assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000253215.1_ASM25321v1	NC_017512	Neisseria meningitidis WUE 2594, complete genome	1	38328-38421	1	CRISPRCasFinder	no		DEDDh,cas2,cas1,cas9,cas3,DinG	Orphan	GCAATATTCAAAGTTTATAAAAGACC	26	1	2	38354-38395|38354-38395	NC_017512.1_349614-349573|NC_017512.1_2202337-2202296	NA	1	1	Orphan	DEDDh,cas2,cas1,cas9,cas3,DinG	NA,NA|65aa|down_1|NC_017512.1_39560_39755_-,NA|72aa|down_6|NC_017512.1_53795_54011_-	NA|422aa|up_9|NC_017512.1_28510_29776_+	TIGR01412, Probable_deferrochelatase/peroxidase_EfeN, Tat-translocated enzyme	NA|110aa|up_8|NC_017512.1_29847_30177_-	COG2824, PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism [Inorganic ion transport and metabolism]	NA|457aa|up_7|NC_017512.1_30253_31624_-	TIGR01173, Bifunctional_glmU_protein_	NA|91aa|up_6|NC_017512.1_31678_31951_-	pfam08139, LPAM_1, Prokaryotic membrane lipoprotein lipid attachment site	NA|244aa|up_5|NC_017512.1_31926_32658_-	TIGR01993, Suppressor_of_disruption_of_TFIIS, pyrimidine 5'-nucleotidase	NA|334aa|up_4|NC_017512.1_32716_33718_+	TIGR01254, Thiamine-binding_periplasmic_protein, ABC transporter periplasmic binding protein, thiB subfamily	NA|283aa|up_3|NC_017512.1_33811_34660_+	COG0668, MscS, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane]	NA|162aa|up_2|NC_017512.1_34685_35171_+	pfam02464, CinA, Competence-damaged protein	NA|523aa|up_1|NC_017512.1_35272_36841_-	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	NA|422aa|up_0|NC_017512.1_36985_38251_+	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional	NA|95aa|down_0|NC_017512.1_38839_39124_+	cd10448, GIY-YIG_unchar_3, GIY-YIG domain of uncharacterized hypothetical protein found in bacteria	NA|65aa|down_1|NC_017512.1_39560_39755_-	NA	NA|1004aa|down_2|NC_017512.1_39804_42816_+	COG3419, PilY1, Tfp pilus assembly protein, tip-associated adhesin PilY1 [Cell motility and secretion / Intracellular trafficking and secretion]	NA|1390aa|down_3|NC_017512.1_44249_48419_-	COG2911, COG2911, Uncharacterized protein conserved in bacteria [Function unknown]	NA|616aa|down_4|NC_017512.1_48473_50321_-	COG0729, COG0729, Outer membrane protein [Cell envelope biogenesis, outer membrane]	NA|498aa|down_5|NC_017512.1_52227_53721_+	pfam01298, TbpB_B_D, C-lobe and N-lobe beta barrels of Tf-binding protein B	NA|72aa|down_6|NC_017512.1_53795_54011_-	NA	NA|72aa|down_7|NC_017512.1_54003_54219_-	pfam13783, DUF4177, Domain of unknown function (DUF4177)	NA|448aa|down_8|NC_017512.1_54425_55769_-	PRK05370, PRK05370, argininosuccinate synthase; Validated	NA|267aa|down_9|NC_017512.1_55893_56694_+	COG1058, CinA, Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]
GCF_000253215.1_ASM25321v1	NC_017512	Neisseria meningitidis WUE 2594, complete genome	2	43366-43541	2	CRISPRCasFinder	no		DEDDh,cas2,cas1,cas9,cas3,DinG	Orphan	CTAGATTCCCGCTTTCGCGGGAATGACGG	29	2	19	43395-43439|43395-43439|43395-43439|43395-43439|43395-43439|43395-43439|43395-43439|43395-43439|43395-43439|43395-43439|43395-43439|43395-43439|43395-43439|43395-43439|43469-43511|43469-43511|43469-43511|43469-43511|43469-43511	NC_017512.1_14455-14499|NC_017512.1_39233-39277|NC_017512.1_349357-349313|NC_017512.1_633695-633739|NC_017512.1_633934-633978|NC_017512.1_1450911-1450867|NC_017512.1_1451183-1451139|NC_017512.1_1458486-1458442|NC_017512.1_1727358-1727314|NC_017512.1_1734030-1733986|NC_017512.1_130407-130451|NC_017512.1_131154-131198|NC_017512.1_131746-131790|NC_017512.1_2202232-2202188|NC_017512.1_1457546-1457504|NC_017512.1_1457798-1457756|NC_017512.1_1458412-1458370|NC_017512.1_1727284-1727242|NC_017512.1_1733956-1733914	I-E	2	2	Orphan	DEDDh,cas2,cas1,cas9,cas3,DinG	NA|65aa|up_1|NC_017512.1_39560_39755_-,NA|72aa|down_3|NC_017512.1_53795_54011_-,NA|125aa|down_8|NC_017512.1_58676_59051_-	NA|91aa|up_9|NC_017512.1_31678_31951_-	pfam08139, LPAM_1, Prokaryotic membrane lipoprotein lipid attachment site	NA|244aa|up_8|NC_017512.1_31926_32658_-	TIGR01993, Suppressor_of_disruption_of_TFIIS, pyrimidine 5'-nucleotidase	NA|334aa|up_7|NC_017512.1_32716_33718_+	TIGR01254, Thiamine-binding_periplasmic_protein, ABC transporter periplasmic binding protein, thiB subfamily	NA|283aa|up_6|NC_017512.1_33811_34660_+	COG0668, MscS, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane]	NA|162aa|up_5|NC_017512.1_34685_35171_+	pfam02464, CinA, Competence-damaged protein	NA|523aa|up_4|NC_017512.1_35272_36841_-	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	NA|422aa|up_3|NC_017512.1_36985_38251_+	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional	NA|95aa|up_2|NC_017512.1_38839_39124_+	cd10448, GIY-YIG_unchar_3, GIY-YIG domain of uncharacterized hypothetical protein found in bacteria	NA|65aa|up_1|NC_017512.1_39560_39755_-	NA	NA|1004aa|up_0|NC_017512.1_39804_42816_+	COG3419, PilY1, Tfp pilus assembly protein, tip-associated adhesin PilY1 [Cell motility and secretion / Intracellular trafficking and secretion]	NA|1390aa|down_0|NC_017512.1_44249_48419_-	COG2911, COG2911, Uncharacterized protein conserved in bacteria [Function unknown]	NA|616aa|down_1|NC_017512.1_48473_50321_-	COG0729, COG0729, Outer membrane protein [Cell envelope biogenesis, outer membrane]	NA|498aa|down_2|NC_017512.1_52227_53721_+	pfam01298, TbpB_B_D, C-lobe and N-lobe beta barrels of Tf-binding protein B	NA|72aa|down_3|NC_017512.1_53795_54011_-	NA	NA|72aa|down_4|NC_017512.1_54003_54219_-	pfam13783, DUF4177, Domain of unknown function (DUF4177)	NA|448aa|down_5|NC_017512.1_54425_55769_-	PRK05370, PRK05370, argininosuccinate synthase; Validated	NA|267aa|down_6|NC_017512.1_55893_56694_+	COG1058, CinA, Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]	NA|329aa|down_7|NC_017512.1_56733_57720_+	COG0616, SppA, Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]	NA|125aa|down_8|NC_017512.1_58676_59051_-	NA	NA|119aa|down_9|NC_017512.1_59223_59580_-	pfam16779, DMP12, DNA-mimic protein
GCF_000253215.1_ASM25321v1	NC_017512	Neisseria meningitidis WUE 2594, complete genome	3	43842-43925	3	CRISPRCasFinder	no		DEDDh,cas2,cas1,cas9,cas3,DinG	Orphan	CTAGATTCCCGCTTTCGCGGGAATGACGG	29	1	3	43871-43896|43871-43896|43871-43896	NC_017512.1_651150-651175|NC_017512.1_652038-652063|NC_017512.1_1332531-1332556	I-E	1	1	Orphan	DEDDh,cas2,cas1,cas9,cas3,DinG	NA|65aa|up_1|NC_017512.1_39560_39755_-,NA|72aa|down_3|NC_017512.1_53795_54011_-,NA|125aa|down_8|NC_017512.1_58676_59051_-	NA|91aa|up_9|NC_017512.1_31678_31951_-	pfam08139, LPAM_1, Prokaryotic membrane lipoprotein lipid attachment site	NA|244aa|up_8|NC_017512.1_31926_32658_-	TIGR01993, Suppressor_of_disruption_of_TFIIS, pyrimidine 5'-nucleotidase	NA|334aa|up_7|NC_017512.1_32716_33718_+	TIGR01254, Thiamine-binding_periplasmic_protein, ABC transporter periplasmic binding protein, thiB subfamily	NA|283aa|up_6|NC_017512.1_33811_34660_+	COG0668, MscS, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane]	NA|162aa|up_5|NC_017512.1_34685_35171_+	pfam02464, CinA, Competence-damaged protein	NA|523aa|up_4|NC_017512.1_35272_36841_-	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	NA|422aa|up_3|NC_017512.1_36985_38251_+	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional	NA|95aa|up_2|NC_017512.1_38839_39124_+	cd10448, GIY-YIG_unchar_3, GIY-YIG domain of uncharacterized hypothetical protein found in bacteria	NA|65aa|up_1|NC_017512.1_39560_39755_-	NA	NA|1004aa|up_0|NC_017512.1_39804_42816_+	COG3419, PilY1, Tfp pilus assembly protein, tip-associated adhesin PilY1 [Cell motility and secretion / Intracellular trafficking and secretion]	NA|1390aa|down_0|NC_017512.1_44249_48419_-	COG2911, COG2911, Uncharacterized protein conserved in bacteria [Function unknown]	NA|616aa|down_1|NC_017512.1_48473_50321_-	COG0729, COG0729, Outer membrane protein [Cell envelope biogenesis, outer membrane]	NA|498aa|down_2|NC_017512.1_52227_53721_+	pfam01298, TbpB_B_D, C-lobe and N-lobe beta barrels of Tf-binding protein B	NA|72aa|down_3|NC_017512.1_53795_54011_-	NA	NA|72aa|down_4|NC_017512.1_54003_54219_-	pfam13783, DUF4177, Domain of unknown function (DUF4177)	NA|448aa|down_5|NC_017512.1_54425_55769_-	PRK05370, PRK05370, argininosuccinate synthase; Validated	NA|267aa|down_6|NC_017512.1_55893_56694_+	COG1058, CinA, Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]	NA|329aa|down_7|NC_017512.1_56733_57720_+	COG0616, SppA, Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]	NA|125aa|down_8|NC_017512.1_58676_59051_-	NA	NA|119aa|down_9|NC_017512.1_59223_59580_-	pfam16779, DMP12, DNA-mimic protein
GCF_000253215.1_ASM25321v1	NC_017512	Neisseria meningitidis WUE 2594, complete genome	4	136709-136813	4	CRISPRCasFinder	no		DEDDh,cas2,cas1,cas9,cas3,DinG	Orphan	GATTCCCACTTTCGTGGGAATGACGG	26	0	0	NA	NA	I-E	1	1	Orphan	DEDDh,cas2,cas1,cas9,cas3,DinG	NA,NA|62aa|down_0|NC_017512.1_136960_137146_-	NA|188aa|up_9|NC_017512.1_121675_122239_+	PRK09162, PRK09162, hypoxanthine-guanine phosphoribosyltransferase; Provisional	NA|146aa|up_8|NC_017512.1_122319_122757_+	COG2893, ManX, Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism]	NA|90aa|up_7|NC_017512.1_122825_123095_+	COG1925, FruB, Phosphotransferase system, HPr-related proteins [Carbohydrate transport and metabolism]	NA|592aa|up_6|NC_017512.1_123094_124870_+	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism]	NA|313aa|up_5|NC_017512.1_125312_126251_-	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|292aa|up_4|NC_017512.1_126259_127135_-	cd03676, Nudix_hydrolase_3, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|634aa|up_3|NC_017512.1_127732_129634_+	PRK09284, PRK09284, thiamine biosynthesis protein ThiC; Provisional	NA|330aa|up_2|NC_017512.1_132146_133136_-	pfam00267, Porin_1, Gram-negative porin	NA|106aa|up_1|NC_017512.1_134378_134696_-	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system	NA|266aa|up_0|NC_017512.1_135052_135850_-	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA	NA|62aa|down_0|NC_017512.1_136960_137146_-	NA	NA|231aa|down_1|NC_017512.1_137256_137949_-	COG1451, COG1451, Predicted metal-dependent hydrolase [General function prediction only]	NA|248aa|down_2|NC_017512.1_137945_138689_-	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|188aa|down_3|NC_017512.1_138717_139281_-	PRK08942, PRK08942, D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA|551aa|down_4|NC_017512.1_140017_141670_+	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane]	NA|414aa|down_5|NC_017512.1_142939_144181_-	PRK10483, PRK10483, tryptophan permease; Provisional	NA|243aa|down_6|NC_017512.1_144332_145061_+	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|306aa|down_7|NC_017512.1_145097_146015_+	TIGR00938, homoserine_kinase_homolog, homoserine kinase, Neisseria type	NA|173aa|down_8|NC_017512.1_146353_146872_-	TIGR01313, Thermosensitive_gluconokinase, carbohydrate kinase, thermoresistant glucokinase family	NA|462aa|down_9|NC_017512.1_146891_148277_-	COG2610, GntT, H+/gluconate symporter and related permeases [Carbohydrate transport and metabolism / Amino acid transport and metabolism]
GCF_000253215.1_ASM25321v1	NC_017512	Neisseria meningitidis WUE 2594, complete genome	5	229944-230027	5	CRISPRCasFinder	no		DEDDh,cas2,cas1,cas9,cas3,DinG	Orphan	CTAGATTCCCGCTTTCGCGGGAATGACGG	29	1	3	229973-229998|229973-229998|229973-229998	NC_017512.1_651150-651175|NC_017512.1_652038-652063|NC_017512.1_1332531-1332556	I-E	1	1	Orphan	DEDDh,cas2,cas1,cas9,cas3,DinG	NA,NA|67aa|down_1|NC_017512.1_236308_236509_-,NA|130aa|down_2|NC_017512.1_236517_236907_-	NA|415aa|up_9|NC_017512.1_214192_215437_+	TIGR01048, Diaminopimelate_decarboxylase, diaminopimelate decarboxylase	NA|31aa|up_8|NC_017512.1_215472_215565_-	pfam16951, MaAIMP_sms, Putative methionine and alanine importer, small subunit	NA|529aa|up_7|NC_017512.1_215561_217148_-	cd10334, SLC6sbd_u1, uncharacterized bacterial and archaeal solute carrier 6 subfamily; solute-binding domain	NA|218aa|up_6|NC_017512.1_217310_217964_-	COG3676, COG3676, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|97aa|up_5|NC_017512.1_218190_218481_+	PRK00364, groES, co-chaperonin GroES; Reviewed	NA|545aa|up_4|NC_017512.1_218573_220208_+	PRK00013, groEL, chaperonin GroEL; Reviewed	NA|811aa|up_3|NC_017512.1_220871_223304_-	TIGR01786, hemoglobin-haptoglobin-binding_protein, TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein	NA|343aa|up_2|NC_017512.1_223331_224360_-	pfam16960, HpuA, Haemoglobin-haptoglobin utilisation, porphyrin transporter	NA|506aa|up_1|NC_017512.1_225628_227146_+	pfam04575, DUF560, Protein of unknown function (DUF560)	NA|594aa|up_0|NC_017512.1_227204_228986_-	COG0147, TrpE, Anthranilate/para-aminobenzoate synthases component I [Amino acid transport and metabolism / Coenzyme metabolism]	NA|481aa|down_0|NC_017512.1_234831_236274_-	cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like	NA|67aa|down_1|NC_017512.1_236308_236509_-	NA	NA|130aa|down_2|NC_017512.1_236517_236907_-	NA	NA|306aa|down_3|NC_017512.1_237114_238032_-	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|267aa|down_4|NC_017512.1_238204_239005_+	COG1127, Ttg2A, ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|259aa|down_5|NC_017512.1_239052_239829_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|165aa|down_6|NC_017512.1_239879_240374_+	TIGR04430, OM_asym_MlaD, outer membrane lipid asymmetry maintenance protein MlaD	NA|197aa|down_7|NC_017512.1_240410_241001_+	COG2854, Ttg2D, ABC-type transport system involved in resistance to organic solvents, auxiliary component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|93aa|down_8|NC_017512.1_241051_241330_+	COG3113, COG3113, Predicted NTP binding protein (contains STAS domain) [General function prediction only]	NA|280aa|down_9|NC_017512.1_241326_242166_+	COG2853, VacJ, Surface lipoprotein [Cell envelope biogenesis, outer membrane]
GCF_000253215.1_ASM25321v1	NC_017512	Neisseria meningitidis WUE 2594, complete genome	6	272869-272978	6	CRISPRCasFinder	no		DEDDh,cas2,cas1,cas9,cas3,DinG	Orphan	TTTCTAGATTCCCGCTTTTGCGGGAATGATGGCGG	35	1	1	272904-272943	NC_017512.1_273718-273757	I-E	1	1	Orphan	DEDDh,cas2,cas1,cas9,cas3,DinG	NA|46aa|up_1|NC_017512.1_270976_271114_+,NA|68aa|down_8|NC_017512.1_285948_286152_-,NA|64aa|down_9|NC_017512.1_286171_286363_-	NA|292aa|up_9|NC_017512.1_262480_263356_+	PRK05621, PRK05621, F0F1 ATP synthase subunit gamma; Validated	NA|466aa|up_8|NC_017512.1_263393_264791_+	PRK09280, PRK09280, F0F1 ATP synthase subunit beta; Validated	NA|141aa|up_7|NC_017512.1_264801_265224_+	PRK00571, atpC, F0F1 ATP synthase subunit epsilon; Validated	NA|302aa|up_6|NC_017512.1_265547_266453_+	PRK09348, glyQ, glycyl-tRNA synthetase subunit alpha; Validated	NA|137aa|up_5|NC_017512.1_266529_266940_+	COG3171, COG3171, Uncharacterized protein conserved in bacteria [Function unknown]	NA|688aa|up_4|NC_017512.1_266960_269024_+	PRK01233, glyS, glycyl-tRNA synthetase subunit beta; Validated	NA|362aa|up_3|NC_017512.1_269040_270126_+	pfam00535, Glycos_transf_2, Glycosyl transferase family 2	NA|280aa|up_2|NC_017512.1_270125_270965_+	COG3306, COG3306, Glycosyltransferase involved in LPS biosynthesis [Cell envelope biogenesis, outer membrane]	NA|46aa|up_1|NC_017512.1_270976_271114_+	NA	NA|269aa|up_0|NC_017512.1_271113_271920_+	COG3306, COG3306, Glycosyltransferase involved in LPS biosynthesis [Cell envelope biogenesis, outer membrane]	NA|242aa|down_0|NC_017512.1_273868_274594_-	COG1385, COG1385, Uncharacterized protein conserved in bacteria [Function unknown]	NA|265aa|down_1|NC_017512.1_274802_275597_+	cd01637, IMPase_like, Inositol-monophosphatase-like domains	NA|164aa|down_2|NC_017512.1_278056_278548_+	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|249aa|down_3|NC_017512.1_279111_279858_-	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated	NA|522aa|down_4|NC_017512.1_279919_281485_-	PRK00074, guaA, GMP synthase; Reviewed	NA|309aa|down_5|NC_017512.1_283589_284516_-	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]	NA|124aa|down_6|NC_017512.1_284541_284913_-	COG3326, COG3326, Predicted membrane protein [Function unknown]	NA|321aa|down_7|NC_017512.1_284959_285922_-	PRK09352, PRK09352, beta-ketoacyl-ACP synthase 3	NA|68aa|down_8|NC_017512.1_285948_286152_-	NA	NA|64aa|down_9|NC_017512.1_286171_286363_-	NA
GCF_000253215.1_ASM25321v1	NC_017512	Neisseria meningitidis WUE 2594, complete genome	7	374160-375646	7,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas9	DEDDh,cas2,cas1,cas9,cas3,DinG	Type II-C, or Type II-C?,Type II-A,Type II-B, Type II-B	GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT,GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT,GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	36,36,36	1	1	375120-375149	NC_017512.1_25919-25948	NA:NA:NA	22,22,13	22	TypeII-C,orTypeII-C?,TypeII-A,TypeII-B,TypeII-B	DEDDh,cas2,cas1,cas9,cas3,DinG	NA,NA|52aa|down_4|NC_017512.1_384294_384450_+,NA|70aa|down_6|NC_017512.1_384719_384929_+,NA|81aa|down_7|NC_017512.1_384970_385213_-	NA|144aa|up_9|NC_017512.1_358202_358634_-	COG2510, COG2510, Predicted membrane protein [Function unknown]	NA|559aa|up_8|NC_017512.1_358808_360485_+	pfam01268, FTHFS, Formate--tetrahydrofolate ligase	NA|364aa|up_7|NC_017512.1_360599_361691_+	PRK09601, PRK09601, redox-regulated ATPase YchF	NA|623aa|up_6|NC_017512.1_362064_363933_+	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism]	NA|432aa|up_5|NC_017512.1_363994_365290_+	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated	NA|307aa|up_4|NC_017512.1_365588_366509_+	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase	NA|930aa|up_3|NC_017512.1_366650_369440_+	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed	NA|166aa|up_2|NC_017512.1_370340_370838_+	PRK00376, lspA, lipoprotein signal peptidase	NA|323aa|up_1|NC_017512.1_370866_371835_+	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed	NA|186aa|up_0|NC_017512.1_371910_372468_-	cd07533, HAD_like, uncharacterized family of the haloacid dehalogenase-like (HAD) hydrolase superfamily, similar to Parvibaculum lavamentivorans  HAD-superfamily hydrolase, subfamily IA, variant 1	cas2|109aa|down_0|NC_017512.1_375709_376036_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|305aa|down_1|NC_017512.1_376028_376943_-	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas9|1083aa|down_2|NC_017512.1_377009_380258_-	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	NA|1145aa|down_3|NC_017512.1_380535_383970_-	PRK05673, dnaE, DNA polymerase III subunit alpha; Validated	NA|52aa|down_4|NC_017512.1_384294_384450_+	NA	NA|105aa|down_5|NC_017512.1_384427_384742_+	COG2501, COG2501, S4-like RNA binding protein [Replication, recombination, and repair]	NA|70aa|down_6|NC_017512.1_384719_384929_+	NA	NA|81aa|down_7|NC_017512.1_384970_385213_-	NA	NA|279aa|down_8|NC_017512.1_385221_386058_+	COG0613, COG0613, Predicted metal-dependent phosphoesterases (PHP family) [General function prediction only]	NA|431aa|down_9|NC_017512.1_386109_387402_-	COG3977, COG3977, Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
GCF_000253215.1_ASM25321v1	NC_017512	Neisseria meningitidis WUE 2594, complete genome	8	398385-398609	8	CRISPRCasFinder	no		DEDDh,cas2,cas1,cas9,cas3,DinG	Orphan	CCGTCATTCCCGCGCAGGCGGGAATC	26	1	8	398534-398583|398534-398583|398534-398583|398534-398583|398534-398583|398534-398583|398534-398583|398534-398583	NC_017512.1_196581-196532|NC_017512.1_225153-225202|NC_017512.1_500514-500465|NC_017512.1_834226-834177|NC_017512.1_1332329-1332378|NC_017512.1_1748893-1748844|NC_017512.1_1750108-1750059|NC_017512.1_1801463-1801414	I-E	3	3	Orphan	DEDDh,cas2,cas1,cas9,cas3,DinG	NA,NA	NA|279aa|up_9|NC_017512.1_385221_386058_+	COG0613, COG0613, Predicted metal-dependent phosphoesterases (PHP family) [General function prediction only]	NA|431aa|up_8|NC_017512.1_386109_387402_-	COG3977, COG3977, Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]	NA|637aa|up_7|NC_017512.1_387459_389370_-	COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]	NA|392aa|up_6|NC_017512.1_389417_390593_-	COG0399, WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]	NA|414aa|up_5|NC_017512.1_390722_391964_-	pfam02397, Bac_transf, Bacterial sugar transferase	NA|357aa|up_4|NC_017512.1_393141_394212_-	cd03819, GT4_WavL-like, Vibrio cholerae WavL and similar sequences	NA|474aa|up_3|NC_017512.1_394208_395630_-	COG2244, RfbX, Membrane protein involved in the export of O-antigen and teichoic acid [General function prediction only]	NA|370aa|up_2|NC_017512.1_395824_396934_-	TIGR00326, eubact_ribD, riboflavin biosynthesis protein RibD	NA|155aa|up_1|NC_017512.1_396965_397430_-	COG1327, COG1327, Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains [Transcription]	NA|281aa|up_0|NC_017512.1_397458_398301_-	pfam13230, GATase_4, Glutamine amidotransferases class-II	NA|360aa|down_0|NC_017512.1_398944_400024_-	PRK00002, aroB, 3-dehydroquinate synthase; Reviewed	NA|171aa|down_1|NC_017512.1_400103_400616_-	PRK00131, aroK, shikimate kinase; Reviewed	NA|762aa|down_2|NC_017512.1_401793_404079_-	COG4796, HofQ, Type II secretory pathway, component HofQ [Intracellular trafficking and secretion]	NA|182aa|down_3|NC_017512.1_404097_404643_-	COG3168, PilP, Tfp pilus assembly protein PilP [Cell motility and secretion / Intracellular trafficking and secretion]	NA|216aa|down_4|NC_017512.1_404660_405308_-	COG3167, PilO, Tfp pilus assembly protein PilO [Cell motility and secretion / Intracellular trafficking and secretion]	NA|200aa|down_5|NC_017512.1_405308_405908_-	COG3166, PilN, Tfp pilus assembly protein PilN [Cell motility and secretion / Intracellular trafficking and secretion]	NA|372aa|down_6|NC_017512.1_405910_407026_-	COG4972, PilM, Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion]	NA|799aa|down_7|NC_017512.1_407177_409574_+	COG5009, MrcA, Membrane carboxypeptidase/penicillin-binding protein [Cell envelope biogenesis, outer membrane]	NA|210aa|down_8|NC_017512.1_409694_410324_-	PRK00454, engB, GTP-binding protein YsxC; Reviewed	NA|208aa|down_9|NC_017512.1_410529_411153_+	COG2863, COG2863, Cytochrome c553 [Energy production and conversion]
GCF_000253215.1_ASM25321v1	NC_017512	Neisseria meningitidis WUE 2594, complete genome	9	710301-710441	9	CRISPRCasFinder	no		DEDDh,cas2,cas1,cas9,cas3,DinG	Orphan	AAGGCGAGGCAACGCTGTACTGGTTTTTGTTAATCCACTATA	42	1	164	710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399|710343-710399	NC_017512.1_8918-8974|NC_017512.1_16393-16337|NC_017512.1_50739-50683|NC_017512.1_97231-97175|NC_017512.1_105573-105629|NC_017512.1_133563-133619|NC_017512.1_136167-136111|NC_017512.1_193476-193532|NC_017512.1_197630-197574|NC_017512.1_207158-207102|NC_017512.1_208510-208454|NC_017512.1_229455-229399|NC_017512.1_230200-230144|NC_017512.1_244703-244759|NC_017512.1_288799-288743|NC_017512.1_331387-331331|NC_017512.1_335164-335220|NC_017512.1_373329-373385|NC_017512.1_418307-418363|NC_017512.1_421520-421464|NC_017512.1_429752-429808|NC_017512.1_473436-473380|NC_017512.1_488441-488385|NC_017512.1_500245-500301|NC_017512.1_500819-500875|NC_017512.1_562580-562524|NC_017512.1_574391-574447|NC_017512.1_575628-575684|NC_017512.1_603324-603380|NC_017512.1_611145-611201|NC_017512.1_633327-633271|NC_017512.1_634483-634539|NC_017512.1_662866-662810|NC_017512.1_667496-667552|NC_017512.1_680511-680567|NC_017512.1_681366-681310|NC_017512.1_691950-692006|NC_017512.1_732440-732496|NC_017512.1_787440-787384|NC_017512.1_797161-797217|NC_017512.1_828351-828407|NC_017512.1_828620-828676|NC_017512.1_834697-834753|NC_017512.1_856689-856633|NC_017512.1_904858-904802|NC_017512.1_923491-923547|NC_017512.1_954479-954423|NC_017512.1_963876-963932|NC_017512.1_972678-972622|NC_017512.1_972933-972877|NC_017512.1_986941-986885|NC_017512.1_1047634-1047690|NC_017512.1_1088820-1088876|NC_017512.1_1102574-1102630|NC_017512.1_1105702-1105646|NC_017512.1_1146930-1146874|NC_017512.1_1234597-1234653|NC_017512.1_1243922-1243866|NC_017512.1_1244318-1244262|NC_017512.1_1263471-1263415|NC_017512.1_1284494-1284550|NC_017512.1_1291827-1291883|NC_017512.1_1319800-1319856|NC_017512.1_1332225-1332169|NC_017512.1_1335647-1335703|NC_017512.1_1377238-1377182|NC_017512.1_1386548-1386604|NC_017512.1_1391563-1391507|NC_017512.1_1398520-1398464|NC_017512.1_1402011-1402067|NC_017512.1_1403198-1403254|NC_017512.1_1406754-1406698|NC_017512.1_1416912-1416856|NC_017512.1_1417485-1417541|NC_017512.1_1458653-1458709|NC_017512.1_1494484-1494540|NC_017512.1_1521828-1521772|NC_017512.1_1662692-1662748|NC_017512.1_1666095-1666151|NC_017512.1_1706483-1706539|NC_017512.1_1726362-1726418|NC_017512.1_1738130-1738074|NC_017512.1_1742738-1742682|NC_017512.1_1747392-1747336|NC_017512.1_1748624-1748680|NC_017512.1_1749531-1749587|NC_017512.1_1760533-1760477|NC_017512.1_1780371-1780315|NC_017512.1_1801194-1801250|NC_017512.1_1813223-1813279|NC_017512.1_1815851-1815795|NC_017512.1_1848375-1848431|NC_017512.1_1922738-1922794|NC_017512.1_1936696-1936752|NC_017512.1_1946928-1946984|NC_017512.1_1961935-1961991|NC_017512.1_1976947-1977003|NC_017512.1_2029823-2029879|NC_017512.1_2046197-2046253|NC_017512.1_2047934-2047990|NC_017512.1_2068739-2068795|NC_017512.1_2071043-2071099|NC_017512.1_2150518-2150574|NC_017512.1_2155554-2155610|NC_017512.1_2156258-2156314|NC_017512.1_2204160-2204216|NC_017512.1_2206268-2206324|NC_017512.1_72269-72213|NC_017512.1_129762-129818|NC_017512.1_134252-134308|NC_017512.1_146175-146231|NC_017512.1_192726-192782|NC_017512.1_193082-193138|NC_017512.1_224557-224501|NC_017512.1_225422-225366|NC_017512.1_252009-252065|NC_017512.1_265345-265401|NC_017512.1_276201-276257|NC_017512.1_297113-297057|NC_017512.1_311585-311641|NC_017512.1_507139-507083|NC_017512.1_572537-572481|NC_017512.1_581678-581734|NC_017512.1_583503-583447|NC_017512.1_620576-620632|NC_017512.1_651570-651514|NC_017512.1_761312-761368|NC_017512.1_799740-799684|NC_017512.1_801100-801044|NC_017512.1_824763-824819|NC_017512.1_840838-840782|NC_017512.1_843231-843175|NC_017512.1_902625-902569|NC_017512.1_912660-912604|NC_017512.1_959359-959303|NC_017512.1_1045339-1045283|NC_017512.1_1128210-1128154|NC_017512.1_1160052-1160108|NC_017512.1_1178071-1178127|NC_017512.1_1188746-1188690|NC_017512.1_1256785-1256729|NC_017512.1_1298418-1298362|NC_017512.1_1322503-1322447|NC_017512.1_1465093-1465037|NC_017512.1_1633044-1632988|NC_017512.1_1661132-1661076|NC_017512.1_1667111-1667167|NC_017512.1_1667962-1668018|NC_017512.1_1674187-1674131|NC_017512.1_1808363-1808419|NC_017512.1_1819832-1819776|NC_017512.1_2028447-2028503|NC_017512.1_2065301-2065357|NC_017512.1_44098-44042|NC_017512.1_95732-95676|NC_017512.1_234660-234604|NC_017512.1_624931-624875|NC_017512.1_833957-834013|NC_017512.1_1213210-1213154|NC_017512.1_1327953-1328009|NC_017512.1_1330009-1330065|NC_017512.1_1332699-1332643|NC_017512.1_1657568-1657512|NC_017512.1_1804723-1804779	NA	1	1	Orphan	DEDDh,cas2,cas1,cas9,cas3,DinG	NA|99aa|up_3|NC_017512.1_707018_707315_-,NA|202aa|up_1|NC_017512.1_708299_708905_+,NA	NA|67aa|up_9|NC_017512.1_700909_701110_+	COG2906, Bfd, Bacterioferritin-associated ferredoxin [Inorganic ion transport and metabolism]	NA|78aa|up_8|NC_017512.1_701275_701509_+	pfam05768, DUF836, Glutaredoxin-like domain (DUF836)	NA|288aa|up_7|NC_017512.1_701982_702846_-	TIGR01214, dTDP-4-keto-L-rhamnose_reductase, dTDP-4-dehydrorhamnose reductase	NA|288aa|up_6|NC_017512.1_703043_703907_+	PRK13961, PRK13961, phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional	NA|708aa|up_5|NC_017512.1_704140_706264_+	PRK11824, PRK11824, polynucleotide phosphorylase/polyadenylase; Provisional	NA|223aa|up_4|NC_017512.1_706336_707005_-	COG2836, COG2836, Uncharacterized conserved protein [Function unknown]	NA|99aa|up_3|NC_017512.1_707018_707315_-	NA	NA|284aa|up_2|NC_017512.1_707451_708303_+	PRK00450, dapF, diaminopimelate epimerase; Provisional	NA|202aa|up_1|NC_017512.1_708299_708905_+	NA	NA|311aa|up_0|NC_017512.1_709098_710031_+	TIGR01139, Cysteine_synthase, cysteine synthase A	NA|300aa|down_0|NC_017512.1_710596_711496_+	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|340aa|down_1|NC_017512.1_711760_712780_-	PRK10861, PRK10861, signal peptidase I	NA|598aa|down_2|NC_017512.1_712922_714716_-	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|234aa|down_3|NC_017512.1_714860_715562_-	PRK05584, PRK05584, 5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA|377aa|down_4|NC_017512.1_715729_716860_+	COG5008, PilU, Tfp pilus assembly protein, ATPase PilU [Cell motility and secretion / Intracellular trafficking and secretion]	NA|326aa|down_5|NC_017512.1_716893_717871_+	PRK08699, PRK08699, DNA polymerase III subunit delta'; Validated	NA|117aa|down_6|NC_017512.1_717874_718225_+	COG3215, PilZ, Tfp pilus assembly protein PilZ [Cell motility and secretion / Intracellular trafficking and secretion]	NA|260aa|down_7|NC_017512.1_718229_719009_+	COG0084, TatD, Mg-dependent DNase [DNA replication, recombination, and repair]	NA|72aa|down_8|NC_017512.1_719034_719250_+	COG3042, Hlx, Putative hemolysin [General function prediction only]	NA|104aa|down_9|NC_017512.1_719350_719662_+	TIGR00365, TIGR00365, monothiol glutaredoxin, Grx4 family
GCF_000253215.1_ASM25321v1	NC_017512	Neisseria meningitidis WUE 2594, complete genome	10	1256441-1256542	10	CRISPRCasFinder	no		DEDDh,cas2,cas1,cas9,cas3,DinG	Orphan	TCGTCATTCCCGCGCAGGCGGGAATCC	27	0	0	NA	NA	I-E	1	1	Orphan	DEDDh,cas2,cas1,cas9,cas3,DinG	NA,NA|167aa|down_7|NC_017512.1_1264541_1265042_-	NA|448aa|up_9|NC_017512.1_1244998_1246342_-	cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like	NA|218aa|up_8|NC_017512.1_1246346_1247000_-	COG2095, MarC, Multiple antibiotic transporter [Intracellular trafficking and secretion]	NA|97aa|up_7|NC_017512.1_1247150_1247441_+	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA|482aa|up_6|NC_017512.1_1247503_1248949_+	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA|311aa|up_5|NC_017512.1_1248945_1249878_+	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown]	NA|477aa|up_4|NC_017512.1_1249920_1251351_+	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA|337aa|up_3|NC_017512.1_1251442_1252453_+	PRK07609, PRK07609, CDP-6-deoxy-delta-3,4-glucoseen reductase; Validated	NA|211aa|up_2|NC_017512.1_1252582_1253215_-	COG0259, PdxH, Pyridoxamine-phosphate oxidase [Coenzyme metabolism]	NA|350aa|up_1|NC_017512.1_1253436_1254486_+	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis]	NA|514aa|up_0|NC_017512.1_1254554_1256096_-	cd17353, MFS_OFA_like, Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of transporters	NA|452aa|down_0|NC_017512.1_1256990_1258346_-	PRK00286, xseA, exodeoxyribonuclease VII large subunit; Reviewed	NA|274aa|down_1|NC_017512.1_1258542_1259364_+	cd00553, NAD_synthase, NAD+ synthase is a homodimer, which catalyzes the final step in de novo nicotinamide adenine dinucleotide (NAD+) biosynthesis, an amide transfer from either ammonia or glutamine to nicotinic acid adenine dinucleotide (NaAD)	NA|158aa|down_2|NC_017512.1_1259433_1259907_-	COG2846, COG2846, Regulator of cell morphogenesis and NO signaling [Cell division and chromosome partitioning]	NA|111aa|down_3|NC_017512.1_1260209_1260542_+	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin	NA|316aa|down_4|NC_017512.1_1260594_1261542_-	PRK11783, rlmL, bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA|463aa|down_5|NC_017512.1_1261869_1263258_+	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis]	NA|185aa|down_6|NC_017512.1_1263902_1264457_-	pfam08139, LPAM_1, Prokaryotic membrane lipoprotein lipid attachment site	NA|167aa|down_7|NC_017512.1_1264541_1265042_-	NA	NA|398aa|down_8|NC_017512.1_1265445_1266639_+	PRK05093, argD, acetylornithine/succinyldiaminopimelate transaminase	NA|415aa|down_9|NC_017512.1_1266703_1267948_-	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX
GCF_000253215.1_ASM25321v1	NC_017512	Neisseria meningitidis WUE 2594, complete genome	11	1511118-1511227	11	CRISPRCasFinder	no		DEDDh,cas2,cas1,cas9,cas3,DinG	Orphan	TTGCGTAGGGTGGGCTTCAGCCCACC	26	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas2,cas1,cas9,cas3,DinG	NA|244aa|up_2|NC_017512.1_1507238_1507970_+,NA|343aa|up_0|NC_017512.1_1510061_1511090_+,NA|254aa|down_8|NC_017512.1_1521970_1522732_-,NA|84aa|down_9|NC_017512.1_1522831_1523083_+	NA|188aa|up_9|NC_017512.1_1498834_1499398_-	PRK10832, PRK10832, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA|112aa|up_8|NC_017512.1_1500208_1500544_-	COG0599, COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit [Function unknown]	NA|302aa|up_7|NC_017512.1_1500672_1501578_+	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|163aa|up_6|NC_017512.1_1501639_1502128_-	pfam08139, LPAM_1, Prokaryotic membrane lipoprotein lipid attachment site	NA|301aa|up_5|NC_017512.1_1502274_1503177_+	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|377aa|up_4|NC_017512.1_1503217_1504348_-	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|875aa|up_3|NC_017512.1_1504552_1507177_+	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed	NA|244aa|up_2|NC_017512.1_1507238_1507970_+	NA	NA|420aa|up_1|NC_017512.1_1508678_1509938_+	COG1002, COG1002, Type II restriction enzyme, methylase subunits [Defense mechanisms]	NA|343aa|up_0|NC_017512.1_1510061_1511090_+	NA	NA|322aa|down_0|NC_017512.1_1511692_1512658_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|228aa|down_1|NC_017512.1_1512974_1513658_-	PRK14118, gpmA, 2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA|768aa|down_2|NC_017512.1_1513953_1516257_+	PRK05561, PRK05561, DNA topoisomerase 4 subunit A	NA|506aa|down_3|NC_017512.1_1516276_1517794_+	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS	NA|156aa|down_4|NC_017512.1_1517845_1518313_+	cd19926, REC_PilR, phosphoacceptor receiver (REC) domain of type 4 fimbriae expression regulatory protein PilR and similar proteins	NA|251aa|down_5|NC_017512.1_1518416_1519169_+	pfam04445, SAM_MT, Putative SAM-dependent methyltransferase	NA|69aa|down_6|NC_017512.1_1520202_1520409_-	pfam10981, DUF2788, Protein of unknown function (DUF2788)	NA|390aa|down_7|NC_017512.1_1520503_1521673_-	TIGR01325, O_suc_HS_sulf, O-succinylhomoserine sulfhydrylase	NA|254aa|down_8|NC_017512.1_1521970_1522732_-	NA	NA|84aa|down_9|NC_017512.1_1522831_1523083_+	NA
GCF_000253215.1_ASM25321v1	NC_017512	Neisseria meningitidis WUE 2594, complete genome	12	2062419-2062517	12	CRISPRCasFinder	no		DEDDh,cas2,cas1,cas9,cas3,DinG	Orphan	GGATTCCCGCCTGCGCGGGAATGACG	26	1	1	2062445-2062491	NC_017512.1_1527438-1527392	I-E	1	1	Orphan	DEDDh,cas2,cas1,cas9,cas3,DinG	NA|137aa|up_3|NC_017512.1_2055764_2056175_-,NA	NA|280aa|up_9|NC_017512.1_2050783_2051623_+	COG2878, COG2878, Predicted NADH:ubiquinone oxidoreductase, subunit RnfB [Energy production and conversion]	NA|344aa|up_8|NC_017512.1_2051823_2052855_+	COG0057, GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism]	NA|242aa|up_7|NC_017512.1_2053006_2053732_-	COG2360, Aat, Leu/Phe-tRNA-protein transferase [Posttranslational modification, protein turnover, chaperones]	NA|145aa|up_6|NC_017512.1_2053801_2054236_-	PRK09462, fur, ferric uptake regulator; Provisional	NA|126aa|up_5|NC_017512.1_2054454_2054832_+	COG2913, OlmA, Outer membrane lipoprotein OmlA (small protein A) [Cell envelope biogenesis, outer membrane]	NA|270aa|up_4|NC_017512.1_2054841_2055651_+	PRK00048, PRK00048, dihydrodipicolinate reductase; Provisional	NA|137aa|up_3|NC_017512.1_2055764_2056175_-	NA	NA|385aa|up_2|NC_017512.1_2056430_2057585_-	COG0763, LpxB, Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]	NA|331aa|up_1|NC_017512.1_2057650_2058643_-	PRK11025, PRK11025, 23S rRNA pseudouridine(955/2504/2580) synthase RluC	NA|920aa|up_0|NC_017512.1_2059136_2061896_+	PRK10811, rne, ribonuclease E; Reviewed	NA|330aa|down_0|NC_017512.1_2062532_2063522_-	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed	NA|476aa|down_1|NC_017512.1_2063681_2065109_+	COG1115, AlsT, Na+/alanine symporter [Amino acid transport and metabolism]	NA|632aa|down_2|NC_017512.1_2065433_2067329_+	PRK05192, PRK05192, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA|195aa|down_3|NC_017512.1_2067397_2067982_+	cd07182, RNase_HII_bacteria_HII_like, Bacterial Ribonuclease HII-like	NA|258aa|down_4|NC_017512.1_2068928_2069702_-	pfam13614, AAA_31, AAA domain	NA|208aa|down_5|NC_017512.1_2069800_2070424_-	PRK00107, gidB, 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA|376aa|down_6|NC_017512.1_2071362_2072490_+	COG1289, COG1289, Predicted membrane protein [Function unknown]	NA|186aa|down_7|NC_017512.1_2072670_2073228_+	PRK00083, frr, ribosome recycling factor; Reviewed	NA|249aa|down_8|NC_017512.1_2073283_2074030_+	pfam01255, Prenyltransf, Putative undecaprenyl diphosphate synthase	NA|266aa|down_9|NC_017512.1_2074032_2074830_+	pfam01148, CTP_transf_1, Cytidylyltransferase family
GCF_000253215.1_ASM25321v1	NC_017512	Neisseria meningitidis WUE 2594, complete genome	13	2210019-2210124	13	CRISPRCasFinder	no		DEDDh,cas2,cas1,cas9,cas3,DinG	Orphan	CGAAGGCAAATGCGGCGAGGGCAAATGCGGT	31	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas2,cas1,cas9,cas3,DinG	NA|136aa|up_9|NC_017512.1_2195350_2195758_-,NA|147aa|down_4|NC_017512.1_2212876_2213317_+	NA|136aa|up_9|NC_017512.1_2195350_2195758_-	NA	NA|229aa|up_8|NC_017512.1_2195757_2196444_-	cd06824, PLPDE_III_Yggs_like, Pyridoxal 5-phosphate (PLP)-binding TIM barrel domain of Type III PLP-Dependent Enzymes, Yggs-like proteins	NA|348aa|up_7|NC_017512.1_2196563_2197607_+	COG2805, PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion]	NA|409aa|up_6|NC_017512.1_2197769_2198996_+	COG5008, PilU, Tfp pilus assembly protein, ATPase PilU [Cell motility and secretion / Intracellular trafficking and secretion]	NA|717aa|up_5|NC_017512.1_2199113_2201264_+	TIGR01666, Uncharacterized_protein_HI_1680, TIGR01666 family membrane protein	NA|336aa|up_4|NC_017512.1_2203022_2204030_-	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair]	NA|486aa|up_3|NC_017512.1_2204506_2205964_+	TIGR00924, putative_Di/Tri_peptide_transporter, amino acid/peptide transporter (Peptide:H+ symporter), bacterial	NA|368aa|up_2|NC_017512.1_2206875_2207979_-	PRK00578, prfB, peptide chain release factor 2; Validated	NA|298aa|up_1|NC_017512.1_2208081_2208975_-	COG1752, RssA, Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]	NA|150aa|up_0|NC_017512.1_2209316_2209766_+	COG2259, COG2259, Predicted membrane protein [Function unknown]	NA|281aa|down_0|NC_017512.1_2210263_2211106_+	COG3220, COG3220, Uncharacterized protein conserved in bacteria [Function unknown]	NA|249aa|down_1|NC_017512.1_2211095_2211842_+	COG3219, COG3219, Uncharacterized protein conserved in bacteria [Function unknown]	NA|196aa|down_2|NC_017512.1_2211863_2212451_+	PRK12532, PRK12532, RNA polymerase sigma factor; Provisional	NA|60aa|down_3|NC_017512.1_2212456_2212636_+	pfam13490, zf-HC2, Putative zinc-finger	NA|147aa|down_4|NC_017512.1_2212876_2213317_+	NA	NA|201aa|down_5|NC_017512.1_2215491_2216094_-	COG0009, SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis]	NA|424aa|down_6|NC_017512.1_2216127_2217399_-	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional	NA|106aa|down_7|NC_017512.1_2217555_2217873_+	pfam14131, DUF4298, Domain of unknown function (DUF4298)	NA|204aa|down_8|NC_017512.1_2217924_2218536_-	COG1739, COG1739, Uncharacterized conserved protein [Function unknown]	NA|312aa|down_9|NC_017512.1_2218598_2219534_-	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]
