assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000245535.1_ASM24553v1	NC_016832	Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12, complete sequence	1	2439042-2439245	1	CRISPRCasFinder	no		c2c9_V-U4,cas3,DEDDh,DinG,WYL,RT,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	Orphan	GCTTCGCGTCGCCATCCGGCAGTCACAAAACAGTACCCGTCCGTAGG	47	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,DEDDh,DinG,WYL,RT,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	NA,NA	NA|834aa|up_9|NC_016832.1_2424231_2426733_+	PRK10671, copA, copper-exporting P-type ATPase CopA	NA|279aa|up_8|NC_016832.1_2427086_2427923_+	pfam07007, LprI, Lysozyme inhibitor LprI	NA|265aa|up_7|NC_016832.1_2427999_2428794_+	COG3735, COG3735, Uncharacterized protein conserved in bacteria [Function unknown]	NA|160aa|up_6|NC_016832.1_2428994_2429474_+	PRK10670, PRK10670, Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK	NA|407aa|up_5|NC_016832.1_2431414_2432635_+	cd17478, MFS_FsR, Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters	NA|559aa|up_4|NC_016832.1_2432849_2434526_+	PRK10669, PRK10669, putative cation:proton antiport protein; Provisional	NA|435aa|up_3|NC_016832.1_2434574_2435879_-	PRK15074, PRK15074, inosine/guanosine kinase; Provisional	NA|324aa|up_2|NC_016832.1_2436031_2437003_+	PRK10162, PRK10162, acetyl esterase	NA|321aa|up_1|NC_016832.1_2436999_2437962_-	PRK00035, hemH, ferrochelatase; Reviewed	NA|215aa|up_0|NC_016832.1_2438191_2438836_-	PRK00279, adk, adenylate kinase; Reviewed	NA|625aa|down_0|NC_016832.1_2439350_2441225_-	PRK05218, PRK05218, heat shock protein 90; Provisional	NA|202aa|down_1|NC_016832.1_2441335_2441941_-	PRK00076, recR, recombination protein RecR; Reviewed	NA|110aa|down_2|NC_016832.1_2441940_2442270_-	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein	NA|643aa|down_3|NC_016832.1_2442315_2444244_-	PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated	NA|184aa|down_4|NC_016832.1_2444357_2444909_-	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional	NA|126aa|down_5|NC_016832.1_2445061_2445439_-	PRK10527, PRK10527, DUF454 family protein	NA|56aa|down_6|NC_016832.1_2446048_2446216_+	PRK11038, PRK11038, hypothetical protein; Provisional	NA|308aa|down_7|NC_016832.1_2446285_2447209_+	pfam04754, Transposase_31, Putative transposase, YhgA-like	NA|1121aa|down_8|NC_016832.1_2447250_2450613_-	PRK11281, PRK11281, mechanosensitive channel MscK	NA|218aa|down_9|NC_016832.1_2450731_2451385_-	PRK10668, PRK10668, DNA-binding transcriptional repressor AcrR; Provisional
GCF_000245535.1_ASM24553v1	NC_016832	Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12, complete sequence	2	2900675-2901095	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	c2c9_V-U4,cas3,DEDDh,DinG,WYL,RT,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	6,6,5	6	TypeI-E	c2c9_V-U4,cas3,DEDDh,DinG,WYL,RT,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	NA,NA	NA|254aa|up_9|NC_016832.1_2892541_2893303_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_8|NC_016832.1_2893283_2894333_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_7|NC_016832.1_2894329_2894809_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_6|NC_016832.1_2894808_2895519_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_5|NC_016832.1_2895537_2895849_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|108aa|up_4|NC_016832.1_2896039_2896363_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_3|NC_016832.1_2896413_2897019_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|480aa|up_2|NC_016832.1_2897005_2898445_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_1|NC_016832.1_2898454_2899363_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|349aa|up_0|NC_016832.1_2899613_2900660_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	cas2|98aa|down_0|NC_016832.1_2901179_2901473_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|306aa|down_1|NC_016832.1_2901475_2902393_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|235aa|down_2|NC_016832.1_2902392_2903097_-	cd09664, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas5|242aa|down_3|NC_016832.1_2903096_2903822_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|353aa|down_4|NC_016832.1_2903831_2904890_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|201aa|down_5|NC_016832.1_2904912_2905515_-	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas8e|512aa|down_6|NC_016832.1_2905531_2907067_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	NA|318aa|down_7|NC_016832.1_2910505_2911459_+	PRK15379, PRK15379, type III secretion system effector SopD	NA|245aa|down_8|NC_016832.1_2911546_2912281_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|571aa|down_9|NC_016832.1_2912356_2914069_-	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit
