assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000252995.1_ASM25299v1	NC_015761	Salmonella bongori NCTC 12419, complete genome	1	2791744-2792992	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	DEDDh,DinG,cas14j,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29	1	1	2792871-2792902	NC_015761.1_2786872-2786903	I-E:I-E:I-E	20,20,19	20	TypeI-E	DEDDh,DinG,cas14j,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA	NA|254aa|up_9|NC_015761.1_2783475_2784237_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_8|NC_015761.1_2784217_2785267_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_7|NC_015761.1_2785263_2785743_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_6|NC_015761.1_2785742_2786453_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_5|NC_015761.1_2786471_2786783_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|108aa|up_4|NC_015761.1_2786973_2787297_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_3|NC_015761.1_2787347_2787953_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|480aa|up_2|NC_015761.1_2787939_2789379_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_1|NC_015761.1_2789388_2790297_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|351aa|up_0|NC_015761.1_2790549_2791602_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	cas2|98aa|down_0|NC_015761.1_2793088_2793382_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|307aa|down_1|NC_015761.1_2793381_2794302_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|217aa|down_2|NC_015761.1_2794298_2794949_-	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	cas5|249aa|down_3|NC_015761.1_2794930_2795677_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|352aa|down_4|NC_015761.1_2795687_2796743_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|185aa|down_5|NC_015761.1_2796756_2797311_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|519aa|down_6|NC_015761.1_2797307_2798864_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|888aa|down_7|NC_015761.1_2798875_2801539_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|318aa|down_8|NC_015761.1_2801975_2802929_+	PRK15379, PRK15379, type III secretion system effector SopD	NA|245aa|down_9|NC_015761.1_2803019_2803754_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase
GCF_000252995.1_ASM25299v1	NC_015761	Salmonella bongori NCTC 12419, complete genome	2	2808974-2810039	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	DEDDh,DinG,cas14j,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	17,17,17	17	TypeI-E	DEDDh,DinG,cas14j,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA	cas5|249aa|up_9|NC_015761.1_2794930_2795677_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|352aa|up_8|NC_015761.1_2795687_2796743_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|185aa|up_7|NC_015761.1_2796756_2797311_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|519aa|up_6|NC_015761.1_2797307_2798864_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|888aa|up_5|NC_015761.1_2798875_2801539_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|318aa|up_4|NC_015761.1_2801975_2802929_+	PRK15379, PRK15379, type III secretion system effector SopD	NA|245aa|up_3|NC_015761.1_2803019_2803754_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|571aa|up_2|NC_015761.1_2803837_2805550_-	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|600aa|up_1|NC_015761.1_2805549_2807349_-	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|121aa|up_0|NC_015761.1_2807655_2808018_+	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|224aa|down_0|NC_015761.1_2810329_2811001_-	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|433aa|down_1|NC_015761.1_2811505_2812804_-	PRK00077, eno, enolase; Provisional	NA|546aa|down_2|NC_015761.1_2812886_2814524_-	PRK05380, pyrG, CTP synthetase; Validated	NA|264aa|down_3|NC_015761.1_2814751_2815543_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|745aa|down_4|NC_015761.1_2815660_2817895_-	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|432aa|down_5|NC_015761.1_2817946_2819242_-	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|381aa|down_6|NC_015761.1_2822186_2823329_-	pfam02595, Gly_kinase, Glycerate kinase family	NA|447aa|down_7|NC_015761.1_2823407_2824748_-	TIGR03247, glucar-dehydr, glucarate dehydratase	NA|447aa|down_8|NC_015761.1_2824768_2826109_-	TIGR03247, glucar-dehydr, glucarate dehydratase	NA|451aa|down_9|NC_015761.1_2826111_2827464_-	TIGR00893, Probable_glucarate_transporter, D-galactonate transporter
