assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000283515.1_ASM28351v1	NC_015976	Sphingobium sp. SYK-6, complete genome	1	1915746-1917762	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas5,cas8c,cas7,cas4,cas1,cas2	DEDDh,DinG,csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT	Type I-U,Type I-C, Type I-U?	GTCGCTCCCCGTGCGGGGGCGTGGATCGAAAC,GTCGCTCCCCGTGCGGGGGCGTGGATCGAAAC,GTCGCTCCCCGTGCGGGGGCGTGGATCGAAACN	32,32,33	0	0	NA	NA	NA:NA:NA	29,30,30	30	TypeI-U,TypeI-C,TypeI-U?	DEDDh,DinG,csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT	NA|56aa|up_9|NC_015976.1_1904453_1904621_-,NA|88aa|up_8|NC_015976.1_1904739_1905003_-,NA|211aa|down_0|NC_015976.1_1918222_1918855_+,NA|158aa|down_2|NC_015976.1_1919530_1920004_+,NA|85aa|down_5|NC_015976.1_1924190_1924445_-,NA|264aa|down_6|NC_015976.1_1924441_1925233_-,NA|86aa|down_7|NC_015976.1_1925229_1925487_-,NA|74aa|down_8|NC_015976.1_1925483_1925705_-	NA|56aa|up_9|NC_015976.1_1904453_1904621_-	NA	NA|88aa|up_8|NC_015976.1_1904739_1905003_-	NA	NA|181aa|up_7|NC_015976.1_1906550_1907093_+	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	cas3|784aa|up_6|NC_015976.1_1907422_1909774_+	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	cas5|222aa|up_5|NC_015976.1_1909927_1910593_+	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas8c|602aa|up_4|NC_015976.1_1910589_1912395_+	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	cas7|311aa|up_3|NC_015976.1_1912391_1913324_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas4|220aa|up_2|NC_015976.1_1913552_1914212_+	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4	cas1|347aa|up_1|NC_015976.1_1914215_1915256_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|97aa|up_0|NC_015976.1_1915260_1915551_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|211aa|down_0|NC_015976.1_1918222_1918855_+	NA	NA|218aa|down_1|NC_015976.1_1918880_1919534_+	pfam11185, DUF2971, Protein of unknown function (DUF2971)	NA|158aa|down_2|NC_015976.1_1919530_1920004_+	NA	NA|253aa|down_3|NC_015976.1_1920334_1921092_+	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|830aa|down_4|NC_015976.1_1921263_1923753_-	pfam05272, VirE, Virulence-associated protein E	NA|85aa|down_5|NC_015976.1_1924190_1924445_-	NA	NA|264aa|down_6|NC_015976.1_1924441_1925233_-	NA	NA|86aa|down_7|NC_015976.1_1925229_1925487_-	NA	NA|74aa|down_8|NC_015976.1_1925483_1925705_-	NA	NA|410aa|down_9|NC_015976.1_1926151_1927381_-	cd00801, INT_P4_C, Bacteriophage P4 integrase, C-terminal catalytic domain
GCF_000283515.1_ASM28351v1	NC_015976	Sphingobium sp. SYK-6, complete genome	2	1925831-1925979	2	CRISPRCasFinder	no	cas3,cas5,cas8c,cas7,cas4,cas1,cas2	DEDDh,DinG,csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT	Type I-U,Type I-C, Type I-U?	CTGTCAACATTTCGGTGACACATG	24	0	0	NA	NA	NA	2	2	TypeI-U,TypeI-C,TypeI-U?	DEDDh,DinG,csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT	NA|211aa|up_8|NC_015976.1_1918222_1918855_+,NA|158aa|up_6|NC_015976.1_1919530_1920004_+,NA|85aa|up_3|NC_015976.1_1924190_1924445_-,NA|264aa|up_2|NC_015976.1_1924441_1925233_-,NA|86aa|up_1|NC_015976.1_1925229_1925487_-,NA|74aa|up_0|NC_015976.1_1925483_1925705_-,NA|56aa|down_2|NC_015976.1_1928233_1928401_-,NA|74aa|down_9|NC_015976.1_1934989_1935211_-	cas2|97aa|up_9|NC_015976.1_1915260_1915551_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|211aa|up_8|NC_015976.1_1918222_1918855_+	NA	NA|218aa|up_7|NC_015976.1_1918880_1919534_+	pfam11185, DUF2971, Protein of unknown function (DUF2971)	NA|158aa|up_6|NC_015976.1_1919530_1920004_+	NA	NA|253aa|up_5|NC_015976.1_1920334_1921092_+	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|830aa|up_4|NC_015976.1_1921263_1923753_-	pfam05272, VirE, Virulence-associated protein E	NA|85aa|up_3|NC_015976.1_1924190_1924445_-	NA	NA|264aa|up_2|NC_015976.1_1924441_1925233_-	NA	NA|86aa|up_1|NC_015976.1_1925229_1925487_-	NA	NA|74aa|up_0|NC_015976.1_1925483_1925705_-	NA	NA|410aa|down_0|NC_015976.1_1926151_1927381_-	cd00801, INT_P4_C, Bacteriophage P4 integrase, C-terminal catalytic domain	NA|109aa|down_1|NC_015976.1_1927778_1928105_-	pfam06627, DUF1153, Protein of unknown function (DUF1153)	NA|56aa|down_2|NC_015976.1_1928233_1928401_-	NA	NA|167aa|down_3|NC_015976.1_1928441_1928942_-	pfam13577, SnoaL_4, SnoaL-like domain	NA|882aa|down_4|NC_015976.1_1929200_1931846_+	smart00157, PRP, Major prion protein	NA|301aa|down_5|NC_015976.1_1931856_1932759_-	cd07574, nitrilase_Rim1_like, Uncharacterized subgroup of the nitrilase superfamily; some members of this subgroup have an N-terminal RimI domain (class 12 nitrilases)	NA|189aa|down_6|NC_015976.1_1932755_1933322_-	cd04301, NAT_SF, N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate	NA|142aa|down_7|NC_015976.1_1933345_1933771_-	TIGR02096, putative_cyclase, conserved hypothetical protein, steroid delta-isomerase-related	NA|373aa|down_8|NC_015976.1_1933866_1934985_+	cd05305, L-AlaDH, Alanine dehydrogenase NAD-binding and catalytic domains	NA|74aa|down_9|NC_015976.1_1934989_1935211_-	NA
GCF_000283515.1_ASM28351v1	NC_015976	Sphingobium sp. SYK-6, complete genome	3	2382853-2382985	3	CRISPRCasFinder	no		DEDDh,DinG,csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT	Orphan	CCGATGACCTTCCGATGACCTCT	23	0	0	NA	NA	NA	2	2	Orphan	DEDDh,DinG,csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT	NA|52aa|up_9|NC_015976.1_2377682_2377838_+,NA|77aa|up_8|NC_015976.1_2377955_2378186_+,NA|141aa|up_7|NC_015976.1_2378178_2378601_+,NA|56aa|up_6|NC_015976.1_2378772_2378940_+,NA|99aa|up_5|NC_015976.1_2378932_2379229_+,NA|70aa|up_4|NC_015976.1_2379395_2379605_+,NA|69aa|up_3|NC_015976.1_2379789_2379996_+,NA|149aa|up_2|NC_015976.1_2379992_2380439_+,NA|97aa|down_0|NC_015976.1_2383217_2383508_+,NA|76aa|down_1|NC_015976.1_2383563_2383791_+,NA|79aa|down_2|NC_015976.1_2383815_2384052_+,NA|64aa|down_6|NC_015976.1_2387148_2387340_+	NA|52aa|up_9|NC_015976.1_2377682_2377838_+	NA	NA|77aa|up_8|NC_015976.1_2377955_2378186_+	NA	NA|141aa|up_7|NC_015976.1_2378178_2378601_+	NA	NA|56aa|up_6|NC_015976.1_2378772_2378940_+	NA	NA|99aa|up_5|NC_015976.1_2378932_2379229_+	NA	NA|70aa|up_4|NC_015976.1_2379395_2379605_+	NA	NA|69aa|up_3|NC_015976.1_2379789_2379996_+	NA	NA|149aa|up_2|NC_015976.1_2379992_2380439_+	NA	NA|85aa|up_1|NC_015976.1_2380442_2380697_+	pfam10073, DUF2312, Uncharacterized protein conserved in bacteria (DUF2312)	NA|293aa|up_0|NC_015976.1_2380698_2381577_+	COG4643, COG4643, Uncharacterized protein conserved in bacteria [Function unknown]	NA|97aa|down_0|NC_015976.1_2383217_2383508_+	NA	NA|76aa|down_1|NC_015976.1_2383563_2383791_+	NA	NA|79aa|down_2|NC_015976.1_2383815_2384052_+	NA	NA|132aa|down_3|NC_015976.1_2384048_2384444_+	pfam16677, GP3_package, DNA-packaging protein gp3	NA|408aa|down_4|NC_015976.1_2384424_2385648_+	TIGR01547, Uncharacterized_protein_YqaT, phage terminase, large subunit, PBSX family	NA|486aa|down_5|NC_015976.1_2385694_2387152_+	pfam06381, DUF1073, Protein of unknown function (DUF1073)	NA|64aa|down_6|NC_015976.1_2387148_2387340_+	NA	NA|279aa|down_7|NC_015976.1_2387343_2388180_+	COG2369, COG2369, Uncharacterized protein, homolog of phage Mu protein gp30 [Function unknown]	NA|184aa|down_8|NC_015976.1_2388274_2388826_+	pfam13392, HNH_3, HNH endonuclease	NA|376aa|down_9|NC_015976.1_2388867_2389995_+	pfam09979, DUF2213, Uncharacterized protein conserved in bacteria (DUF2213)
