assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000276705.2_ASM27670v2	NC_018106	Klebsiella michiganensis E718, complete sequence	1	4814604-4814751	1	CRISPRCasFinder	no		DEDDh,RT,WYL,DinG,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas14j	Orphan	CGCGGACCGGTAGCCCGGGTAAGGAGTTTACGCCGCGACCCGGGAAAAA	49	0	0	NA	NA	NA	1	1	Orphan	DEDDh,RT,WYL,DinG,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas14j	NA,NA	NA|258aa|up_9|NC_018106.1_4800185_4800959_+	PRK10434, srlR, DNA-binding transcriptional repressor	NA|322aa|up_8|NC_018106.1_4800951_4801917_+	PRK11543, gutQ, arabinose-5-phosphate isomerase GutQ	NA|515aa|up_7|NC_018106.1_4801879_4803424_-	PRK05022, PRK05022, nitric oxide reductase transcriptional regulator NorR	NA|482aa|up_6|NC_018106.1_4803611_4805057_+	PRK05452, PRK05452, anaerobic nitric oxide reductase flavorubredoxin; Provisional	NA|378aa|up_5|NC_018106.1_4805053_4806187_+	PRK04965, PRK04965, NADH:flavorubredoxin reductase NorW	NA|338aa|up_4|NC_018106.1_4806418_4807432_-	COG3376, HoxN, High-affinity nickel permease [Inorganic ion transport and metabolism]	NA|176aa|up_3|NC_018106.1_4809674_4810202_-	PRK10330, PRK10330, electron transport protein HydN	NA|338aa|up_2|NC_018106.1_4810336_4811350_-	cd06270, PBP1_GalS-like, ligand binding domain of DNA transcription iso-repressor GalS, which is one of two regulatory proteins involved in galactose transport and metabolism	NA|481aa|up_1|NC_018106.1_4811606_4813049_+	PRK09796, PRK09796, PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC; Provisional	NA|475aa|up_0|NC_018106.1_4813075_4814500_+	PRK09852, PRK09852, cryptic 6-phospho-beta-glucosidase; Provisional	NA|162aa|down_0|NC_018106.1_4814795_4815281_-	PRK11544, hycI, hydrogenase 3 maturation protease; Provisional	NA|137aa|down_1|NC_018106.1_4815273_4815684_-	PRK15084, PRK15084, formate hydrogenlyase maturation protein HycH; Provisional	NA|256aa|down_2|NC_018106.1_4815680_4816448_-	COG3260, COG3260, Ni,Fe-hydrogenase III small subunit [Energy production and conversion]	NA|181aa|down_3|NC_018106.1_4816447_4816990_-	PRK12387, PRK12387, formate hydrogenlyase complex iron-sulfur subunit; Provisional	NA|570aa|down_4|NC_018106.1_4816999_4818709_-	COG3261, HycE, Ni,Fe-hydrogenase III large subunit [Energy production and conversion]	NA|308aa|down_5|NC_018106.1_4818726_4819650_-	COG0650, HyfC, Formate hydrogenlyase subunit 4 [Energy production and conversion]	NA|609aa|down_6|NC_018106.1_4819652_4821479_-	PRK08042, PRK08042, formate hydrogenlyase subunit 3; Reviewed	NA|203aa|down_7|NC_018106.1_4821475_4822084_-	cd10554, HycB_like, HycB, HydN and similar proteins	NA|150aa|down_8|NC_018106.1_4822166_4822616_-	PRK10198, PRK10198, formate hydrogenlyase regulator HycA	NA|115aa|down_9|NC_018106.1_4822824_4823169_+	PRK03681, hypA, hydrogenase/urease nickel incorporation protein HypA
GCF_000276705.2_ASM27670v2	NC_018106	Klebsiella michiganensis E718, complete sequence	2	4903745-4905054	1,1,2	CRT,PILER-CR,CRISPRCasFinder	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	DEDDh,RT,WYL,DinG,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas14j	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29	1	1	4904140-4904171	NC_018106.1_1472754-1472723	I-E:I-E:I-E	21,20,20	21	TypeI-E	DEDDh,RT,WYL,DinG,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas14j	NA|50aa|up_0|NC_018106.1_4903486_4903636_+,NA	NA|160aa|up_9|NC_018106.1_4895734_4896214_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_8|NC_018106.1_4896213_4896924_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|106aa|up_7|NC_018106.1_4896943_4897261_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|109aa|up_6|NC_018106.1_4897401_4897728_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_5|NC_018106.1_4897781_4898387_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|476aa|up_4|NC_018106.1_4898386_4899814_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_3|NC_018106.1_4899823_4900732_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|469aa|up_2|NC_018106.1_4900741_4902148_-	PRK10637, cysG, siroheme synthase CysG	NA|352aa|up_1|NC_018106.1_4902395_4903451_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|50aa|up_0|NC_018106.1_4903486_4903636_+	NA	cas2|98aa|down_0|NC_018106.1_4905148_4905442_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|307aa|down_1|NC_018106.1_4905441_4906362_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|215aa|down_2|NC_018106.1_4906364_4907009_-	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas5|249aa|down_3|NC_018106.1_4906990_4907737_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|353aa|down_4|NC_018106.1_4907746_4908805_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|185aa|down_5|NC_018106.1_4908816_4909371_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|519aa|down_6|NC_018106.1_4909367_4910924_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|887aa|down_7|NC_018106.1_4910935_4913596_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|245aa|down_8|NC_018106.1_4913791_4914526_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|571aa|down_9|NC_018106.1_4914624_4916337_-	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit
GCF_000276705.2_ASM27670v2	NC_018106	Klebsiella michiganensis E718, complete sequence	3	5711031-5711177	3	CRISPRCasFinder	no		DEDDh,RT,WYL,DinG,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas14j	Orphan	CTGCGGTCTGCTCCCGGGGGCGGCGCTTATCGCGCCTTGCCCGGGCTAC	49	0	0	NA	NA	NA	1	1	Orphan	DEDDh,RT,WYL,DinG,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas14j	NA,NA	NA|194aa|up_9|NC_018106.1_5700943_5701525_+	PRK10351, PRK10351, 4'-phosphopantetheinyl transferase AcpT	NA|128aa|up_8|NC_018106.1_5701738_5702122_-	PRK02971, PRK02971, 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional	NA|113aa|up_7|NC_018106.1_5702121_5702460_-	PRK15051, PRK15051, 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional	NA|552aa|up_6|NC_018106.1_5702456_5704112_-	PRK13279, arnT, lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase	NA|301aa|up_5|NC_018106.1_5704111_5705014_-	PRK15394, PRK15394, 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD; Provisional	NA|662aa|up_4|NC_018106.1_5705010_5706996_-	PRK08125, PRK08125, bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA	NA|328aa|up_3|NC_018106.1_5706992_5707976_-	PRK10714, PRK10714, undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional	NA|380aa|up_2|NC_018106.1_5707977_5709117_-	PRK11658, PRK11658, UDP-4-amino-4-deoxy-L-arabinose aminotransferase	NA|169aa|up_1|NC_018106.1_5709516_5710023_-	pfam05870, PA_decarbox, Phenolic acid decarboxylase (PAD)	NA|287aa|up_0|NC_018106.1_5710120_5710981_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|523aa|down_0|NC_018106.1_5711425_5712994_+	TIGR02294, Nickel-binding_periplasmic_protein, nickel ABC transporter, nickel/metallophore periplasmic binding protein	NA|315aa|down_1|NC_018106.1_5712993_5713938_+	PRK10352, PRK10352, nickel transporter permease NikB; Provisional	NA|278aa|down_2|NC_018106.1_5713934_5714768_+	PRK10417, nikC, nickel transporter permease NikC; Provisional	NA|254aa|down_3|NC_018106.1_5714767_5715529_+	PRK10418, nikD, nickel transporter ATP-binding protein NikD; Provisional	NA|257aa|down_4|NC_018106.1_5715528_5716299_+	PRK10419, nikE, nickel ABC transporter ATP-binding protein NikE	NA|139aa|down_5|NC_018106.1_5716304_5716721_+	PRK02967, PRK02967, nickel-responsive transcriptional regulator NikR	NA|186aa|down_6|NC_018106.1_5716771_5717329_-	COG3477, COG3477, Predicted periplasmic/secreted protein [Function unknown]	NA|338aa|down_7|NC_018106.1_5717822_5718836_+	COG2239, MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism]	NA|102aa|down_8|NC_018106.1_5718801_5719107_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|318aa|down_9|NC_018106.1_5719466_5720420_+	cd12173, PGDH_4, Phosphoglycerate dehydrogenases, NAD-binding and catalytic domains
GCF_000276705.2_ASM27670v2	NC_018106	Klebsiella michiganensis E718, complete sequence	4	5966415-5966505	4	CRISPRCasFinder	no		DEDDh,RT,WYL,DinG,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas14j	Orphan	CCGCCTGCGATCGGGTAGCCCGGA	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,RT,WYL,DinG,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas14j	NA,NA	NA|350aa|up_9|NC_018106.1_5956414_5957464_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|318aa|up_8|NC_018106.1_5957460_5958414_-	PRK09393, ftrA, transcriptional activator FtrA; Provisional	NA|260aa|up_7|NC_018106.1_5958428_5959208_-	COG2220, COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only]	NA|185aa|up_6|NC_018106.1_5959377_5959932_+	cd03424, ADPRase_NUDT5, ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate	NA|287aa|up_5|NC_018106.1_5959923_5960784_-	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|270aa|up_4|NC_018106.1_5960808_5961618_-	PRK09861, PRK09861, lipoprotein NlpA	NA|157aa|up_3|NC_018106.1_5961873_5962344_-	pfam07080, DUF1348, Protein of unknown function (DUF1348)	NA|207aa|up_2|NC_018106.1_5962474_5963095_-	COG3576, COG3576, Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase [General function prediction only]	NA|305aa|up_1|NC_018106.1_5963197_5964112_+	cd08471, PBP2_CrgA_like_2, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold	NA|216aa|up_0|NC_018106.1_5965686_5966334_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|139aa|down_0|NC_018106.1_5966549_5966966_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|375aa|down_1|NC_018106.1_5967419_5968544_+	PRK15030, PRK15030, multidrug efflux RND transporter periplasmic adaptor subunit AcrA	NA|1036aa|down_2|NC_018106.1_5968543_5971651_+	TIGR00915, Probable_aminoglycoside_efflux_pump, The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family	NA|455aa|down_3|NC_018106.1_5971654_5973019_+	PRK09837, PRK09837, Cu(I)/Ag(I) efflux RND transporter outer membrane protein	NA|389aa|down_4|NC_018106.1_5973069_5974236_+	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|301aa|down_5|NC_018106.1_5974396_5975299_+	PRK05441, murQ, N-acetylmuramic acid-6-phosphate etherase; Reviewed	NA|478aa|down_6|NC_018106.1_5975323_5976757_+	PRK09586, murP, PTS system N-acetylmuramic acid transporter subunits EIIBC; Reviewed	NA|79aa|down_7|NC_018106.1_5976862_5977099_+	pfam07362, CcdA, Post-segregation antitoxin CcdA	NA|103aa|down_8|NC_018106.1_5977101_5977410_+	pfam01845, CcdB, CcdB protein	NA|301aa|down_9|NC_018106.1_5977560_5978463_+	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter
