assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000258025.1_ASM25802v1	NC_017660	Escherichia coli KO11FL, complete sequence	1	1516308-1516425	1	CRISPRCasFinder	no		DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DinG,WYL	Orphan	TGCCGGATGCGATGCTGGCGCACCTTATCCGGCCTACGGG	40	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DinG,WYL	NA,NA|55aa|down_0|NC_017660.1_1516498_1516663_-	NA|115aa|up_9|NC_017660.1_1504029_1504374_-	PRK11424, PRK11424, DNA-binding transcriptional activator TdcR; Provisional	NA|313aa|up_8|NC_017660.1_1504562_1505501_+	PRK10341, PRK10341, transcriptional regulator TdcA	NA|330aa|up_7|NC_017660.1_1505599_1506589_+	PRK08638, PRK08638, bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA|444aa|up_6|NC_017660.1_1506610_1507942_+	PRK13629, PRK13629, threonine/serine transporter TdcC; Provisional	NA|403aa|up_5|NC_017660.1_1507967_1509176_+	PRK12379, PRK12379, propionate kinase	NA|765aa|up_4|NC_017660.1_1509209_1511504_+	cd01678, PFL1, Pyruvate formate lyase 1	NA|130aa|up_3|NC_017660.1_1511517_1511907_+	PRK11401, PRK11401, enamine/imine deaminase	NA|455aa|up_2|NC_017660.1_1511978_1513343_+	PRK15040, PRK15040, L-serine ammonia-lyase	NA|444aa|up_1|NC_017660.1_1513617_1514949_+	TIGR00814, membrane_transport_protein_YhjV, serine transporter	NA|437aa|up_0|NC_017660.1_1514976_1516287_+	COG3681, COG3681, L-cysteine desulfidase [Amino acid transport and metabolism]	NA|55aa|down_0|NC_017660.1_1516498_1516663_-	NA	NA|234aa|down_1|NC_017660.1_1516685_1517387_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|299aa|down_2|NC_017660.1_1517491_1518388_+	cd08431, PBP2_HupR, The C-terminal substrate binding domain of LysR-type transcriptional regulator, HupR, which regulates expression of the heme uptake receptor HupA; contains the type 2 periplasmic binding fold	NA|119aa|down_3|NC_017660.1_1518438_1518795_-	COG3152, COG3152, Predicted membrane protein [Function unknown]	NA|122aa|down_4|NC_017660.1_1519036_1519402_-	COG3152, COG3152, Predicted membrane protein [Function unknown]	NA|131aa|down_5|NC_017660.1_1522089_1522482_-	COG2259, COG2259, Predicted membrane protein [Function unknown]	NA|100aa|down_6|NC_017660.1_1522667_1522967_-	pfam13997, YqjK, YqjK-like protein	NA|135aa|down_7|NC_017660.1_1522956_1523361_-	COG5393, COG5393, Predicted membrane protein [Function unknown]	NA|102aa|down_8|NC_017660.1_1523363_1523669_-	COG4575, ElaB, Uncharacterized conserved protein [Function unknown]	NA|123aa|down_9|NC_017660.1_1523706_1524075_-	pfam06476, DUF1090, Protein of unknown function (DUF1090)
GCF_000258025.1_ASM25802v1	NC_017660	Escherichia coli KO11FL, complete sequence	2	1935707-1936346	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3	DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DinG,WYL	Unclear	GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	10,10,10	10	Unclear	DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DinG,WYL	NA|47aa|up_1|NC_017660.1_1934416_1934557_-,NA	NA|434aa|up_9|NC_017660.1_1925113_1926415_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_8|NC_017660.1_1926462_1928697_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_7|NC_017660.1_1928774_1929023_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_6|NC_017660.1_1929022_1929358_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_5|NC_017660.1_1929428_1930220_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_4|NC_017660.1_1930447_1932085_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_3|NC_017660.1_1932172_1933471_+	PRK00077, eno, enolase; Provisional	NA|291aa|up_2|NC_017660.1_1933530_1934403_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|47aa|up_1|NC_017660.1_1934416_1934557_-	NA	NA|224aa|up_0|NC_017660.1_1934695_1935367_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NC_017660.1_1936984_1938463_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|NC_017660.1_1938489_1939767_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|NC_017660.1_1940085_1940871_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|NC_017660.1_1940940_1942395_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|470aa|down_4|NC_017660.1_1942416_1943826_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_5|NC_017660.1_1943803_1944583_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|287aa|down_6|NC_017660.1_1944579_1945440_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_7|NC_017660.1_1945587_1946163_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_8|NC_017660.1_1946179_1946440_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_9|NC_017660.1_1946430_1947702_-	PRK10015, PRK10015, oxidoreductase; Provisional
GCF_000258025.1_ASM25802v1	NC_017660	Escherichia coli KO11FL, complete sequence	3	1962050-1962932	2,3,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DinG,WYL	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	14,14,14	14	TypeI-E	DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DinG,WYL	NA,NA	NA|245aa|up_9|NC_017660.1_1952045_1952780_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|51aa|up_8|NC_017660.1_1953044_1953197_+	pfam01848, HOK_GEF, Hok/gef family	cas3|900aa|up_7|NC_017660.1_1953391_1956091_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|521aa|up_6|NC_017660.1_1956188_1957751_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|180aa|up_5|NC_017660.1_1957747_1958287_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|352aa|up_4|NC_017660.1_1958298_1959354_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_3|NC_017660.1_1959364_1960111_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|NC_017660.1_1960092_1960743_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|307aa|up_1|NC_017660.1_1960739_1961660_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|NC_017660.1_1961659_1961953_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NC_017660.1_1963013_1964051_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NC_017660.1_1964302_1965211_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NC_017660.1_1965212_1966640_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NC_017660.1_1966639_1967245_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NC_017660.1_1967294_1967618_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NC_017660.1_1967811_1968123_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NC_017660.1_1968141_1968852_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NC_017660.1_1968851_1969331_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NC_017660.1_1969327_1970377_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NC_017660.1_1970357_1971119_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_000258025.1_ASM25802v1	NC_017660	Escherichia coli KO11FL, complete sequence	4	3065929-3066052	4	CRISPRCasFinder	no	DEDDh	DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DinG,WYL	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DinG,WYL	NA,NA|30aa|down_7|NC_017660.1_3074948_3075038_+	NA|471aa|up_9|NC_017660.1_3055382_3056795_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NC_017660.1_3057351_3057561_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NC_017660.1_3058016_3058643_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NC_017660.1_3058663_3060766_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|213aa|up_5|NC_017660.1_3060778_3061417_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NC_017660.1_3061480_3062149_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NC_017660.1_3062145_3062931_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NC_017660.1_3062934_3063747_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NC_017660.1_3063758_3065363_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NC_017660.1_3065488_3065794_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NC_017660.1_3066366_3067623_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NC_017660.1_3067663_3069037_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NC_017660.1_3069251_3069893_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NC_017660.1_3069932_3071081_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NC_017660.1_3071371_3072583_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NC_017660.1_3072695_3073628_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NC_017660.1_3073624_3074650_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NC_017660.1_3074948_3075038_+	NA	NA|390aa|down_8|NC_017660.1_3075203_3076373_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|327aa|down_9|NC_017660.1_3076664_3077645_-	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family
GCF_000258025.1_ASM25802v1	NC_017660	Escherichia coli KO11FL, complete sequence	5	3715406-3715497	5	CRISPRCasFinder	no		DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DinG,WYL	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DinG,WYL	NA|70aa|up_9|NC_017660.1_3704656_3704866_-,NA	NA|70aa|up_9|NC_017660.1_3704656_3704866_-	NA	NA|1321aa|up_8|NC_017660.1_3704920_3708883_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_7|NC_017660.1_3708922_3709561_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_6|NC_017660.1_3709848_3710940_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_5|NC_017660.1_3710939_3711632_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NC_017660.1_3711643_3712030_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_3|NC_017660.1_3712037_3712838_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NC_017660.1_3712847_3713438_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NC_017660.1_3713448_3713943_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NC_017660.1_3713963_3715292_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|199aa|down_0|NC_017660.1_3715920_3716517_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_1|NC_017660.1_3716537_3716765_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_2|NC_017660.1_3716802_3718044_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|307aa|down_3|NC_017660.1_3719853_3720774_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_4|NC_017660.1_3720773_3721079_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_5|NC_017660.1_3721171_3721771_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_6|NC_017660.1_3721767_3724314_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_7|NC_017660.1_3724313_3725486_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC	NA|231aa|down_8|NC_017660.1_3725615_3726308_+	PRK10766, PRK10766, two-component system response regulator TorR	NA|343aa|down_9|NC_017660.1_3726280_3727309_-	PRK10936, PRK10936, TMAO reductase system periplasmic protein TorT; Provisional
GCF_000258025.1_ASM25802v1	NC_017660	Escherichia coli KO11FL, complete sequence	6	4211635-4211779	6	CRISPRCasFinder	no		DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DinG,WYL	Orphan	GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	52	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DinG,WYL	NA,NA	NA|330aa|up_9|NC_017660.1_4199533_4200523_-	PRK00164, moaA, GTP 3',8-cyclase MoaA	NA|303aa|up_8|NC_017660.1_4200919_4201828_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|674aa|up_7|NC_017660.1_4202019_4204041_-	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|226aa|up_6|NC_017660.1_4204619_4205297_-	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD	NA|252aa|up_5|NC_017660.1_4205289_4206045_-	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional	NA|385aa|up_4|NC_017660.1_4206031_4207186_-	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed	NA|347aa|up_3|NC_017660.1_4207182_4208223_-	PRK15108, PRK15108, biotin synthase; Provisional	NA|430aa|up_2|NC_017660.1_4208309_4209599_+	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated	NA|159aa|up_1|NC_017660.1_4209657_4210134_+	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional	NA|428aa|up_0|NC_017660.1_4210285_4211569_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|754aa|down_0|NC_017660.1_4211802_4214064_-	PRK11413, PRK11413, putative hydratase; Provisional	NA|478aa|down_1|NC_017660.1_4214246_4215680_-	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|351aa|down_2|NC_017660.1_4215755_4216808_-	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|318aa|down_3|NC_017660.1_4216991_4217945_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|332aa|down_4|NC_017660.1_4217985_4218981_-	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|273aa|down_5|NC_017660.1_4219135_4219954_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|353aa|down_6|NC_017660.1_4219954_4221013_-	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|230aa|down_7|NC_017660.1_4221015_4221705_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|258aa|down_8|NC_017660.1_4221704_4222478_-	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|50aa|down_9|NC_017660.1_4222644_4222794_-	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ
GCF_000258025.1_ASM25802v1	NC_017660	Escherichia coli KO11FL, complete sequence	7	4628914-4629058	7	CRISPRCasFinder	no		DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DinG,WYL	Orphan	TAAACCGTAGGCCTGATAAGACGCGCAAAGCGTCGCATCAGGCAT	45	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DinG,WYL	NA,NA	NA|276aa|up_9|NC_017660.1_4619930_4620758_-	PRK10160, PRK10160, taurine ABC transporter permease TauC	NA|256aa|up_8|NC_017660.1_4620754_4621522_-	PRK11248, tauB, taurine ABC transporter ATP-binding subunit	NA|321aa|up_7|NC_017660.1_4621534_4622497_-	PRK11480, tauA, taurine transporter substrate binding subunit; Provisional	NA|224aa|up_6|NC_017660.1_4623112_4623784_+	COG2120, COG2120, Uncharacterized proteins, LmbE homologs [Function unknown]	NA|399aa|up_5|NC_017660.1_4623793_4624990_+	COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]	NA|194aa|up_4|NC_017660.1_4624967_4625549_+	cd05636, LbH_G1P_TT_C_like, Putative glucose-1-phosphate thymidylyltransferase, C-terminal Left-handed parallel beta-Helix (LbH) domain: Proteins in this family show simlarity to glucose-1-phosphate adenylyltransferases in that they contain N-terminal catalytic domains that resemble a dinucleotide-binding Rossmann fold and C-terminal LbH fold domains	NA|258aa|up_3|NC_017660.1_4625550_4626324_+	TIGR04390, hypothetical_protein, outer membrane protein, YaiO family	NA|92aa|up_2|NC_017660.1_4626508_4626784_+	PRK11352, PRK11352, formaldehyde-responsive transcriptional repressor FrmR	NA|370aa|up_1|NC_017660.1_4626818_4627928_+	cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases	NA|278aa|up_0|NC_017660.1_4628020_4628854_+	TIGR02821, S-formylglutathione_hydrolase, S-formylglutathione hydrolase	NA|180aa|down_0|NC_017660.1_4629079_4629619_-	COG3122, COG3122, Uncharacterized protein conserved in bacteria [Function unknown]	NA|404aa|down_1|NC_017660.1_4629720_4630932_-	PRK11551, PRK11551, putative 3-hydroxyphenylpropionic transporter MhpT; Provisional	NA|338aa|down_2|NC_017660.1_4631107_4632121_-	PRK08195, PRK08195, 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase,; Validated	NA|317aa|down_3|NC_017660.1_4632117_4633068_-	PRK08300, PRK08300, acetaldehyde dehydrogenase; Validated	NA|270aa|down_4|NC_017660.1_4633064_4633874_-	PRK11342, mhpD, 2-keto-4-pentenoate hydratase; Provisional	NA|289aa|down_5|NC_017660.1_4633883_4634750_-	TIGR03343, 2-hydroxy-6-oxo-6-phenylhexa-24-dienoate_hydrolase, 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase	NA|315aa|down_6|NC_017660.1_4634767_4635712_-	cd07365, MhpB_like, Subunit B of the Class III Extradiol ring-cleavage dioxygenase, 2,3-dihydroxyphenylpropionate 1,2-dioxygenase (MhpB), which catalyzes the oxidization and subsequent ring-opening of 2,3-dihydroxyphenylpropionate	NA|555aa|down_7|NC_017660.1_4635713_4637378_-	PRK06183, mhpA, bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase	NA|316aa|down_8|NC_017660.1_4637454_4638402_+	PRK09834, PRK09834, DNA-binding transcriptional regulator	NA|361aa|down_9|NC_017660.1_4638478_4639561_+	PRK09526, lacI, lac repressor; Reviewed
GCF_000258025.1_ASM25802v1	NC_017660	Escherichia coli KO11FL, complete sequence	8	4746913-4747006	8	CRISPRCasFinder	no		DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DinG,WYL	Orphan	GGGGACTGATTTGTGCGCGTTGTTACATCG	30	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DinG,WYL	NA|326aa|up_5|NC_017660.1_4741233_4742211_-,NA|310aa|down_9|NC_017660.1_4753197_4754127_+	NA|439aa|up_9|NC_017660.1_4736071_4737388_-	PRK08032, fliD, flagellar capping protein; Reviewed	NA|305aa|up_8|NC_017660.1_4737594_4738509_-	NF033376, flg_lateral_LafA, lateral flagellin LafA	NA|403aa|up_7|NC_017660.1_4738966_4740175_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|281aa|up_6|NC_017660.1_4740332_4741175_+	COG3710, CadC, DNA-binding winged-HTH domains [Transcription]	NA|326aa|up_5|NC_017660.1_4741233_4742211_-	NA	NA|310aa|up_4|NC_017660.1_4742227_4743157_-	PRK07192, flgL, flagellar hook-associated protein FlgL; Reviewed	NA|459aa|up_3|NC_017660.1_4743171_4744548_-	PRK07191, flgK, flagellar hook-associated protein FlgK; Validated	NA|100aa|up_2|NC_017660.1_4744730_4745030_-	PRK12708, flgJ, peptidoglycan hydrolase; Reviewed	NA|367aa|up_1|NC_017660.1_4745029_4746130_-	PRK05303, flgI, flagellar basal body P-ring protein FlgI	NA|222aa|up_0|NC_017660.1_4746144_4746810_-	PRK12407, flgH, flagellar basal body L-ring protein FlgH	NA|262aa|down_0|NC_017660.1_4747081_4747867_-	PRK12693, flgG, flagellar basal body rod protein FlgG; Provisional	NA|246aa|down_1|NC_017660.1_4747945_4748683_-	PRK12640, flgF, flagellar basal body rod protein FlgF; Reviewed	NA|401aa|down_2|NC_017660.1_4748682_4749885_-	PRK06803, flgE, flagellar basal body protein FlaE	NA|238aa|down_3|NC_017660.1_4749969_4750683_-	PRK09619, flgD, flagellar hook assembly protein FlgD	NA|144aa|down_4|NC_017660.1_4750682_4751114_-	PRK06802, flgC, flagellar basal body rod protein FlgC; Reviewed	NA|112aa|down_5|NC_017660.1_4751116_4751452_-	PRK12685, flgB, flagellar basal body rod protein FlgB; Reviewed	NA|246aa|down_6|NC_017660.1_4751533_4752271_+	PRK06804, flgA, flagellar basal body P-ring formation protein FlgA	NA|93aa|down_7|NC_017660.1_4752351_4752630_+	TIGR03824, FlgM_jcvi, flagellar biosynthesis anti-sigma factor FlgM	NA|143aa|down_8|NC_017660.1_4752642_4753071_+	pfam05130, FlgN, FlgN protein	NA|310aa|down_9|NC_017660.1_4753197_4754127_+	NA
