The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_017927	Streptococcus thermophilus MN-ZLW-002, complete sequence	1848520	597083	610133	1848520		Streptococcus_phage(75.0%)	11	NA	NA
WP_004197422.1|597083_598085_+	catabolite control protein A	NA	C6ZCU4	Enterobacteria_phage	27.3	3.7e-21
WP_014608125.1|598143_598341_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011680938.1|600386_600842_-	YueI family protein	NA	W6LLD2	Streptococcus_phage	98.0	2.2e-77
WP_011680939.1|601050_602355_+	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	99.5	1.4e-246
WP_011680940.1|602506_602692_-	hypothetical protein	NA	W6LMT3	Streptococcus_phage	96.7	3.0e-25
WP_002947233.1|602853_605040_-	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	99.2	0.0e+00
WP_024009810.1|605201_606365_+	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	99.2	1.7e-219
WP_002947238.1|606361_607039_+	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	100.0	1.9e-122
WP_011680943.1|607028_607886_+	shikimate dehydrogenase	NA	NA	NA	NA	NA
WP_011680944.1|607898_608966_+	3-dehydroquinate synthase	NA	NA	NA	NA	NA
WP_011225712.1|608966_610133_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	34.9	1.6e-39
>prophage 2
NC_017927	Streptococcus thermophilus MN-ZLW-002, complete sequence	1848520	710595	719521	1848520		Bacillus_phage(50.0%)	8	NA	NA
WP_002948474.1|710595_711201_+	threonylcarbamoyl-AMP synthase	NA	S4VW33	Pandoravirus	33.7	8.0e-19
WP_014727417.1|711295_712546_+	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	52.1	2.0e-96
WP_014608183.1|712552_713530_+	nucleoid-associated protein	NA	NA	NA	NA	NA
WP_041827329.1|713531_714143_+	lysozyme family protein	NA	A0A223LKM8	Bacillus_phage	41.0	4.6e-22
WP_011681019.1|714175_715915_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.2	2.6e-46
WP_011681020.1|715904_717653_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	30.9	7.1e-52
WP_002885174.1|717830_717962_+	teichoic acid D-Ala incorporation-associated protein DltX	NA	NA	NA	NA	NA
WP_011681022.1|717970_719521_+	D-alanine--poly(phosphoribitol) ligase subunit DltA	NA	A0A2K9KZV5	Tupanvirus	29.3	2.0e-42
>prophage 3
NC_017927	Streptococcus thermophilus MN-ZLW-002, complete sequence	1848520	726696	736299	1848520	integrase	Streptococcus_phage(77.78%)	14	728546:728563	736399:736416
WP_014608193.1|726696_728415_-	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	36.2	2.1e-27
728546:728563	attL	GATTTTAGAGGGAAATAT	NA	NA	NA	NA
WP_014727422.1|728834_728996_-	hypothetical protein	NA	A3F673	Streptococcus_phage	45.0	2.0e-06
WP_014727423.1|729479_729755_-	hypothetical protein	NA	A0A1X9I5U4	Streptococcus_phage	45.2	7.8e-14
WP_014727424.1|729771_729954_-	hypothetical protein	NA	NA	NA	NA	NA
WP_180484893.1|730282_731695_-	virulence-associated protein E	NA	W8CQP1	Croceibacter_phage	34.2	1.2e-46
WP_014727426.1|731691_732549_-	primase C-terminal domain-containing protein	NA	A0A1X9I6L2	Streptococcus_phage	61.5	6.5e-99
WP_011227098.1|732563_732836_-	MerR family transcriptional regulator	NA	A0A1X9I5U9	Streptococcus_phage	50.6	1.4e-18
WP_014727427.1|732837_733149_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014727428.1|733165_733402_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014727429.1|733415_733610_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014727430.1|733613_733919_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014727431.1|734138_734336_-	helix-turn-helix transcriptional regulator	NA	A0A1X9I5U5	Streptococcus_phage	67.7	1.4e-17
WP_002948197.1|734498_735017_+	helix-turn-helix transcriptional regulator	NA	A0A286QPK5	Streptococcus_phage	73.8	2.6e-18
WP_014727432.1|735132_736299_+|integrase	site-specific integrase	integrase	A0A1X9I5Y5	Streptococcus_phage	69.1	5.6e-154
736399:736416	attR	GATTTTAGAGGGAAATAT	NA	NA	NA	NA
>prophage 4
NC_017927	Streptococcus thermophilus MN-ZLW-002, complete sequence	1848520	992470	1001611	1848520	protease	Lactococcus_phage(22.22%)	11	NA	NA
WP_014621469.1|992470_992671_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	90.9	3.4e-27
WP_002944716.1|992950_993151_-	cold shock domain-containing protein	NA	A0A1X9IGI9	Lactococcus_phage	53.1	1.1e-12
WP_002945081.1|994461_995373_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	64.7	7.1e-104
WP_014621467.1|995369_996344_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	73.8	4.0e-137
WP_011225838.1|996340_997231_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	28.9	3.3e-05
WP_014621466.1|997211_997982_-	DUF1003 domain-containing protein	NA	NA	NA	NA	NA
WP_014621465.1|998186_998375_-|protease	serine protease	protease	NA	NA	NA	NA
WP_002946191.1|999194_999686_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	56.7	1.4e-45
WP_014621464.1|999805_1000522_-	7-carboxy-7-deazaguanine synthase QueE	NA	E7DN68	Pneumococcus_phage	47.7	8.2e-63
WP_014727530.1|1000514_1000958_-	6-carboxytetrahydropterin synthase QueD	NA	J9PV91	Bacillus_phage	55.6	7.9e-40
WP_014727531.1|1000957_1001611_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	55.9	1.3e-62
>prophage 5
NC_017927	Streptococcus thermophilus MN-ZLW-002, complete sequence	1848520	1258819	1322183	1848520	transposase,tRNA	Bacillus_phage(12.5%)	46	NA	NA
WP_095559508.1|1258819_1260159_-|transposase	IS3-like element ISSth6 family transposase	transposase	A0A1B1P773	Bacillus_phage	51.5	3.3e-65
WP_011681388.1|1260394_1260553_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014608517.1|1261617_1264797_-	SMC family ATPase	NA	E3SMW4	Prochlorococcus_phage	27.2	8.2e-06
WP_014608518.1|1264793_1266002_-	exonuclease SbcCD subunit D	NA	D9J0R3	Brochothrix_phage	22.3	5.3e-06
WP_011226267.1|1266856_1269937_-	DUF4981 domain-containing protein	NA	L0N6M2	Herpes_simplex_virus	32.5	1.3e-144
WP_014727610.1|1269940_1271845_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_014608520.1|1271947_1272994_-	galactose-1-epimerase	NA	NA	NA	NA	NA
WP_011681394.1|1273063_1274065_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	37.0	8.0e-48
WP_041827434.1|1274094_1275576_-	UDP-glucose--hexose-1-phosphate uridylyltransferase	NA	NA	NA	NA	NA
WP_011226272.1|1275595_1276762_-	galactokinase	NA	NA	NA	NA	NA
WP_011226273.1|1276904_1277900_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_087010049.1|1278379_1278469_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_014608522.1|1278481_1278673_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	50.0	1.3e-07
WP_004197624.1|1278694_1278883_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_002951370.1|1281025_1281307_+	ATP-binding cassette domain-containing protein	NA	M1IC18	Acanthocystis_turfacea_Chlorella_virus	29.1	5.2e-05
WP_014608527.1|1282903_1285168_+	bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB	NA	NA	NA	NA	NA
WP_024009996.1|1286770_1286989_-	hypothetical protein	NA	NA	NA	NA	NA
WP_128887977.1|1287038_1287731_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014727612.1|1288009_1290424_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	50.9	4.7e-86
WP_014608529.1|1290576_1291575_-	NAD(P)/FAD-dependent oxidoreductase	NA	Q9JRK7	Streptococcus_phage	48.4	7.0e-28
WP_011226285.1|1291576_1292296_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_011226286.1|1292285_1292804_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_002951384.1|1293475_1294120_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_011227402.1|1294109_1295120_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_014621793.1|1295116_1295815_-	cell wall-active antibiotics response protein	NA	NA	NA	NA	NA
WP_014727614.1|1296871_1298743_-	Stk1 family PASTA domain-containing Ser/Thr kinase	NA	B5LWE2	Feldmannia_species_virus	29.9	1.4e-21
WP_014727615.1|1298742_1299480_-	Stp1/IreP family PP2C-type Ser/Thr phosphatase	NA	NA	NA	NA	NA
WP_014608533.1|1299523_1300846_-	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA	NA
WP_014608534.1|1300835_1301771_-|tRNA	methionyl-tRNA formyltransferase	tRNA	NA	NA	NA	NA
WP_014608535.1|1301788_1304185_-	primosomal protein N'	NA	NA	NA	NA	NA
WP_041829315.1|1304326_1304641_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_002951416.1|1304662_1305292_-	guanylate kinase	NA	S4VT50	Pandoravirus	44.2	1.9e-10
WP_014727617.1|1305524_1306916_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA	NA
WP_014608539.1|1306929_1307745_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_014727618.1|1307737_1308532_-	HAD family hydrolase	NA	NA	NA	NA	NA
WP_011226300.1|1308716_1309094_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014727619.1|1309098_1309797_+	ABC transporter ATP-binding protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	26.2	8.1e-07
WP_014727620.1|1309808_1310594_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014727621.1|1310643_1311573_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.3	8.5e-20
WP_011226304.1|1311565_1312651_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.4	5.1e-16
WP_002946409.1|1312660_1313587_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_014608541.1|1313586_1315080_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_014621802.1|1315141_1317109_-	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014727622.1|1317464_1318721_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	56.6	7.7e-125
WP_014727623.1|1318758_1320732_-	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_095559415.1|1321036_1322183_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	41.0	2.3e-46
>prophage 6
NC_017927	Streptococcus thermophilus MN-ZLW-002, complete sequence	1848520	1481708	1531735	1848520	bacteriocin,transposase,protease,tRNA	Bacillus_virus(25.0%)	52	NA	NA
WP_002946582.1|1481708_1483151_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	tRNA	NA	NA	NA	NA
WP_014608642.1|1483150_1484617_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	tRNA	NA	NA	NA	NA
WP_002884769.1|1484616_1484919_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
WP_024010053.1|1485058_1485313_-	glycosyl transferase	NA	NA	NA	NA	NA
WP_080998437.1|1485325_1485535_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_041827375.1|1487447_1487957_-	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_014608646.1|1487968_1488817_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002946999.1|1488940_1489492_-	cysteine hydrolase	NA	G3MA16	Bacillus_virus	40.3	2.6e-24
WP_002951720.1|1489554_1490340_-	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA	NA
WP_002951721.1|1490599_1491814_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_002946987.1|1492168_1492621_+	universal stress protein	NA	NA	NA	NA	NA
WP_014621904.1|1493443_1493617_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014621905.1|1493683_1494052_-	membrane protein	NA	NA	NA	NA	NA
WP_002946980.1|1494263_1495064_-	pyruvate formate lyase-activating protein	NA	A0A2P0VNQ0	Tetraselmis_virus	31.8	2.9e-24
WP_157821721.1|1495251_1495380_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_002951727.1|1496059_1497391_-	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_011226459.1|1497502_1498285_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.1	5.9e-14
WP_011681548.1|1498906_1500973_-	sodium:proton antiporter	NA	NA	NA	NA	NA
WP_011226461.1|1500981_1501224_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011226462.1|1501220_1501769_-	SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	44.1	3.5e-37
WP_011226463.1|1501765_1502710_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	48.3	8.6e-36
WP_011681549.1|1502794_1503871_-	PDZ domain-containing protein	NA	NA	NA	NA	NA
WP_011681550.1|1503848_1504346_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	28.8	1.1e-13
WP_011226466.1|1504379_1504928_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_011226467.1|1505069_1505990_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	52.0	4.7e-87
WP_014621911.1|1506055_1506280_-	DUF4059 family protein	NA	NA	NA	NA	NA
WP_014608652.1|1506494_1507238_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.5	1.2e-29
WP_095559509.1|1507237_1507984_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_014727671.1|1508379_1509210_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_002947030.1|1509669_1509903_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014608654.1|1510200_1511304_-	DNA polymerase IV	NA	NA	NA	NA	NA
WP_011226473.1|1511582_1513892_+	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	32.4	8.1e-112
WP_014727672.1|1514158_1514941_+	carbonic anhydrase family protein	NA	NA	NA	NA	NA
WP_014608655.1|1514991_1515444_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_014621914.1|1515794_1516100_-	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_011681558.1|1517077_1517833_-	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA	NA
WP_011681559.1|1517829_1518480_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	31.5	1.1e-21
WP_002951776.1|1518682_1519639_-	serine hydrolase	NA	NA	NA	NA	NA
WP_011681560.1|1519638_1520394_-	CppA family protein	NA	NA	NA	NA	NA
WP_014608659.1|1520675_1521038_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_002951781.1|1521124_1521988_-	aquaporin family protein	NA	M1H4F4	Acanthocystis_turfacea_Chlorella_virus	34.4	3.9e-27
WP_011681561.1|1522108_1524376_+	Xaa-Pro dipeptidyl-peptidase	NA	NA	NA	NA	NA
WP_002951783.1|1524455_1524836_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002945924.1|1524960_1525224_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004197070.1|1525545_1525842_-|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
WP_011681562.1|1526006_1526213_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011681563.1|1526243_1526933_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_087009847.1|1527126_1528696_+|transposase	IS3-like element ISSth1b family transposase	transposase	A0A0C5AC89	Paenibacillus_phage	50.9	2.0e-53
WP_014608660.1|1528842_1529097_-|bacteriocin	Blp family class II bacteriocin	bacteriocin	NA	NA	NA	NA
WP_014608662.1|1530753_1530984_-|bacteriocin	Blp family class II bacteriocin	bacteriocin	NA	NA	NA	NA
WP_011681569.1|1531339_1531540_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011681570.1|1531558_1531735_-|bacteriocin	Blp family class II bacteriocin	bacteriocin	NA	NA	NA	NA
>prophage 7
NC_017927	Streptococcus thermophilus MN-ZLW-002, complete sequence	1848520	1826243	1841815	1848520	tRNA	Streptococcus_phage(30.0%)	15	NA	NA
WP_014608801.1|1826243_1826873_-	hypothetical protein	NA	Q4Z8Z7	Staphylococcus_phage	45.8	3.6e-22
WP_014608802.1|1827112_1827667_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A249XZV3	Enterococcus_phage	48.7	1.1e-25
WP_011226702.1|1827970_1828765_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_002947774.1|1828757_1829600_-	energy-coupling factor transporter ATPase	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	26.2	2.1e-17
WP_002947776.1|1829575_1830406_-	energy-coupling factor transporter ATPase	NA	G9BWD6	Planktothrix_phage	31.3	4.5e-20
WP_002947777.1|1830418_1830961_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_014608803.1|1830973_1831831_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_011226704.1|1831889_1833167_-	insulinase family protein	NA	A0A167R9K4	Powai_lake_megavirus	28.3	4.3e-22
WP_011681762.1|1833168_1834419_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	39.9	3.9e-92
WP_002947785.1|1834496_1834874_+	S4 domain-containing protein YaaA	NA	A0A1X9I5V8	Streptococcus_phage	68.4	1.7e-22
WP_002947786.1|1834876_1835977_+	DNA replication/repair protein RecF	NA	NA	NA	NA	NA
WP_014608806.1|1836145_1837627_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.3	1.2e-95
WP_002952292.1|1837803_1838826_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_011227628.1|1839253_1840126_+	YitT family protein	NA	M1Q1P6	Streptococcus_phage	33.9	3.7e-33
WP_011226709.1|1840192_1841815_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	25.3	5.4e-46
