assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000259255.1_ASM25925v1	NC_017737	Helicobacter cetorum MIT 00-7128, complete genome	1	494325-494427	1	CRISPRCasFinder	no		DEDDh,cas2,cas3,csx20,cas6,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx1,cas1	Orphan	GGTATTATCAATCCTAAAGACATTA	25	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas2,cas3,csx20,cas6,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx1,cas1	NA,NA|89aa|down_0|NC_017737.1_495448_495715_+,NA|151aa|down_1|NC_017737.1_495961_496414_-	NA|132aa|up_9|NC_017737.1_478779_479175_+	TIGR00150, Hypothetical_UPF0079_protein_yjeE	NA|241aa|up_8|NC_017737.1_479179_479902_+	COG1137, YhbG, ABC-type (unclassified) transport system, ATPase component [General function prediction only]	NA|421aa|up_7|NC_017737.1_479904_481167_+	PRK05932, PRK05932, RNA polymerase factor sigma-54; Reviewed	NA|416aa|up_6|NC_017737.1_481240_482488_-	pfam13023, HD_3, HD domain	NA|310aa|up_5|NC_017737.1_483291_484221_+	TIGR00128, Malonyl_CoA-acyl_carrier_protein_transacylase, malonyl CoA-acyl carrier protein transacylase	NA|231aa|up_4|NC_017737.1_484235_484928_+	PRK05584, PRK05584, 5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA|651aa|up_3|NC_017737.1_485049_487002_+	PRK05658, PRK05658, RNA polymerase sigma factor RpoD; Validated	NA|464aa|up_2|NC_017737.1_487007_488399_+	pfam00877, NLPC_P60, NlpC/P60 family	NA|456aa|up_1|NC_017737.1_488459_489827_+	PTZ00383, PTZ00383, malate:quinone oxidoreductase; Provisional	NA|62aa|up_0|NC_017737.1_489826_490012_+	pfam17402, DUF5408, Family of unknown function (DUF5408)	NA|89aa|down_0|NC_017737.1_495448_495715_+	NA	NA|151aa|down_1|NC_017737.1_495961_496414_-	NA	NA|199aa|down_2|NC_017737.1_496436_497033_-	cd03394, PAP2_like_5, PAP2_like_5 proteins	NA|340aa|down_3|NC_017737.1_497019_498039_-	COG0472, Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase [Cell envelope biogenesis, outer membrane]	NA|263aa|down_4|NC_017737.1_498177_498966_+	TIGR00559, Pyridoxine_5'-phosphate_synthase, pyridoxine 5'-phosphate synthase	NA|310aa|down_5|NC_017737.1_498968_499898_+	PRK03946, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Provisional	NA|497aa|down_6|NC_017737.1_499938_501429_-	TIGR02121, Osmoregulated_proline_transporter, sodium/proline symporter	NA|1184aa|down_7|NC_017737.1_501460_505012_-	cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA	NA|457aa|down_8|NC_017737.1_505228_506599_-	pfam13447, Multi-haem_cyto, Seven times multi-haem cytochrome CxxCH	NA|205aa|down_9|NC_017737.1_506604_507219_-	pfam03264, Cytochrom_NNT, NapC/NirT cytochrome c family, N-terminal region
GCF_000259255.1_ASM25925v1	NC_017737	Helicobacter cetorum MIT 00-7128, complete genome	2	1290126-1290230	2	CRISPRCasFinder	no		DEDDh,cas2,cas3,csx20,cas6,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx1,cas1	Orphan	ATTACGATTTTAGGATTTTTAGATT	25	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas2,cas3,csx20,cas6,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx1,cas1	NA|55aa|up_2|NC_017737.1_1287363_1287528_+,NA|116aa|down_0|NC_017737.1_1291017_1291365_-	NA|195aa|up_9|NC_017737.1_1281355_1281940_-	PRK00393, ribA, GTP cyclohydrolase II RibA	NA|260aa|up_8|NC_017737.1_1282072_1282852_-	pfam13084, DUF3943, Domain of unknown function (DUF3943)	NA|345aa|up_7|NC_017737.1_1282943_1283978_-	PRK09314, PRK09314, bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II	NA|245aa|up_6|NC_017737.1_1284125_1284860_+	cd13539, PBP2_AvModA, Substrate binding domain of ModA/WtpA from Azotobacter vinelandii and its closest homologs;the type 2 periplasmic binding protein fold	NA|225aa|up_5|NC_017737.1_1284888_1285563_+	COG4149, ModC, ABC-type molybdate transport system, permease component [Inorganic ion transport and metabolism]	NA|261aa|up_4|NC_017737.1_1285559_1286342_+	COG1118, CysA, ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]	NA|283aa|up_3|NC_017737.1_1286346_1287195_-	COG3306, COG3306, Glycosyltransferase involved in LPS biosynthesis [Cell envelope biogenesis, outer membrane]	NA|55aa|up_2|NC_017737.1_1287363_1287528_+	NA	NA|494aa|up_1|NC_017737.1_1287538_1289020_+	COG1495, DsbB, Disulfide bond formation protein DsbB [Posttranslational modification, protein turnover, chaperones]	NA|195aa|up_0|NC_017737.1_1289499_1290084_+	PRK12303, PRK12303, tumor necrosis factor alpha-inducing protein; Reviewed	NA|116aa|down_0|NC_017737.1_1291017_1291365_-	NA	NA|543aa|down_1|NC_017737.1_1291765_1293394_-	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|498aa|down_2|NC_017737.1_1293411_1294905_-	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|502aa|down_3|NC_017737.1_1295389_1296895_+	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|487aa|down_4|NC_017737.1_1296912_1298373_+	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|227aa|down_5|NC_017737.1_1300089_1300770_-	cd10911, PIN_LabA, PIN domain of Synechococcus elongatus LabA (low-amplitude and bright) and related proteins	NA|188aa|down_6|NC_017737.1_1300840_1301404_-	PRK00529, PRK00529, elongation factor P; Validated	NA|308aa|down_7|NC_017737.1_1301422_1302346_-	PRK05835, PRK05835, class II fructose-1,6-bisphosphate aldolase	NA|295aa|down_8|NC_017737.1_1302361_1303246_-	PRK00059, prsA, peptidylprolyl isomerase; Provisional	NA|242aa|down_9|NC_017737.1_1303428_1304154_+	pfam07264, EI24, Etoposide-induced protein 2
GCF_000259255.1_ASM25925v1	NC_017737	Helicobacter cetorum MIT 00-7128, complete genome	3	1563836-1566442	1,3,1	PILER-CR,CRISPRCasFinder,CRT	no	csx20,cas6,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx1,cas2,cas1	DEDDh,cas2,cas3,csx20,cas6,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx1,cas1	Type III-C,Type III-A,Type III-B,Type III-D	GTTTCAATCCCCTTGAACGGGTCAATCTGTAATAAAT,GTTTCAATCCCCTTGAACGGGTCAATCTGTAATAAAT,GTTTCAATCCCCTTGAACGGGTCAATCTGTAATAAAT	37,37,37	6	6	1564344-1564381|1564496-1564536|1565576-1565615|1566049-1566087|1566283-1566327|1566365-1566405	NC_017737.1_652119-652082|NC_017737.1_1252492-1252532|NC_017737.1_1887484-1887523|NC_017737.1_1303636-1303598|NC_017737.1_1536632-1536676|NC_017738.1_5502-5542	NA:NA:NA	33,33,33	33	TypeIII-C,TypeIII-A,TypeIII-B,TypeIII-D	DEDDh,cas2,cas3,csx20,cas6,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx1,cas1	NA|71aa|up_5|NC_017737.1_1560546_1560759_-,NA|150aa|up_4|NC_017737.1_1561087_1561537_-,NA|145aa|up_3|NC_017737.1_1561546_1561981_-,NA|92aa|up_2|NC_017737.1_1562334_1562610_-,NA|123aa|up_1|NC_017737.1_1562625_1562994_-,NA|99aa|up_0|NC_017737.1_1563230_1563527_-,NA|282aa|down_8|NC_017737.1_1574124_1574970_-	csm3gr7|347aa|up_9|NC_017737.1_1555706_1556747_+	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm4gr5|302aa|up_8|NC_017737.1_1556748_1557654_+	TIGR01903, Hypothetical_protein	csm5gr7|402aa|up_7|NC_017737.1_1557638_1558844_+	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5	csx1|501aa|up_6|NC_017737.1_1558856_1560359_+	pfam09455, Cas_DxTHG, CRISPR-associated (Cas) DxTHG family	NA|71aa|up_5|NC_017737.1_1560546_1560759_-	NA	NA|150aa|up_4|NC_017737.1_1561087_1561537_-	NA	NA|145aa|up_3|NC_017737.1_1561546_1561981_-	NA	NA|92aa|up_2|NC_017737.1_1562334_1562610_-	NA	NA|123aa|up_1|NC_017737.1_1562625_1562994_-	NA	NA|99aa|up_0|NC_017737.1_1563230_1563527_-	NA	cas2|92aa|down_0|NC_017737.1_1566885_1567161_-	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2	cas1|319aa|down_1|NC_017737.1_1567161_1568118_-	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	NA|196aa|down_2|NC_017737.1_1568206_1568794_-	cd00564, TMP_TenI, Thiamine monophosphate synthase (TMP synthase)/TenI	NA|227aa|down_3|NC_017737.1_1568804_1569485_-	COG0356, AtpB, F0F1-type ATP synthase, subunit a [Energy production and conversion]	NA|482aa|down_4|NC_017737.1_1569613_1571059_-	PRK05567, PRK05567, inosine 5'-monophosphate dehydrogenase; Reviewed	NA|454aa|down_5|NC_017737.1_1571072_1572434_-	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA|198aa|down_6|NC_017737.1_1572505_1573099_-	PRK00081, coaE, dephospho-CoA kinase; Reviewed	NA|263aa|down_7|NC_017737.1_1573117_1573906_-	PRK00536, speE, spermidine synthase; Provisional	NA|282aa|down_8|NC_017737.1_1574124_1574970_-	NA	NA|474aa|down_9|NC_017737.1_1575045_1576467_+	PRK00093, PRK00093, GTP-binding protein Der; Reviewed
