUF3103)	NA|157aa|up_0|NZ_CP007567.1_4646652_4647123_-	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|388aa|down_0|NZ_CP007567.1_4650240_4651404_+	PRK03673, PRK03673, nicotinamide mononucleotide deamidase-related protein YfaY	NA|172aa|down_1|NZ_CP007567.1_4651411_4651927_-	PRK11648, PRK11648, metal-dependent hydrolase	NA|543aa|down_2|NZ_CP007567.1_4652367_4653996_+	pfam03961, FapA, Flagellar Assembly Protein A	NA|270aa|down_3|NZ_CP007567.1_4654110_4654920_+	PRK10513, PRK10513, sugar phosphate phosphatase; Provisional	NA|257aa|down_4|NZ_CP007567.1_4655285_4656056_+	pfam07722, Peptidase_C26, Peptidase C26	NA|135aa|down_5|NZ_CP007567.1_4656052_4656457_-	NA	NA|446aa|down_6|NZ_CP007567.1_4656532_4657870_-	pfam13006, Nterm_IS4, Insertion element 4 transposase N-terminal	NA|237aa|down_7|NZ_CP007567.1_4657990_4658701_-	PRK10748, PRK10748, 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB	NA|308aa|down_8|NZ_CP007567.1_4658747_4659671_-	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed	NA|227aa|down_9|NZ_CP007567.1_4659696_4660377_-	COG3159, COG3159, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_000287215.2_ASM28721v3	NZ_CP007567	Aeromonas media WS chromosome, complete genome	12	4728720-4728932	1,12,1	CRT,CRISPRCasFinder,PILER-CR	no		DEDDh,csa3,c2c9_V-U4,cas14j,WYL,DinG,cas3	Orphan	GGTCTTCCCCACGCCCGTGGGGGTGTTTC,TTCCCCACGCCCGTGGGGGTGTTTC,GTCTTCCCCACGCCCGTGGGGGTGTTTCT	29,25,29	0	0	NA	NA	I-B,III-A,III-B:I-B,III-A,III-B:I-B,III-A,III-B	3,3,2	3	Orphan	DEDDh,csa3,c2c9_V-U4,cas14j,WYL,DinG,cas3	NA|59aa|up_7|NZ_CP007567.1_4717924_4718101_+,NA|260aa|up_3|NZ_CP007567.1_4725625_4726405_+,NA|88aa|down_1|NZ_CP007567.1_4731448_4731712_+,NA|68aa|down_6|NZ_CP007567.1_4737262_4737466_+	NA|1232aa|up_9|NZ_CP007567.1_4712299_4715995_-	PRK09490, metH, B12-dependent methionine synthase; Provisional	NA|426aa|up_8|NZ_CP007567.1_4716197_4717475_+	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism]	NA|59aa|up_7|NZ_CP007567.1_4717924_4718101_+	NA	NA|538aa|up_6|NZ_CP007567.1_4718370_4719984_-	COG5421, COG5421, Transposase [DNA replication, recombination, and repair]	NA|339aa|up_5|NZ_CP007567.1_4721518_4722535_+	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair]	NA|538aa|up_4|NZ_CP007567.1_4723074_4724688_+	COG5421, COG5421, Transposase [DNA replication, recombination, and repair]	NA|260aa|up_3|NZ_CP007567.1_4725625_4726405_+	NA	NA|62aa|up_2|NZ_CP007567.1_4726508_4726694_+	COG3311, AlpA, Predicted transcriptional regulator [Transcription]	NA|339aa|up_1|NZ_CP007567.1_4726749_4727766_+	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair]	NA|236aa|up_0|NZ_CP007567.1_4727935_4728643_+	pfam01695, IstB_IS21, IstB-like ATP binding protein	NA|174aa|down_0|NZ_CP007567.1_4730706_4731228_-	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|88aa|down_1|NZ_CP007567.1_4731448_4731712_+	NA	NA|425aa|down_2|NZ_CP007567.1_4732210_4733485_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|230aa|down_3|NZ_CP007567.1_4734093_4734783_-	cd01994, Alpha_ANH_like_IV, This is a subfamily of Adenine nucleotide alpha hydrolases superfamily	NA|439aa|down_4|NZ_CP007567.1_4734937_4736254_+	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily	NA|239aa|down_5|NZ_CP007567.1_4736385_4737102_+	PRK10995, PRK10995, MarC family NAAT transporter	NA|68aa|down_6|NZ_CP007567.1_4737262_4737466_+	NA	NA|446aa|down_7|NZ_CP007567.1_4737637_4738975_+	pfam13006, Nterm_IS4, Insertion element 4 transposase N-terminal	NA|483aa|down_8|NZ_CP007567.1_4739041_4740490_-	PRK10735, tldD, protease TldD; Provisional	NA|269aa|down_9|NZ_CP007567.1_4740603_4741410_-	cd07572, nit, Nit1, Nit 2, and related proteins, and the Nit1-like domain of NitFhit (class 10 nitrilases)
GCF_000287215.2_ASM28721v3	NZ_CP007567	Aeromonas media WS chromosome, complete genome	13	4772857-4772959	13	CRISPRCasFinder	no		DEDDh,csa3,c2c9_V-U4,cas14j,WYL,DinG,cas3	Orphan	GCGTTCTTCTCAAGCTGGCGCACACGCTC	29	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,c2c9_V-U4,cas14j,WYL,DinG,cas3	NA,NA	NA|339aa|up_9|NZ_CP007567.1_4760004_4761021_-	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair]	NA|510aa|up_8|NZ_CP007567.1_4761256_4762786_+	cd01948, EAL, EAL domain	NA|366aa|up_7|NZ_CP007567.1_4762952_4764050_+	PRK10599, PRK10599, sodium-potassium/proton antiporter ChaA	NA|511aa|up_6|NZ_CP007567.1_4764251_4765784_-	PRK09367, PRK09367, histidine ammonia-lyase; Provisional	NA|568aa|up_5|NZ_CP007567.1_4765785_4767489_-	PRK05414, PRK05414, urocanate hydratase; Provisional	NA|313aa|up_4|NZ_CP007567.1_4767555_4768494_-	PRK13776, PRK13776, formimidoylglutamase; Provisional	NA|412aa|up_3|NZ_CP007567.1_4768486_4769722_-	PRK09356, PRK09356, imidazolonepropionase; Validated	NA|446aa|up_2|NZ_CP007567.1_4769857_4771195_-	pfam13006, Nterm_IS4, Insertion element 4 transposase N-terminal	NA|235aa|up_1|NZ_CP007567.1_4771318_4772023_-	TIGR02018, Histidine_utilization_repressor, histidine utilization repressor, proteobacterial	NA|220aa|up_0|NZ_CP007567.1_4772034_4772694_-	cd00883, beta_CA_cladeA, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site	NA|318aa|down_0|NZ_CP007567.1_4774215_4775169_-	PRK11026, ftsX, cell division ABC transporter subunit FtsX; Provisional	NA|224aa|down_1|NZ_CP007567.1_4775168_4775840_-	COG2884, FtsE, Predicted ATPase involved in cell division [Cell division and chromosome partitioning]	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
