assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000251085.2_ASM25108v2	NC_017769	Streptococcus pneumoniae ST556, complete sequence	1	1120403-1120506	1	CRISPRCasFinder	no		cas3,DEDDh,DinG	Orphan	ATAGGGGATTTACCCACTACAAATATTATAGAG	33	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG	NA,NA	NA|214aa|up_9|NC_017769.2_1111095_1111737_-	COG2344, COG2344, AT-rich DNA-binding protein [General function prediction only]	NA|72aa|up_8|NC_017769.2_1111819_1112035_-	pfam15507, DUF4649, Domain of unknown function (DUF4649)	NA|116aa|up_7|NC_017769.2_1112042_1112390_-	pfam08866, DUF1831, Putative amino acid metabolism	NA|372aa|up_6|NC_017769.2_1112394_1113510_-	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]	NA|320aa|up_5|NC_017769.2_1113519_1114479_-	PRK02458, PRK02458, ribose-phosphate pyrophosphokinase; Provisional	NA|190aa|up_4|NC_017769.2_1114591_1115161_-	COG4116, COG4116, Uncharacterized protein conserved in bacteria [Function unknown]	NA|224aa|up_3|NC_017769.2_1115288_1115960_+	COG2357, COG2357, PpGpp synthetase catalytic domain [General function prediction only]	NA|273aa|up_2|NC_017769.2_1115943_1116762_+	PRK04885, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional	NA|299aa|up_1|NC_017769.2_1116758_1117655_+	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|325aa|up_0|NC_017769.2_1117698_1118673_+	PRK09653, eutD, phosphotransacetylase	NA|100aa|down_0|NC_017769.2_1120565_1120865_-	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein	NA|233aa|down_1|NC_017769.2_1121266_1121965_+	COG3619, COG3619, Predicted membrane protein [Function unknown]	NA|105aa|down_2|NC_017769.2_1122152_1122467_+	PRK05573, rplU, 50S ribosomal protein L21; Validated	NA|115aa|down_3|NC_017769.2_1122482_1122827_+	COG2868, COG2868, Predicted ribosomal protein [Translation, ribosomal structure and biogenesis]	NA|98aa|down_4|NC_017769.2_1122843_1123137_+	PRK05435, rpmA, 50S ribosomal protein L27; Validated	NA|306aa|down_5|NC_017769.2_1123984_1124902_+	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase	NA|283aa|down_6|NC_017769.2_1124994_1125843_-	COG1284, COG1284, Uncharacterized conserved protein [Function unknown]	NA|280aa|down_7|NC_017769.2_1125984_1126824_+	TIGR00762, DegV, EDD domain protein, DegV family	NA|92aa|down_8|NC_017769.2_1126930_1127206_+	cd13831, HU, histone-like DNA-binding protein HU	NA|634aa|down_9|NC_017769.2_1127632_1129534_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
GCF_000251085.2_ASM25108v2	NC_017769	Streptococcus pneumoniae ST556, complete sequence	2	1449629-1449761	2	CRISPRCasFinder	no		cas3,DEDDh,DinG	Orphan	ACTTCTGGTGTCGGTACATTTGGTG	25	0	0	NA	NA	NA	2	2	Orphan	cas3,DEDDh,DinG	NA,NA|532aa|down_3|NC_017769.2_1457850_1459446_-	NA|120aa|up_9|NC_017769.2_1441691_1442051_-	PRK07252, PRK07252, S1 RNA-binding domain-containing protein	NA|467aa|up_8|NC_017769.2_1442052_1443453_-	COG0652, PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones]	NA|80aa|up_7|NC_017769.2_1443747_1443987_-	PRK00391, rpsR, 30S ribosomal protein S18; Reviewed	NA|157aa|up_6|NC_017769.2_1444018_1444489_-	PRK07275, PRK07275, single-stranded DNA-binding protein; Provisional	NA|97aa|up_5|NC_017769.2_1444500_1444791_-	PRK00453, rpsF, 30S ribosomal protein S6; Reviewed	NA|449aa|up_4|NC_017769.2_1444943_1446290_-	PRK03932, asnC, asparaginyl-tRNA synthetase; Validated	NA|75aa|up_3|NC_017769.2_1446446_1446671_-	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|396aa|up_2|NC_017769.2_1446663_1447851_-	PRK05764, PRK05764, aspartate aminotransferase; Provisional	NA|163aa|up_1|NC_017769.2_1447847_1448336_-	COG5353, COG5353, Uncharacterized protein conserved in bacteria [Function unknown]	NA|183aa|up_0|NC_017769.2_1448656_1449205_+	COG0431, COG0431, Predicted flavoprotein [General function prediction only]	NA|495aa|down_0|NC_017769.2_1455278_1456763_+	pfam08270, PRD_Mga, M protein trans-acting positive regulator (MGA) PRD domain	NA|243aa|down_1|NC_017769.2_1456813_1457542_-	PRK02101, PRK02101, peroxide stress protein YaaA	NA|55aa|down_2|NC_017769.2_1457620_1457785_-	pfam13129, DUF3953, Protein of unknown function (DUF3953)	NA|532aa|down_3|NC_017769.2_1457850_1459446_-	NA	NA|137aa|down_4|NC_017769.2_1459457_1459868_-	PRK09218, PRK09218, peptide deformylase; Validated	NA|264aa|down_5|NC_017769.2_1459983_1460775_-	PRK11752, PRK11752, putative S-transferase; Provisional	NA|899aa|down_6|NC_017769.2_1460787_1463484_-	cd02089, P-type_ATPase_Ca_prok, prokaryotic P-type Ca(2+)-ATPase similar to Synechococcus elongatus sp	NA|395aa|down_7|NC_017769.2_1463787_1464972_+	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]	NA|624aa|down_8|NC_017769.2_1465114_1466986_-	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|395aa|down_9|NC_017769.2_1466982_1468167_-	PRK13299, PRK13299, tRNA CCA-pyrophosphorylase; Provisional
