The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_016011	Listeria ivanovii subsp. ivanovii PAM 55, complete genome	2928879	117610	120795	2928879	holin	Listeria_phage(50.0%)	6	NA	NA
WP_014091672.1|117610_118063_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A059T7S0	Listeria_phage	49.3	4.7e-32
WP_014091673.1|118068_118404_-	helix-turn-helix transcriptional regulator	NA	A0A2H4JAR9	uncultured_Caudovirales_phage	51.5	3.1e-20
WP_014091674.1|118627_119056_+	hypothetical protein	NA	A8ATZ8	Listeria_phage	45.9	2.3e-12
WP_014091675.1|119067_119487_+	hypothetical protein	NA	A8ASQ1	Listeria_phage	38.6	5.5e-19
WP_014091676.1|119663_120086_+|holin	holin family protein	holin	Q2I8E7	Bacillus_phage	45.6	5.6e-27
WP_077905816.1|120117_120795_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A0N9SGH1	Paenibacillus_phage	41.5	1.2e-26
>prophage 2
NC_016011	Listeria ivanovii subsp. ivanovii PAM 55, complete genome	2928879	1269300	1324838	2928879	tRNA,protease	Bacillus_virus(17.65%)	55	NA	NA
WP_014092665.1|1269300_1270440_-|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_014092666.1|1270521_1270917_-	helix-turn-helix transcriptional regulator	NA	A9D9J6	Lactobacillus_prophage	55.9	3.0e-14
WP_014092667.1|1271067_1271283_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_025279905.1|1271436_1271970_+|protease	matrixin family metalloprotease	protease	NA	NA	NA	NA
WP_014092669.1|1271984_1272653_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014092670.1|1273075_1274014_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014092671.1|1274129_1275413_+	trigger factor	NA	NA	NA	NA	NA
WP_003719537.1|1275599_1276859_+|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	63.2	1.0e-145
WP_014092672.1|1276976_1277543_+	type I signal peptidase SipX	NA	NA	NA	NA	NA
WP_014092673.1|1277577_1278147_+	type I signal peptidase SipY	NA	NA	NA	NA	NA
WP_014092674.1|1278249_1278792_+	type I signal peptidase SipZ	NA	NA	NA	NA	NA
WP_025279906.1|1278801_1279665_+	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA	NA
WP_014092675.1|1279661_1280447_+	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	42.3	3.8e-29
WP_014092676.1|1280580_1281441_+	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_014092677.1|1281710_1283789_+	type I DNA topoisomerase	NA	A0A1V0SB35	Catovirus	37.2	6.0e-106
WP_014092678.1|1283853_1285158_+|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	tRNA	NA	NA	NA	NA
WP_014092679.1|1285443_1286346_+	tyrosine recombinase XerC	NA	A0A2H4PCY2	Mycobacterium_phage	28.1	2.0e-13
WP_014092680.1|1286366_1286906_+|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_014092681.1|1286919_1288329_+|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A191ZC11	Erwinia_phage	28.2	4.9e-43
WP_014092682.1|1288349_1289129_+	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA	NA
WP_014092683.1|1289227_1289647_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_014092684.1|1289668_1289989_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014092685.1|1289981_1290854_+	aldose 1-epimerase family protein	NA	NA	NA	NA	NA
WP_025279907.1|1290896_1291493_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_025279908.1|1291650_1292058_+	CoA-binding protein	NA	NA	NA	NA	NA
WP_014092686.1|1292237_1294205_+	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	42.2	9.6e-122
WP_014092687.1|1294201_1296661_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	32.3	1.5e-100
WP_014092688.1|1296742_1297210_+	S-ribosylhomocysteine lyase	NA	NA	NA	NA	NA
WP_014092689.1|1297339_1299199_-	acetyltransferase	NA	B5WZU0	Pseudomonas_phage	31.9	2.2e-43
WP_014092690.1|1299408_1300116_+	glycerophosphodiester phosphodiesterase	NA	A0A0S2MYI4	Enterococcus_phage	38.7	3.2e-11
WP_014092691.1|1300337_1302014_+	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA	NA
WP_014092692.1|1302139_1303057_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_003719566.1|1303171_1303405_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_095075141.1|1303511_1304756_+	GTPase HflX	NA	NA	NA	NA	NA
WP_014092693.1|1304727_1305954_+	methionine gamma-lyase family protein	NA	NA	NA	NA	NA
WP_003719570.1|1306156_1306525_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014092694.1|1306595_1307930_+	type I glutamate--ammonia ligase	NA	A0A1V0SJ53	Klosneuvirus	25.8	3.5e-06
WP_014092695.1|1308123_1309419_+	arsenic transporter	NA	A0A2H4PQU3	Staphylococcus_phage	62.6	2.2e-146
WP_014092696.1|1309457_1309979_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_014092697.1|1310008_1310623_-	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	62.1	9.3e-15
WP_014092698.1|1310777_1311107_+	cell division suppressor protein YneA	NA	NA	NA	NA	NA
WP_014092699.1|1311204_1311432_+	DUF896 domain-containing protein	NA	NA	NA	NA	NA
WP_014092700.1|1311578_1313573_+	transketolase	NA	NA	NA	NA	NA
WP_003723442.1|1313794_1314034_+	YneF family protein	NA	NA	NA	NA	NA
WP_014092701.1|1314092_1314896_-	DUF2785 domain-containing protein	NA	NA	NA	NA	NA
WP_014092702.1|1315662_1316169_-	ParB-like nuclease domain-containing protein	NA	A0A220GKT8	Streptococcus_phage	63.0	2.1e-52
WP_014092703.1|1316178_1317483_-	DUF3440 domain-containing protein	NA	A0A220GKF8	Streptococcus_phage	50.5	3.2e-129
WP_014092704.1|1317472_1318672_-	DEAD/DEAH box helicase	NA	L0P6E9	Lactobacillus_phage	46.1	1.1e-88
WP_014092705.1|1318655_1319030_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003723449.1|1319331_1320060_+	UMP kinase	NA	NA	NA	NA	NA
WP_014092706.1|1320059_1320617_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_014092707.1|1320844_1321603_+	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	42.6	1.1e-22
WP_014092708.1|1321616_1322405_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_014092709.1|1322419_1323562_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_025279914.1|1323575_1324838_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
>prophage 3
NC_016011	Listeria ivanovii subsp. ivanovii PAM 55, complete genome	2928879	1847615	1855926	2928879		Synechococcus_phage(33.33%)	8	NA	NA
WP_014093121.1|1847615_1848209_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	38.6	5.4e-28
WP_014093122.1|1848205_1849255_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	44.4	6.4e-64
WP_014093123.1|1849270_1850698_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	34.2	3.1e-53
WP_014093124.1|1850682_1852902_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	41.1	1.2e-157
WP_014093125.1|1852894_1853578_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_014093126.1|1853581_1853827_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_014093127.1|1853838_1854552_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A1D8KNF0	Synechococcus_phage	38.3	2.0e-40
WP_014093128.1|1854633_1855926_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.6	5.5e-17
>prophage 4
NC_016011	Listeria ivanovii subsp. ivanovii PAM 55, complete genome	2928879	2013548	2021537	2928879		Faustovirus(14.29%)	10	NA	NA
WP_014093266.1|2013548_2014634_-	histidinol-phosphate transaminase	NA	A0A1X7BZP2	Faustovirus	25.7	5.5e-18
WP_014093267.1|2014633_2015008_-	chorismate mutase	NA	NA	NA	NA	NA
WP_014093268.1|2015004_2016102_-	3-dehydroquinate synthase	NA	E5ERI4	Ostreococcus_lucimarinus_virus	29.3	4.4e-23
WP_014093269.1|2016104_2017271_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	39.2	5.4e-48
WP_014093270.1|2017476_2017920_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	45.8	6.9e-28
WP_014093271.1|2017939_2018905_-	heptaprenyl diphosphate synthase component II	NA	A0A1V0SE37	Indivirus	20.9	1.1e-06
WP_014093272.1|2018915_2019629_-	demethylmenaquinone methyltransferase	NA	NA	NA	NA	NA
WP_014093273.1|2019651_2020419_-	heptaprenyl diphosphate synthase component 1	NA	NA	NA	NA	NA
WP_014093274.1|2020477_2021047_-	GTP cyclohydrolase I FolE	NA	E7DN69	Pneumococcus_phage	47.2	1.2e-40
WP_003720260.1|2021261_2021537_-	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	69.7	2.0e-25
>prophage 5
NC_016011	Listeria ivanovii subsp. ivanovii PAM 55, complete genome	2928879	2523714	2531573	2928879		Streptococcus_phage(50.0%)	7	NA	NA
WP_014093686.1|2523714_2524686_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	39.4	1.2e-51
WP_014093687.1|2524693_2525662_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	42.7	9.7e-67
WP_014093688.1|2525663_2526539_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	28.8	4.1e-08
WP_014093689.1|2526647_2528378_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	52.6	2.0e-171
WP_014093690.1|2528423_2529494_-	galactose mutarotase	NA	NA	NA	NA	NA
WP_014093691.1|2529512_2530496_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	37.2	2.0e-51
WP_014093692.1|2530613_2531573_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	54.1	7.5e-88
