assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000255135.1_ASM25513v1	NC_016751	Marinitoga piezophila KA3, complete sequence	1	289919-290816	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas6,cas8b2,cas7,cas5,cas3,cas4,cas1,cas2	csa3,cas3,cas6,cas8b2,cas7,cas5,cas4,cas1,cas2,PrimPol,csx1,csm6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,DEDDh	Unclear	CTTTCTACAGTACCTATAAGGAATTGAAAT,CTTTCTACAGTACCTATAAGGAATTGAAAT,CTTTCTACAGTACCTATAAGGAATTGAAAT	30,30,30	0	0	NA	NA	NA:NA:NA	12,12,13	13	Unclear	csa3,cas3,cas6,cas8b2,cas7,cas5,cas4,cas1,cas2,PrimPol,csx1,csm6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,DEDDh	NA|415aa|up_9|NC_016751.1_279259_280504_+,NA|197aa|up_8|NC_016751.1_280546_281137_+,NA|58aa|down_0|NC_016751.1_294444_294618_+,NA|177aa|down_1|NC_016751.1_294693_295224_-,NA|270aa|down_5|NC_016751.1_301083_301893_+,NA|54aa|down_7|NC_016751.1_303450_303612_-	NA|415aa|up_9|NC_016751.1_279259_280504_+	NA	NA|197aa|up_8|NC_016751.1_280546_281137_+	NA	cas6|252aa|up_7|NC_016751.1_281552_282308_+	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6	cas8b2|460aa|up_6|NC_016751.1_282403_283783_+	cd09665, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1	cas7|351aa|up_5|NC_016751.1_283795_284848_+	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas5|219aa|up_4|NC_016751.1_284850_285507_+	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP	cas3|784aa|up_3|NC_016751.1_285557_287909_+	cd09639, Cas3_I, CRISPR/Cas system-associated protein Cas3	cas4|162aa|up_2|NC_016751.1_288009_288495_+	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas1|332aa|up_1|NC_016751.1_288499_289495_+	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1	cas2|87aa|up_0|NC_016751.1_289497_289758_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|58aa|down_0|NC_016751.1_294444_294618_+	NA	NA|177aa|down_1|NC_016751.1_294693_295224_-	NA	NA|577aa|down_2|NC_016751.1_295872_297603_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|585aa|down_3|NC_016751.1_297603_299358_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|425aa|down_4|NC_016751.1_299456_300731_-	PRK12391, PRK12391, TrpB-like pyridoxal phosphate-dependent enzyme	NA|270aa|down_5|NC_016751.1_301083_301893_+	NA	NA|490aa|down_6|NC_016751.1_301978_303448_-	smart00857, Resolvase, Resolvase, N terminal domain	NA|54aa|down_7|NC_016751.1_303450_303612_-	NA	NA|124aa|down_8|NC_016751.1_303768_304140_-	pfam14213, DUF4325, STAS-like domain of unknown function (DUF4325)	NA|322aa|down_9|NC_016751.1_304156_305122_-	cd07042, STAS_SulP_like_sulfate_transporter, Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function
GCF_000255135.1_ASM25513v1	NC_016751	Marinitoga piezophila KA3, complete sequence	2	293786-294417	2,2,2	CRT,CRISPRCasFinder,PILER-CR	no	cas6,cas8b2,cas7,cas5,cas3,cas4,cas1,cas2	csa3,cas3,cas6,cas8b2,cas7,cas5,cas4,cas1,cas2,PrimPol,csx1,csm6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,DEDDh	Unclear	TTTCTACAGTACCTATAAGGAATTGAAA,CTTTCTACAGTACCTATAAGGAATTGAAAT,GTACCTATAAGGAATTGAAA	28,30,20	0	0	NA	NA	NA:NA:NA	9,8,8	9	Unclear	csa3,cas3,cas6,cas8b2,cas7,cas5,cas4,cas1,cas2,PrimPol,csx1,csm6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,DEDDh	NA|415aa|up_9|NC_016751.1_279259_280504_+,NA|197aa|up_8|NC_016751.1_280546_281137_+,NA|58aa|down_0|NC_016751.1_294444_294618_+,NA|177aa|down_1|NC_016751.1_294693_295224_-,NA|270aa|down_5|NC_016751.1_301083_301893_+,NA|54aa|down_7|NC_016751.1_303450_303612_-	NA|415aa|up_9|NC_016751.1_279259_280504_+	NA	NA|197aa|up_8|NC_016751.1_280546_281137_+	NA	cas6|252aa|up_7|NC_016751.1_281552_282308_+	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6	cas8b2|460aa|up_6|NC_016751.1_282403_283783_+	cd09665, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1	cas7|351aa|up_5|NC_016751.1_283795_284848_+	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas5|219aa|up_4|NC_016751.1_284850_285507_+	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP	cas3|784aa|up_3|NC_016751.1_285557_287909_+	cd09639, Cas3_I, CRISPR/Cas system-associated protein Cas3	cas4|162aa|up_2|NC_016751.1_288009_288495_+	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas1|332aa|up_1|NC_016751.1_288499_289495_+	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1	cas2|87aa|up_0|NC_016751.1_289497_289758_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|58aa|down_0|NC_016751.1_294444_294618_+	NA	NA|177aa|down_1|NC_016751.1_294693_295224_-	NA	NA|577aa|down_2|NC_016751.1_295872_297603_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|585aa|down_3|NC_016751.1_297603_299358_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|425aa|down_4|NC_016751.1_299456_300731_-	PRK12391, PRK12391, TrpB-like pyridoxal phosphate-dependent enzyme	NA|270aa|down_5|NC_016751.1_301083_301893_+	NA	NA|490aa|down_6|NC_016751.1_301978_303448_-	smart00857, Resolvase, Resolvase, N terminal domain	NA|54aa|down_7|NC_016751.1_303450_303612_-	NA	NA|124aa|down_8|NC_016751.1_303768_304140_-	pfam14213, DUF4325, STAS-like domain of unknown function (DUF4325)	NA|322aa|down_9|NC_016751.1_304156_305122_-	cd07042, STAS_SulP_like_sulfate_transporter, Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function
GCF_000255135.1_ASM25513v1	NC_016751	Marinitoga piezophila KA3, complete sequence	3	396000-397721	3,3,3	PILER-CR,CRISPRCasFinder,CRT	no	PrimPol,cas1,cas2,csx1,csm6,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7	csa3,cas3,cas6,cas8b2,cas7,cas5,cas4,cas1,cas2,PrimPol,csx1,csm6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,DEDDh	Type III-A,Type III-B,Type III-D,Type III-C	ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC,ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC,ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	36,36,36	0	0	NA	NA	NA:NA:NA	22,22,22	22	TypeIII-D,TypeIII-B,TypeIII-A,TypeIII-C	csa3,cas3,cas6,cas8b2,cas7,cas5,cas4,cas1,cas2,PrimPol,csx1,csm6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,DEDDh	NA,NA|52aa|down_4|NC_016751.1_402827_402983_-	NA|369aa|up_9|NC_016751.1_384147_385254_-	cd01117, YbiR_permease, Putative anion permease YbiR	NA|319aa|up_8|NC_016751.1_385297_386254_-	TIGR02966, Phosphate_regulon_sensor_protein_PhoR, phosphate regulon sensor kinase PhoR	NA|226aa|up_7|NC_016751.1_386255_386933_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|221aa|up_6|NC_016751.1_386943_387606_-	TIGR02135, Uncharacterized_protein, phosphate transport system regulatory protein PhoU	NA|261aa|up_5|NC_016751.1_387619_388402_-	COG1117, PstB, ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|275aa|up_4|NC_016751.1_388391_389216_-	COG0581, PstA, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism]	NA|280aa|up_3|NC_016751.1_389202_390042_-	COG0573, PstC, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism]	NA|277aa|up_2|NC_016751.1_390085_390916_-	cd13566, PBP2_phosphate, Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily	NA|724aa|up_1|NC_016751.1_391137_393309_+	pfam03030, H_PPase, Inorganic H+ pyrophosphatase	NA|488aa|up_0|NC_016751.1_394057_395521_+	pfam11443, DUF2828, Domain of unknown function (DUF2828)	PrimPol|547aa|down_0|NC_016751.1_397860_399501_+	COG4951, COG4951, Uncharacterized protein conserved in bacteria [Function unknown]	cas1|335aa|down_1|NC_016751.1_399513_400518_+	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	cas2|93aa|down_2|NC_016751.1_400518_400797_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|640aa|down_3|NC_016751.1_400813_402733_+	cd04659, Piwi_piwi-like_ProArk, Piwi_piwi-like_ProArk: PIWI domain, Piwi-like subfamily found in Archaea and Bacteria	NA|52aa|down_4|NC_016751.1_402827_402983_-	NA	csx1|564aa|down_5|NC_016751.1_403243_404935_-	pfam09455, Cas_DxTHG, CRISPR-associated (Cas) DxTHG family	csm6|379aa|down_6|NC_016751.1_404945_406082_-	cd09742, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	cas6|274aa|down_7|NC_016751.1_406074_406896_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	cmr6gr7|253aa|down_8|NC_016751.1_406882_407641_-	COG1604, COG1604, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	cmr5gr11|118aa|down_9|NC_016751.1_407637_407991_-	pfam09701, Cas_Cmr5, CRISPR-associated protein (Cas_Cmr5)
GCF_000255135.1_ASM25513v1	NC_016751	Marinitoga piezophila KA3, complete sequence	4	414191-414612	4,4,4	PILER-CR,CRISPRCasFinder,CRT	no	PrimPol,cas1,cas2,csx1,csm6,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7	csa3,cas3,cas6,cas8b2,cas7,cas5,cas4,cas1,cas2,PrimPol,csx1,csm6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,DEDDh	Type III-A,Type III-B,Type III-D,Type III-C	ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC,ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC,ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC	36,36,36	0	0	NA	NA	NA:NA:NA	4,5,5	5	TypeIII-D,TypeIII-B,TypeIII-A,TypeIII-C	csa3,cas3,cas6,cas8b2,cas7,cas5,cas4,cas1,cas2,PrimPol,csx1,csm6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,DEDDh	NA|52aa|up_9|NC_016751.1_402827_402983_-,NA|450aa|down_4|NC_016751.1_421907_423257_+,NA|295aa|down_5|NC_016751.1_423268_424153_+	NA|52aa|up_9|NC_016751.1_402827_402983_-	NA	csx1|564aa|up_8|NC_016751.1_403243_404935_-	pfam09455, Cas_DxTHG, CRISPR-associated (Cas) DxTHG family	csm6|379aa|up_7|NC_016751.1_404945_406082_-	cd09742, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	cas6|274aa|up_6|NC_016751.1_406074_406896_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	cmr6gr7|253aa|up_5|NC_016751.1_406882_407641_-	COG1604, COG1604, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	cmr5gr11|118aa|up_4|NC_016751.1_407637_407991_-	pfam09701, Cas_Cmr5, CRISPR-associated protein (Cas_Cmr5)	cmr4gr7|276aa|up_3|NC_016751.1_408000_408828_-	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4	cmr3gr5|326aa|up_2|NC_016751.1_408841_409819_-	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3	cas10|787aa|up_1|NC_016751.1_409805_412166_-	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr1gr7|418aa|up_0|NC_016751.1_412162_413416_-	COG1367, COG1367, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	NA|556aa|down_0|NC_016751.1_414675_416343_+	pfam09820, AAA-ATPase_like, Predicted AAA-ATPase	NA|731aa|down_1|NC_016751.1_416375_418568_-	pfam14014, DUF4230, Protein of unknown function (DUF4230)	NA|289aa|down_2|NC_016751.1_418564_419431_-	COG3086, RseC, Positive regulator of sigma E activity [Signal transduction mechanisms]	NA|775aa|down_3|NC_016751.1_419451_421776_-	COG0265, DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain [Posttranslational modification, protein turnover, chaperones]	NA|450aa|down_4|NC_016751.1_421907_423257_+	NA	NA|295aa|down_5|NC_016751.1_423268_424153_+	NA	NA|171aa|down_6|NC_016751.1_424180_424693_+	COG3339, COG3339, Uncharacterized conserved protein [Function unknown]	NA|224aa|down_7|NC_016751.1_427313_427985_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|333aa|down_8|NC_016751.1_427981_428980_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|377aa|down_9|NC_016751.1_429151_430282_-	cd00839, MPP_PAPs, purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain
GCF_000255135.1_ASM25513v1	NC_016751	Marinitoga piezophila KA3, complete sequence	5	425317-426729	5,5,5	PILER-CR,CRISPRCasFinder,CRT	no	cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7	csa3,cas3,cas6,cas8b2,cas7,cas5,cas4,cas1,cas2,PrimPol,csx1,csm6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,DEDDh	Type III-A,Type III-B,Type III-D,Type III-C	ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC,ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAC,ATCCGAATATAACTACTCTCTGAAAGAGATAGAAAC	36,36,36	0	0	NA	NA	NA:NA:NA	18,18,18	18	TypeIII-D,TypeIII-B,TypeIII-A,TypeIII-C	csa3,cas3,cas6,cas8b2,cas7,cas5,cas4,cas1,cas2,PrimPol,csx1,csm6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,DEDDh	NA|450aa|up_2|NC_016751.1_421907_423257_+,NA|295aa|up_1|NC_016751.1_423268_424153_+,NA	cmr3gr5|326aa|up_9|NC_016751.1_408841_409819_-	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3	cas10|787aa|up_8|NC_016751.1_409805_412166_-	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr1gr7|418aa|up_7|NC_016751.1_412162_413416_-	COG1367, COG1367, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	NA|556aa|up_6|NC_016751.1_414675_416343_+	pfam09820, AAA-ATPase_like, Predicted AAA-ATPase	NA|731aa|up_5|NC_016751.1_416375_418568_-	pfam14014, DUF4230, Protein of unknown function (DUF4230)	NA|289aa|up_4|NC_016751.1_418564_419431_-	COG3086, RseC, Positive regulator of sigma E activity [Signal transduction mechanisms]	NA|775aa|up_3|NC_016751.1_419451_421776_-	COG0265, DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain [Posttranslational modification, protein turnover, chaperones]	NA|450aa|up_2|NC_016751.1_421907_423257_+	NA	NA|295aa|up_1|NC_016751.1_423268_424153_+	NA	NA|171aa|up_0|NC_016751.1_424180_424693_+	COG3339, COG3339, Uncharacterized conserved protein [Function unknown]	NA|224aa|down_0|NC_016751.1_427313_427985_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|333aa|down_1|NC_016751.1_427981_428980_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|377aa|down_2|NC_016751.1_429151_430282_-	cd00839, MPP_PAPs, purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain	NA|514aa|down_3|NC_016751.1_430338_431880_+	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]	NA|355aa|down_4|NC_016751.1_431948_433013_+	PRK00591, prfA, peptide chain release factor 1; Validated	NA|131aa|down_5|NC_016751.1_433434_433827_+	TIGR00004, RutC_family_protein, reactive intermediate/imine deaminase	NA|641aa|down_6|NC_016751.1_433863_435786_+	PRK00413, thrS, threonyl-tRNA synthetase; Reviewed	NA|427aa|down_7|NC_016751.1_435921_437202_+	cd00038, CAP_ED, effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor	NA|429aa|down_8|NC_016751.1_437222_438509_+	cd00038, CAP_ED, effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor	NA|336aa|down_9|NC_016751.1_438519_439527_+	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase
