The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_017730	Corynebacterium pseudotuberculosis 31, complete sequence	2404921	134867	158061	2404921	capsid,head,portal,protease,integrase	Corynebacterium_phage(96.43%)	31	131050:131062	138987:138999
131050:131062	attL	ACGGAATTGTTCT	NA	NA	NA	NA
WP_048653254.1|134867_135899_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	24.5	2.3e-18
WP_048653255.1|136428_137043_+	DUF433 domain-containing protein	NA	A0A1W6JRB2	Corynebacterium_phage	100.0	5.1e-114
WP_048653257.1|137495_138722_-|integrase	site-specific integrase	integrase	A0A1W6JRD7	Corynebacterium_phage	100.0	5.1e-238
WP_048653258.1|138890_139730_-	DUF3037 domain-containing protein	NA	A0A1W6JRH2	Corynebacterium_phage	100.0	1.5e-153
138987:138999	attR	ACGGAATTGTTCT	NA	NA	NA	NA
WP_048653259.1|140647_140872_-	hypothetical protein	NA	A0A1W6JRB8	Corynebacterium_phage	100.0	2.3e-40
WP_155760557.1|140874_141021_-	hypothetical protein	NA	A0A1W6JRC4	Corynebacterium_phage	100.0	4.3e-19
WP_048653260.1|141302_141710_-	hypothetical protein	NA	A0A1W6JRC2	Corynebacterium_phage	100.0	4.5e-74
WP_048653261.1|141719_142211_-	hypothetical protein	NA	A0A1W6JRB0	Corynebacterium_phage	100.0	2.6e-84
WP_048653262.1|142328_142565_+	helix-turn-helix domain-containing protein	NA	A0A1W6JRC7	Corynebacterium_phage	100.0	3.1e-35
WP_048653263.1|142763_143033_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048653264.1|143323_143797_+	hypothetical protein	NA	A0A1W6JRE9	Corynebacterium_phage	100.0	9.5e-84
WP_048653265.1|143823_144645_+	antirepressor	NA	A0A1W6JRI1	Corynebacterium_phage	100.0	9.8e-153
WP_048653266.1|144665_144863_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_048653267.1|144859_145093_+	hypothetical protein	NA	A0A1W6JRC8	Corynebacterium_phage	100.0	2.7e-39
WP_048653268.1|145116_145341_+	hypothetical protein	NA	A0A1W6JRD0	Corynebacterium_phage	100.0	6.1e-33
WP_048653269.1|145324_145642_+	hypothetical protein	NA	NA	NA	NA	NA
WP_048653270.1|145768_146515_+	hypothetical protein	NA	A0A1W6JRD1	Corynebacterium_phage	100.0	1.9e-134
WP_048653271.1|146672_147719_+	HNH endonuclease	NA	A0A1W6JRD2	Corynebacterium_phage	100.0	7.0e-196
WP_048653272.1|147949_148567_+	hypothetical protein	NA	A0A1W6JRC6	Corynebacterium_phage	100.0	2.6e-113
WP_003850222.1|148618_148936_+	hypothetical protein	NA	A0A1W6JRD4	Corynebacterium_phage	100.0	1.4e-51
WP_148660556.1|149052_149445_+	hypothetical protein	NA	A0A1W6JRH9	Corynebacterium_phage	100.0	1.6e-65
WP_048653273.1|151050_152292_+|portal	phage portal protein	portal	A0A1W6JRE1	Corynebacterium_phage	100.0	2.7e-239
WP_048653274.1|152288_153335_+|head,protease	HK97 family phage prohead protease	head,protease	A0A1W6JRD9	Corynebacterium_phage	100.0	4.7e-200
WP_048653275.1|153331_154582_+|capsid	phage major capsid protein	capsid	A0A1W6JRF1	Corynebacterium_phage	100.0	6.8e-230
WP_048653276.1|154774_155257_+	hypothetical protein	NA	A0A1W6JRD8	Corynebacterium_phage	100.0	1.7e-88
WP_048653277.1|155253_155616_+	hypothetical protein	NA	A0A1W6JRD5	Corynebacterium_phage	100.0	2.2e-64
WP_048653278.1|155608_155875_+	hypothetical protein	NA	A0A1W6JRE6	Corynebacterium_phage	100.0	2.5e-41
WP_048653279.1|155864_156242_+	hypothetical protein	NA	A0A1W6JRI9	Corynebacterium_phage	100.0	1.9e-66
WP_048653280.1|156270_157218_+	hypothetical protein	NA	A0A1W6JRH0	Corynebacterium_phage	100.0	1.8e-179
WP_048653281.1|157312_157690_+	hypothetical protein	NA	A0A1W6JRK1	Corynebacterium_phage	100.0	3.6e-62
WP_048653282.1|157851_158061_+	hypothetical protein	NA	A0A1W6JRF2	Corynebacterium_phage	100.0	4.7e-35
>prophage 2
NC_017730	Corynebacterium pseudotuberculosis 31, complete sequence	2404921	163744	172764	2404921	holin	Corynebacterium_phage(100.0%)	10	NA	NA
WP_048653283.1|163744_164536_+	hypothetical protein	NA	A0A1W6JRF0	Corynebacterium_phage	100.0	3.6e-152
WP_048653284.1|164498_165359_+	hypothetical protein	NA	A0A1W6JRE8	Corynebacterium_phage	100.0	1.4e-149
WP_048653285.1|165359_166439_+	hypothetical protein	NA	A0A1W6JRE7	Corynebacterium_phage	100.0	5.2e-162
WP_053071070.1|166438_167815_+	hypothetical protein	NA	A0A1W6JRF8	Corynebacterium_phage	100.0	5.6e-193
WP_148660557.1|168263_168851_+	hypothetical protein	NA	A0A1W6JRH8	Corynebacterium_phage	100.0	8.3e-114
WP_048653287.1|168958_169696_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A1W6JRK9	Corynebacterium_phage	100.0	1.9e-147
WP_081277226.1|169695_169935_+|holin	holin	holin	A0A1W6JRG0	Corynebacterium_phage	100.0	4.5e-34
WP_048653289.1|169937_170402_+	hypothetical protein	NA	A0A1W6JRF4	Corynebacterium_phage	100.0	1.6e-80
WP_048653290.1|170398_170737_+	hypothetical protein	NA	A0A1W6JRH1	Corynebacterium_phage	100.0	2.5e-54
WP_014654963.1|171081_172764_+	diphtheria toxin	NA	A0A1W6JRG3	Corynebacterium_phage	100.0	0.0e+00
>prophage 3
NC_017730	Corynebacterium pseudotuberculosis 31, complete sequence	2404921	1794583	1872289	2404921	protease,integrase,bacteriocin	Agrobacterium_phage(15.38%)	58	1841453:1841480	1847365:1847392
WP_048653450.1|1794583_1795870_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	58.1	6.7e-132
WP_014655697.1|1796030_1798835_-	aminodeoxychorismate synthase component I	NA	A0A0B5J984	Pandoravirus	34.5	2.8e-82
WP_013242459.1|1798911_1799541_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	43.5	1.4e-37
WP_013242460.1|1799556_1800156_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	48.3	1.3e-42
WP_014367463.1|1800366_1801719_-	trigger factor	NA	NA	NA	NA	NA
WP_014300878.1|1802507_1802750_+	hypothetical protein	NA	A0A1W6JRB8	Corynebacterium_phage	48.4	3.9e-09
WP_014523535.1|1802886_1803663_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014367466.1|1803749_1804760_-	pirin family protein	NA	NA	NA	NA	NA
WP_013242465.1|1804877_1805351_-	ribose-5-phosphate isomerase	NA	NA	NA	NA	NA
WP_014367467.1|1805417_1806038_-	DSBA oxidoreductase	NA	NA	NA	NA	NA
WP_014655699.1|1806371_1808987_+	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	29.7	5.9e-42
WP_071417248.1|1809408_1809987_+	mechanosensitive ion channel	NA	NA	NA	NA	NA
WP_014367472.1|1810105_1810498_+	globin	NA	NA	NA	NA	NA
WP_014655700.1|1810509_1811406_+	DMT family transporter	NA	NA	NA	NA	NA
WP_014655701.1|1811409_1812018_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013242474.1|1812023_1812452_-	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_014522869.1|1812659_1814330_-	energy-dependent translational throttle protein EttA	NA	A0A2K9L0W2	Tupanvirus	27.9	1.3e-47
WP_014523540.1|1815606_1817361_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014367477.1|1817357_1818896_+	YcaO-like family protein	NA	NA	NA	NA	NA
WP_014655705.1|1818922_1820401_+	nitroreductase	NA	NA	NA	NA	NA
WP_014655706.1|1820397_1823001_+	lantibiotic dehydratase	NA	NA	NA	NA	NA
WP_014367480.1|1823000_1824014_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014367481.1|1824010_1824991_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014300888.1|1825029_1825206_+|bacteriocin	thiazolylpeptide-type bacteriocin	bacteriocin	NA	NA	NA	NA
WP_014655708.1|1825279_1826731_+	YcaO-like family protein	NA	NA	NA	NA	NA
WP_014367484.1|1826752_1827511_-	permease	NA	NA	NA	NA	NA
WP_014367485.1|1827507_1828431_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	26.1	4.2e-19
WP_048653452.1|1828521_1830567_-	bifunctional copper resistance protein CopD/cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_014655710.1|1831159_1833445_+	carbon starvation protein A	NA	NA	NA	NA	NA
WP_014401336.1|1833464_1833665_+	YbdD/YjiX family protein	NA	NA	NA	NA	NA
WP_014655711.1|1834005_1835832_-	S8 family peptidase	NA	A0A1B0T6A2	Bacillus_phage	31.8	5.2e-29
WP_048653453.1|1836107_1837103_+	oxidoreductase	NA	NA	NA	NA	NA
WP_048653454.1|1837229_1838033_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_014523548.1|1838098_1838758_+	oligoribonuclease	NA	M4M9I5	Vibrio_phage	35.0	8.4e-22
WP_014655714.1|1838937_1839765_+	dihydrodipicolinate synthase family protein	NA	NA	NA	NA	NA
WP_014523549.1|1839818_1841009_-	L,D-transpeptidase	NA	NA	NA	NA	NA
1841453:1841480	attL	TTCGGGGTTCAAGTCCCTGATGGCGCAC	NA	NA	NA	NA
WP_052661840.1|1841627_1842761_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A249XT84	Mycobacterium_phage	30.6	2.4e-32
WP_148660561.1|1843212_1844151_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_161588356.1|1844213_1844651_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014733042.1|1846103_1846661_+	recombinase family protein	NA	M9Q1K0	Clostridium_phage	46.7	3.1e-33
WP_014367502.1|1847704_1848703_+	NADP-dependent oxidoreductase	NA	NA	NA	NA	NA
1847365:1847392	attR	TTCGGGGTTCAAGTCCCTGATGGCGCAC	NA	NA	NA	NA
WP_014655718.1|1848902_1849457_+	isochorismatase family protein	NA	A0A2K9L2K0	Tupanvirus	32.6	5.2e-17
WP_014800825.1|1849465_1849810_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_014655719.1|1849931_1850207_-	DUF3618 domain-containing protein	NA	NA	NA	NA	NA
WP_013242499.1|1850295_1850775_+	thioredoxin-dependent thiol peroxidase	NA	NA	NA	NA	NA
WP_013242500.1|1850812_1851466_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_048653457.1|1851478_1851868_-	holo-ACP synthase	NA	NA	NA	NA	NA
WP_014655721.1|1851998_1861097_-	type I polyketide synthase	NA	NA	NA	NA	NA
WP_014523551.1|1861321_1861627_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014655722.1|1861787_1862903_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_014524035.1|1864780_1865539_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014367512.1|1867308_1867755_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013242510.1|1867842_1868202_+	DUF3817 domain-containing protein	NA	NA	NA	NA	NA
WP_014367514.1|1868270_1868894_-	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA	NA
WP_032802570.1|1868890_1869625_-	ribonuclease PH	NA	NA	NA	NA	NA
WP_014523555.1|1869663_1870431_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_048653459.1|1870503_1871397_-	glutamate racemase	NA	NA	NA	NA	NA
WP_048653460.1|1871470_1872289_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
>prophage 4
NC_017730	Corynebacterium pseudotuberculosis 31, complete sequence	2404921	2020987	2029448	2404921	holin	Pandoravirus(33.33%)	11	NA	NA
WP_048653473.1|2020987_2022736_+|holin	choline dehydrogenase	holin	A0A1V0SI18	Klosneuvirus	31.7	1.5e-62
WP_014367622.1|2022713_2023382_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014655796.1|2023389_2023776_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014367624.1|2023772_2024288_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013242641.1|2024298_2024745_-	DUF3180 domain-containing protein	NA	NA	NA	NA	NA
WP_014655798.1|2024741_2025197_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	S4W084	Pandoravirus	33.8	1.1e-09
WP_014655799.1|2025198_2025540_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_014523608.1|2025526_2026309_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.2	6.5e-21
WP_014367628.1|2026310_2026874_-	GTP cyclohydrolase I FolE	NA	A0A1W7AF02	Streptococcus_virus	57.8	2.6e-48
WP_014523609.1|2026866_2028870_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	E5EQU5	Bathycoccus_sp._RCC1105_virus	50.3	7.8e-111
WP_014300955.1|2028866_2029448_-	hypoxanthine phosphoribosyltransferase	NA	A0A218MMB5	uncultured_virus	31.4	3.0e-15
