assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000270365.1_ASM27036v1	NC_017522	Mycobacterium tuberculosis CCDC5180, complete sequence	1	331990-332349	1	CRT	no		csa3,cas3,DinG,WYL,cas4,DEDDh,c2c9_V-U4,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGGCGCCGCCGGCGCCGCCG	24	0	0	NA	NA	NA	6	6	Orphan	csa3,cas3,DinG,WYL,cas4,DEDDh,c2c9_V-U4,csm3gr7,csm2gr11,cas10,cas6	NA,NA	NA|86aa|up_9|NC_017522.1_321032_321290_-	COG2161, StbD, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|398aa|up_8|NC_017522.1_321606_322800_-	COG3285, COG3285, Predicted eukaryotic-type DNA primase [DNA replication, recombination, and repair]	NA|561aa|up_7|NC_017522.1_322835_324518_+	PRK07788, PRK07788, acyl-CoA synthetase; Validated	NA|732aa|up_6|NC_017522.1_324534_326730_-	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|378aa|up_5|NC_017522.1_326843_327977_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|207aa|up_4|NC_017522.1_327973_328594_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|194aa|up_3|NC_017522.1_328690_329272_+	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	NA|242aa|up_2|NC_017522.1_329201_329927_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|307aa|up_1|NC_017522.1_330016_330937_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	NA|143aa|up_0|NC_017522.1_330976_331405_-	cd18678, PIN_MtVapC25_VapC33-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC25, VapC33, and related proteins	NA|537aa|down_0|NC_017522.1_335225_336836_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|303aa|down_1|NC_017522.1_336859_337768_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|614aa|down_2|NC_017522.1_338045_339887_+	TIGR03922, T7SS_EccA, type VII secretion AAA-ATPase EccA	NA|539aa|down_3|NC_017522.1_339883_341500_+	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B	NA|1331aa|down_4|NC_017522.1_341496_345489_+	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|103aa|down_5|NC_017522.1_345485_345794_+	pfam00934, PE, PE family	NA|98aa|down_6|NC_017522.1_347387_347681_+	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target	NA|97aa|down_7|NC_017522.1_347710_348001_+	COG4842, COG4842, Uncharacterized protein conserved in bacteria [Function unknown]	NA|296aa|down_8|NC_017522.1_348011_348899_+	pfam14011, ESX-1_EspG, EspG family	NA|473aa|down_9|NC_017522.1_348945_350364_+	TIGR03920, T7SS_EccD, type VII secretion integral membrane protein EccD
GCF_000270365.1_ASM27036v1	NC_017522	Mycobacterium tuberculosis CCDC5180, complete sequence	2	362326-363024	1	CRISPRCasFinder	no		csa3,cas3,DinG,WYL,cas4,DEDDh,c2c9_V-U4,csm3gr7,csm2gr11,cas10,cas6	Orphan	TTCGCGAAGCCGATGTTGTAGCTGCCGGTGTTG	33	2	2	362614-362655|362689-362721	NC_017522.1_370645-370686|NC_017522.1_369460-369492	NA	10	10	Orphan	csa3,cas3,DinG,WYL,cas4,DEDDh,c2c9_V-U4,csm3gr7,csm2gr11,cas10,cas6	NA|101aa|up_4|NC_017522.1_359338_359641_+,NA|161aa|down_1|NC_017522.1_372434_372917_-,NA|410aa|down_5|NC_017522.1_375033_376263_+	NA|262aa|up_9|NC_017522.1_354033_354819_+	PRK14103, PRK14103, trans-aconitate 2-methyltransferase; Provisional	NA|268aa|up_8|NC_017522.1_354807_355611_-	COG4424, COG4424, Uncharacterized protein conserved in bacteria [Function unknown]	NA|466aa|up_7|NC_017522.1_355620_357018_-	cd16027, SGSH, N-sulfoglucosamine sulfohydrolase (SGSH; sulfamidase)	NA|592aa|up_6|NC_017522.1_357196_358972_+	pfam00934, PE, PE family	NA|76aa|up_5|NC_017522.1_359114_359342_+	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|101aa|up_4|NC_017522.1_359338_359641_+	NA	NA|74aa|up_3|NC_017522.1_359688_359910_+	PHA01748, PHA01748, hypothetical protein	NA|142aa|up_2|NC_017522.1_359906_360332_+	cd18755, PIN_MtVapC3_VapC21-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC3, VapC21 and related proteins	NA|211aa|up_1|NC_017522.1_360467_361100_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|303aa|up_0|NC_017522.1_361096_362005_+	cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs	NA|224aa|down_0|NC_017522.1_371775_372447_+	TIGR02476, BluB, 5,6-dimethylbenzimidazole synthase	NA|161aa|down_1|NC_017522.1_372434_372917_-	NA	NA|239aa|down_2|NC_017522.1_372974_373691_+	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|219aa|down_3|NC_017522.1_373792_374449_+	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown]	NA|164aa|down_4|NC_017522.1_374518_375010_-	pfam13577, SnoaL_4, SnoaL-like domain	NA|410aa|down_5|NC_017522.1_375033_376263_+	NA	NA|621aa|down_6|NC_017522.1_376417_378280_+	COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones]	NA|129aa|down_7|NC_017522.1_378351_378738_+	COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones]	NA|212aa|down_8|NC_017522.1_378740_379376_-	pfam11259, DUF3060, Protein of unknown function (DUF3060)	NA|205aa|down_9|NC_017522.1_380398_381013_+	COG4829, CatC1, Muconolactone delta-isomerase [Secondary metabolites biosynthesis, transport, and catabolism]
GCF_000270365.1_ASM27036v1	NC_017522	Mycobacterium tuberculosis CCDC5180, complete sequence	3	687745-687821	2	CRISPRCasFinder	no		csa3,cas3,DinG,WYL,cas4,DEDDh,c2c9_V-U4,csm3gr7,csm2gr11,cas10,cas6	Orphan	TGAGGTGCGGCGTGAGCGCGGGT	23	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DinG,WYL,cas4,DEDDh,c2c9_V-U4,csm3gr7,csm2gr11,cas10,cas6	NA,NA	NA|72aa|up_9|NC_017522.1_673426_673642_+	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|136aa|up_8|NC_017522.1_673638_674046_+	cd18696, PIN_MtVapC26-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC26 and related proteins	NA|229aa|up_7|NC_017522.1_674105_674792_-	pfam10738, Lpp-LpqN, Probable lipoprotein LpqN	NA|878aa|up_6|NC_017522.1_674945_677579_+	COG3537, COG3537, Putative alpha-1,2-mannosidase [Carbohydrate transport and metabolism]	NA|796aa|up_5|NC_017522.1_677601_679989_-	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region	NA|241aa|up_4|NC_017522.1_680126_680849_+	COG2186, FadR, Transcriptional regulators [Transcription]	NA|266aa|up_3|NC_017522.1_680845_681643_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|296aa|up_2|NC_017522.1_681644_682532_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|405aa|up_1|NC_017522.1_682537_683752_+	pfam11887, Mce4_CUP1, Cholesterol uptake porter CUP1 of Mce4, putative	NA|482aa|up_0|NC_017522.1_684777_686223_+	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|517aa|down_0|NC_017522.1_688956_690507_+	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|131aa|down_1|NC_017522.1_690558_690951_-	cd18768, PIN_MtVapC4-C5-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC4, VapC5, and related proteins	NA|86aa|down_2|NC_017522.1_690947_691205_-	COG4118, Phd, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|412aa|down_3|NC_017522.1_691387_692623_-	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|138aa|down_4|NC_017522.1_692873_693287_-	cd18681, PIN_MtVapC27-VapC40_like, VapC-like PIN domain of Mycobacterium tuberculosis VapC27, and VapC40, and related proteins	NA|79aa|down_5|NC_017522.1_693283_693520_-	COG2002, AbrB, Regulators of stationary/sporulation gene expression [Transcription]	NA|169aa|down_6|NC_017522.1_693623_694130_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|177aa|down_7|NC_017522.1_694243_694774_-	PRK10755, PRK10755, two-component system sensor histidine kinase PmrB	NA|254aa|down_8|NC_017522.1_694757_695519_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|70aa|down_9|NC_017522.1_695678_695888_+	pfam03413, PepSY, Peptidase propeptide and YPEB domain
GCF_000270365.1_ASM27036v1	NC_017522	Mycobacterium tuberculosis CCDC5180, complete sequence	4	922762-923709	2	CRT	no	csa3	csa3,cas3,DinG,WYL,cas4,DEDDh,c2c9_V-U4,csm3gr7,csm2gr11,cas10,cas6	Type I-A	CGGGGCCGGCGGNNCCGGCGG	21	1	3	923545-923580|923545-923580|923545-923580	NC_017522.1_670846-670811|NC_017522.1_1208550-1208585|NC_017522.1_2416217-2416182	NA	19	19	Orphan	csa3,cas3,DinG,WYL,cas4,DEDDh,c2c9_V-U4,csm3gr7,csm2gr11,cas10,cas6	NA,NA|184aa|down_1|NC_017522.1_927718_928270_-	NA|685aa|up_9|NC_017522.1_910401_912456_-	TIGR00350, Transcriptional_regulator_LytR, cell envelope-related function transcriptional attenuator common domain	NA|389aa|up_8|NC_017522.1_912621_913788_-	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family	NA|339aa|up_7|NC_017522.1_913875_914892_-	cd01050, Acyl_ACP_Desat, Acyl ACP desaturase, ferritin-like diiron-binding domain	NA|214aa|up_6|NC_017522.1_915053_915695_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|352aa|up_5|NC_017522.1_915775_916831_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	csa3|131aa|up_4|NC_017522.1_916882_917275_-	smart00418, HTH_ARSR, helix_turn_helix, Arsenical Resistance Operon Repressor	NA|141aa|up_3|NC_017522.1_917332_917755_-	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis]	NA|302aa|up_2|NC_017522.1_918111_919017_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|272aa|up_1|NC_017522.1_919035_919851_-	TIGR04255, hypothetical_protein, TIGR04255 family protein	NA|138aa|up_0|NC_017522.1_921092_921506_+	pfam00934, PE, PE family	NA|215aa|down_0|NC_017522.1_927093_927738_+	pfam14032, PknH_C, PknH-like extracellular domain	NA|184aa|down_1|NC_017522.1_927718_928270_-	NA	NA|241aa|down_2|NC_017522.1_928350_929073_-	COG4849, COG4849, Predicted nucleotidyltransferase [General function prediction    only]	NA|343aa|down_3|NC_017522.1_929143_930172_-	COG4861, COG4861, Uncharacterized protein conserved in bacteria [Function unknown]	NA|257aa|down_4|NC_017522.1_930860_931631_+	pfam01427, Peptidase_M15, D-ala-D-ala dipeptidase	NA|271aa|down_5|NC_017522.1_931717_932530_+	pfam13847, Methyltransf_31, Methyltransferase domain	NA|287aa|down_6|NC_017522.1_932597_933458_-	TIGR01250, Proline_iminopeptidase, proline-specific peptidase, Bacillus coagulans-type subfamily	NA|431aa|down_7|NC_017522.1_934252_935545_+	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|335aa|down_8|NC_017522.1_935528_936533_+	COG1071, AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion]	NA|217aa|down_9|NC_017522.1_936596_937247_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]
GCF_000270365.1_ASM27036v1	NC_017522	Mycobacterium tuberculosis CCDC5180, complete sequence	5	960722-960973	1	PILER-CR	no		csa3,cas3,DinG,WYL,cas4,DEDDh,c2c9_V-U4,csm3gr7,csm2gr11,cas10,cas6	Orphan	CGGGTGGTGCCAGGTCGGCGGGCGCGGGTGGCGCCAGTTCGGCGGGCGCGGGTGGCGCCAGGT	63	1	1	960895-960950	NC_017522.1_961023-961078	NA	2	2	Orphan	csa3,cas3,DinG,WYL,cas4,DEDDh,c2c9_V-U4,csm3gr7,csm2gr11,cas10,cas6	NA|67aa|up_3|NC_017522.1_958820_959021_+,NA	NA|151aa|up_9|NC_017522.1_949418_949871_+	cd07819, SRPBCC_2, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins	NA|398aa|up_8|NC_017522.1_949867_951061_-	PRK07777, PRK07777, putative succinyldiaminopimelate transaminase DapC	NA|404aa|up_7|NC_017522.1_951217_952429_+	PRK08242, PRK08242, acetyl-CoA C-acetyltransferase	NA|721aa|up_6|NC_017522.1_952433_954596_+	PRK11730, fadB, fatty acid oxidation complex subunit alpha FadB	NA|550aa|up_5|NC_017522.1_954663_956313_-	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair]	NA|757aa|up_4|NC_017522.1_956482_958753_-	pfam13625, Helicase_C_3, Helicase conserved C-terminal domain	NA|67aa|up_3|NC_017522.1_958820_959021_+	NA	NA|168aa|up_2|NC_017522.1_959030_959534_+	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC	NA|161aa|up_1|NC_017522.1_959530_960013_+	cd00886, MogA_MoaB, MogA_MoaB family	NA|142aa|up_0|NC_017522.1_960009_960435_+	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism]	NA|93aa|down_0|NC_017522.1_962123_962402_-	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins	NA|361aa|down_1|NC_017522.1_962405_963488_-	PRK00164, moaA, GTP 3',8-cyclase MoaA	NA|130aa|down_2|NC_017522.1_963484_963874_-	PRK11770, PRK11770, YccF domain-containing protein	NA|136aa|down_3|NC_017522.1_964038_964446_+	COG1278, CspC, Cold shock proteins [Transcription]	NA|651aa|down_4|NC_017522.1_964442_966395_-	pfam00934, PE, PE family	NA|651aa|down_5|NC_017522.1_966655_968608_+	cd01161, VLCAD, Very long chain acyl-CoA dehydrogenase	NA|387aa|down_6|NC_017522.1_968696_969857_-	COG4398, COG4398, Uncharacterized protein conserved in bacteria [Function unknown]	NA|163aa|down_7|NC_017522.1_969956_970445_-	pfam10969, DUF2771, Protein of unknown function (DUF2771)	NA|549aa|down_8|NC_017522.1_970441_972088_-	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|263aa|down_9|NC_017522.1_972225_973014_+	pfam11228, DUF3027, Protein of unknown function (DUF3027)
GCF_000270365.1_ASM27036v1	NC_017522	Mycobacterium tuberculosis CCDC5180, complete sequence	6	1569882-1570954	3	CRISPRCasFinder	no		csa3,cas3,DinG,WYL,cas4,DEDDh,c2c9_V-U4,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGTTGCCGCCGGCACCGCCGTCGCCGAT	32	1	1	1570082-1570103	NC_017522.1_1208442-1208421	NA	15	15	Orphan	csa3,cas3,DinG,WYL,cas4,DEDDh,c2c9_V-U4,csm3gr7,csm2gr11,cas10,cas6	NA|106aa|up_7|NC_017522.1_1561645_1561963_+,NA	NA|103aa|up_9|NC_017522.1_1559160_1559469_+	pfam00934, PE, PE family	NA|540aa|up_8|NC_017522.1_1559465_1561085_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|106aa|up_7|NC_017522.1_1561645_1561963_+	NA	NA|209aa|up_6|NC_017522.1_1562097_1562724_+	PRK00300, gmk, guanylate kinase; Provisional	NA|111aa|up_5|NC_017522.1_1562789_1563122_+	TIGR00690, DNA-directed_RNA_polymerase_subunit_omega, DNA-directed RNA polymerase, omega subunit	NA|419aa|up_4|NC_017522.1_1563137_1564394_+	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated	NA|404aa|up_3|NC_017522.1_1564521_1565733_+	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|493aa|up_2|NC_017522.1_1565805_1567284_-	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|462aa|up_1|NC_017522.1_1567280_1568666_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|345aa|up_0|NC_017522.1_1568743_1569778_+	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|134aa|down_0|NC_017522.1_1571808_1572210_-	cd18741, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily	NA|86aa|down_1|NC_017522.1_1572206_1572464_-	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|320aa|down_2|NC_017522.1_1572546_1573506_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|321aa|down_3|NC_017522.1_1573530_1574493_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|246aa|down_4|NC_017522.1_1574491_1575229_+	COG3714, COG3714, Predicted membrane protein [Function unknown]	NA|656aa|down_5|NC_017522.1_1575309_1577277_+	PRK14873, PRK14873, primosomal protein N'	NA|275aa|down_6|NC_017522.1_1577294_1578119_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|161aa|down_7|NC_017522.1_1578287_1578770_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|275aa|down_8|NC_017522.1_1578841_1579666_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|313aa|down_9|NC_017522.1_1579862_1580801_+	PRK00005, fmt, methionyl-tRNA formyltransferase; Reviewed
GCF_000270365.1_ASM27036v1	NC_017522	Mycobacterium tuberculosis CCDC5180, complete sequence	7	1634462-1634791	3	CRT	no		csa3,cas3,DinG,WYL,cas4,DEDDh,c2c9_V-U4,csm3gr7,csm2gr11,cas10,cas6	Orphan	NGCCGCCGGCNCCGCCGN	18	0	0	NA	NA	NA	6	6	Orphan	csa3,cas3,DinG,WYL,cas4,DEDDh,c2c9_V-U4,csm3gr7,csm2gr11,cas10,cas6	NA|38aa|up_8|NC_017522.1_1620823_1620937_-,NA|137aa|up_7|NC_017522.1_1620986_1621397_-,NA|288aa|down_2|NC_017522.1_1638382_1639246_+	NA|155aa|up_9|NC_017522.1_1619906_1620371_-	cd07820, SRPBCC_3, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins	NA|38aa|up_8|NC_017522.1_1620823_1620937_-	NA	NA|137aa|up_7|NC_017522.1_1620986_1621397_-	NA	NA|248aa|up_6|NC_017522.1_1621413_1622157_-	pfam01182, Glucosamine_iso, Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase	NA|305aa|up_5|NC_017522.1_1622153_1623068_-	TIGR00534, Putative_OxPP_cycle_protein_OpcA, glucose-6-phosphate dehydrogenase assembly protein OpcA	NA|515aa|up_4|NC_017522.1_1623120_1624665_-	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated	NA|374aa|up_3|NC_017522.1_1624661_1625783_-	PRK03343, PRK03343, transaldolase; Validated	NA|701aa|up_2|NC_017522.1_1625799_1627902_-	COG0021, TktA, Transketolase [Carbohydrate transport and metabolism]	NA|1330aa|up_1|NC_017522.1_1628340_1632330_-	pfam00934, PE, PE family	NA|309aa|up_0|NC_017522.1_1632731_1633658_+	PRK04375, PRK04375, protoheme IX farnesyltransferase; Provisional	NA|422aa|down_0|NC_017522.1_1636083_1637349_+	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]	NA|329aa|down_1|NC_017522.1_1637376_1638363_-	cd05286, QOR2, Quinone oxidoreductase (QOR)	NA|288aa|down_2|NC_017522.1_1638382_1639246_+	NA	NA|311aa|down_3|NC_017522.1_1639195_1640128_-	COG1612, CtaA, Uncharacterized protein required for cytochrome oxidase assembly [Posttranslational modification, protein turnover, chaperones]	NA|262aa|down_4|NC_017522.1_1640239_1641025_-	TIGR00025, Mtu_efflux, ABC transporter efflux protein, DrrB family	NA|314aa|down_5|NC_017522.1_1641021_1641963_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|592aa|down_6|NC_017522.1_1642118_1643894_-	TIGR03459, crt_membr, carotene biosynthesis associated membrane protein	NA|269aa|down_7|NC_017522.1_1643941_1644748_+	COG2345, COG2345, Predicted transcriptional regulator [Transcription]	NA|847aa|down_8|NC_017522.1_1644744_1647285_+	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB	NA|398aa|down_9|NC_017522.1_1647281_1648475_+	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]
GCF_000270365.1_ASM27036v1	NC_017522	Mycobacterium tuberculosis CCDC5180, complete sequence	8	2069025-2069279	4	CRT	no		csa3,cas3,DinG,WYL,cas4,DEDDh,c2c9_V-U4,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCCNCCGTCGCCGCCNNTGCC	21	2	3	2069106-2069123|2069106-2069123|2069196-2069213	NC_017522.1_396943-396926|NC_017522.1_603113-603096|NC_017522.1_3434050-3434033	NA	5	5	Orphan	csa3,cas3,DinG,WYL,cas4,DEDDh,c2c9_V-U4,csm3gr7,csm2gr11,cas10,cas6	NA|88aa|up_0|NC_017522.1_2068383_2068647_-,NA	NA|248aa|up_9|NC_017522.1_2053870_2054614_+	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators	NA|165aa|up_8|NC_017522.1_2054732_2055227_+	pfam02577, DNase-RNase, Bifunctional nuclease	NA|211aa|up_7|NC_017522.1_2055619_2056252_+	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators	NA|287aa|up_6|NC_017522.1_2059663_2060524_-	PRK03204, PRK03204, haloalkane dehalogenase; Provisional	NA|289aa|up_5|NC_017522.1_2060564_2061431_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|629aa|up_4|NC_017522.1_2061435_2063322_-	TIGR00976, Hypothetical_protein_Rv1835c/MT1883/Mb1866c	NA|678aa|up_3|NC_017522.1_2063337_2065371_-	cd01456, vWA_ywmD_type, VWA ywmD type:Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|742aa|up_2|NC_017522.1_2065490_2067716_-	PRK02999, PRK02999, malate synthase G; Provisional	NA|132aa|up_1|NC_017522.1_2067991_2068387_-	COG1848, COG1848, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]	NA|88aa|up_0|NC_017522.1_2068383_2068647_-	NA	NA|346aa|down_0|NC_017522.1_2070416_2071454_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|456aa|down_1|NC_017522.1_2071453_2072821_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|480aa|down_2|NC_017522.1_2072994_2074434_-	PRK07807, PRK07807, GuaB1 family IMP dehydrogenase-related protein	NA|484aa|down_3|NC_017522.1_2074466_2075918_-	PRK09287, PRK09287, NADP-dependent phosphogluconate dehydrogenase	NA|317aa|down_4|NC_017522.1_2075947_2076898_-	cd07326, M56_BlaR1_MecR1_like, Peptidase M56-like including those in BlaR1 and MecR1, integral membrane metallopeptidase	NA|141aa|down_5|NC_017522.1_2077607_2078030_+	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria	NA|101aa|down_6|NC_017522.1_2078078_2078381_+	pfam00547, Urease_gamma, Urease, gamma subunit	NA|105aa|down_7|NC_017522.1_2078377_2078692_+	PRK13202, ureB, urease subunit beta; Reviewed	NA|578aa|down_8|NC_017522.1_2078691_2080425_+	PRK13206, ureC, urease subunit alpha; Reviewed	NA|212aa|down_9|NC_017522.1_2080424_2081060_+	COG0830, UreF, Urease accessory protein UreF [Posttranslational modification, protein turnover, chaperones]
GCF_000270365.1_ASM27036v1	NC_017522	Mycobacterium tuberculosis CCDC5180, complete sequence	9	2150315-2150534	4	CRISPRCasFinder	no		csa3,cas3,DinG,WYL,cas4,DEDDh,c2c9_V-U4,csm3gr7,csm2gr11,cas10,cas6	Orphan	GTGCCAGCCGGAATCGTGATCGGCGGAACCGTCACCGACGGAATACTCA	49	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DinG,WYL,cas4,DEDDh,c2c9_V-U4,csm3gr7,csm2gr11,cas10,cas6	NA|136aa|up_2|NC_017522.1_2140709_2141117_-,NA|127aa|down_5|NC_017522.1_2158050_2158431_-	NA|155aa|up_9|NC_017522.1_2134037_2134502_-	pfam14081, DUF4262, Domain of unknown function (DUF4262)	NA|741aa|up_8|NC_017522.1_2134677_2136900_-	PRK15061, PRK15061, catalase/peroxidase	NA|148aa|up_7|NC_017522.1_2136937_2137381_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|198aa|up_6|NC_017522.1_2137494_2138088_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|202aa|up_5|NC_017522.1_2138170_2138776_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|335aa|up_4|NC_017522.1_2138875_2139880_-	cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family	NA|251aa|up_3|NC_017522.1_2139979_2140732_+	cd16282, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|136aa|up_2|NC_017522.1_2140709_2141117_-	NA	NA|767aa|up_1|NC_017522.1_2141251_2143552_+	PLN02892, PLN02892, isocitrate lyase	NA|1697aa|up_0|NC_017522.1_2143721_2148812_-	pfam00823, PPE, PPE family	NA|155aa|down_0|NC_017522.1_2152561_2153026_-	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|288aa|down_1|NC_017522.1_2153123_2153987_+	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like	NA|424aa|down_2|NC_017522.1_2154024_2155296_-	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|372aa|down_3|NC_017522.1_2155567_2156683_+	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms]	NA|447aa|down_4|NC_017522.1_2156673_2158014_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|127aa|down_5|NC_017522.1_2158050_2158431_-	NA	NA|621aa|down_6|NC_017522.1_2158587_2160450_+	PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional	NA|160aa|down_7|NC_017522.1_2160457_2160937_-	pfam09167, DUF1942, Domain of unknown function (DUF1942)	NA|258aa|down_8|NC_017522.1_2161173_2161947_+	COG3361, COG3361, Uncharacterized conserved protein [Function unknown]	NA|256aa|down_9|NC_017522.1_2161950_2162718_-	PRK05867, PRK05867, SDR family oxidoreductase
GCF_000270365.1_ASM27036v1	NC_017522	Mycobacterium tuberculosis CCDC5180, complete sequence	10	2682978-2683622	5	CRT	no		csa3,cas3,DinG,WYL,cas4,DEDDh,c2c9_V-U4,csm3gr7,csm2gr11,cas10,cas6	Orphan	GNCGGCGGCNNCGGCGGN	18	1	1	2683530-2683556	NC_017522.1_331893-331867	NA	10	10	Orphan	csa3,cas3,DinG,WYL,cas4,DEDDh,c2c9_V-U4,csm3gr7,csm2gr11,cas10,cas6	NA|186aa|up_7|NC_017522.1_2673485_2674043_-,NA|72aa|up_1|NC_017522.1_2682000_2682216_+,NA|55aa|up_0|NC_017522.1_2682327_2682492_+,NA|110aa|down_4|NC_017522.1_2687504_2687834_+,NA|68aa|down_5|NC_017522.1_2687818_2688022_-	NA|391aa|up_9|NC_017522.1_2671791_2672964_-	PRK05628, PRK05628, coproporphyrinogen III oxidase; Validated	NA|155aa|up_8|NC_017522.1_2673024_2673489_-	pfam06737, Transglycosylas, Transglycosylase-like domain	NA|186aa|up_7|NC_017522.1_2673485_2674043_-	NA	NA|556aa|up_6|NC_017522.1_2674479_2676147_+	COG0155, CysI, Sulfite reductase, beta subunit (hemoprotein) [Inorganic ion transport and metabolism]	NA|255aa|up_5|NC_017522.1_2676143_2676908_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|282aa|up_4|NC_017522.1_2676904_2677750_+	COG2138, COG2138, Sirohydrochlorin ferrochelatase [Inorganic ion transport and metabolism]	NA|644aa|up_3|NC_017522.1_2677786_2679718_+	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism]	NA|668aa|up_2|NC_017522.1_2679848_2681852_+	TIGR00733, TIGR00733, putative oligopeptide transporter, OPT family	NA|72aa|up_1|NC_017522.1_2682000_2682216_+	NA	NA|55aa|up_0|NC_017522.1_2682327_2682492_+	NA	NA|352aa|down_0|NC_017522.1_2683685_2684741_-	TIGR00968, 3a0106s01, sulfate ABC transporter, ATP-binding protein	NA|273aa|down_1|NC_017522.1_2684757_2685576_-	TIGR02140, Sulfate_transport_system_permease_protein_CysW, sulfate ABC transporter, permease protein CysW	NA|284aa|down_2|NC_017522.1_2685572_2686424_-	COG0555, CysU, ABC-type sulfate transport system, permease component [Posttranslational modification, protein turnover, chaperones]	NA|357aa|down_3|NC_017522.1_2686420_2687491_-	COG1613, Sbp, ABC-type sulfate transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|110aa|down_4|NC_017522.1_2687504_2687834_+	NA	NA|68aa|down_5|NC_017522.1_2687818_2688022_-	NA	NA|661aa|down_6|NC_017522.1_2688251_2690234_+	COG3387, SGA1, Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism]	NA|252aa|down_7|NC_017522.1_2690311_2691067_-	pfam14032, PknH_C, PknH-like extracellular domain	NA|654aa|down_8|NC_017522.1_2691063_2693025_-	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|201aa|down_9|NC_017522.1_2693012_2693615_+	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system
GCF_000270365.1_ASM27036v1	NC_017522	Mycobacterium tuberculosis CCDC5180, complete sequence	11	3106282-3107429	2,5,6,3	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	c2c9_V-U4,csm3gr7,csm2gr11,cas10,cas6	csa3,cas3,DinG,WYL,cas4,DEDDh,c2c9_V-U4,csm3gr7,csm2gr11,cas10,cas6	Type III-D,Type III-A,Type III-C,Type III-B	GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	36,36,36,36	0	0	NA	NA	II-B,III-A:II-B,III-A:II-B,III-A:II-B,III-A	13,14,15,13	15	TypeIII-D,TypeIII-A,TypeIII-C,TypeIII-B	csa3,cas3,DinG,WYL,cas4,DEDDh,c2c9_V-U4,csm3gr7,csm2gr11,cas10,cas6	NA|85aa|up_7|NC_017522.1_3099561_3099816_-,NA|135aa|up_6|NC_017522.1_3099963_3100368_+,NA|64aa|up_5|NC_017522.1_3100364_3100556_+,NA|86aa|up_4|NC_017522.1_3102142_3102400_+,NA|104aa|up_3|NC_017522.1_3102504_3102816_+,NA|203aa|up_2|NC_017522.1_3103235_3103844_+,NA	NA|348aa|up_9|NC_017522.1_3097876_3098920_-	COG5586, COG5586, Uncharacterized conserved protein [Function unknown]	NA|92aa|up_8|NC_017522.1_3099110_3099386_+	COG4453, COG4453, Uncharacterized protein conserved in bacteria [Function unknown]	NA|85aa|up_7|NC_017522.1_3099561_3099816_-	NA	NA|135aa|up_6|NC_017522.1_3099963_3100368_+	NA	NA|64aa|up_5|NC_017522.1_3100364_3100556_+	NA	NA|86aa|up_4|NC_017522.1_3102142_3102400_+	NA	NA|104aa|up_3|NC_017522.1_3102504_3102816_+	NA	NA|203aa|up_2|NC_017522.1_3103235_3103844_+	NA	NA|470aa|up_1|NC_017522.1_3103914_3105324_+	pfam00665, rve, Integrase core domain	NA|271aa|up_0|NC_017522.1_3105320_3106133_+	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]	NA|421aa|down_0|NC_017522.1_3107460_3108722_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	csm3gr7|237aa|down_1|NC_017522.1_3109085_3109796_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|125aa|down_2|NC_017522.1_3109805_3110180_-	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2	cas10|813aa|down_3|NC_017522.1_3110176_3112615_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	cas6|263aa|down_4|NC_017522.1_3112611_3113400_-	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	NA|182aa|down_5|NC_017522.1_3113733_3114279_-	COG4293, COG4293, Uncharacterized protein conserved in bacteria [Function unknown]	NA|295aa|down_6|NC_017522.1_3114550_3115435_-	COG2253, COG2253, Uncharacterized conserved protein [Function unknown]	NA|296aa|down_7|NC_017522.1_3115437_3116325_-	pfam09407, AbiEi_1, AbiEi antitoxin C-terminal domain	NA|182aa|down_8|NC_017522.1_3116629_3117175_-	COG4293, COG4293, Uncharacterized protein conserved in bacteria [Function unknown]	NA|90aa|down_9|NC_017522.1_3117171_3117441_-	COG5552, COG5552, Uncharacterized conserved protein [Function unknown]
GCF_000270365.1_ASM27036v1	NC_017522	Mycobacterium tuberculosis CCDC5180, complete sequence	12	3733848-3734527	7	CRT	no		csa3,cas3,DinG,WYL,cas4,DEDDh,c2c9_V-U4,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGNNNCCNCCGTNGCCGCC	23	0	0	NA	NA	NA	9	9	Orphan	csa3,cas3,DinG,WYL,cas4,DEDDh,c2c9_V-U4,csm3gr7,csm2gr11,cas10,cas6	NA,NA|96aa|down_4|NC_017522.1_3748568_3748856_-	NA|147aa|up_9|NC_017522.1_3712649_3713090_+	cd04770, HTH_HMRTR, Helix-Turn-Helix DNA binding domain of Heavy Metal Resistance transcription regulators	NA|290aa|up_8|NC_017522.1_3713123_3713993_-	TIGR00766, Uncharacterized_protein_Dda3937_02003, inner membrane protein YhjD	NA|337aa|up_7|NC_017522.1_3714013_3715024_-	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed	NA|215aa|up_6|NC_017522.1_3715296_3715941_+	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional	NA|410aa|up_5|NC_017522.1_3716007_3717237_-	PRK08299, PRK08299, NADP-dependent isocitrate dehydrogenase	NA|450aa|up_4|NC_017522.1_3717519_3718869_+	PRK07812, PRK07812, O-acetylhomoserine aminocarboxypropyltransferase; Validated	NA|380aa|up_3|NC_017522.1_3718880_3720020_+	PRK00175, metX, homoserine O-acetyltransferase; Provisional	NA|244aa|up_2|NC_017522.1_3720016_3720748_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|3114aa|up_1|NC_017522.1_3720756_3730098_-	pfam00823, PPE, PPE family	NA|339aa|up_0|NC_017522.1_3730146_3731163_-	pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal	NA|86aa|down_0|NC_017522.1_3736438_3736696_-	pfam11222, DUF3017, Protein of unknown function (DUF3017)	NA|3158aa|down_1|NC_017522.1_3736951_3746425_-	pfam00823, PPE, PPE family	NA|149aa|down_2|NC_017522.1_3747050_3747497_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|247aa|down_3|NC_017522.1_3747533_3748274_-	pfam01610, DDE_Tnp_ISL3, Transposase	NA|96aa|down_4|NC_017522.1_3748568_3748856_-	NA	NA|3717aa|down_5|NC_017522.1_3749192_3760343_-	pfam00823, PPE, PPE family	NA|130aa|down_6|NC_017522.1_3762351_3762741_+	pfam05305, DUF732, Protein of unknown function (DUF732)	NA|98aa|down_7|NC_017522.1_3762754_3763048_-	pfam11222, DUF3017, Protein of unknown function (DUF3017)	NA|282aa|down_8|NC_017522.1_3763044_3763890_-	PRK14193, PRK14193, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	NA|92aa|down_9|NC_017522.1_3764013_3764289_+	COG2161, StbD, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]
GCF_000270365.1_ASM27036v1	NC_017522	Mycobacterium tuberculosis CCDC5180, complete sequence	13	3841275-3841364	6	CRISPRCasFinder	no		csa3,cas3,DinG,WYL,cas4,DEDDh,c2c9_V-U4,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCAGGCGTTGGGCTGGCTGCCGAT	24	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DinG,WYL,cas4,DEDDh,c2c9_V-U4,csm3gr7,csm2gr11,cas10,cas6	NA|77aa|up_6|NC_017522.1_3833311_3833542_+,NA|121aa|up_5|NC_017522.1_3833645_3834008_-,NA|121aa|down_0|NC_017522.1_3842349_3842712_-,NA|52aa|down_2|NC_017522.1_3844554_3844710_-,NA|52aa|down_3|NC_017522.1_3844734_3844890_-,NA|238aa|down_6|NC_017522.1_3848925_3849639_-	NA|212aa|up_9|NC_017522.1_3830990_3831626_-	COG1214, COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]	NA|169aa|up_8|NC_017522.1_3831622_3832129_-	COG0802, COG0802, Predicted ATPase or kinase [General function prediction only]	NA|387aa|up_7|NC_017522.1_3832125_3833286_-	PRK00053, alr, alanine racemase; Reviewed	NA|77aa|up_6|NC_017522.1_3833311_3833542_+	NA	NA|121aa|up_5|NC_017522.1_3833645_3834008_-	NA	NA|177aa|up_4|NC_017522.1_3834966_3835497_+	pfam00823, PPE, PPE family	NA|252aa|up_3|NC_017522.1_3835814_3836570_-	COG1484, DnaC, DNA replication protein [DNA replication, recombination, and repair]	NA|421aa|up_2|NC_017522.1_3836653_3837915_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|100aa|up_1|NC_017522.1_3840053_3840353_+	pfam00934, PE, PE family	NA|181aa|up_0|NC_017522.1_3840438_3840981_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|121aa|down_0|NC_017522.1_3842349_3842712_-	NA	NA|179aa|down_1|NC_017522.1_3842874_3843411_+	pfam00823, PPE, PPE family	NA|52aa|down_2|NC_017522.1_3844554_3844710_-	NA	NA|52aa|down_3|NC_017522.1_3844734_3844890_-	NA	NA|461aa|down_4|NC_017522.1_3846082_3847465_-	TIGR01788, Glutamate_decarboxylase_alpha_GAD-alpha	NA|474aa|down_5|NC_017522.1_3847502_3848924_-	pfam01256, Carb_kinase, Carbohydrate kinase	NA|238aa|down_6|NC_017522.1_3848925_3849639_-	NA	NA|285aa|down_7|NC_017522.1_3849649_3850504_-	pfam14494, DUF4436, Domain of unknown function (DUF4436)	NA|625aa|down_8|NC_017522.1_3850725_3852600_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|159aa|down_9|NC_017522.1_3852621_3853098_+	pfam10708, DUF2510, Protein of unknown function (DUF2510)
GCF_000270365.1_ASM27036v1	NC_017522	Mycobacterium tuberculosis CCDC5180, complete sequence	14	3942168-3943919	8	CRT	no		csa3,cas3,DinG,WYL,cas4,DEDDh,c2c9_V-U4,csm3gr7,csm2gr11,cas10,cas6	Orphan	CANCGGCGGCACCGGCGGCNNCGGCGGNNNCGGCGG	36	2	9	3942759-3942794|3942759-3942794|3942759-3942794|3942759-3942794|3942759-3942794|3943650-3943676|3943650-3943676|3943650-3943676|3943650-3943676	NC_017522.1_3940875-3940910|NC_017522.1_3941217-3941252|NC_017522.1_3941808-3941843|NC_017522.1_3942159-3942194|NC_017522.1_3927212-3927247|NC_017522.1_357856-357882|NC_017522.1_3935061-3935087|NC_017522.1_3935397-3935423|NC_017522.1_3935742-3935768	NA	21	21	Orphan	csa3,cas3,DinG,WYL,cas4,DEDDh,c2c9_V-U4,csm3gr7,csm2gr11,cas10,cas6	NA,NA|280aa|down_2|NC_017522.1_3947234_3948074_+	NA|318aa|up_9|NC_017522.1_3915497_3916451_-	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional	NA|64aa|up_8|NC_017522.1_3916475_3916667_-	COG1141, Fer, Ferredoxin [Energy production and conversion]	NA|401aa|up_7|NC_017522.1_3916881_3918084_+	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|374aa|up_6|NC_017522.1_3918108_3919230_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|503aa|up_5|NC_017522.1_3919300_3920809_+	PRK07867, PRK07867, acyl-CoA synthetase; Validated	NA|516aa|up_4|NC_017522.1_3930680_3932228_-	PRK07586, PRK07586, acetolactate synthase large subunit	NA|279aa|up_3|NC_017522.1_3932224_3933061_-	COG2159, COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]	NA|126aa|up_2|NC_017522.1_3935560_3935938_+	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|636aa|up_1|NC_017522.1_3935971_3937879_+	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|58aa|up_0|NC_017522.1_3937875_3938049_+	PTZ00146, PTZ00146, fibrillarin; Provisional	NA|549aa|down_0|NC_017522.1_3944627_3946274_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|264aa|down_1|NC_017522.1_3946347_3947139_+	PRK07799, PRK07799, crotonase/enoyl-CoA hydratase family protein	NA|280aa|down_2|NC_017522.1_3947234_3948074_+	NA	NA|399aa|down_3|NC_017522.1_3948128_3949325_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|237aa|down_4|NC_017522.1_3949353_3950064_+	pfam06314, ADC, Acetoacetate decarboxylase (ADC)	NA|344aa|down_5|NC_017522.1_3950128_3951160_-	TIGR03559, F420_Rv3520c, probable F420-dependent oxidoreductase, Rv3520c family	NA|335aa|down_6|NC_017522.1_3951231_3952236_+	COG1545, COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only]	NA|355aa|down_7|NC_017522.1_3952251_3953316_+	PRK07937, PRK07937, lipid-transfer protein; Provisional	NA|395aa|down_8|NC_017522.1_3953332_3954517_+	PRK08313, PRK08313, thiolase domain-containing protein	NA|344aa|down_9|NC_017522.1_3954558_3955590_+	cd14952, NHL_PKND_like, NHL repeat domain of the protein kinase PknD
GCF_000270365.1_ASM27036v1	NC_017522	Mycobacterium tuberculosis CCDC5180, complete sequence	15	4104721-4104809	7	CRISPRCasFinder	no		csa3,cas3,DinG,WYL,cas4,DEDDh,c2c9_V-U4,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCTCGGCGACGATGCGGGCCGGATGACGGCC	31	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DinG,WYL,cas4,DEDDh,c2c9_V-U4,csm3gr7,csm2gr11,cas10,cas6	NA|257aa|up_6|NC_017522.1_4095307_4096078_-,NA|233aa|up_0|NC_017522.1_4103825_4104524_-,NA|126aa|down_6|NC_017522.1_4110044_4110422_+	NA|388aa|up_9|NC_017522.1_4090978_4092142_-	TIGR03819, heli_sec_ATPase, helicase/secretion neighborhood ATPase	NA|351aa|up_8|NC_017522.1_4092138_4093191_-	TIGR03815, CpaE_hom_Actino, helicase/secretion neighborhood CpaE-like protein	NA|288aa|up_7|NC_017522.1_4093689_4094553_+	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|257aa|up_6|NC_017522.1_4095307_4096078_-	NA	NA|549aa|up_5|NC_017522.1_4096074_4097721_-	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|288aa|up_4|NC_017522.1_4097717_4098581_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|309aa|up_3|NC_017522.1_4098573_4099500_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|542aa|up_2|NC_017522.1_4099501_4101127_-	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|652aa|up_1|NC_017522.1_4101834_4103790_+	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional	NA|233aa|up_0|NC_017522.1_4103825_4104524_-	NA	NA|173aa|down_0|NC_017522.1_4104869_4105388_+	pfam07332, Phage_holin_3_6, Putative Actinobacterial Holin-X, holin superfamily III	NA|328aa|down_1|NC_017522.1_4105388_4106372_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|398aa|down_2|NC_017522.1_4106364_4107558_-	pfam13365, Trypsin_2, Trypsin-like peptidase domain	NA|274aa|down_3|NC_017522.1_4107563_4108385_-	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes	NA|216aa|down_4|NC_017522.1_4108516_4109164_-	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|246aa|down_5|NC_017522.1_4109199_4109937_-	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]	NA|126aa|down_6|NC_017522.1_4110044_4110422_+	NA	NA|225aa|down_7|NC_017522.1_4110520_4111195_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|265aa|down_8|NC_017522.1_4111300_4112095_-	cd16278, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|152aa|down_9|NC_017522.1_4112101_4112557_-	cd02199, YjgF_YER057c_UK114_like_1, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function
