bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	4.1|810378|34|NC_016912|CRISPRCasFinder	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	100.00	34	0	0	1	34	1290448	1290415	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	4e-10	55.5	1.0	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT	1290415-1290448	ATGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	0
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	4.1|810378|34|NC_016912|CRISPRCasFinder	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	100.00	34	0	0	1	34	1378857	1378890	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	4e-10	55.5	1.0	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT	1378857-1378890	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT	0
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	5.1|859239|26|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	96.15	26	1	0	1	26	767103	767078	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	1e-05	39.6	1.0	CGGGGCCCCAACACAGAGGCTGGCGG	767078-767103	CCGCCAGCTTCTGTGTTGGGGCCCCG	1
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	5.1|859239|26|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	96.15	26	1	0	1	26	859183	859208	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	1e-05	39.6	1.0	CGGGGCCCCAACACAGAGGCTGGCGG	859183-859208	CGGGGCCCCAACACAGAGGCTGGTGG	1
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	5.1|859239|26|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	92.31	26	2	0	1	26	730497	730522	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	1e-04	36.5	1.0	CGGGGCCCCAACACAGAGGCTGGCGG	730497-730522	CGGGGCCCCAACACAGAAGCAGGCGG	2
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	5.1|859239|26|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	92.31	26	2	0	1	26	1077380	1077405	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	1e-04	36.5	1.0	CGGGGCCCCAACACAGAGGCTGGCGG	1077380-1077405	CGGGGCCCCAACATAGAAGCTGGCGG	2
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	5.1|859239|26|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	92.31	26	2	0	1	26	2650033	2650008	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	1e-04	36.5	1.0	CGGGGCCCCAACACAGAGGCTGGCGG	2650008-2650033	CCGCCAGCTTCTATGTTGGGGCCCCG	2
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	5.1|859239|26|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	92.31	26	2	0	1	26	2650089	2650064	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	1e-04	36.5	1.0	CGGGGCCCCAACACAGAGGCTGGCGG	2650064-2650089	CCGCCAGCTTCTTTGTTGGGGCCCCG	2
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	5.3|859353|26|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	96.15	26	1	0	1	26	767159	767134	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	1e-05	39.6	1.0	CGGGGCCCCAACACAGAAGCTGGCGA	767134-767159	TCGTCAGCTTCTGTGTTGGGGCCCCG	1
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	5.3|859353|26|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	96.15	26	1	0	1	26	767215	767190	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	1e-05	39.6	1.0	CGGGGCCCCAACACAGAAGCTGGCGA	767190-767215	TCGTCAGCTTCTGTGTTGGGGCCCCG	1
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	5.3|859353|26|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	92.31	26	2	0	1	26	336798	336823	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	1e-04	36.5	1.0	CGGGGCCCCAACACAGAAGCTGGCGA	336798-336823	CGGGGCCCCAACAAAGAAGCTGACGA	2
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	7.1|1734151|21|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	95.24	21	1	0	1	21	1734092	1734112	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	0.003	31.7	1.0	AGCTGGCCAATAGTCAGCTTT	1734092-1734112	AGCTGGCCAATAGTTAGCTTT	1
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	7.2|1734210|20|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	100.00	20	0	0	1	20	115356	115375	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	0.001	33.3	1.0	GAATTTCGAAAAGAAATTCT	115356-115375	GAATTTCGAAAAGAAATTCT	0
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	7.2|1734210|20|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	100.00	20	0	0	1	20	258555	258574	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	0.001	33.3	1.0	GAATTTCGAAAAGAAATTCT	258555-258574	GAATTTCGAAAAGAAATTCT	0
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	7.2|1734210|20|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	100.00	20	0	0	1	20	336929	336948	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	0.001	33.3	1.0	GAATTTCGAAAAGAAATTCT	336929-336948	GAATTTCGAAAAGAAATTCT	0
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	7.2|1734210|20|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	100.00	20	0	0	1	20	761651	761632	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	0.001	33.3	1.0	GAATTTCGAAAAGAAATTCT	761632-761651	AGAATTTCTTTTCGAAATTC	0
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	7.2|1734210|20|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	100.00	20	0	0	1	20	761706	761687	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	0.001	33.3	1.0	GAATTTCGAAAAGAAATTCT	761687-761706	AGAATTTCTTTTCGAAATTC	0
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	7.2|1734210|20|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	100.00	20	0	0	1	20	767312	767293	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	0.001	33.3	1.0	GAATTTCGAAAAGAAATTCT	767293-767312	AGAATTTCTTTTCGAAATTC	0
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	7.2|1734210|20|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	100.00	20	0	0	1	20	767370	767351	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	0.001	33.3	1.0	GAATTTCGAAAAGAAATTCT	767351-767370	AGAATTTCTTTTCGAAATTC	0
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	7.2|1734210|20|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	100.00	20	0	0	1	20	767428	767409	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	0.001	33.3	1.0	GAATTTCGAAAAGAAATTCT	767409-767428	AGAATTTCTTTTCGAAATTC	0
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	7.2|1734210|20|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	100.00	20	0	0	1	20	810451	810432	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	0.001	33.3	1.0	GAATTTCGAAAAGAAATTCT	810432-810451	AGAATTTCTTTTCGAAATTC	0
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	7.2|1734210|20|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	100.00	20	0	0	1	20	878909	878890	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	0.001	33.3	1.0	GAATTTCGAAAAGAAATTCT	878890-878909	AGAATTTCTTTTCGAAATTC	0
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	7.2|1734210|20|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	100.00	20	0	0	1	20	1002895	1002876	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	0.001	33.3	1.0	GAATTTCGAAAAGAAATTCT	1002876-1002895	AGAATTTCTTTTCGAAATTC	0
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	7.2|1734210|20|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	100.00	20	0	0	1	20	1290316	1290335	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	0.001	33.3	1.0	GAATTTCGAAAAGAAATTCT	1290316-1290335	GAATTTCGAAAAGAAATTCT	0
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	7.2|1734210|20|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	100.00	20	0	0	1	20	1378989	1378970	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	0.001	33.3	1.0	GAATTTCGAAAAGAAATTCT	1378970-1378989	AGAATTTCTTTTCGAAATTC	0
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	7.2|1734210|20|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	100.00	20	0	0	1	20	1555353	1555334	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	0.001	33.3	1.0	GAATTTCGAAAAGAAATTCT	1555334-1555353	AGAATTTCTTTTCGAAATTC	0
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	7.2|1734210|20|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	100.00	20	0	0	1	20	1734037	1734056	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	0.001	33.3	1.0	GAATTTCGAAAAGAAATTCT	1734037-1734056	GAATTTCGAAAAGAAATTCT	0
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	7.2|1734210|20|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	100.00	20	0	0	1	20	1892346	1892327	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	0.001	33.3	1.0	GAATTTCGAAAAGAAATTCT	1892327-1892346	AGAATTTCTTTTCGAAATTC	0
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	7.2|1734210|20|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	100.00	20	0	0	1	20	2398779	2398798	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	0.001	33.3	1.0	GAATTTCGAAAAGAAATTCT	2398779-2398798	GAATTTCGAAAAGAAATTCT	0
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	7.2|1734210|20|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	100.00	20	0	0	1	20	2650127	2650108	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	0.001	33.3	1.0	GAATTTCGAAAAGAAATTCT	2650108-2650127	AGAATTTCTTTTCGAAATTC	0
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	7.2|1734210|20|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	95.00	20	1	0	1	20	258609	258628	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	0.009	30.1	1.0	GAATTTCGAAAAGAAATTCT	258609-258628	GAAATTCGAAAAGAAATTCT	1
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	7.2|1734210|20|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	95.00	20	1	0	1	20	774518	774499	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	0.009	30.1	1.0	GAATTTCGAAAAGAAATTCT	774499-774518	AGAATTTCATTTCGAAATTC	1
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	7.2|1734210|20|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	95.00	20	1	0	1	20	1077342	1077361	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	0.009	30.1	1.0	GAATTTCGAAAAGAAATTCT	1077342-1077361	GAATTTCAAAAAGAAATTCT	1
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	7.2|1734210|20|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	95.00	20	1	0	1	20	1339661	1339642	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	0.009	30.1	1.0	GAATTTCGAAAAGAAATTCT	1339642-1339661	AGAATTTCTTTTCGAAAATC	1
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	7.2|1734210|20|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	95.00	20	1	0	1	20	1589319	1589300	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	0.009	30.1	1.0	GAATTTCGAAAAGAAATTCT	1589300-1589319	AGAATTTCTTTACGAAATTC	1
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	7.2|1734210|20|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	95.00	20	1	0	1	20	1901695	1901676	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	0.009	30.1	1.0	GAATTTCGAAAAGAAATTCT	1901676-1901695	AGAATTTCCTTTCGAAATTC	1
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	7.2|1734210|20|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	90.00	20	2	0	1	20	735097	735116	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	0.083	26.9	1.0	GAATTTCGAAAAGAAATTCT	735097-735116	GAATTTCAAAAAGGAATTCT	2
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	7.3|1734268|18|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	94.44	18	1	0	1	18	1734095	1734112	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	0.083	26.9	1.0	TGGCCAATAGTCAGCTTT	1734095-1734112	TGGCCAATAGTTAGCTTT	1
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	8.1|1890920|33|NC_016912|CRISPRCasFinder	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	96.97	33	1	0	1	33	767114	767146	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	1e-08	50.7	1.0	CATTATCGTAAGCTGACTTTTCGTCAGCTTCTG	767114-767146	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	1
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	8.1|1890920|33|NC_016912|CRISPRCasFinder	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	96.97	33	1	0	1	33	767170	767202	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	1e-08	50.7	1.0	CATTATCGTAAGCTGACTTTTCGTCAGCTTCTG	767170-767202	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	1
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	8.1|1890920|33|NC_016912|CRISPRCasFinder	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	96.97	33	1	0	1	33	1290402	1290370	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	1e-08	50.7	1.0	CATTATCGTAAGCTGACTTTTCGTCAGCTTCTG	1290370-1290402	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	1
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	8.1|1890920|33|NC_016912|CRISPRCasFinder	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	96.97	33	1	0	1	33	1555383	1555415	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	1e-08	50.7	1.0	CATTATCGTAAGCTGACTTTTCGTCAGCTTCTG	1555383-1555415	CATTATAGTAAGCTGACTTTTCGTCAGCTTCTG	1
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	8.1|1890920|33|NC_016912|CRISPRCasFinder	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	96.97	33	1	0	1	33	2484733	2484765	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	1e-08	50.7	1.0	CATTATCGTAAGCTGACTTTTCGTCAGCTTCTG	2484733-2484765	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	1
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	8.1|1890920|33|NC_016912|CRISPRCasFinder	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	93.94	33	2	0	1	33	1378903	1378935	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	9e-08	47.5	1.0	CATTATCGTAAGCTGACTTTTCGTCAGCTTCTG	1378903-1378935	CATTATTGTAAGCTGACTTTTCGTCATCTTCTG	2
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	10.1|2207022|33|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	93.94	33	2	0	1	33	767114	767146	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	9e-08	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	767114-767146	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	10.1|2207022|33|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	93.94	33	2	0	1	33	767170	767202	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	9e-08	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	767170-767202	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	10.1|2207022|33|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	93.94	33	2	0	1	33	1290402	1290370	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	9e-08	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	1290370-1290402	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	2
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	10.1|2207022|33|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	93.94	33	2	0	1	33	1378903	1378935	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	9e-08	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	1378903-1378935	CATTATTGTAAGCTGACTTTTCGTCATCTTCTG	2
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	10.1|2207022|33|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	93.94	33	2	0	1	33	2484733	2484765	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	9e-08	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	2484733-2484765	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	10.2|2207078|36|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	100.00	36	0	0	1	36	1077373	1077338	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	6e-11	58.6	1.0	TGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTA	1077338-1077373	TAGAGAATTTCAAAAAGAAATTCTACAGACAATGCA	0
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	10.2|2207078|36|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	97.22	36	1	0	1	36	1734068	1734033	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	5e-10	55.5	1.0	TGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTA	1734033-1734068	TAGAGAATTTCGAAAAGAAATTCTACAGACAATGCA	1
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	10.2|2207078|36|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	94.44	36	2	0	1	36	1555322	1555357	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	5e-09	52.3	1.0	TGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTA	1555322-1555357	TGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTA	2
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	10.2|2207078|36|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	94.44	36	2	0	1	36	1901664	1901699	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	5e-09	52.3	1.0	TGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTA	1901664-1901699	TGCATTGTCTGTAGAATTTCCTTTCGAAATTCTCTA	2
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	10.3|2207137|33|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	93.94	33	2	0	1	33	767058	767090	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	9e-08	47.5	1.0	CATTATTGTAAGCTGACTTTCTGTCAGCTTCTG	767058-767090	CATTATTGTAAGCTGACTTTCCGCCAGCTTCTG	2
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	10.3|2207137|33|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	93.94	33	2	0	1	33	767114	767146	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	9e-08	47.5	1.0	CATTATTGTAAGCTGACTTTCTGTCAGCTTCTG	767114-767146	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	10.3|2207137|33|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	93.94	33	2	0	1	33	767170	767202	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	9e-08	47.5	1.0	CATTATTGTAAGCTGACTTTCTGTCAGCTTCTG	767170-767202	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	10.3|2207137|33|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	93.94	33	2	0	1	33	1290402	1290370	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	9e-08	47.5	1.0	CATTATTGTAAGCTGACTTTCTGTCAGCTTCTG	1290370-1290402	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	2
NC_016912	Staphylococcus aureus subsp. aureus VC40, complete sequence	10.3|2207137|33|NC_016912|CRT	NC_016912.1	Staphylococcus aureus subsp. aureus VC40, complete sequence	93.94	33	2	0	1	33	2484733	2484765	375411-375511|604864-604956|668124-668222|810354-810435|859209-859491|992893-992980|1734113-1734323|1890897-1890975|2082977-2083066|2206999-2207192	9e-08	47.5	1.0	CATTATTGTAAGCTGACTTTCTGTCAGCTTCTG	2484733-2484765	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
