assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000277775.2_ASM27777v2	NC_018150	Mycobacteroides abscessus subsp. massiliense str. GO 06, complete sequence	1	566813-566941	1	CRISPRCasFinder	no		csa3,cas3,WYL,cas4,DEDDh,DinG	Orphan	TTCCCGTGGTGGCTCCGATAGCGGCTCGCGGGGTGGTTGGGGCGA	45	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,cas4,DEDDh,DinG	NA|476aa|up_5|NC_018150.2_560343_561771_-,NA|200aa|down_5|NC_018150.2_577542_578142_+	NA|836aa|up_9|NC_018150.2_554450_556958_-	cd16025, PAS_like, Bacterial Arylsulfatase of Pseudomonas aeruginosa and related proteins	NA|268aa|up_8|NC_018150.2_557121_557925_-	COG1305, COG1305, Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism]	NA|310aa|up_7|NC_018150.2_558014_558944_-	pfam03781, FGE-sulfatase, Sulfatase-modifying factor enzyme 1	NA|432aa|up_6|NC_018150.2_558988_560284_-	cd14792, GH27, glycosyl hydrolase family 27 (GH27)	NA|476aa|up_5|NC_018150.2_560343_561771_-	NA	NA|138aa|up_4|NC_018150.2_561849_562263_+	pfam05423, Mycobact_memb, Mycobacterium membrane protein	NA|300aa|up_3|NC_018150.2_562252_563152_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|239aa|up_2|NC_018150.2_563187_563904_+	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown]	NA|222aa|up_1|NC_018150.2_563947_564613_+	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown]	NA|190aa|up_0|NC_018150.2_564663_565233_+	PRK00416, dcd, deoxycytidine triphosphate deaminase; Reviewed	NA|447aa|down_0|NC_018150.2_567144_568485_+	COG1004, Ugd, Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]	NA|437aa|down_1|NC_018150.2_568569_569880_-	PRK09265, PRK09265, aminotransferase AlaT; Validated	NA|1011aa|down_2|NC_018150.2_569887_572920_-	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion]	NA|790aa|down_3|NC_018150.2_573078_575448_-	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|607aa|down_4|NC_018150.2_575540_577361_-	COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones]	NA|200aa|down_5|NC_018150.2_577542_578142_+	NA	NA|128aa|down_6|NC_018150.2_578154_578538_-	COG2259, COG2259, Predicted membrane protein [Function unknown]	NA|308aa|down_7|NC_018150.2_578618_579542_-	cd07326, M56_BlaR1_MecR1_like, Peptidase M56-like including those in BlaR1 and MecR1, integral membrane metallopeptidase	NA|121aa|down_8|NC_018150.2_579538_579901_-	pfam03965, Penicillinase_R, Penicillinase repressor	NA|294aa|down_9|NC_018150.2_579918_580800_-	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones]
GCF_000277775.2_ASM27777v2	NC_018150	Mycobacteroides abscessus subsp. massiliense str. GO 06, complete sequence	2	3793391-3793478	2	CRISPRCasFinder	no	csa3	csa3,cas3,WYL,cas4,DEDDh,DinG	Type I-A	CCAGCCACCGCACACGCCGTTGTAGCAGCCG	31	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,cas4,DEDDh,DinG	NA,NA|194aa|down_9|NC_018150.2_3802655_3803237_-	NA|402aa|up_9|NC_018150.2_3782728_3783934_+	PRK03858, PRK03858, DNA polymerase IV; Validated	NA|261aa|up_8|NC_018150.2_3783960_3784743_-	cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA and similar domains	NA|249aa|up_7|NC_018150.2_3784868_3785615_+	PRK02101, PRK02101, peroxide stress protein YaaA	NA|597aa|up_6|NC_018150.2_3785604_3787395_-	PHA03247, PHA03247, large tegument protein UL36; Provisional	NA|145aa|up_5|NC_018150.2_3787488_3787923_-	pfam05610, DUF779, Protein of unknown function (DUF779)	NA|507aa|up_4|NC_018150.2_3787903_3789424_-	cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like	NA|52aa|up_3|NC_018150.2_3789499_3789655_-	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria	NA|671aa|up_2|NC_018150.2_3789815_3791828_+	cd06179, MFS_TRI12_like, Fungal trichothecene efflux pump (TRI12) of the Major Facilitator Superfamily of transporters	NA|188aa|up_1|NC_018150.2_3791778_3792342_-	pfam17940, TetR_C_31, Tetracyclin repressor-like, C-terminal domain	NA|307aa|up_0|NC_018150.2_3792433_3793354_+	TIGR03560, F420_Rv1855c, probable F420-dependent oxidoreductase, Rv1855c family	NA|148aa|down_0|NC_018150.2_3793762_3794206_-	pfam10604, Polyketide_cyc2, Polyketide cyclase / dehydrase and lipid transport	NA|379aa|down_1|NC_018150.2_3794242_3795379_-	pfam03583, LIP, Secretory lipase	NA|72aa|down_2|NC_018150.2_3795401_3795617_-	pfam14013, MT0933_antitox, MT0933-like antitoxin protein	NA|278aa|down_3|NC_018150.2_3795671_3796505_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|801aa|down_4|NC_018150.2_3796534_3798937_-	cd02609, P-type_ATPase, uncharacterized subfamily of P-type ATPase transporter, similar to uncharacterized Streptococcus pneumoniae exported protein 7, Exp7	NA|226aa|down_5|NC_018150.2_3799054_3799732_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|369aa|down_6|NC_018150.2_3799728_3800835_-	cd16283, RomA-like_MBL-fold, Enterobacter cloacae RomA and related proteins; MBL-fold metallo hydrolase domain	NA|244aa|down_7|NC_018150.2_3800831_3801563_-	PRK07854, PRK07854, enoyl-CoA hydratase; Provisional	NA|366aa|down_8|NC_018150.2_3801578_3802676_+	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|194aa|down_9|NC_018150.2_3802655_3803237_-	NA
GCF_000277775.2_ASM27777v2	NC_018150	Mycobacteroides abscessus subsp. massiliense str. GO 06, complete sequence	3	4518611-4518713	3	CRISPRCasFinder	no		csa3,cas3,WYL,cas4,DEDDh,DinG	Orphan	GCGCTGACCAACCCCGGCCTGACCA	25	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,cas4,DEDDh,DinG	NA|662aa|up_4|NC_018150.2_4511331_4513317_-,NA	NA|638aa|up_9|NC_018150.2_4504387_4506301_-	PRK07769, PRK07769, long-chain-fatty-acid--CoA ligase; Validated	NA|337aa|up_8|NC_018150.2_4506604_4507615_-	pfam01083, Cutinase, Cutinase	NA|326aa|up_7|NC_018150.2_4507854_4508832_-	COG0627, COG0627, Predicted esterase [General function prediction only]	NA|334aa|up_6|NC_018150.2_4509089_4510091_-	COG0627, COG0627, Predicted esterase [General function prediction only]	NA|325aa|up_5|NC_018150.2_4510168_4511143_-	COG0627, COG0627, Predicted esterase [General function prediction only]	NA|662aa|up_4|NC_018150.2_4511331_4513317_-	NA	NA|305aa|up_3|NC_018150.2_4513330_4514245_-	PRK12324, PRK12324, decaprenyl-phosphate phosphoribosyltransferase	NA|188aa|up_2|NC_018150.2_4514241_4514805_-	cd03395, PAP2_like_4, PAP2_like_4 proteins	NA|651aa|up_1|NC_018150.2_4514801_4516754_-	pfam17994, Glft2_N, Galactofuranosyltransferase 2 N-terminal	NA|413aa|up_0|NC_018150.2_4516746_4517985_-	COG0562, Glf, UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane]	NA|582aa|down_0|NC_018150.2_4519280_4521026_+	COG5479, COG5479, Uncharacterized protein potentially involved in peptidoglycan biosynthesis [Cell envelope biogenesis, outer membrane]	NA|273aa|down_1|NC_018150.2_4521041_4521860_-	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase	NA|255aa|down_2|NC_018150.2_4521856_4522621_-	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|266aa|down_3|NC_018150.2_4522621_4523419_-	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|258aa|down_4|NC_018150.2_4523466_4524240_-	PRK07231, FabG-like, SDR family oxidoreductase	NA|241aa|down_5|NC_018150.2_4524284_4525007_+	cd05150, APH, Aminoglycoside 3'-phosphotransferase	NA|188aa|down_6|NC_018150.2_4525052_4525616_+	pfam05257, CHAP, CHAP domain	NA|297aa|down_7|NC_018150.2_4525616_4526507_-	cd08442, PBP2_YofA_SoxR_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators, YofA and SoxR, contains the type 2 periplasmic binding fold	NA|137aa|down_8|NC_018150.2_4526519_4526930_-	pfam14552, Tautomerase_2, Tautomerase enzyme	NA|322aa|down_9|NC_018150.2_4526933_4527899_-	cd04730, NPD_like, 2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes oxidative denitrification of nitroalkanes to their corresponding carbonyl compounds and nitrites
GCF_000277775.2_ASM27777v2	NC_018150	Mycobacteroides abscessus subsp. massiliense str. GO 06, complete sequence	4	4648981-4649082	4	CRISPRCasFinder	no		csa3,cas3,WYL,cas4,DEDDh,DinG	Orphan	GGCGGATACGGTGCTCCGCCTCAG	24	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,cas4,DEDDh,DinG	NA|357aa|up_9|NC_018150.2_4638972_4640043_+,NA|74aa|up_2|NC_018150.2_4644643_4644865_-,NA	NA|357aa|up_9|NC_018150.2_4638972_4640043_+	NA	NA|146aa|up_8|NC_018150.2_4640058_4640496_-	pfam03994, DUF350, Domain of Unknown Function (DUF350)	NA|389aa|up_7|NC_018150.2_4640534_4641701_-	pfam03738, GSP_synth, Glutathionylspermidine synthase preATP-grasp	NA|205aa|up_6|NC_018150.2_4641700_4642315_-	pfam06693, DUF1190, Protein of unknown function (DUF1190)	NA|130aa|up_5|NC_018150.2_4642637_4643027_-	pfam13630, SdpI, SdpI/YfhL protein family	NA|315aa|up_4|NC_018150.2_4643077_4644022_-	TIGR04033, conserved_hypothetical_protein, antimicrobial peptide system protein, SdpB family	NA|172aa|up_3|NC_018150.2_4644060_4644576_-	pfam17418, SdpA, Sporulation delaying protein SdpA	NA|74aa|up_2|NC_018150.2_4644643_4644865_-	NA	NA|143aa|up_1|NC_018150.2_4645422_4645851_-	pfam13630, SdpI, SdpI/YfhL protein family	NA|211aa|up_0|NC_018150.2_4646416_4647049_-	pfam09770, PAT1, Topoisomerase II-associated protein PAT1	NA|155aa|down_0|NC_018150.2_4649823_4650288_+	COG1716, COG1716, FOG: FHA domain [Signal transduction mechanisms]	NA|502aa|down_1|NC_018150.2_4650284_4651790_+	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms]	NA|486aa|down_2|NC_018150.2_4651786_4653244_+	COG0772, FtsW, Bacterial cell division membrane protein [Cell division and chromosome partitioning]	NA|505aa|down_3|NC_018150.2_4653240_4654755_+	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane]	NA|629aa|down_4|NC_018150.2_4656012_4657899_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|225aa|down_5|NC_018150.2_4657905_4658580_-	PRK07765, PRK07765, aminodeoxychorismate/anthranilate synthase component II	NA|239aa|down_6|NC_018150.2_4658637_4659354_-	pfam05949, DUF881, Bacterial protein of unknown function (DUF881)	NA|88aa|down_7|NC_018150.2_4659553_4659817_+	PRK00159, PRK00159, putative septation inhibitor protein; Reviewed	NA|142aa|down_8|NC_018150.2_4659971_4660397_+	pfam10756, bPH_6, Bacterial PH domain	NA|300aa|down_9|NC_018150.2_4660455_4661355_+	TIGR00027, Hypothetical_protein_Rv0893c/MT0917/Mb0917c
