The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_018143	Mycobacterium tuberculosis H37Rv, complete sequence	4411709	889074	947647	4411709	protease,bacteriocin,transposase,tRNA	Burkholderia_virus(16.67%)	55	NA	NA
WP_087902221.1|889074_890335_+|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
WP_009935676.1|890390_891485_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_003404092.1|891474_892272_-|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
WP_003404098.1|892268_893276_-	Dyp-type peroxidase	NA	NA	NA	NA	NA
WP_003916725.1|893320_894622_+	M18 family aminopeptidase	NA	NA	NA	NA	NA
WP_003898592.1|894633_894981_+	VOC family protein	NA	NA	NA	NA	NA
WP_003404111.1|894974_895631_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003404114.1|895822_898087_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	64.3	8.1e-274
WP_003404117.1|898083_898713_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_003404120.1|898833_899790_+	3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA	NA	NA	NA	NA	NA
WP_003898594.1|899734_901333_-	exopolysaccharide phosphotransferase CpsY	NA	NA	NA	NA	NA
WP_003404127.1|901637_902027_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003911290.1|902167_903697_+	amidophosphoribosyltransferase	NA	A0A1B1ISH6	uncultured_Mediterranean_phage	30.6	2.5e-45
WP_003404132.1|903727_904822_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	37.3	2.3e-56
WP_003404135.1|904907_905090_-	DUF3073 domain-containing protein	NA	NA	NA	NA	NA
WP_003404137.1|905236_906343_-	folate-binding protein YgfZ	NA	NA	NA	NA	NA
WP_003916726.1|906425_907295_+	aminodeoxychorismate lyase	NA	NA	NA	NA	NA
WP_003898596.1|907340_908021_-	FABP family protein	NA	NA	NA	NA	NA
WP_003404278.1|908183_908486_-	DUF1416 domain-containing protein	NA	NA	NA	NA	NA
WP_003404293.1|908487_909321_-	sulfurtransferase	NA	NA	NA	NA	NA
WP_003898598.1|909613_910036_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_003404298.1|910032_910845_-	mannan chain length control protein LmeA	NA	NA	NA	NA	NA
WP_003898599.1|910974_911742_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	31.5	3.1e-15
WP_003404307.1|911738_912686_+	mycothiol synthase	NA	NA	NA	NA	NA
WP_003404312.1|912728_913505_+	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.1	1.6e-16
WP_003404314.1|913560_914202_-	phosphate signaling complex protein PhoU	NA	NA	NA	NA	NA
WP_003898600.1|914259_916314_-	LCP family protein	NA	NA	NA	NA	NA
WP_003898601.1|916479_917649_-|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003404321.1|917736_918753_-	acyl-ACP desaturase DesA1	NA	NA	NA	NA	NA
WP_003404326.1|918914_919556_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003898602.1|919636_920692_+	DUF2236 domain-containing protein	NA	NA	NA	NA	NA
WP_003404335.1|920743_921136_-	Ni(II)/Co(II)-sensing metalloregulatory transcriptional repressor KmtR	NA	NA	NA	NA	NA
WP_003404336.1|921193_921616_-	nucleoside deaminase	NA	NA	NA	NA	NA
WP_003916729.1|921577_921868_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_003404349.1|921972_922878_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_003404352.1|922896_923712_-	TIGR04255 family protein	NA	NA	NA	NA	NA
WP_003404353.1|924953_925367_+	PE family protein	NA	NA	NA	NA	NA
WP_012054164.1|925363_927613_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010886090.1|927839_930488_-	PE family protein	NA	NA	NA	NA	NA
WP_003404362.1|930955_931600_+	sensor domain-containing protein	NA	NA	NA	NA	NA
WP_003898607.1|931580_932132_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003906455.1|932281_932935_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003404368.1|933005_934034_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003898609.1|934722_935493_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003404373.1|935579_936392_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_003404376.1|936459_937320_-	proline-specific peptidase family protein	NA	NA	NA	NA	NA
WP_003404382.1|938114_939407_+	MFS transporter	NA	NA	NA	NA	NA
WP_003404384.1|939390_940395_+	thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha	NA	NA	NA	NA	NA
WP_003404388.1|940458_941109_-	two-component system response regulator NarL	NA	NA	NA	NA	NA
WP_003898611.1|941192_942470_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_003404392.1|942682_944197_-	multicopper oxidase MmcO	NA	NA	NA	NA	NA
WP_003901025.1|944345_944738_+	lipoprotein LpqS	NA	NA	NA	NA	NA
WP_009935595.1|944940_946059_+	S-sulfocysteine synthase CysK2	NA	NA	NA	NA	NA
WP_003404402.1|946058_947318_+	MFS transporter	NA	NA	NA	NA	NA
WP_003404404.1|947314_947647_+|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 2
NC_018143	Mycobacterium tuberculosis H37Rv, complete sequence	4411709	2941198	2976429	4411709	head,capsid,integrase,transposase,tRNA,protease,terminase	Tupanvirus(11.11%)	40	2969999:2970026	2980981:2981008
WP_003413486.1|2941198_2943277_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	34.9	2.5e-104
WP_003413487.1|2943385_2943613_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009938541.1|2943609_2944995_-	PE family protein	NA	NA	NA	NA	NA
WP_003413569.1|2945339_2945840_+	DUF1990 family protein	NA	NA	NA	NA	NA
WP_003413574.1|2945856_2946297_-	DoxX family membrane protein	NA	NA	NA	NA	NA
WP_003902320.1|2946392_2947121_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_003413583.1|2947105_2947459_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_003413586.1|2947471_2947897_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003413588.1|2947893_2948568_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003413589.1|2948645_2949467_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_003413592.1|2949602_2950496_+	universal stress protein TB31.7	NA	NA	NA	NA	NA
WP_003413594.1|2950498_2951317_-	universal stress protein	NA	NA	NA	NA	NA
WP_003899401.1|2951331_2952513_-|protease	site-2 protease family protein	protease	NA	NA	NA	NA
WP_003413598.1|2952571_2953003_-	hypoxic response protein Hrp1	NA	A0A2I6B2H4	Macacine_betaherpesvirus	100.0	1.9e-75
WP_003899402.1|2953516_2954758_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_085976157.1|2955172_2955430_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413610.1|2955776_2956901_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413614.1|2956902_2957442_+	archease	NA	NA	NA	NA	NA
WP_003413616.1|2957581_2958880_+	RtcB family protein	NA	A2RQD0	Archaeal_BJ1_virus	43.3	3.8e-90
WP_003413619.1|2958918_2959200_-	DUF1876 domain-containing protein	NA	NA	NA	NA	NA
WP_003413625.1|2959344_2959830_-	non-heme di-iron catalase	NA	NA	NA	NA	NA
WP_003908019.1|2959856_2960111_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009938544.1|2960114_2962451_-	PE family protein	NA	NA	NA	NA	NA
WP_003899405.1|2962479_2962722_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003899406.1|2962722_2963400_+	membrane protein	NA	NA	NA	NA	NA
WP_003413654.1|2963595_2964252_+	DedA family protein	NA	NA	NA	NA	NA
WP_003413657.1|2964414_2964861_+	anti-sigma factor antagonist	NA	NA	NA	NA	NA
WP_003413663.1|2965035_2965368_-	YnfA family protein	NA	NA	NA	NA	NA
WP_003413665.1|2965487_2965847_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003413675.1|2965948_2966407_+	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_003899407.1|2966542_2966923_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003413686.1|2966919_2968416_+	ACR3 family arsenite efflux transporter	NA	A0A2H4PQT9	Staphylococcus_phage	39.7	5.1e-14
WP_003912823.1|2968650_2968842_+	antitoxin MazE family protein	NA	NA	NA	NA	NA
2969999:2970026	attL	ACTGGTTCAATCCCAGTATCGCGCACCA	NA	NA	NA	NA
WP_003899409.1|2970132_2970564_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003900538.1|2970560_2971559_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2D1G8E2	Mycobacterium_phage	47.8	7.4e-62
WP_003900539.1|2971572_2972037_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_087902221.1|2972169_2973430_+|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
WP_009935349.1|2973804_2975244_-|capsid	phage major capsid protein	capsid	A0A1B3AYS4	Gordonia_phage	40.6	1.4e-66
WP_003899412.1|2975251_2975785_-|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JB68	uncultured_Caudovirales_phage	32.9	3.1e-06
WP_003900541.1|2975937_2976429_-|terminase	phage terminase small subunit P27 family	terminase	V9H0V4	Actinophage	47.2	9.4e-18
2980981:2981008	attR	ACTGGTTCAATCCCAGTATCGCGCACCA	NA	NA	NA	NA
>prophage 3
NC_018143	Mycobacterium tuberculosis H37Rv, complete sequence	4411709	3710603	3796541	4411709	protease,transposase,tRNA	Burkholderia_virus(33.33%)	52	NA	NA
WP_087902221.1|3710603_3711864_+|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
WP_003905037.1|3711919_3713632_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_009935306.1|3713564_3714503_-	sigma-70 family RNA polymerase sigma factor SigJ	NA	NA	NA	NA	NA
WP_003917150.1|3714511_3715879_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	26.0	3.1e-18
WP_003417415.1|3715947_3717165_+	D-alanyl-D-alanine carboxypeptidase DacB1	NA	A0A1P8VVG5	Erythrobacter_phage	27.3	8.0e-10
WP_003417416.1|3717260_3718769_+	sugar porter family MFS transporter	NA	NA	NA	NA	NA
WP_003417418.1|3718765_3719917_+	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA	NA
WP_003417421.1|3720107_3720953_-|protease	PDZ-interacting protease regulator Ppr1	protease	NA	NA	NA	NA
WP_003900026.1|3721427_3721868_+	heavy metal-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003417435.1|3721901_3722771_-	inner membrane protein YhjD	NA	NA	NA	NA	NA
WP_003417440.1|3722791_3723802_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003905041.1|3724074_3724719_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_003417452.1|3724785_3726015_-	NADP-dependent isocitrate dehydrogenase	NA	NA	NA	NA	NA
WP_003900028.1|3726297_3727647_+	bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase	NA	A0A0B5JD48	Pandoravirus	26.5	2.5e-12
WP_003417458.1|3727658_3728798_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003417461.1|3728794_3729526_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_010886163.1|3729534_3737106_-	PPE family protein	NA	NA	NA	NA	NA
WP_009938644.1|3737154_3738171_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010886165.1|3738328_3742945_-	PE family protein	NA	NA	NA	NA	NA
WP_003417619.1|3743368_3743626_-	DUF3017 domain-containing protein	NA	NA	NA	NA	NA
WP_010886166.1|3743881_3753355_-	PPE family protein	NA	NA	NA	NA	NA
WP_049961743.1|3753980_3754427_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_003900675.1|3754463_3755204_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_009938650.1|3755498_3755786_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009939158.1|3756122_3767273_-	PPE family protein	NA	NA	NA	NA	NA
WP_003417745.1|3769281_3769671_+	DUF732 domain-containing protein	NA	NA	NA	NA	NA
WP_003417749.1|3769684_3769978_-	DUF3017 domain-containing protein	NA	NA	NA	NA	NA
WP_003417751.1|3769974_3770820_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	NA	NA	NA	NA
WP_003417757.1|3770943_3771219_+	type II toxin-antitoxin system antitoxin RelJ	NA	NA	NA	NA	NA
WP_003417760.1|3771215_3771473_+	Txe/YoeB family addiction module toxin	NA	NA	NA	NA	NA
WP_003900033.1|3771514_3772705_+	NADH:flavin oxidoreductase	NA	NA	NA	NA	NA
WP_003417765.1|3772821_3773190_+	FHA domain-containing protein	NA	NA	NA	NA	NA
WP_003417767.1|3773186_3773738_-	pentapeptide repeat protein MfpA	NA	NA	NA	NA	NA
WP_003417769.1|3773744_3774326_-	ATP/GTP-binding protein	NA	NA	NA	NA	NA
WP_003417772.1|3774306_3774675_-	DUF742 domain-containing protein	NA	NA	NA	NA	NA
WP_003417776.1|3774652_3775045_-	roadblock/LC7 domain-containing protein	NA	NA	NA	NA	NA
WP_003900676.1|3775041_3777672_-	HAMP domain-containing protein	NA	NA	NA	NA	NA
WP_003417878.1|3777907_3778372_+|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	tRNA	NA	NA	NA	NA
WP_009938654.1|3778738_3780514_+	PE family protein	NA	NA	NA	NA	NA
WP_003417881.1|3780514_3781159_-	nitroreductase family protein	NA	NA	NA	NA	NA
WP_003912209.1|3781181_3781592_+	TIGR03667 family PPOX class F420-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003417885.1|3781680_3784956_-	error-prone DNA polymerase	NA	A0A1C9LWS4	Streptomyces_phage	32.4	1.7e-118
WP_003900036.1|3785111_3786452_+	diacyglycerol O-acyltransferase	NA	NA	NA	NA	NA
WP_003417892.1|3786493_3787669_+	trehalose-phosphatase	NA	NA	NA	NA	NA
WP_003417895.1|3787722_3787827_+	PE family protein	NA	NA	NA	NA	NA
WP_003900037.1|3787905_3788547_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003417897.1|3788547_3788796_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_003417900.1|3788800_3790228_+	amidase	NA	NA	NA	NA	NA
WP_003417903.1|3790335_3790989_+	HAD family phosphatase	NA	NA	NA	NA	NA
WP_003417905.1|3791027_3792533_-	type B diterpene cyclase	NA	NA	NA	NA	NA
WP_003417908.1|3792537_3793428_-	diterpene synthase	NA	NA	NA	NA	NA
WP_087902221.1|3795279_3796541_-|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
