The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP015613	Serratia plymuthica PRI-2C chromosome, complete genome	5474685	788485	839935	5474685	tRNA,plate,tail	Erwinia_phage(23.33%)	52	NA	NA
WP_006317703.1|788485_789532_+|tRNA	tRNA pseudouridine(13) synthase TruD	tRNA	NA	NA	NA	NA
WP_043912118.1|789782_790544_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	47.2	4.6e-56
WP_006317705.1|790537_791164_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	49.4	9.1e-34
WP_043912121.1|791489_792476_+	murein hydrolase activator NlpD	NA	D7RWE0	Brochothrix_phage	38.6	7.9e-08
WP_004950287.1|792530_793529_+	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	37.6	9.4e-33
WP_006317707.1|793609_796165_-	DNA mismatch repair protein MutS	NA	A0A1V0SJ67	Klosneuvirus	24.2	8.0e-28
WP_006317708.1|797053_797371_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_006317709.1|797382_798744_+	PTS N,N'-diacetylchitobiose transporter subunit IIC	NA	NA	NA	NA	NA
WP_006317710.1|798792_800178_+	glycoside hydrolase family 1 protein	NA	NA	NA	NA	NA
WP_006317711.1|800177_801041_+	transcriptional regulator ChbR	NA	NA	NA	NA	NA
WP_006317712.1|801194_801956_+	chitin disaccharide deacetylase	NA	NA	NA	NA	NA
WP_006317713.1|801990_803376_-	MFS transporter	NA	NA	NA	NA	NA
WP_006317714.1|803625_804114_+	nicotinamide-nucleotide amidase	NA	B5TK85	Pseudomonas_phage	47.7	1.7e-27
WP_004950320.1|804226_805291_+	recombinase RecA	NA	A0A2D1GPX2	Mycobacterium_phage	61.6	6.4e-112
WP_006317715.1|805355_805862_+	recombination regulator RecX	NA	NA	NA	NA	NA
WP_006317716.1|805994_808622_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	37.4	1.1e-80
WP_004950328.1|808874_809060_+	carbon storage regulator CsrA	NA	A0A2I7RT00	Vibrio_phage	66.7	4.9e-12
WP_065505883.1|810135_810702_+	fructose-1-phosphate/6-phosphogluconate phosphatase	NA	NA	NA	NA	NA
WP_065505884.1|810698_811127_+	DedA family protein	NA	NA	NA	NA	NA
WP_065505885.1|811209_812772_+	glutamate--cysteine ligase	NA	NA	NA	NA	NA
WP_065505886.1|812938_813454_+	S-ribosylhomocysteine lyase	NA	NA	NA	NA	NA
WP_065505887.1|813521_814811_-	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_065505888.1|814852_815644_-	inner membrane protein YpjD	NA	NA	NA	NA	NA
WP_062790301.1|815813_817175_+	signal recognition particle protein	NA	NA	NA	NA	NA
WP_004932501.1|817391_817640_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_065505889.1|817658_818207_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_065505890.1|818259_819027_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_004950372.1|819081_819438_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_065505891.1|819603_819822_-	DNA-binding transcriptional regulator	NA	Q37973	Salmonella_virus	67.6	2.8e-22
WP_065505892.1|819911_821066_-	hypothetical protein	NA	Q6K1G4	Salmonella_virus	45.9	8.5e-94
WP_065505893.1|821062_821524_-|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	66.7	9.3e-44
WP_065505894.1|821536_823594_-|tail	phage tail tape measure protein	tail	A0A0M3UL85	Salmonella_phage	27.9	1.7e-23
WP_013811556.1|823586_823721_-|tail	GpE family phage tail protein	tail	Q6K1G8	Salmonella_virus	78.9	8.7e-11
WP_012005306.1|823741_824029_-|tail	phage tail assembly protein	tail	A0A0F7LDQ8	Escherichia_phage	60.2	1.8e-24
WP_006323695.1|824092_824602_-|tail	phage major tail tube protein	tail	A0A218M4J0	Erwinia_phage	69.0	1.3e-65
WP_065505895.1|824615_825785_-|tail	phage tail sheath protein	tail	F1BUU3	Erwinia_phage	79.7	4.4e-183
WP_065505896.1|825926_826481_-|tail	tail fiber assembly protein	tail	A0A222YXY8	Escherichia_phage	35.8	2.0e-24
WP_065505897.1|826482_828147_-|tail	phage tail protein	tail	A0A0M3ULH6	Salmonella_phage	53.0	5.7e-59
WP_065505898.1|828143_831437_-|tail	phage tail protein I	tail	A0A2L0V120	Salmonella_phage	48.4	4.2e-271
WP_065505899.1|831429_832338_-|plate	baseplate assembly protein	plate	A0A1J0I2M3	Salmonella_phage	76.8	1.1e-123
WP_065505900.1|832342_832693_-	GPW/gp25 family protein	NA	F1BUP4	Erwinia_phage	66.4	2.9e-37
WP_065505901.1|832689_833325_-|plate	phage baseplate assembly protein V	plate	A0A0M4S6F6	Salmonella_phage	58.4	5.0e-64
WP_065505902.1|833414_833879_-|tail	phage tail protein	tail	F1BUP9	Erwinia_phage	55.0	3.5e-38
WP_065505903.1|833948_834461_-	lysozyme	NA	A0A218M4K3	Erwinia_phage	64.1	8.2e-57
WP_065505904.1|834444_834663_-	hypothetical protein	NA	B6SD15	Bacteriophage	50.9	2.8e-06
WP_065505905.1|834666_834870_-|tail	tail protein X	tail	F1BUQ5	Erwinia_phage	67.2	6.3e-21
WP_065505906.1|835072_835267_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065505907.1|835755_835977_-	TraR/DksA C4-type zinc finger protein	NA	F1BUS2	Erwinia_phage	50.0	6.5e-11
WP_065505908.1|836052_836358_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065505909.1|836588_837485_+	phage repressor protein CI	NA	Q6K1G0	Salmonella_virus	46.9	1.2e-68
WP_004950379.1|837531_838296_-	DUF481 domain-containing protein	NA	NA	NA	NA	NA
WP_065505910.1|838861_839935_+	3-deoxy-7-phosphoheptulonate synthase	NA	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	50.3	5.8e-89
>prophage 2
NZ_CP015613	Serratia plymuthica PRI-2C chromosome, complete genome	5474685	1164141	1172795	5474685	tRNA,integrase	Moumouvirus(14.29%)	11	1158424:1158437	1175021:1175034
1158424:1158437	attL	TCTGCTGGCTGCGC	NA	NA	NA	NA
WP_006322340.1|1164141_1165527_+|tRNA	cysteine--tRNA ligase	tRNA	M1PG92	Moumouvirus	34.1	2.2e-43
WP_006322341.1|1165589_1165802_-	ribosome-associated protein YbcJ	NA	NA	NA	NA	NA
WP_006322343.1|1165812_1166679_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	34.0	4.5e-31
WP_006322345.1|1166888_1167089_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037432345.1|1167085_1167379_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081304060.1|1167721_1167991_+	phage antirepressor KilAC domain-containing protein	NA	D0UIL6	Aggregatibacter_phage	68.0	4.2e-12
WP_006322348.1|1167994_1168198_+	DUF4222 domain-containing protein	NA	NA	NA	NA	NA
WP_006322349.1|1168194_1169745_+	DUF968 domain-containing protein	NA	A0A291AWV9	Escherichia_phage	39.2	1.7e-57
WP_006322351.1|1169755_1170679_+	hypothetical protein	NA	A0A2D1GNR4	Pseudomonas_phage	34.0	4.2e-35
WP_006322353.1|1171156_1172371_+|integrase	tyrosine-type recombinase/integrase	integrase	Q7M297	Enterobacteria_phage	57.0	5.2e-134
WP_073970545.1|1172570_1172795_-|integrase	tyrosine-type recombinase/integrase	integrase	K7PHM9	Enterobacterial_phage	74.6	1.0e-19
1175021:1175034	attR	TCTGCTGGCTGCGC	NA	NA	NA	NA
>prophage 3
NZ_CP015613	Serratia plymuthica PRI-2C chromosome, complete genome	5474685	1858966	1909909	5474685	plate,protease	uncultured_Caudovirales_phage(28.57%)	41	NA	NA
WP_193395142.1|1858966_1860718_-|protease	Lon protease family protein	protease	NA	NA	NA	NA
WP_006320724.1|1860927_1861386_+	macrodomain Ter protein MatP	NA	NA	NA	NA	NA
WP_006320723.1|1861487_1862564_-	porin OmpA	NA	NA	NA	NA	NA
WP_006320722.1|1862922_1863429_-	cell division inhibitor SulA	NA	NA	NA	NA	NA
WP_006320721.1|1863662_1864322_+	TfoX/Sxy family DNA transformation protein	NA	NA	NA	NA	NA
WP_006320720.1|1864322_1866458_-	TIGR01666 family membrane protein	NA	NA	NA	NA	NA
WP_006320719.1|1866484_1866937_-	YccF domain-containing protein	NA	NA	NA	NA	NA
WP_006320717.1|1867103_1869158_+	DNA helicase IV	NA	A7KV33	Bacillus_phage	26.6	1.7e-15
WP_006320716.1|1869191_1869650_-	methylglyoxal synthase	NA	NA	NA	NA	NA
WP_006320715.1|1869772_1870444_-	DUF2057 family protein	NA	NA	NA	NA	NA
WP_006320714.1|1870703_1871117_+	CoA-binding protein	NA	NA	NA	NA	NA
WP_004942817.1|1871178_1871496_-	heat shock protein HspQ	NA	NA	NA	NA	NA
WP_006320713.1|1871557_1872748_-	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	NA	NA	NA	NA
WP_006320712.1|1872838_1873117_+	acylphosphatase	NA	NA	NA	NA	NA
WP_004942823.1|1873120_1873450_-	sulfurtransferase TusE	NA	NA	NA	NA	NA
WP_004942825.1|1873561_1874221_-|protease	FtsH protease modulator YccA	protease	A0A2H4JFM9	uncultured_Caudovirales_phage	48.4	2.8e-41
WP_006320684.1|1875344_1875842_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_006320681.1|1875876_1877424_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_006320680.1|1877437_1878775_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_006320678.1|1878771_1879425_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_065506126.1|1879428_1881156_+	OmpA family protein	NA	NA	NA	NA	NA
WP_006317216.1|1881159_1881651_+	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_006317215.1|1881680_1882088_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065506127.1|1882276_1884928_+	type VI secretion system ATPase TssH	NA	K4FB40	Cronobacter_phage	32.5	1.1e-96
WP_006317385.1|1884942_1885398_+	hypothetical protein	NA	A0A218M4J4	Erwinia_phage	42.7	2.4e-20
WP_006317383.1|1885394_1885715_+	DUF1493 family protein	NA	NA	NA	NA	NA
WP_065506128.1|1885783_1888330_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	28.7	4.0e-03
WP_006321995.1|1888404_1890240_+	lipase family protein	NA	A0A2R8FER2	Brazilian_cedratvirus	29.7	6.9e-05
WP_148661015.1|1890223_1891003_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006321997.1|1891233_1891836_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006322000.1|1892117_1892384_+	PAAR domain-containing protein	NA	NA	NA	NA	NA
WP_006322001.1|1892387_1893542_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006322002.1|1893528_1896939_+	type VI secretion protein VasK	NA	NA	NA	NA	NA
WP_006322003.1|1896938_1898531_+	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_006322004.1|1898555_1900319_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_006322006.1|1900273_1901374_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_148661057.1|1901354_1901891_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_043911970.1|1903170_1903812_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006316694.1|1906750_1908586_+	lipase family protein	NA	G9E505	Ostreococcus_lucimarinus_virus	30.8	6.0e-09
WP_148661016.1|1908569_1909322_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065506131.1|1909462_1909909_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
>prophage 4
NZ_CP015613	Serratia plymuthica PRI-2C chromosome, complete genome	5474685	2010059	2069834	5474685	transposase,tail,integrase	Escherichia_phage(25.0%)	55	2031338:2031352	2075497:2075511
WP_006322504.1|2010059_2011067_+	DNA polymerase III subunit delta'	NA	A0A1U9WR94	Streptococcus_virus	30.8	9.9e-06
WP_006322503.1|2011081_2011858_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_006322502.1|2012194_2013628_+	PTS glucose transporter subunit IIBC	NA	NA	NA	NA	NA
WP_006322501.1|2013777_2013999_-	ogr/Delta-like zinc finger family protein	NA	Q53ZE7	Salmonella_virus	59.7	8.5e-19
WP_006322500.1|2014072_2015164_-	phage late control D family protein	NA	E5G6Q3	Salmonella_phage	55.2	2.2e-112
WP_148661059.1|2015374_2015575_-|tail	GpE family phage tail protein	tail	A0A0F7LCR6	Escherichia_phage	53.3	6.1e-08
WP_006322491.1|2015553_2015907_-|tail	phage tail assembly protein	tail	E5G6P9	Salmonella_phage	54.4	1.2e-19
WP_006322489.1|2015982_2016498_-|tail	phage major tail tube protein	tail	Q37845	Escherichia_phage	65.7	3.3e-58
WP_006322488.1|2016508_2017681_-|tail	phage tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	81.4	2.6e-183
WP_148661060.1|2018298_2018922_-	hypothetical protein	NA	A0A0F7LBP9	Escherichia_phage	70.0	1.7e-80
WP_081304009.1|2018996_2020217_-	RNA-directed DNA polymerase	NA	A0A0F7LDS3	Escherichia_phage	76.6	4.2e-176
WP_006322480.1|2022102_2023017_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043913312.1|2023261_2024068_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006322476.1|2024645_2025641_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006322474.1|2025776_2026121_-	hypothetical protein	NA	A0A193GYX4	Enterobacter_phage	42.1	6.1e-16
WP_006322471.1|2027520_2028471_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006322470.1|2028720_2029191_-	manganese-binding transcriptional regulator MntR	NA	NA	NA	NA	NA
WP_006322469.1|2029420_2030725_+	Nramp family divalent metal transporter	NA	NA	NA	NA	NA
WP_006322468.1|2030871_2031444_-	SH3 domain-containing protein	NA	NA	NA	NA	NA
2031338:2031352	attL	ATCGGCGTATTTTTT	NA	NA	NA	NA
WP_006322467.1|2031614_2032361_-	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	31.2	2.1e-16
WP_081304012.1|2032460_2032838_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_006322465.1|2032834_2033740_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_006322464.1|2033982_2034333_+	purine nucleoside phosphoramidase	NA	NA	NA	NA	NA
WP_006322463.1|2034345_2034735_+	YcfL family protein	NA	NA	NA	NA	NA
WP_006322462.1|2034761_2035355_+	penicillin-binding protein activator LpoB	NA	NA	NA	NA	NA
WP_006322461.1|2035335_2036205_+	thiamine kinase	NA	NA	NA	NA	NA
WP_043913309.1|2036236_2037256_+	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
WP_006322459.1|2037331_2037874_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_006322458.1|2038206_2039511_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_006322457.1|2039872_2040409_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_006322456.1|2040698_2041184_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_006322455.1|2041263_2044407_-	multidrug efflux RND transporter permease subunit SdeB	NA	NA	NA	NA	NA
WP_006322454.1|2044431_2045634_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_006322453.1|2045928_2046279_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_071919892.1|2046319_2047468_-	HNH endonuclease	NA	NA	NA	NA	NA
WP_006322450.1|2047468_2048167_-	OmpA family protein	NA	NA	NA	NA	NA
WP_006322449.1|2048166_2049933_-	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_065506132.1|2051719_2053186_+	MFS transporter	NA	NA	NA	NA	NA
WP_148661018.1|2053250_2054614_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	51.9	9.4e-76
WP_006317286.1|2054765_2055707_+	glyoxylate/hydroxypyruvate reductase GhrA	NA	NA	NA	NA	NA
WP_006317285.1|2055788_2056526_+	phosphatase	NA	NA	NA	NA	NA
WP_006317276.1|2056567_2057146_+	molecular chaperone	NA	NA	NA	NA	NA
WP_006317273.1|2057314_2057968_+	DUF533 domain-containing protein	NA	NA	NA	NA	NA
WP_006317272.1|2058036_2060070_+	prolyl oligopeptidase family serine peptidase	NA	A0A1V0SHT0	Klosneuvirus	27.5	1.7e-36
WP_006317271.1|2060103_2060772_-	exodeoxyribonuclease X	NA	A0A1W5PTR6	Pseudoalteromonas_phage	30.9	9.8e-18
WP_006317270.1|2060798_2061545_-	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA	NA
WP_006317268.1|2061921_2062347_+	RNA polymerase-binding protein DksA	NA	NA	NA	NA	NA
WP_004943115.1|2062506_2063460_+	prolyl aminopeptidase	NA	NA	NA	NA	NA
WP_004943118.1|2063489_2063720_-	DNA polymerase III subunit theta	NA	H9C187	Pectobacterium_phage	63.2	1.8e-16
WP_065506133.1|2064092_2064611_+	non-heme ferritin	NA	NA	NA	NA	NA
WP_065506134.1|2064917_2065301_+	CopC domain-containing protein YobA	NA	NA	NA	NA	NA
WP_065506135.1|2065303_2066185_+	copper homeostasis membrane protein CopD	NA	NA	NA	NA	NA
WP_004943126.1|2066254_2066596_+	YebY family protein	NA	NA	NA	NA	NA
WP_065506137.1|2068681_2069137_+	hypothetical protein	NA	NA	NA	NA	NA
WP_065506138.1|2069339_2069834_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	50.6	6.3e-38
2075497:2075511	attR	ATCGGCGTATTTTTT	NA	NA	NA	NA
