assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000258365.1_ASM25836v1	NC_017623	Salmonella enterica subsp. enterica serovar Heidelberg str. B182, complete sequence	1	3549683-3549792	1	CRISPRCasFinder	no		DEDDh,WYL,DinG,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	Orphan	TTAAAAAAAGGTGGTACAGGGTGGGACA	28	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,DinG,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	NA|198aa|up_4|NC_017623.1_3543555_3544149_+,NA|276aa|up_2|NC_017623.1_3546066_3546894_-,NA	NA|161aa|up_9|NC_017623.1_3524269_3524752_+	PRK05422, smpB, SsrA-binding protein SmpB	NA|3825aa|up_8|NC_017623.1_3525366_3536841_+	pfam17936, Big_6, Bacterial Ig domain	NA|470aa|up_7|NC_017623.1_3536905_3538315_+	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family	NA|727aa|up_6|NC_017623.1_3538311_3540492_+	TIGR03375, type_I_sec_LssB, type I secretion system ATPase, LssB family	NA|388aa|up_5|NC_017623.1_3540499_3541663_+	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family	NA|198aa|up_4|NC_017623.1_3543555_3544149_+	NA	NA|398aa|up_3|NC_017623.1_3544538_3545732_+	pfam02810, SEC-C, SEC-C motif	NA|276aa|up_2|NC_017623.1_3546066_3546894_-	NA	NA|72aa|up_1|NC_017623.1_3547344_3547560_+	COG3311, AlpA, Predicted transcriptional regulator [Transcription]	NA|690aa|up_0|NC_017623.1_3547595_3549665_+	COG5519, COG5519, Superfamily II helicase and inactivated derivatives [DNA replication, recombination, and repair]	NA|428aa|down_0|NC_017623.1_3550167_3551451_+	COG3950, COG3950, Predicted ATP-binding protein involved in virulence [General function prediction only]	NA|268aa|down_1|NC_017623.1_3551513_3552317_+	pfam14491, DUF4435, Protein of unknown function (DUF4435)	NA|119aa|down_2|NC_017623.1_3552469_3552826_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|95aa|down_3|NC_017623.1_3552920_3553205_+	COG3423, Nlp, Predicted transcriptional regulator [Transcription]	NA|174aa|down_4|NC_017623.1_3553317_3553839_+	COG3730, SrlA, Phosphotransferase system sorbitol-specific component IIC [Carbohydrate transport and metabolism]	NA|125aa|down_5|NC_017623.1_3553835_3554210_+	COG3731, SrlB, Phosphotransferase system sorbitol-specific component IIA [Carbohydrate transport and metabolism]	NA|327aa|down_6|NC_017623.1_3554206_3555187_+	COG3732, SrlE, Phosphotransferase system sorbitol-specific component IIBC [Carbohydrate transport and metabolism]	NA|338aa|down_7|NC_017623.1_3555197_3556211_+	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|384aa|down_8|NC_017623.1_3556556_3557708_+	pfam13020, DUF3883, Domain of unknown function (DUF3883)	NA|212aa|down_9|NC_017623.1_3557781_3558417_-	TIGR03128, RuMP_HxlA, 3-hexulose-6-phosphate synthase
GCF_000258365.1_ASM25836v1	NC_017623	Salmonella enterica subsp. enterica serovar Heidelberg str. B182, complete sequence	2	3740801-3742463	2,1,1,2,3	CRISPRCasFinder,CRT,PILER-CR,CRT,CRISPRCasFinder	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	DEDDh,WYL,DinG,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29,29,29	0	0	NA	NA	I-E:I-E:I-E:I-E:I-E	25,26,26,26,25	26	TypeI-E	DEDDh,WYL,DinG,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	NA,NA	NA|254aa|up_9|NC_017623.1_3732667_3733429_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_8|NC_017623.1_3733409_3734459_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_7|NC_017623.1_3734455_3734935_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_6|NC_017623.1_3734934_3735645_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_5|NC_017623.1_3735663_3735975_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|108aa|up_4|NC_017623.1_3736165_3736489_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_3|NC_017623.1_3736539_3737145_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|480aa|up_2|NC_017623.1_3737131_3738571_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_1|NC_017623.1_3738580_3739489_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|349aa|up_0|NC_017623.1_3739739_3740786_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	cas2|98aa|down_0|NC_017623.1_3742559_3742853_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|307aa|down_1|NC_017623.1_3742852_3743773_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|217aa|down_2|NC_017623.1_3743769_3744420_-	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas5|249aa|down_3|NC_017623.1_3744401_3745148_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|353aa|down_4|NC_017623.1_3745158_3746217_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|187aa|down_5|NC_017623.1_3746230_3746791_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|519aa|down_6|NC_017623.1_3746787_3748344_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|888aa|down_7|NC_017623.1_3748355_3751019_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|318aa|down_8|NC_017623.1_3751462_3752416_+	PRK15379, PRK15379, type III secretion system effector SopD	NA|245aa|down_9|NC_017623.1_3752628_3753363_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase
GCF_000258365.1_ASM25836v1	NC_017623	Salmonella enterica subsp. enterica serovar Heidelberg str. B182, complete sequence	3	3758721-3759848	4,3,2,3	CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	DEDDh,WYL,DinG,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CTGGAACGGTTTATCCCCGCTGGCGCGGGGAACACT	29,29,29,36	0	0	NA	NA	I-E:I-E:I-E:I-E	18,18,15,15	18	TypeI-E	DEDDh,WYL,DinG,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	NA,NA	cas7|353aa|up_9|NC_017623.1_3745158_3746217_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|187aa|up_8|NC_017623.1_3746230_3746791_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|519aa|up_7|NC_017623.1_3746787_3748344_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|888aa|up_6|NC_017623.1_3748355_3751019_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|318aa|up_5|NC_017623.1_3751462_3752416_+	PRK15379, PRK15379, type III secretion system effector SopD	NA|245aa|up_4|NC_017623.1_3752628_3753363_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|571aa|up_3|NC_017623.1_3753438_3755151_-	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|600aa|up_2|NC_017623.1_3755150_3756950_-	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|121aa|up_1|NC_017623.1_3757373_3757736_+	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|266aa|up_0|NC_017623.1_3757825_3758623_-	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only]	NA|224aa|down_0|NC_017623.1_3760143_3760815_-	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|433aa|down_1|NC_017623.1_3760950_3762249_-	PRK00077, eno, enolase; Provisional	NA|546aa|down_2|NC_017623.1_3762331_3763969_-	PRK05380, pyrG, CTP synthetase; Validated	NA|267aa|down_3|NC_017623.1_3764196_3764997_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|196aa|down_4|NC_017623.1_3765601_3766189_+	PRK15261, PRK15261, fimbrial protein SteA; Provisional	NA|900aa|down_5|NC_017623.1_3766268_3768968_+	PRK15273, PRK15273, fimbrial biogenesis outer membrane usher protein	NA|258aa|down_6|NC_017623.1_3768980_3769754_+	PRK15274, PRK15274, putative periplasmic fimbrial chaperone protein SteC; Provisional	NA|169aa|down_7|NC_017623.1_3769773_3770280_+	PRK15275, PRK15275, putative fimbrial protein SteD; Provisional	NA|157aa|down_8|NC_017623.1_3770294_3770765_+	PRK15276, PRK15276, putative fimbrial subunit SteE; Provisional	NA|179aa|down_9|NC_017623.1_3770761_3771298_+	PRK15260, PRK15260, fimbrial protein SteF; Provisional
GCF_000258365.1_ASM25836v1	NC_017624	Salmonella enterica subsp. enterica serovar Heidelberg str. B182 plasmid pB182_37, complete sequence	1	23646-23765	1	CRISPRCasFinder	no			Orphan	TGAAAGGTGGATGGGTACGCACTGAAAGGTGGATAGGTACGCA	43	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,DinG,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	NA|182aa|up_9|NC_017624.1_19278_19824_-,NA|91aa|up_8|NC_017624.1_20149_20422_-,NA|66aa|up_7|NC_017624.1_20434_20632_-,NA|60aa|up_6|NC_017624.1_20653_20833_-,NA|110aa|up_5|NC_017624.1_20875_21205_-,NA|72aa|up_4|NC_017624.1_21297_21513_-,NA|82aa|up_3|NC_017624.1_21502_21748_-,NA|108aa|up_2|NC_017624.1_21792_22116_-,NA|71aa|down_0|NC_017624.1_24855_25068_+,NA|139aa|down_1|NC_017624.1_25240_25657_+,NA|326aa|down_2|NC_017624.1_25653_26631_-,NA|94aa|down_3|NC_017624.1_26655_26937_-,NA|28aa|down_5|NC_017624.1_28764_28848_-,NA|117aa|down_6|NC_017624.1_30655_31006_+,NA|170aa|down_7|NC_017624.1_31089_31599_+	NA|182aa|up_9|NC_017624.1_19278_19824_-	NA	NA|91aa|up_8|NC_017624.1_20149_20422_-	NA	NA|66aa|up_7|NC_017624.1_20434_20632_-	NA	NA|60aa|up_6|NC_017624.1_20653_20833_-	NA	NA|110aa|up_5|NC_017624.1_20875_21205_-	NA	NA|72aa|up_4|NC_017624.1_21297_21513_-	NA	NA|82aa|up_3|NC_017624.1_21502_21748_-	NA	NA|108aa|up_2|NC_017624.1_21792_22116_-	NA	NA|94aa|up_1|NC_017624.1_22261_22543_-	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning]	NA|84aa|up_0|NC_017624.1_22532_22784_-	PRK02854, PRK02854, primosomal protein DnaT	NA|71aa|down_0|NC_017624.1_24855_25068_+	NA	NA|139aa|down_1|NC_017624.1_25240_25657_+	NA	NA|326aa|down_2|NC_017624.1_25653_26631_-	NA	NA|94aa|down_3|NC_017624.1_26655_26937_-	NA	NA|215aa|down_4|NC_017624.1_27965_28610_+	cd03767, SR_Res_par, Serine recombinase (SR) family, Partitioning (par)-Resolvase subfamily, catalytic domain; Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme	NA|28aa|down_5|NC_017624.1_28764_28848_-	NA	NA|117aa|down_6|NC_017624.1_30655_31006_+	NA	NA|170aa|down_7|NC_017624.1_31089_31599_+	NA	NA|634aa|down_8|NC_017624.1_31704_33606_+	pfam13175, AAA_15, AAA ATPase domain	NA|844aa|down_9|NC_017624.1_34878_37410_+	COG1204, COG1204, Superfamily II helicase [General function prediction only]
